mRNA_L-elsbetiae_contig13301.2561.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig13301.2561.1
Unique NamemRNA_L-elsbetiae_contig13301.2561.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig13301.2561.1 vs. uniprot
Match: D7FJR9_ECTSI (Similar to N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase (Glycosylasparaginase) (Aspartylglucosaminidase) (N4-(N-acetyl-beta-glucosaminyl)-L-asparagine amidase) (AGA) isoform 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJR9_ECTSI)

HSP 1 Score: 366 bits (940), Expect = 1.970e-119
Identity = 186/277 (67.15%), Postives = 212/277 (76.53%), Query Frame = 2
Query:  185 LAQHTEHTMLAGEGATKFAKMMGLQEEDLGTDDSHKDYRAWTESSCQPNYYRDFIGAGSSCPPYDTPTSLE---------------QQEKEAFPQ------------VGRSEDPARLLISENNHDTIGIIVVDELGDLACGTTTNGAANKIAGRIGDSPVAGAGCYVDNDVGGAAATGDGDVMMRFLPSFRAVESMRAGATPQDACAEALCSIARFYPTFGGALVCANKTGGHGAARHGLSFAYSYQSAGYYVPQIAQAIEINQEVCADLKKLSLRG 934
            + +HT HTMLAGEGAT FAKM+G++E+DL TDDSHK Y+AW E SCQPNYYR F GAG +CPPYD P++                  Q+  A+              + RS DPARLLISE+NHDTIGII VDE GDLACGTTTNGAANKI GR+GDSP+AGAGCY DNDVG AAATGDGDVMMRFLPSFRAVESMRAG +PQDACA+ALC I RFYPTFGGALVCANK G HGAARHGLSFAYSYQS GY  PQ+AQA++++ EVCA  +K+  +G
Sbjct:  135 VMEHTAHTMLAGEGATLFAKMIGIEEDDLSTDDSHKAYQAWKEKSCQPNYYR-FAGAGDTCPPYDPPSTPSAVGADSSIAALGKHGSQQAAAYADRNTWSRFDDRSWLQRSRDPARLLISEDNHDTIGIIAVDERGDLACGTTTNGAANKIPGRVGDSPIAGAGCYADNDVGSAAATGDGDVMMRFLPSFRAVESMRAGFSPQDACADALCRIVRFYPTFGGALVCANKAGVHGAARHGLSFAYSYQSPGYDSPQVAQAVKVDDEVCARFRKMPSQG 410          
BLAST of mRNA_L-elsbetiae_contig13301.2561.1 vs. uniprot
Match: A0A1W0ABN7_9STRA (N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0ABN7_9STRA)

HSP 1 Score: 223 bits (568), Expect = 1.370e-65
Identity = 115/223 (51.57%), Postives = 153/223 (68.61%), Query Frame = 2
Query:  185 LAQHTEHTMLAGEGATKFAKMMGLQEEDLGTDDSHKDYRAWTESSCQPNYYRDFIGAGSSCPPYDTPTSLEQQEKEAFPQVGRSEDPARLLISENNHDTIGIIVVDELGDLACGTTTNGAANKIAGRIGDSPVAGAGCYVDNDVGGAAATGDGDVMMRFLPSFRAVESMRAGATPQDACAEALCSIARFYPTFGGALVCANKTGGHGAARHGLSFAYSYQSAG 853
            + +H+ H++LAGEGA +FAKMMG Q+E L T  S K Y  W  + CQPNY+R+ +   +SCPPY  P S +QQ  ++  QV      ++L I   NHDTIG++ ++ LG LA GT++NGA +KI GR+GD+P+ GAG YVDN  GGAAATGDGD+MMRFLPS+RAV+ M  G  PQ AC  AL  IA+ YP+F G +VC N  G +G A +G +F+YS  + G
Sbjct:   52 VMEHSSHSILAGEGALEFAKMMGFQQESLSTPYSTKLYHEWQSNHCQPNYFRNVVDQSTSCPPYK-PISRDQQSSDS--QV------SQLWIDHGNHDTIGMVALNSLGQLAGGTSSNGANHKIKGRVGDAPIPGAGAYVDNTKGGAAATGDGDIMMRFLPSYRAVQDMGQGICPQKACENALKEIAKKYPSFKGGMVCLNTKGEYGGAGYGWNFSYSVMTMG 265          
BLAST of mRNA_L-elsbetiae_contig13301.2561.1 vs. uniprot
