mRNA_L-elsbetiae_contig1021.255.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1021.255.1 vs. uniprot
Match: A0A6H5KV61_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV61_9PHAE) HSP 1 Score: 343 bits (881), Expect = 1.490e-105 Identity = 221/327 (67.58%), Postives = 239/327 (73.09%), Query Frame = 1 Query: 61 VGKPLDG-----DXXXXXXXXXPRDEVDILAAATARLHLESGVHDGEGGGDVDGEHSREGH-HASPVGDDEQXXXXXXXXXXXXXXXXXXXXXXKFGLKVLVPGITAGCLIGKGGKIINQLQTATGTRVKLSQKNEFFPGTHDRVALVQGEDPNMVAEAVAEMLRRLREAARPNP--------------HDGFGGLGGGGLDGPHGRNAQVTIRLLVPLAAGGLIIGRGGETIKAIGARTGARVILAGKDADVAGVPSERLCSIQADLESAIKVMFLIVGKMAEDRGLSKYQSNQTCYQTGLSAGSPGMGGDGSTDGSQHQ--HPQL 975 VG P+DG + D LA ATAR+HL + H+ G +EGH H GD E+ XXXXXXXXXXXXXKF LKVLVPGITAGCLIGKGGKIINQ+QT T TRVKLSQKNEFFPGTHDRVALVQGE P +VAEAVAEMLRRLREAARP P HDG+G GGLD P+GR+AQV IRLLVPLAAGGLIIGRGGETIKAIGARTGARVILAGKDADVAGVPSERLCSIQADLE AIKV+FLIVGKMAEDRGLS +NQTCYQTGLS G+P +GGDGS DG Q+Q HP + Sbjct: 105 VGSPVDGALTTVEGTQQGGGSARGDVCSSLAEATARMHL-ADPHE-------KGSDEKEGHEHLLSGGDGEEKQDWSQGDEXXXXXXXXXXXXXKFALKVLVPGITAGCLIGKGGKIINQIQTNTNTRVKLSQKNEFFPGTHDRVALVQGEQPTLVAEAVAEMLRRLREAARPTPQAPFMGGGVPYSTVHDGYGS---GGLDEPYGRDAQVMIRLLVPLAAGGLIIGRGGETIKAIGARTGARVILAGKDADVAGVPSERLCSIQADLEGAIKVVFLIVGKMAEDRGLS---NNQTCYQTGLSLGAPVVGGDGSIDGGQYQFQHPTM 417
BLAST of mRNA_L-elsbetiae_contig1021.255.1 vs. uniprot
Match: D7FM83_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM83_ECTSI) HSP 1 Score: 269 bits (687), Expect = 6.460e-85 Identity = 162/241 (67.22%), Postives = 169/241 (70.12%), Query Frame = 1 Query: 118 DEVDILAAATARLHLESGVHDGEGGGDVDGEHSREGH-HASPVGDDEQXXXXXXXXXXXXXXXXXXXXXXKFGLKVLVPGITAGCLIGKGGKIINQLQTATGTRVKLSQKNEFFPGTHDRVALVQGEDPNMVAEAVAEMLRRLREAARPNPHDGF-----------GGLGGGGLDGPHGRNAQVTIRLLVPLAAGGLIIGRGGETIKAIGARTGARVILAGKDADVAGVPSERLCSIQADL 804 D LA ATAR+HL D GGD + EGH H GD E+ KF LKVLVPGITAGCLIGKGGKIINQ+QT T TRVKLSQKNEFFPGTHDRVALVQGE P +VAEAVAEMLRRLREAARP P F G G GGLDGPHGR+AQVTIRLLVPLAAGGLIIGRGGETIKAIGARTGARVILAGKDADVAGVPSERLCSIQ + Sbjct: 62 DVCGSLAEATARMHLA----DPHEGGDEE-----EGHDHLLSGGDGEEKQDWSQGDEDREEREREPQP--KFALKVLVPGITAGCLIGKGGKIINQIQTNTNTRVKLSQKNEFFPGTHDRVALVQGEQPTLVAEAVAEMLRRLREAARPTPQAPFMGGGVPYSTVHEGYGSGGLDGPHGRDAQVTIRLLVPLAAGGLIIGRGGETIKAIGARTGARVILAGKDADVAGVPSERLCSIQPSM 291
BLAST of mRNA_L-elsbetiae_contig1021.255.1 vs. uniprot
