prot_L-elsbetiae_contig1021.255.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1021.255.1
Unique Nameprot_L-elsbetiae_contig1021.255.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length371
Homology
BLAST of mRNA_L-elsbetiae_contig1021.255.1 vs. uniprot
Match: A0A6H5KV61_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV61_9PHAE)

HSP 1 Score: 343 bits (881), Expect = 1.490e-105
Identity = 221/327 (67.58%), Postives = 239/327 (73.09%), Query Frame = 0
Query:   21 VGKPLDG-----DXXXXXXXXXPRDEVDILAAATARLHLESGVHDGEGGGDVDGEHSREGH-HASPVGDDEQXXXXXXXXXXXXXXXXXXXXXXKFGLKVLVPGITAGCLIGKGGKIINQLQTATGTRVKLSQKNEFFPGTHDRVALVQGEDPNMVAEAVAEMLRRLREAARPNP--------------HDGFGGLGGGGLDGPHGRNAQVTIRLLVPLAAGGLIIGRGGETIKAIGARTGARVILAGKDADVAGVPSERLCSIQADLESAIKVMFLIVGKMAEDRGLSKYQSNQTCYQTGLSAGSPGMGGDGSTDGSQHQ--HPQL 325
            VG P+DG     +           D    LA ATAR+HL +  H+        G   +EGH H    GD E+         XXXXXXXXXXXXXKF LKVLVPGITAGCLIGKGGKIINQ+QT T TRVKLSQKNEFFPGTHDRVALVQGE P +VAEAVAEMLRRLREAARP P              HDG+G    GGLD P+GR+AQV IRLLVPLAAGGLIIGRGGETIKAIGARTGARVILAGKDADVAGVPSERLCSIQADLE AIKV+FLIVGKMAEDRGLS   +NQTCYQTGLS G+P +GGDGS DG Q+Q  HP +
Sbjct:  105 VGSPVDGALTTVEGTQQGGGSARGDVCSSLAEATARMHL-ADPHE-------KGSDEKEGHEHLLSGGDGEEKQDWSQGDEXXXXXXXXXXXXXKFALKVLVPGITAGCLIGKGGKIINQIQTNTNTRVKLSQKNEFFPGTHDRVALVQGEQPTLVAEAVAEMLRRLREAARPTPQAPFMGGGVPYSTVHDGYGS---GGLDEPYGRDAQVMIRLLVPLAAGGLIIGRGGETIKAIGARTGARVILAGKDADVAGVPSERLCSIQADLEGAIKVVFLIVGKMAEDRGLS---NNQTCYQTGLSLGAPVVGGDGSIDGGQYQFQHPTM 417          
BLAST of mRNA_L-elsbetiae_contig1021.255.1 vs. uniprot
Match: D7FM83_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM83_ECTSI)

HSP 1 Score: 269 bits (687), Expect = 6.460e-85
Identity = 162/241 (67.22%), Postives = 169/241 (70.12%), Query Frame = 0
Query:   40 DEVDILAAATARLHLESGVHDGEGGGDVDGEHSREGH-HASPVGDDEQXXXXXXXXXXXXXXXXXXXXXXKFGLKVLVPGITAGCLIGKGGKIINQLQTATGTRVKLSQKNEFFPGTHDRVALVQGEDPNMVAEAVAEMLRRLREAARPNPHDGF-----------GGLGGGGLDGPHGRNAQVTIRLLVPLAAGGLIIGRGGETIKAIGARTGARVILAGKDADVAGVPSERLCSIQADL 268
            D    LA ATAR+HL     D   GGD +     EGH H    GD E+                      KF LKVLVPGITAGCLIGKGGKIINQ+QT T TRVKLSQKNEFFPGTHDRVALVQGE P +VAEAVAEMLRRLREAARP P   F            G G GGLDGPHGR+AQVTIRLLVPLAAGGLIIGRGGETIKAIGARTGARVILAGKDADVAGVPSERLCSIQ  +
Sbjct:   62 DVCGSLAEATARMHLA----DPHEGGDEE-----EGHDHLLSGGDGEEKQDWSQGDEDREEREREPQP--KFALKVLVPGITAGCLIGKGGKIINQIQTNTNTRVKLSQKNEFFPGTHDRVALVQGEQPTLVAEAVAEMLRRLREAARPTPQAPFMGGGVPYSTVHEGYGSGGLDGPHGRDAQVTIRLLVPLAAGGLIIGRGGETIKAIGARTGARVILAGKDADVAGVPSERLCSIQPSM 291          
BLAST of mRNA_L-elsbetiae_contig1021.255.1 vs. uniprot
Match: A0A7S2UYD0_9STRA (Hypothetical protein (Fragment) n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYD0_9STRA)