Match: A0A7S0HY87_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HY87_9CRYP)

HSP 1 Score: 223 bits (569), Expect = 6.970e-65
Identity = 111/233 (47.64%), Postives = 154/233 (66.09%), Query Frame = 2
Query:  185 LAQHTEHTMLAGEGATKFAKMMGLQEEDLGTDDSHKDYRAWTESSCQPNYYRDFIGAGSSCPPYDTPTSLEQQEKEAFPQVGRSEDPARLLISENNHDTIGIIVVDELGDLACGTTTNGAANKIAGRIGDSPVAGAGCYVDNDVGGAAATGDGDVMMRFLPSFRAVESMRAGATPQDACAEALCSIARFYPTFGGALVCANKTGGHGAARHGLSFAYSYQSAGYYVPQIAQAI 883
            + +HT H++L G+ AT FA M G  +E L TD S+  + AW  + CQPN++R F G  S+CPPY   T++ +  ++           A   +S  NHDTIG+I +D  G++A GT+TNGA++KIAGR+GD+ + GAG YVD DVG AAATGDGD+MMRFLP+ RAV +MR G TP +AC EAL +IA+ +P+F GA++C +  G HG A HG  F YS+Q      P+I + +
Sbjct:  124 VMEHTSHSLLVGDKATSFAVMAGFSQEPLETDRSNLLHAAWLANHCQPNFFRGFPGDKSACPPYPPATAMREHARQQ----------ANSHVSRTNHDTIGVIALDADGNMAVGTSTNGASHKIAGRVGDAAIVGAGGYVDKDVGAAAATGDGDLMMRFLPAHRAVSNMRGGMTPGEACEEALEAIAKVHPSFQGAMICVSAQGAHGGAAHGWRFEYSFQEDDMTAPEIVEVV 346          
BLAST of mRNA_L-elsbetiae_contig13301.2561.1 vs. uniprot
Match: A0A8K1CM00_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CM00_PYTOL)

HSP 1 Score: 221 bits (564), Expect = 3.200e-64
Identity = 115/238 (48.32%), Postives = 149/238 (62.61%), Query Frame = 2
Query:  185 LAQHTEHTMLAGEGATKFAKMMGLQEEDLGTDDSHKDYRAWTESSCQPNYYRDFIGAGSSCPPYDTPTSLEQQEKEAFPQVGRSEDPARLLISENNHDTIGIIVVDELGDLACGTTTNGAANKIAGRIGDSPVAGAGCYVDNDVGGAAATGDGDVMMRFLPSFRAVESMRAGATPQDACAEALCSIARFYPTFGGALVCANKTGGHGAARHGLSFAYSYQSAGYYVPQIAQAIEINQE 898
            +  H+ H++LAG+GA  FAKMMG  EE L T  S   Y  W +  CQPNYYR+ +G  +SCPPY            AF Q+      A+ LIS  NHDTIG+IV+D+ G +  GT++NGA +KIAGR+GD+ + GAG YVD+  GGAAATGDGD+MMRFLPSF AV+ M  G  P+ AC  A+  IAR +P F G +VC N+ G +G A HG  F+YS Q++    P +     I  E
Sbjct:  115 VMDHSAHSVLAGDGALAFAKMMGFHEESLETPRSRAMYEQWRDHQCQPNYYRNVVGQNTSCPPYAP----------AFSQLHARSSHAQELISTTNHDTIGMIVLDDSGSMTAGTSSNGANHKIAGRVGDAAIPGAGAYVDSRYGGAAATGDGDIMMRFLPSFHAVQEMARGVHPRVACESAMARIARVFPHFKGGMVCLNRLGEYGGAGHGWKFSYSVQTSDMEDPTVVPVDPIALE 342          
BLAST of mRNA_L-elsbetiae_contig13301.2561.1 vs. uniprot
Match: UPI001455B9E5 (N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase- like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI001455B9E5)

HSP 1 Score: 222 bits (565), Expect = 4.270e-64
Identity = 119/235 (50.64%), Postives = 159/235 (67.66%), Query Frame = 2
Query:  185 LAQHTEHTMLAGEGATKFAKMMGLQEEDLGTDDSHKDYRAWTESSCQPNYYRDFI-GAGSSCPPYDTPTS--LEQQEKEAFPQVGRSEDPARLLISENNHDTIGIIVVDELGDLACGTTTNGAANKIAGRIGDSPVAGAGCYVDNDVGGAAATGDGDVMMRFLPSFRAVESMRAGATPQDACAEALCSIARFYPTFGGALVCANKTGGHGAARHGL-SFAYSYQSAGYYVPQIAQ 877