Match: A0A7S2UYD0_9STRA (Hypothetical protein (Fragment) n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYD0_9STRA) HSP 1 Score: 135 bits (340), Expect = 3.060e-34 Identity = 81/201 (40.30%), Postives = 112/201 (55.72%), Query Frame = 1 Query: 328 FGLKVLVPGITAGCLIGKGGKIINQLQTATGTRVKLSQKNEFFPGTHDRVALVQGEDPNMVAEAVAEMLRRLREAARPNPHDGFGGLGGGGLDGPHGRNAQVTIRLLVPLAAGGLIIGRGGETIKAIGARTGARVILAGKDADVAGVPSERLCSIQADLESAIKVMFLIVGKMAEDRGLSKYQSNQTCYQTGLSAGSPGMG 930 F +K+ +PG AGC+IGKGG +I LQ T TR+KLS FFPG+ +RV L G+ P+ V A+ E++ R+ E + D G H N ++ + +LVP AA G +IG+GGE +KAI A +G +V +A KD PSER C I + VM V ++ EDR LSKYQ+ T Y + G+ G G Sbjct: 27 FTIKITIPGYLAGCIIGKGGSVITDLQARTSTRIKLSAARAFFPGSSNRVLLCTGK-PDAVKTALTEIVSRVEENFKTKNADSS-------ASGEHPVNKELQMGVLVPQAASGCVIGKGGEVMKAIQASSGCKVQMAQKDQ--MSYPSERPCDITGEAAGIAGVMCTFVDRLLEDRDLSKYQNPSTNYTPRTAGGAAGGG 217
BLAST of mRNA_L-elsbetiae_contig1021.255.1 vs. uniprot
Match: A0A835YS36_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS36_9STRA) HSP 1 Score: 135 bits (339), Expect = 4.290e-33 Identity = 78/186 (41.94%), Postives = 111/186 (59.68%), Query Frame = 1 Query: 337 KVLVPGITAGCLIGKGGKIINQLQTATGTRVKLSQKNEFFPGTHDRVALVQGEDPNMVAEAVAEMLRRLREAARPNPHDGFGGLGGGGLDGPHGRNAQVTIRLLVPLAAGGLIIGRGGETIKAIGARTGARVILAGKDADVAGVPSERLCSIQADLESAIKVMFLIVGKMAEDRGLSKYQSNQTCY 894 K+L+P +GC+IGK TGT++KLSQ +EFFPGT++RV LV GE P+ V +AVAE+LRR E R H P + R ++P+AA GLIIGRGGET+KA+G +TGARV LA K + +ER+C++ ++ ++V ++ KMA++ LSKY + T Y Sbjct: 52 KMLIPSHVSGCIIGKA---------LTGTKIKLSQNSEFFPGTNERVVLVMGE-PDAVRKAVAEVLRRTSEGLRAIKHQSSSS--------PTAKKPGALFRAVLPMAAAGLIIGRGGETVKALGQQTGARVQLANKAQ--CPIATERICTVTGSMQGVLEVASFMIEKMAQEPVLSKYANPSTSY 217
BLAST of mRNA_L-elsbetiae_contig1021.255.1 vs. uniprot
Match: A0A7S2XVB9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVB9_9STRA) HSP 1 Score: 118 bits (295), Expect = 7.040e-28 Identity = 73/189 (38.62%), Postives = 104/189 (55.03%), Query Frame = 1 Query: 328 FGLKVLVPGITAGCLIGKGGKIINQLQTATGTRVKLSQKNEFFPGTHDRVALVQGEDPNMVAEAVAEMLRRLREAARPNPHDGFGGLGGGGLDGPHGRNAQVTIRLLVPLAAGGLIIGRGGETIKAIGARTGARVILAGKDADVAGVPSERLCSIQADLESAIKVMFLIVGKMAEDRGLSKYQSNQTCY 894 F +K+L+PG AGC+IGKGG +I LQ T T +++S ++FPGT+DRV + G N V A+ E++ R+ E + G DG + + I + +P AA G IIGRGGE +KAI A +G +V LA KD PSER +I D V+ + ++ DRGL +YQ+ T Y Sbjct: 22 FSIKLLIPGFLAGCVIGKGGSVITDLQARTSTTIRMSSNRDYFPGTNDRVLMCTGVTDN-VKTAITEIISRVEENFKSK----------GTKDGEPSSD-EFNIGVSLPSAAAGCIIGRGGEVMKAIQASSGCKVRLASKDELT--YPSERPATITGDAVGIAGVVCAFMDRLLSDRGLCEYQNPGTNY 196
BLAST of mRNA_L-elsbetiae_contig1021.255.1 vs. uniprot