HSP 1 Score: 135 bits (340), Expect = 3.060e-34
Identity = 81/201 (40.30%), Postives = 112/201 (55.72%), Query Frame = 0
Query:  110 FGLKVLVPGITAGCLIGKGGKIINQLQTATGTRVKLSQKNEFFPGTHDRVALVQGEDPNMVAEAVAEMLRRLREAARPNPHDGFGGLGGGGLDGPHGRNAQVTIRLLVPLAAGGLIIGRGGETIKAIGARTGARVILAGKDADVAGVPSERLCSIQADLESAIKVMFLIVGKMAEDRGLSKYQSNQTCYQTGLSAGSPGMG 310
            F +K+ +PG  AGC+IGKGG +I  LQ  T TR+KLS    FFPG+ +RV L  G+ P+ V  A+ E++ R+ E  +    D           G H  N ++ + +LVP AA G +IG+GGE +KAI A +G +V +A KD      PSER C I  +      VM   V ++ EDR LSKYQ+  T Y    + G+ G G
Sbjct:   27 FTIKITIPGYLAGCIIGKGGSVITDLQARTSTRIKLSAARAFFPGSSNRVLLCTGK-PDAVKTALTEIVSRVEENFKTKNADSS-------ASGEHPVNKELQMGVLVPQAASGCVIGKGGEVMKAIQASSGCKVQMAQKDQ--MSYPSERPCDITGEAAGIAGVMCTFVDRLLEDRDLSKYQNPSTNYTPRTAGGAAGGG 217          
BLAST of mRNA_L-elsbetiae_contig1021.255.1 vs. uniprot
Match: A0A835YS36_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS36_9STRA)

HSP 1 Score: 135 bits (339), Expect = 4.290e-33
Identity = 78/186 (41.94%), Postives = 111/186 (59.68%), Query Frame = 0
Query:  113 KVLVPGITAGCLIGKGGKIINQLQTATGTRVKLSQKNEFFPGTHDRVALVQGEDPNMVAEAVAEMLRRLREAARPNPHDGFGGLGGGGLDGPHGRNAQVTIRLLVPLAAGGLIIGRGGETIKAIGARTGARVILAGKDADVAGVPSERLCSIQADLESAIKVMFLIVGKMAEDRGLSKYQSNQTCY 298
            K+L+P   +GC+IGK           TGT++KLSQ +EFFPGT++RV LV GE P+ V +AVAE+LRR  E  R   H             P  +      R ++P+AA GLIIGRGGET+KA+G +TGARV LA K      + +ER+C++   ++  ++V   ++ KMA++  LSKY +  T Y
Sbjct:   52 KMLIPSHVSGCIIGKA---------LTGTKIKLSQNSEFFPGTNERVVLVMGE-PDAVRKAVAEVLRRTSEGLRAIKHQSSSS--------PTAKKPGALFRAVLPMAAAGLIIGRGGETVKALGQQTGARVQLANKAQ--CPIATERICTVTGSMQGVLEVASFMIEKMAQEPVLSKYANPSTSY 217          
BLAST of mRNA_L-elsbetiae_contig1021.255.1 vs. uniprot
Match: A0A7S2XVB9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVB9_9STRA)