            +  +T+HT+L GE AT+FAK MG +EE L T+ S +D++ W    CQPN+ ++ +  + SSC PY   T   L+QQ +              + +++ NHDTIG+IV+DE G++A GTTTNGA +K+ GR+GDSP+AG+GCYVDNDVGGAAATGDGDVMMRFLPS RAV++M  G +P  AC +AL  I +FYP F GA+V ANK G +GAA +G  SF YS        P +A+
Sbjct:  134 VMNYTKHTLLVGELATQFAKEMGFKEETLSTNTSIEDWKQWKAKECQPNFRQNVVPDSDSSCGPYVPATGNLLKQQLR------------YNMEVNQGNHDTIGMIVIDEAGNVAGGTTTNGANHKVPGRVGDSPIAGSGCYVDNDVGGAAATGDGDVMMRFLPSLRAVDNMNRGMSPSSACEQALAPIIKFYPDFSGAVVAANKKGVYGAACYGFPSFHYSIYHPALQAPHVAE 356          
BLAST of mRNA_L-elsbetiae_contig13301.2561.1 vs. uniprot
Match: A0A225WGA9_9STRA (N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase n=2 Tax=Phytophthora TaxID=4783 RepID=A0A225WGA9_9STRA)

HSP 1 Score: 219 bits (558), Expect = 6.570e-63
Identity = 114/243 (46.91%), Postives = 156/243 (64.20%), Query Frame = 2
Query:  185 LAQHTEHTMLAGEGATKFAKMMGLQEEDLGTDDSHKDYRAWTESSCQPNYYRDFIGAGSSCPPYDTPTSLEQQEKEAFPQVGRSEDPARL-------LISENNHDTIGIIVVDELGDLACGTTTNGAANKIAGRIGDSPVAGAGCYVDNDVGGAAATGDGDVMMRFLPSFRAVESMRAGATPQDACAEALCSIARFYPTFGGALVCANKTGGHGAARHGLSFAYSYQSAGYYVPQIAQAIEIN 892
            + +H+ H++LAG+GA  FAKMMG +E  L T  S + Y+ W   +CQPNY+R+ +G  SSCPPY    S  +   E   Q      P++        LIS+ NHDTIG++ + E G +A GT++NGA +KIAGR+GD+ + GAG YVD+ +GGAAATGDGDVMMRFLPS+ AV+ M+ GA P+ AC  AL  IA  YP F G +VC NK G +G A +G +FAY+ Q++    PQ+     + 
Sbjct:  132 VMEHSSHSVLAGDGALAFAKMMGFEETPLDTPHSREIYQNWVYHNCQPNYFRNVVGQNSSCPPYQPIPSQREVYTELQGQSLLRSTPSKQNNAEIESLISKENHDTIGMVALAENGHMAAGTSSNGATHKIAGRVGDAAIPGAGAYVDSAIGGAAATGDGDVMMRFLPSYFAVQEMKRGAHPRKACERALHKIAAVYPHFLGGMVCLNKLGEYGGAAYGWNFAYTVQASWMSEPQVVHVTPLR 374          
BLAST of mRNA_L-elsbetiae_contig13301.2561.1 vs. uniprot
Match: M4BZB7_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BZB7_HYAAE)

HSP 1 Score: 219 bits (559), Expect = 1.690e-62
Identity = 112/236 (47.46%), Postives = 157/236 (66.53%), Query Frame = 2
Query:  185 LAQHTEHTMLAGEGATKFAKMMGLQEEDLGTDDSHKDYRAWTESSCQPNYYRDFIGAGSSCPPY-----DTPTSLEQQEKEAFPQVGRSEDPARL--LISENNHDTIGIIVVDELGDLACGTTTNGAANKIAGRIGDSPVAGAGCYVDNDVGGAAATGDGDVMMRFLPSFRAVESMRAGATPQDACAEALCSIARFYPTFGGALVCANKTGGHGAARHGLSFAYSYQSAGYYVPQI 871
            + +H+ H++LAG+GA  FAKMMG +E  L T  + + Y+ W +S CQPNY+R+  G  +SCPPY          +E+ + E+       ++P  +  LIS  NHDTIG++ + + G +  GT++NGA +KIAGR+GD+ V+GAG YVD+ +GGAAATGDGDVMMRFLPSF AV+ M+ G  PQ AC  AL  IA  YP F G +VC N+ G +G A +G +FAYS Q++G   P++
