mRNA_L-elsbetiae_contig13313.2564.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig13313.2564.1
Unique NamemRNA_L-elsbetiae_contig13313.2564.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13313.2564.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13313contigL-elsbetiae_contig13313:1..1414 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionHypothetical protein
Ec32 orthologEc-00_004600.1
Exons3
Model size408
Cds size408
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13313.2564.1prot_L-elsbetiae_contig13313.2564.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig13313 1..1414 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815506.67769-CDS-L-elsbetiae_contig13313:0..2181622815506.67769-CDS-L-elsbetiae_contig13313:0..218Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13313 1..218 -
1691682931.7640383-CDS-L-elsbetiae_contig13313:0..2181691682931.7640383-CDS-L-elsbetiae_contig13313:0..218Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13313 1..218 -
1622815506.6944842-CDS-L-elsbetiae_contig13313:708..8421622815506.6944842-CDS-L-elsbetiae_contig13313:708..842Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13313 709..842 -
1691682931.7736852-CDS-L-elsbetiae_contig13313:708..8421691682931.7736852-CDS-L-elsbetiae_contig13313:708..842Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13313 709..842 -
1622815506.7079878-CDS-L-elsbetiae_contig13313:1358..14141622815506.7079878-CDS-L-elsbetiae_contig13313:1358..1414Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13313 1359..1414 -
1691682931.787273-CDS-L-elsbetiae_contig13313:1358..14141691682931.787273-CDS-L-elsbetiae_contig13313:1358..1414Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13313 1359..1414 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig13313.2564.1

>prot_L-elsbetiae_contig13313.2564.1 ID=prot_L-elsbetiae_contig13313.2564.1|Name=mRNA_L-elsbetiae_contig13313.2564.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=136bp
GSTDLGADAGLLAGMVRARSARNHLRERGKTKSGSQSSVSTVASTTKSTK
ASGGKKGKSDRGSARDGNHKRGTSPRPSAPRQARASQRLSSGTSASNSAA
AAVAAAVAAAAGAAGGSGGGGGGGGVAAGGDQARES
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mRNA from alignment at L-elsbetiae_contig13313:1..1414-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig13313.2564.1 ID=mRNA_L-elsbetiae_contig13313.2564.1|Name=mRNA_L-elsbetiae_contig13313.2564.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1414bp|location=Sequence derived from alignment at L-elsbetiae_contig13313:1..1414- (Laminarionema elsbetiae ELsaHSoW15)
GGAAGCACGGACCTGGGCGCGGACGCGGGCCTACTTGCTGGAATGGTTCG