HSP 1 Score: 118 bits (295), Expect = 7.040e-28
Identity = 73/189 (38.62%), Postives = 104/189 (55.03%), Query Frame = 0
Query:  110 FGLKVLVPGITAGCLIGKGGKIINQLQTATGTRVKLSQKNEFFPGTHDRVALVQGEDPNMVAEAVAEMLRRLREAARPNPHDGFGGLGGGGLDGPHGRNAQVTIRLLVPLAAGGLIIGRGGETIKAIGARTGARVILAGKDADVAGVPSERLCSIQADLESAIKVMFLIVGKMAEDRGLSKYQSNQTCY 298
            F +K+L+PG  AGC+IGKGG +I  LQ  T T +++S   ++FPGT+DRV +  G   N V  A+ E++ R+ E  +            G  DG    + +  I + +P AA G IIGRGGE +KAI A +G +V LA KD      PSER  +I  D      V+   + ++  DRGL +YQ+  T Y
Sbjct:   22 FSIKLLIPGFLAGCVIGKGGSVITDLQARTSTTIRMSSNRDYFPGTNDRVLMCTGVTDN-VKTAITEIISRVEENFKSK----------GTKDGEPSSD-EFNIGVSLPSAAAGCIIGRGGEVMKAIQASSGCKVRLASKDELT--YPSERPATITGDAVGIAGVVCAFMDRLLSDRGLCEYQNPGTNY 196          
BLAST of mRNA_L-elsbetiae_contig1021.255.1 vs. uniprot
Match: A0A7S1BNP4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BNP4_9STRA)

HSP 1 Score: 122 bits (306), Expect = 1.360e-27
Identity = 79/207 (38.16%), Postives = 116/207 (56.04%), Query Frame = 0
Query:  112 LKVLVPGITAGCLIGKGGKIINQLQTATGTRVKLSQKNEFFPGTHDRVALVQGEDPNMVAEAVAEMLRRLREAARPNPHDGFGGLGGGGLDGP-------HGRNAQVTIRLLVPLAAGGLIIGRGGETIKAIGARTGARVILAGKDADVAGVPSERLCSIQADLESAIKVMFLIVGKMAEDRGLSKYQSNQTCYQTGLSAGSPGMGG 311
            LKVL+    AG +IG+ G+ I+ LQ  +G R+KLSQ  + FPGT +RV L+QGE  N V EAVA +L ++R+A      +G G     G D           R++   I++LVP  A G++IGRGG  IK+I   +GAR+ LA KD   +   SER+ +I  DL      + L++  + E+  L++Y +  T Y   ++  S  MGG
Sbjct:  155 LKVLLSNNLAGSIIGRNGQSISDLQARSGCRIKLSQSGDTFPGTGERVCLIQGEGVNAVREAVALVLAKVRDAK-----EGQGEFAEDGTDSADVSSRQQRTRSSTYVIKVLVPSPACGMLIGRGGSNIKSISESSGARIQLASKDEAASVATSERVVTITGDLGCCTSCIGLVLDSLHENPELARYANMTTSYSRAMA--SSAMGG 354          
BLAST of mRNA_L-elsbetiae_contig1021.255.1 vs. uniprot
Match: A0A7S1HMQ6_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HMQ6_HEMAN)

HSP 1 Score: 109 bits (272), Expect = 4.710e-24
Identity = 66/190 (34.74%), Postives = 107/190 (56.32%), Query Frame = 0
Query:  110 FGLKVLVPGITAGCLIGKGGKIINQLQTATGTRVKLSQKNEFFPGTHDRVALVQGEDPNMVAEAVAEMLRRLREAARPNPHDGFGGLGGGGLDGPHGRNAQVTIRLLVPLAAGGLIIGRGGETIKAIGARTGARVILAGKDADVAGVPSERLCSIQADLESAIKVMFLIVGKMAEDRGLSKYQSNQTCYQ 299
            F +K+LV    AG +IG+GG+ I+ +Q+ TG+R+++S  NE+FP T DRV L+ GE PN V E V  +L  +   A    +D              G   Q+ ++LL+P  + G +IG+GGE IK +   +GA++ L  K+  V GV  ER+ ++Q  +   +K    +V K+AED  +  + ++ T Y+
Sbjct:   72 FAMKLLVNNKDAGTVIGRGGQTISSMQSKTGSRIRVSNANEYFPNTQDRVVLITGE-PNSVTEGVKSVLEEVFCNAESLQNDA-----------QSGEERQILLKLLIPNNSAGSVIGKGGECIKKMQEESGAKIQLTTKEQQVPGV-DERILTVQGSVSCIVKGAEQVVRKIAEDPSVG-FTNHTTNYR 247          
BLAST of mRNA_L-elsbetiae_contig1021.255.1 vs. uniprot
Match: D7FM84_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM84_ECTSI)