Sbjct:  179 VMEHSSHSILAGDGALAFAKMMGFEETSLSTRHTREVYKRWQDSKCQPNYFRNVHGQNTSCPPYRPFVLSDSVYMEELQGESLLLPTNRQNPVDMEKLISTENHDTIGMVALADSGHMTAGTSSNGATHKIAGRVGDAAVSGAGAYVDSSIGGAAATGDGDVMMRFLPSFVAVQEMKRGVHPQTACEHALRQIAAVYPHFLGGMVCLNRFGEYGGAGYGWNFAYSVQTSGMSEPKV 414          
BLAST of mRNA_L-elsbetiae_contig13301.2561.1 vs. uniprot
Match: A0A484EG55_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EG55_BRELC)

HSP 1 Score: 215 bits (547), Expect = 2.790e-61
Identity = 114/241 (47.30%), Postives = 153/241 (63.49%), Query Frame = 2
Query:  185 LAQHTEHTMLAGEGATKFAKMMGLQEEDLGTDDSHKDYRAWTESSCQPNYYRDFIGAGSSCPPYDTPTS------LEQQEKEAFPQVGRSEDPARLLISENNHDTIGIIVVDELGDLACGTTTNGAANKIAGRIGDSPVAGAGCYVDNDVGGAAATGDGDVMMRFLPSFRAVESMRAGATPQDACAEALCSIARFYPTFGGALVCANKTGGHGAARHGLSFAYSYQSAGYYVPQIAQAIEI 889
            + +H+ H++L G+GA  FAKMMG +E  L T  S + Y+ W  + CQPNYYR+ +G  SSCPPY   TS       + Q++  +    ++   A  LIS+ NHDTIG+IV+ + G +A GT++NGA +KIAGR+GD+ V GAG YVD+ +GGAA TGDGDVMMRFLPS+ AV+ M  G  P+ AC  AL  IA  YP F G +VC N+ G +G A  G  F+YS Q  G   P+I     +
Sbjct:  134 VMEHSAHSILVGDGALNFAKMMGFEETRLDTPHSRELYQKWLRTKCQPNYYRNVLGQNSSCPPYKPLTSKVDVYTTDLQDQTLWSIDQQNSIDAESLISKTNHDTIGMIVLAQDGHMAAGTSSNGAMHKIAGRVGDAAVPGAGAYVDSSIGGAATTGDGDVMMRFLPSYFAVQEMSKGTHPRKACERALNQIAAVYPNFLGGMVCLNRFGEYGGAGIGWDFSYSVQVDGMSEPEIVHVTRL 374          
BLAST of mRNA_L-elsbetiae_contig13301.2561.1 vs. uniprot
Match: W4H637_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H637_9STRA)

HSP 1 Score: 214 bits (544), Expect = 4.430e-61
Identity = 112/222 (50.45%), Postives = 147/222 (66.22%), Query Frame = 2
Query:  185 LAQHTEHTMLAGEGATKFAKMMGLQEEDLGTDDSHKDYRAWTESSCQPNYYRDFIGAGSSCPPYDTPTSLEQQEKEAFPQVGRSEDPARLLISENNHDTIGIIVVDELGDLACGTTTNGAANKIAGRIGDSPVAGAGCYVDNDVGGAAATGDGDVMMRFLPSFRAVESMRAGATPQDACAEALCSIARFYPTFGGALVCANKTGGHGAARHGLSFAYSYQSA 850
            +  H+ H++LAG+GA  FAKMMG  EE L T  S + Y  W E+ CQPNY+++  G  SSCPPYD             P    +    R  I+++NHDTIG+I +D  G +A GT++NGA++KI GR+GD+P+ GAGCYVDND G AAATGDGDVMMRFLPS++AV+ M AG  P+ AC +AL  IA   P+F G +VC N  G +G A HG  F+YS ++A
Sbjct:  130 VMHHSSHSVLAGDGALAFAKMMGFHEESLTTPYSTQLYLQWKENQCQPNYFKNVRGQASSCPPYDP----------LPPHTVTTNMDPRQAINQHNHDTIGMIALDTHGRMAAGTSSNGASHKIMGRVGDAPLPGAGCYVDNDKGAAAATGDGDVMMRFLPSYQAVQDMGAGMHPKAACEKALRRIADKVPSFKGGMVCLNAQGVYGGAGHGWGFSYSVRTA 341          
BLAST of mRNA_L-elsbetiae_contig13301.2561.1 vs. uniprot
Match: G4YZK8_PHYSP (Uncharacterized protein n=14 Tax=Phytophthora TaxID=4783 RepID=G4YZK8_PHYSP)

HSP 1 Score: 214 bits (545), Expect = 6.100e-61
Identity = 113/247 (45.75%), Postives = 159/247 (64.37%), Query Frame = 2