AGCGAGGTGAGAGCTGGGTGGGTCGCGGGCGTGGCTCTGCCGCGTGGTGC
AGCCAGCACACGCACGGCCAAAGCGAAAAGGGGGCTGTCTGTTTCTCTGC
CGTGCTCGCGGCATTTTAGAACCTGCTGCCGCGGGTTTGGTGGTGGTGGT
GGTGGTGGTGGTGGCGTTCGAGGGCAGGCAGTGCGATGTTCACGGTATCA
TGGCATCTATCCATCCGTGTATGTACATAGGTGGATATGTCCCTGAAATT
GCTCGGACTGACGACCCTTTTTTGCGGCGAAAACCGAGAAGGTGGGGACG
CCCTCGCCAGCCAACCCGGCTCGCTTGCTGCGGCTTGTGGATTACTATTT
ACATACTGCCAGTACGCGTGCGTGCGTGCGCGCGCGCGTGTGTTATCCTG
TGTGTGTGTGTGTTTTCGTTTTGGGTGCATGCATACGTTGTTTGTTTATC
GTGATCGTTTCGTTTTTGTGTGATTAATCGTTGTCGTCGTCGTCGTCGTC
GTCGTCGGTCGCCGGTGTGCAGGAGCGCCAGGAACCACCTCCGCGAGAGG
GGCAAGACGAAGTCCGGCTCCCAGTCATCGGTGTCCACCGTCGCGTCCAC
GACCAAGAGCACCAAAGCATCCGGCGGGAAGAAAGGAAAATCGGACCGAG
GCTCGGGTAAGCCGGAGCAGGGCGGGAGAAGCGCTGAGGGGTGGGGAGGG
GTGGGAGTTATTCGTGTACTTAAAAAAATTAGGAAGTAAGTTTATGTACC
AAAGACAATGTCGGAGGGAGGTACCTACGTGGTATCTTTGTGTGTGGAGT
GGATCATAACTTTTTTTGTAGATGTGTGCGGAGTAAGGAATCTCGACTCC
GCGGTTCTGCCTGTGGGCGAGTGATGCCAACCACGTCCAGTTTTTCGTCG
GTGTTGAAGCTTCCGCAAGGCAGTGTAAGGTAGAGCCCGTGGGTGTCTAT
TTTGAAGTTGACGTCACTAATGTAACGACTGACTGTCTGATTCATTTTCA
AAGAGTACAAACTTCCGGATCCGGACCCCCCGCCCCCCTCCTTGATGGCT
GCTGCTGCTGCTGCTGCTGCTACTGCTTTTACGCAACGACAAAATGACGT
TCATCGCTTCGCTTGCCTCGAATCTCAACCCCAACCAACTTTTCAGCACG
CGACGGTAACCACAAGCGCGGGACTTCTCCGCGCCCCAGCGCGCCGCGCC
AGGCGAGAGCCTCCCAGCGGCTGTCCAGCGGCACGTCCGCGTCGAACTCG
GCAGCGGCGGCGGTGGCGGCGGCGGTGGCGGCGGCGGCGGGGGCGGCCGG
GGGCAGCGGCGGCGGCGGCGGCGGCGGCGGGGTCGCTGCGGGGGGTGACC
AGGCGCGCGAGTCC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig13313:1..1414-

>mRNA_L-elsbetiae_contig13313.2564.1 ID=mRNA_L-elsbetiae_contig13313.2564.1|Name=mRNA_L-elsbetiae_contig13313.2564.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=816bp|location=Sequence derived from alignment at L-elsbetiae_contig13313:1..1414- (Laminarionema elsbetiae ELsaHSoW15)
GGAAGCACGGACCTGGGCGCGGACGCGGGCCTACTTGCTGGAATGGTTCG
AGCGAGGGAAGCACGGACCTGGGCGCGGACGCGGGCCTACTTGCTGGAAT
GGTTCGAGCGAGGAGCGCCAGGAACCACCTCCGCGAGAGGGGCAAGACGA
AGTCCGGCTCCCAGTCATCGGTGTCCACCGTCGCGTCCACGACCAAGAGC
ACCAAAGCATCCGGCGGGAAGAAAGGAAAATCGGACCGAGGCTCGGGAGC
GCCAGGAACCACCTCCGCGAGAGGGGCAAGACGAAGTCCGGCTCCCAGTC
ATCGGTGTCCACCGTCGCGTCCACGACCAAGAGCACCAAAGCATCCGGCG
GGAAGAAAGGAAAATCGGACCGAGGCTCGGCACGCGACGGTAACCACAAG
CGCGGGACTTCTCCGCGCCCCAGCGCGCCGCGCCAGGCGAGAGCCTCCCA
GCGGCTGTCCAGCGGCACGTCCGCGTCGAACTCGGCAGCGGCGGCGGTGG
CGGCGGCGGTGGCGGCGGCGGCGGGGGCGGCCGGGGGCAGCGGCGGCGGC
GGCGGCGGCGGCGGGGTCGCTGCGGGGGGTGACCAGGCGCGCGAGTCCCA
CGCGACGGTAACCACAAGCGCGGGACTTCTCCGCGCCCCAGCGCGCCGCG
CCAGGCGAGAGCCTCCCAGCGGCTGTCCAGCGGCACGTCCGCGTCGAACT
CGGCAGCGGCGGCGGTGGCGGCGGCGGTGGCGGCGGCGGCGGGGGCGGCC
GGGGGCAGCGGCGGCGGCGGCGGCGGCGGCGGGGTCGCTGCGGGGGGTGA
CCAGGCGCGCGAGTCC
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