Match: A0A7S1BNP4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BNP4_9STRA) HSP 1 Score: 122 bits (306), Expect = 1.360e-27 Identity = 79/207 (38.16%), Postives = 116/207 (56.04%), Query Frame = 1 Query: 334 LKVLVPGITAGCLIGKGGKIINQLQTATGTRVKLSQKNEFFPGTHDRVALVQGEDPNMVAEAVAEMLRRLREAARPNPHDGFGGLGGGGLDGP-------HGRNAQVTIRLLVPLAAGGLIIGRGGETIKAIGARTGARVILAGKDADVAGVPSERLCSIQADLESAIKVMFLIVGKMAEDRGLSKYQSNQTCYQTGLSAGSPGMGG 933 LKVL+ AG +IG+ G+ I+ LQ +G R+KLSQ + FPGT +RV L+QGE N V EAVA +L ++R+A +G G G D R++ I++LVP A G++IGRGG IK+I +GAR+ LA KD + SER+ +I DL + L++ + E+ L++Y + T Y ++ S MGG Sbjct: 155 LKVLLSNNLAGSIIGRNGQSISDLQARSGCRIKLSQSGDTFPGTGERVCLIQGEGVNAVREAVALVLAKVRDAK-----EGQGEFAEDGTDSADVSSRQQRTRSSTYVIKVLVPSPACGMLIGRGGSNIKSISESSGARIQLASKDEAASVATSERVVTITGDLGCCTSCIGLVLDSLHENPELARYANMTTSYSRAMA--SSAMGG 354
BLAST of mRNA_L-elsbetiae_contig1021.255.1 vs. uniprot
Match: A0A7S1HMQ6_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HMQ6_HEMAN) HSP 1 Score: 109 bits (272), Expect = 4.710e-24 Identity = 66/190 (34.74%), Postives = 107/190 (56.32%), Query Frame = 1 Query: 328 FGLKVLVPGITAGCLIGKGGKIINQLQTATGTRVKLSQKNEFFPGTHDRVALVQGEDPNMVAEAVAEMLRRLREAARPNPHDGFGGLGGGGLDGPHGRNAQVTIRLLVPLAAGGLIIGRGGETIKAIGARTGARVILAGKDADVAGVPSERLCSIQADLESAIKVMFLIVGKMAEDRGLSKYQSNQTCYQ 897 F +K+LV AG +IG+GG+ I+ +Q+ TG+R+++S NE+FP T DRV L+ GE PN V E V +L + A +D G Q+ ++LL+P + G +IG+GGE IK + +GA++ L K+ V GV ER+ ++Q + +K +V K+AED + + ++ T Y+ Sbjct: 72 FAMKLLVNNKDAGTVIGRGGQTISSMQSKTGSRIRVSNANEYFPNTQDRVVLITGE-PNSVTEGVKSVLEEVFCNAESLQNDA-----------QSGEERQILLKLLIPNNSAGSVIGKGGECIKKMQEESGAKIQLTTKEQQVPGV-DERILTVQGSVSCIVKGAEQVVRKIAEDPSVG-FTNHTTNYR 247
BLAST of mRNA_L-elsbetiae_contig1021.255.1 vs. uniprot
Match: D7FM84_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM84_ECTSI) HSP 1 Score: 105 bits (263), Expect = 1.270e-23 Identity = 74/121 (61.16%), Postives = 82/121 (67.77%), Query Frame = 1 Query: 772 SERLCSIQADLESAIKVMFLIVGKMAEDRGLSKYQSNQTCYQTGLSAGSPGMGGDGSTDGSQH--QHPQLHPMHAGHSASTAFMQQQPQASWSAAG-RAGANN-------PNAGFGGGGPL 1104 SE L S ADLE AIKV+FLIVGKMAEDRGLSKYQSNQTCYQTGLS+G+P MGGDGS DG Q+ QHP + AG++ QQQPQ W +G R G N GFGGGGPL Sbjct: 9 SEPLAS--ADLEGAIKVVFLIVGKMAEDRGLSKYQSNQTCYQTGLSSGAPVMGGDGSIDGGQYHFQHPAM--AAAGNNPFAHQHQQQPQ--WGGSGGRQGLNRGVGDVGGAAPGFGGGGPL 123
BLAST of mRNA_L-elsbetiae_contig1021.255.1 vs. uniprot