Query:  185 LAQHTEHTMLAGEGATKFAKMMGLQEEDLGTDDSHKDYRAWTESSCQPNYYRDFIGAGSSCPPYDTPTSLEQQ-----EKEAFPQVGRSED------PARLLISENNHDTIGIIVVDELGDLACGTTTNGAANKIAGRIGDSPVAGAGCYVDNDVGGAAATGDGDVMMRFLPSFRAVESMRAGATPQDACAEALCSIARFYPTFGGALVCANKTGGHGAARHGLSFAYSYQSAGYYVPQIAQAIEIN 892
            + +H+ H++LAG+GA  FAKMMG +E  L T  S + Y+ W +  CQPNY+R+ +G  +SCPPY  P   E +     E ++  +   + D        + LIS+ NHDTIG++V+ E G +A GT++NGA +KIAGR+GD+ V GAG YVD+ +GGAAATGDGDVMMRFLPSF AV+ M+ GA P+ AC  AL  IA  YP F G +VC N+ G  G A +G  FA++ Q++    P++     ++
Sbjct:  131 VMEHSSHSILAGDGALAFAKMMGFEETPLDTPRSREIYQKWLDGKCQPNYFRNVVGQNASCPPYK-PLPSEHEVYAGIEGQSLLRATSTSDRRQNNVDVQSLISKQNHDTIGMVVLAENGHMAAGTSSNGATHKIAGRVGDAAVPGAGAYVDSSIGGAAATGDGDVMMRFLPSFFAVQEMKRGAHPRKACERALHRIAAVYPHFLGGMVCLNRLGEFGGAGYGWDFAFTVQASWMSEPEVVHVTPLS 376          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13301.2561.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJR9_ECTSI1.970e-11967.15Similar to N(4)-(Beta-N-acetylglucosaminyl)-L-aspa... [more]
A0A1W0ABN7_9STRA1.370e-6551.57N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase n=... [more]
A0A7S0HY87_9CRYP6.970e-6547.64Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A8K1CM00_PYTOL3.200e-6448.32Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
UPI001455B9E54.270e-6450.64N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase- l... [more]
A0A225WGA9_9STRA6.570e-6346.91N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase n=... [more]
M4BZB7_HYAAE1.690e-6247.46Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A484EG55_BRELC2.790e-6147.30Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
W4H637_9STRA4.430e-6150.45Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]
G4YZK8_PHYSP6.100e-6145.75Uncharacterized protein n=14 Tax=Phytophthora TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13301contigL-elsbetiae_contig13301:708..3567 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score358.2
Seed ortholog evalue3e-96
Seed eggNOG ortholog2880.D7FJR9
KEGG koko:K01444
KEGG Pathwayko00511,ko04142,map00511,map04142
Hectar predicted targeting categoryother localisation
EggNOG free text desc.N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity
EggNOG OGsCOG1446@1,KOG1593@2759
EC3.5.1.26
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Ec32 ortholog descriptionPeptidase T2, asparaginase 2
Ec32 orthologEc-06_010440.1
Exons3
Model size1563
Cds size732
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13301.2561.1prot_L-elsbetiae_contig13301.2561.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig13301 916..2944 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815506.2635715-UTR-L-elsbetiae_contig13301:707..9151622815506.2635715-UTR-L-elsbetiae_contig13301:707..915Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig13301 708..915 +