HSP 1 Score: 105 bits (263), Expect = 1.270e-23
Identity = 74/121 (61.16%), Postives = 82/121 (67.77%), Query Frame = 0
Query:  258 SERLCSIQADLESAIKVMFLIVGKMAEDRGLSKYQSNQTCYQTGLSAGSPGMGGDGSTDGSQH--QHPQLHPMHAGHSASTAFMQQQPQASWSAAG-RAGANN-------PNAGFGGGGPL 368
            SE L S  ADLE AIKV+FLIVGKMAEDRGLSKYQSNQTCYQTGLS+G+P MGGDGS DG Q+  QHP +    AG++      QQQPQ  W  +G R G N           GFGGGGPL
Sbjct:    9 SEPLAS--ADLEGAIKVVFLIVGKMAEDRGLSKYQSNQTCYQTGLSSGAPVMGGDGSIDGGQYHFQHPAM--AAAGNNPFAHQHQQQPQ--WGGSGGRQGLNRGVGDVGGAAPGFGGGGPL 123          
BLAST of mRNA_L-elsbetiae_contig1021.255.1 vs. uniprot
Match: A0A7S2UYP3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYP3_9STRA)

HSP 1 Score: 105 bits (262), Expect = 9.940e-23
Identity = 90/241 (37.34%), Postives = 120/241 (49.79%), Query Frame = 0
Query:  112 LKVLVPGITAGCLIGKGGKIINQLQTATGTRVKLSQKNEFFP-----------GTHDRVALVQGEDPNMVAEAVAEMLRRLREAARPNPHDGFGGLGG---GG---------------LDGPHGRN-----AQVTIRLLVPLAAGGLIIGRGGETIKAIGARTGARVILAGKDADVAGVPSERLCSIQADLESAIKVMFLIVGKMAEDRGLSKYQSNQTCYQTGLSAGSP-GMGGDGSTDG 317
            LK L+P   AG LIG+GG  I  LQ A+G RV+LS +N  FP           G  DRVAL+ GE  + V  A   ++ RL  A         GG GG   GG                 GP   +     A +T+RL+VP +AGGL+IGR G TIK +      R+ L G++  ++ VPSER+ ++Q    + +  + LI+ KMAED   SKYQ     Y+ G   G+  G GG G  DG
Sbjct:   11 LKFLIPTRLAGGLIGQGGVHIAGLQEASGCRVRLSSQNAHFPVAPGAQGQAGSGGGDRVALLTGE-LDQVQRAQDMIVHRLHIAMGEREDRRSGGAGGIKSGGQGEDEDADVPXXXXXXGGPSSSSPLPPDAPMTVRLVVPASAGGLLIGRQGATIKQMSEAAQCRLQLQGRE--LSAVPSERIVTLQGPPANIVAGIDLILNKMAEDPAASKYQILSVTYRRGHVRGATYGGGGGGMIDG 248          
BLAST of mRNA_L-elsbetiae_contig1021.255.1 vs. uniprot
Match: A0A7S0W657_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0W657_9CRYP)