Match: A0A7S2UYP3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYP3_9STRA) HSP 1 Score: 105 bits (262), Expect = 9.940e-23 Identity = 90/241 (37.34%), Postives = 120/241 (49.79%), Query Frame = 1 Query: 334 LKVLVPGITAGCLIGKGGKIINQLQTATGTRVKLSQKNEFFP-----------GTHDRVALVQGEDPNMVAEAVAEMLRRLREAARPNPHDGFGGLGG---GG---------------LDGPHGRN-----AQVTIRLLVPLAAGGLIIGRGGETIKAIGARTGARVILAGKDADVAGVPSERLCSIQADLESAIKVMFLIVGKMAEDRGLSKYQSNQTCYQTGLSAGSP-GMGGDGSTDG 951 LK L+P AG LIG+GG I LQ A+G RV+LS +N FP G DRVAL+ GE + V A ++ RL A GG GG GG GP + A +T+RL+VP +AGGL+IGR G TIK + R+ L G++ ++ VPSER+ ++Q + + + LI+ KMAED SKYQ Y+ G G+ G GG G DG Sbjct: 11 LKFLIPTRLAGGLIGQGGVHIAGLQEASGCRVRLSSQNAHFPVAPGAQGQAGSGGGDRVALLTGE-LDQVQRAQDMIVHRLHIAMGEREDRRSGGAGGIKSGGQGEDEDADVPXXXXXXGGPSSSSPLPPDAPMTVRLVVPASAGGLLIGRQGATIKQMSEAAQCRLQLQGRE--LSAVPSERIVTLQGPPANIVAGIDLILNKMAEDPAASKYQILSVTYRRGHVRGATYGGGGGGMIDG 248
BLAST of mRNA_L-elsbetiae_contig1021.255.1 vs. uniprot
Match: A0A7S0W657_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0W657_9CRYP) HSP 1 Score: 105 bits (261), Expect = 1.290e-22 Identity = 63/190 (33.16%), Postives = 108/190 (56.84%), Query Frame = 1 Query: 328 FGLKVLVPGITAGCLIGKGGKIINQLQTATGTRVKLSQKNEFFPGTHDRVALVQGEDPNMVAEAVAEMLRRLREAARPNPHDGFGGLGGGGLDGPHGRNAQVTIRLLVPLAAGGLIIGRGGETIKAIGARTGARVILAGKDADVAGVPSERLCSIQADLESAIKVMFLIVGKMAEDRGLSKYQSNQTCYQ 897 F +K+LV AG +IG+GG+ I+ +Q TG+R+++S NE+FP T DRV L+ GE N VA+ V +L + A ++ G Q+T+++L+P A G +IG+GGE IK + +GA++ L K+ V GV ER+ ++Q + + +K +V +++ED + + ++ T Y+ Sbjct: 68 FAMKLLVGNKDAGTVIGRGGQTISSMQAKTGSRIRVSNANEYFPNTQDRVVLITGEVRN-VADGVKNVLEEVFCNAESLQNEAASG-----------EERQITLKMLIPNGAAGSVIGKGGECIKRMQEESGAKIQLTTKEQQVPGV-DERILTVQGPVSAIVKGAEQVVHRISEDPTVG-FTNHTTSYR 243 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1021.255.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1021.255.1 >prot_L-elsbetiae_contig1021.255.1 ID=prot_L-elsbetiae_contig1021.255.1|Name=mRNA_L-elsbetiae_contig1021.255.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=371bp SGDGSASPPASGVISGVDVVVGKPLDGDGGGGGGGGGPRDEVDILAAATAback to top mRNA from alignment at L-elsbetiae_contig1021:4598..12486+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1021.255.1 ID=mRNA_L-elsbetiae_contig1021.255.1|Name=mRNA_L-elsbetiae_contig1021.255.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7889bp|location=Sequence derived from alignment at L-elsbetiae_contig1021:4598..12486+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1021:4598..12486+ >mRNA_L-elsbetiae_contig1021.255.1 ID=mRNA_L-elsbetiae_contig1021.255.1|Name=mRNA_L-elsbetiae_contig1021.255.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2226bp|location=Sequence derived from alignment at L-elsbetiae_contig1021:4598..12486+ (Laminarionema elsbetiae ELsaHSoW15)back to top |