1691682931.5755985-UTR-L-elsbetiae_contig13301:707..9151691682931.5755985-UTR-L-elsbetiae_contig13301:707..915Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig13301 708..915 +
1622815506.3136785-UTR-L-elsbetiae_contig13301:2944..35671622815506.3136785-UTR-L-elsbetiae_contig13301:2944..3567Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig13301 2945..3567 +
1691682931.6190934-UTR-L-elsbetiae_contig13301:2944..35671691682931.6190934-UTR-L-elsbetiae_contig13301:2944..3567Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig13301 2945..3567 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815506.2780497-CDS-L-elsbetiae_contig13301:915..13641622815506.2780497-CDS-L-elsbetiae_contig13301:915..1364Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13301 916..1364 +
1691682931.5881376-CDS-L-elsbetiae_contig13301:915..13641691682931.5881376-CDS-L-elsbetiae_contig13301:915..1364Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13301 916..1364 +
1622815506.2895777-CDS-L-elsbetiae_contig13301:2077..21671622815506.2895777-CDS-L-elsbetiae_contig13301:2077..2167Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13301 2078..2167 +
1691682931.6011608-CDS-L-elsbetiae_contig13301:2077..21671691682931.6011608-CDS-L-elsbetiae_contig13301:2077..2167Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13301 2078..2167 +
1622815506.3019714-CDS-L-elsbetiae_contig13301:2751..29441622815506.3019714-CDS-L-elsbetiae_contig13301:2751..2944Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13301 2752..2944 +
1691682931.6104345-CDS-L-elsbetiae_contig13301:2751..29441691682931.6104345-CDS-L-elsbetiae_contig13301:2751..2944Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13301 2752..2944 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig13301.2561.1

>prot_L-elsbetiae_contig13301.2561.1 ID=prot_L-elsbetiae_contig13301.2561.1|Name=mRNA_L-elsbetiae_contig13301.2561.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=244bp
MLAGEGATKFAKMMGLQEEDLGTDDSHKDYRAWTESSCQPNYYRDFIGAG
SSCPPYDTPTSLEQQEKEAFPQVGRSEDPARLLISENNHDTIGIIVVDEL
GDLACGTTTNGAANKIAGRIGDSPVAGAGCYVDNDVGGAAATGDGDVMMR
FLPSFRAVESMRAGATPQDACAEALCSIARFYPTFGGALVCANKTGGHGA
ARHGLSFAYSYQSAGYYVPQIAQAIEINQEVCADLKKLSLRGY*