HSP 1 Score: 105 bits (261), Expect = 1.290e-22
Identity = 63/190 (33.16%), Postives = 108/190 (56.84%), Query Frame = 0
Query:  110 FGLKVLVPGITAGCLIGKGGKIINQLQTATGTRVKLSQKNEFFPGTHDRVALVQGEDPNMVAEAVAEMLRRLREAARPNPHDGFGGLGGGGLDGPHGRNAQVTIRLLVPLAAGGLIIGRGGETIKAIGARTGARVILAGKDADVAGVPSERLCSIQADLESAIKVMFLIVGKMAEDRGLSKYQSNQTCYQ 299
            F +K+LV    AG +IG+GG+ I+ +Q  TG+R+++S  NE+FP T DRV L+ GE  N VA+ V  +L  +   A    ++   G              Q+T+++L+P  A G +IG+GGE IK +   +GA++ L  K+  V GV  ER+ ++Q  + + +K    +V +++ED  +  + ++ T Y+
Sbjct:   68 FAMKLLVGNKDAGTVIGRGGQTISSMQAKTGSRIRVSNANEYFPNTQDRVVLITGEVRN-VADGVKNVLEEVFCNAESLQNEAASG-----------EERQITLKMLIPNGAAGSVIGKGGECIKRMQEESGAKIQLTTKEQQVPGV-DERILTVQGPVSAIVKGAEQVVHRISEDPTVG-FTNHTTSYR 243          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1021.255.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KV61_9PHAE1.490e-10567.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FM83_ECTSI6.460e-8567.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2UYD0_9STRA3.060e-3440.30Hypothetical protein (Fragment) n=2 Tax=Fibrocapsa... [more]
A0A835YS36_9STRA4.290e-3341.94Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2XVB9_9STRA7.040e-2838.62Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S1BNP4_9STRA1.360e-2738.16Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A7S1HMQ6_HEMAN4.710e-2434.74Hypothetical protein (Fragment) n=2 Tax=Hemiselmis... [more]
D7FM84_ECTSI1.270e-2361.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2UYP3_9STRA9.940e-2337.34Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S0W657_9CRYP1.290e-2233.16Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004087K Homology domainSMARTSM00322kh_6coord: 209..283
e-value: 6.3E-9
score: 45.7
coord: 108..182
e-value: 1.7E-8
score: 44.3
IPR004088K Homology domain, type 1PFAMPF00013KH_1coord: 113..177
e-value: 2.7E-11
score: 43.1
coord: 212..278
e-value: 1.1E-7
score: 31.5
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10coord: 107..186
e-value: 1.7E-18
score: 68.1
coord: 207..286
e-value: 9.3E-15
score: 56.2
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 200..291
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 112..187
NoneNo IPR availablePANTHERPTHR10288KH DOMAIN CONTAINING RNA BINDING PROTEINcoord: 98..344
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 109..177
score: 14.99
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 210..278
score: 12.328

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1021contigL-elsbetiae_contig1021:4598..12485 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1021.255.1mRNA_L-elsbetiae_contig1021.255.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1021 4598..12486 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1021.255.1 ID=prot_L-elsbetiae_contig1021.255.1|Name=mRNA_L-elsbetiae_contig1021.255.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=371bp
SGDGSASPPASGVISGVDVVVGKPLDGDGGGGGGGGGPRDEVDILAAATA
RLHLESGVHDGEGGGDVDGEHSREGHHASPVGDDEQQQQQQQWQKDESER
EREREPQPKFGLKVLVPGITAGCLIGKGGKIINQLQTATGTRVKLSQKNE
FFPGTHDRVALVQGEDPNMVAEAVAEMLRRLREAARPNPHDGFGGLGGGG
LDGPHGRNAQVTIRLLVPLAAGGLIIGRGGETIKAIGARTGARVILAGKD
ADVAGVPSERLCSIQADLESAIKVMFLIVGKMAEDRGLSKYQSNQTCYQT
GLSAGSPGMGGDGSTDGSQHQHPQLHPMHAGHSASTAFMQQQPQASWSAA
GRAGANNPNAGFGGGGPLPGP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004087KH_dom
IPR004088KH_dom_type_1
IPR036612KH_dom_type_1_sf