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mRNA from alignment at L-elsbetiae_contig13301:708..3567+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig13301.2561.1 ID=mRNA_L-elsbetiae_contig13301.2561.1|Name=mRNA_L-elsbetiae_contig13301.2561.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2860bp|location=Sequence derived from alignment at L-elsbetiae_contig13301:708..3567+ (Laminarionema elsbetiae ELsaHSoW15)
GTTTCCTGCTGGCAAGGAAGTCTGTGGTGTCCAGGCTGGGTCTCAGCGTA TAGCGATAGCGTATCTTCCGCAGTTTCGCATTGCGGCTGGCTTCTTTGTG ATACGAATCGGTGCCCGGCGTGAGTGGCGGCCGTCCTTACCGCCCAACCC TCTTTGGACCCAATCCGGCATCCCCCACCCTCCGCTGGCGCAGCATACAG AGCACACGATGTTAGCCGGTGAAGGAGCTACCAAGTTTGCTAAGATGATG GGGTTGCAAGAAGAAGACCTCGGGACAGACGATTCTCACAAGGATTACCG GGCCTGGACGGAGAGTTCTTGCCAGCCTAACTACTACAGAGACTTCATTG GAGCCGGGAGCAGTTGCCCGCCGTATGACACTCCGACATCGTTAGAGCAG CAGGAAAAAGAAGCATTTCCTCAGGTGGGCCGGTCTGAGGACCCTGCGCG ATTGCTGATATCTGAAAACAACCACGACACTATCGGAATCATCGTGGTCG ACGAGCTGGGCGATCTCGCTTGCGGTACGACTACCAACGGAGCGGCAAAC AAGATCGCCGGTCGTATCGGAGACAGTCCCGTGGCCGGTGCCGGTTGCTA TGTCGACAATGACGTCGGTGGCGCTGCCGCTACCGGCGATGGTGACGTCA TGATGAGGTAGGAATCGATCATTGCAGTAGCTGATAATGTGCTGGTACGT AGAACTAGCTCACTCGGGTGCTGCTGAAACGTTTGAGAACATTTTGTCGC TGGTCGCTGCATCCGGTCGTTCTTCAGTAGTTTTGGTGTTGTCATATTAT TTAGGTACATAACCAAGTCTCCCCGGTGGTCTAGGTGGTTTATCTTCGAA CCCACTAGCAGCAAAGTCTGGAGTTCAATCCCACGCAGAAGTGTTTATTT TGCGACTTTGCAGGTGAAAGCGATAAAAGCTGAAAAGCTCGTGAGTACCA AACTTTGACGTAATCACGTTGACGAGGGAAAGGGACAGCTGAACCCTTCT CGCGATAAAACCCAAGGCAAGAACCGCAGGAGGAAGGTGGGGCAAAAAAA ATAAAATAAAAAAGAAGATAAAGCCTGAGTGTTCATCTCCTCCTGTGTGA CCCCGGTTGGTTCTAGTTGTACATACAAATGCACTGCAAAGTGCAGTACC TCTATCTAAGTACACCGCAAGGTGTAGTACATGTCTCCACTTGGGGGGAC TGTCGCCAAAAAATGGGAAGGACACACACACACACACACACACACACACA CACACACACAATCAAGTGGTGCAAACAAGGATCATACCAGGCGATGCGAT TACGTGGCAGCCCGCGCTTTCTCTTTGTCGTCGATTTCTGAACTCGATAA AATTGTTACCTGGTGGACAGGTTTTTACCCTCATTTCGAGCTGTGGAAAG TATGCGGGCGGGCGCTACCCCACAAGATGCTTGCGCCGAGGCTCTGTGCA GTATCGCGAGGTGAGTCGTCGAAGTCTGGTGTTGGTTAAGTGGGCTAACC CATTAGACCACTCAGTCAGTTTCCCCGGAGATCAATGCTTGACAGGATTG GGTGCTTCGGCTCCCAAAGTACATCTTTTGTTGGTTATATGGGCTAACTT AGACCACTCAGTCAGCGTTAACCAACATCTGGAGCCGATTTATCCCAGCA CCGAGAGGATCGTAGCGCTTGTTGTCAGACGGATAAATTTGAGCAAATAA TACGAGCAAACGCTTGTTTTTCATCCTTATGCCCGGGTTTGCCGGTGGAT GAGTTTGGTGGATGACAACTCTCCACAACCCTTCCGTGATATTTTTAAGA ATGCAAAGCAGCAACGGGCGCGTTACATTCTGCAGCTGTTCGAGTGGTGC TTGGGCTCTTGCTCTTGGTAGAAAAAACGAGACGGCTTACCACACCTCAA TTACTTTCCCTTCTTCTTTCTGAAGCTTTCGTTCAAAGCCTTCCGTGCCG ACTTCCAATTTGTGGGTGGTGCAATACTATCTTAGGAAACAAGCGAAGCC GTGTTGTTGTATGTAAGGGTCTGCCCTCCCGCGATTCGTGTCAGGTTCTA TCCCACATTCGGCGGGGCGCTGGTGTGTGCCAACAAGACAGGGGGGCACG GAGCAGCTCGCCACGGGCTGTCGTTTGCGTATTCGTACCAGTCTGCCGGG TATTATGTTCCGCAGATCGCCCAGGCGATTGAGATCAACCAAGAAGTTTG CGCCGACCTGAAGAAGTTATCCTTGCGGGGTTACTGAATCATGCTATGTA GAGATTACTGCCGTATCCAAAGCCTGTGTAAAATTCATGTAGATTCAAGA AATGGTGAAAGGGTGTGTGCTTAATACAAGTGTTCAAGGAGAGGGATGGG TTTGAAGAAAAGCAGGGTGGGAGATCGACGCGCGTGACAGGGTGAGCTTT AGAACACTCGTTGAGAAAAACGAGATGTCCAAAGTGATGGCTTCCTCGTA GACAATCGCGGCTCCAACAGACGTGGTAGTGAAGCAGGTTTATATGTACG ACCGTTGAGGCAACACAATACTGCTGTGCAATCGAAATCAAATTGGCAAT CGTGTTTTGTCTAATGTAGCACTAAGAAACGTGAGAAATAAGAGCGCTAC GTTTCCAGTGATTGCGTGGTATTTATGAATGTGATCGTGCAAATACTCTA GGCAAGCACAGACAAAAAGCACGCCTCCTATTGTAGAAATATATCCTTGA GAGTGCACACCGCCGAGGATGTTGCAACCACATTGGAGCTGGCCCTATCA GGAAGAAGATTCGTGATTGATGGTGCAAAGATAGGGGCCAGCGACTGCAG TAGTAGCGCGCAAGCCCCTTACTGCCGGCCTCAGGAGTGCGCACATCACC ATGAGCCGAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig13301:708..3567+

>mRNA_L-elsbetiae_contig13301.2561.1 ID=mRNA_L-elsbetiae_contig13301.2561.1|Name=mRNA_L-elsbetiae_contig13301.2561.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1464bp|location=Sequence derived from alignment at L-elsbetiae_contig13301:708..3567+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTTAGCCGGTGAAGGAGCTACCAAGTTTGCTAAGATGATGGGGTTGCA
AGAAGAAGACCTCGGGACAGACGATTCTCACAAGGATTACCGGGCCTGGA
CGGAGAGTTCTTGCCAGCCTAACTACTACAGAGACTTCATTGGAGCCGGG
AGCAGTTGCCCGCCGTATGACACTCCGACATCGTTAGAGCAGCAGGAAAA
AGAAGCATTTCCTCAGGTGGGCCGGTCTGAGGACCCTGCGCGATTGCTGA
TATCTGAAAACAACCACGACACTATCGGAATCATCGTGGTCGACGAGCTG
GGCGATCTCGCTTGCGGTACGACTACCAACGGAGCGGCAAACAAGATCGC
CGGTCGTATCGGAGACAGTCCCGTGGCCGGTGCCGGTTGCTATGTCGACA
ATGACGTCGGTGGCGCTGCCGCTACCGGCGATGGTGACGTCATGATGAGA
TGTTAGCCGGTGAAGGAGCTACCAAGTTTGCTAAGATGATGGGGTTGCAA
GAAGAAGACCTCGGGACAGACGATTCTCACAAGGATTACCGGGCCTGGAC
GGAGAGTTCTTGCCAGCCTAACTACTACAGAGACTTCATTGGAGCCGGGA
GCAGTTGCCCGCCGTATGACACTCCGACATCGTTAGAGCAGCAGGAAAAA
GAAGCATTTCCTCAGGTGGGCCGGTCTGAGGACCCTGCGCGATTGCTGAT
ATCTGAAAACAACCACGACACTATCGGAATCATCGTGGTCGACGAGCTGG
GCGATCTCGCTTGCGGTACGACTACCAACGGAGCGGCAAACAAGATCGCC
GGTCGTATCGGAGACAGTCCCGTGGCCGGTGCCGGTTGCTATGTCGACAA
TGACGTCGGTGGCGCTGCCGCTACCGGCGATGGTGACGTCATGATGAGGT
TTTTACCCTCATTTCGAGCTGTGGAAAGTATGCGGGCGGGCGCTACCCCA
CAAGATGCTTGCGCCGAGGCTCTGTGCAGTATCGCGAGGTTTTTACCCTC
ATTTCGAGCTGTGGAAAGTATGCGGGCGGGCGCTACCCCACAAGATGCTT
GCGCCGAGGCTCTGTGCAGTATCGCGAGGTTCTATCCCACATTCGGCGGG
GCGCTGGTGTGTGCCAACAAGACAGGGGGGCACGGAGCAGCTCGCCACGG
GCTGTCGTTTGCGTATTCGTACCAGTCTGCCGGGTATTATGTTCCGCAGA
TCGCCCAGGCGATTGAGATCAACCAAGAAGTTTGCGCCGACCTGAAGAAG
TTATCCTTGCGGGGTTACTGAGTTCTATCCCACATTCGGCGGGGCGCTGG
TGTGTGCCAACAAGACAGGGGGGCACGGAGCAGCTCGCCACGGGCTGTCG
TTTGCGTATTCGTACCAGTCTGCCGGGTATTATGTTCCGCAGATCGCCCA
GGCGATTGAGATCAACCAAGAAGTTTGCGCCGACCTGAAGAAGTTATCCT
TGCGGGGTTACTGA
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