prot_L-elsbetiae_contig13265.2536.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig13265.2536.1
Unique Nameprot_L-elsbetiae_contig13265.2536.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length202
Homology
BLAST of mRNA_L-elsbetiae_contig13265.2536.1 vs. uniprot
Match: D7FNH1_ECTSI (U3 small nucleolar RNA-associated protein 11 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNH1_ECTSI)

HSP 1 Score: 366 bits (939), Expect = 9.390e-127
Identity = 189/202 (93.56%), Postives = 197/202 (97.52%), Query Frame = 0
Query:    1 MSSLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKTEGGVHVLDGAESLPHDVVQMLKTQDLGYVSTHRSADERKAARLRESLHMLDAGPRNKHTIFFDSEKEAKKFDAAKHFDTVPELAGRAFNRPRKKTLETAQVAGATNRRELKRVLKKRDASYSELVQRLER 202
            MSSLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKTEGGVHVLDGAE+LPHDVVQ+LKTQDLGYVSTHRSADERKAA+LRESLHML+AGPRNKHTIFFDSEKEAK+FD AKHFDTVPELA RAFNRPRK TLE AQV GATNRR+LK+VLKKRDASYSEL+QRLER
Sbjct:    1 MSSLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKTEGGVHVLDGAETLPHDVVQLLKTQDLGYVSTHRSADERKAAKLRESLHMLEAGPRNKHTIFFDSEKEAKEFDVAKHFDTVPELADRAFNRPRKDTLEKAQVTGATNRRQLKKVLKKRDASYSELMQRLER 202          
BLAST of mRNA_L-elsbetiae_contig13265.2536.1 vs. uniprot
Match: A0A836CK24_9STRA (U3 small nucleolar RNA-associated protein 11 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK24_9STRA)

HSP 1 Score: 246 bits (628), Expect = 1.910e-79
Identity = 124/202 (61.39%), Postives = 157/202 (77.72%), Query Frame = 0
Query:    1 MSSLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKTEGGVHVLDGAESLPHDVVQMLKTQDLGYVSTHRSADERKAARLRESLHMLDAGPRNKHTIFFDSEKEAKKFDAAKHFDTVPELAGRAFNRPRKKTLETAQVAGATNRRELKRVLKKRDASYSELVQRLER 202
            MSSLRNAVKR  HKERAQPASR K GLLEKH DYVLRAR+Y  KRDR+ AL+LKA+++NPDEFYF MH+ KT+ GVH ++G+ SL H+   MLKTQD+ Y+   R+ D +KA RL+  LHMLDA P+N HT+F  ++++ + FDAA++FDT PELAGR FNRPR  TLE+ QV GA +R +LK+ LK+RDA+Y E+  R ER
Sbjct:    1 MSSLRNAVKRKTHKERAQPASRSKFGLLEKHSDYVLRARDYNAKRDRLNALRLKASLRNPDEFYFGMHKAKTKEGVHQVEGSSSLDHETAHMLKTQDMAYIHMKRAVDIKKAERLKAGLHMLDAPPQNTHTVFVKNKRQRRAFDAAEYFDTAPELAGRTFNRPRMATLESKQVLGAESRADLKKALKQRDAAYQEVEAREER 202          
BLAST of mRNA_L-elsbetiae_contig13265.2536.1 vs. uniprot
Match: A0A8K1CCZ2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CCZ2_PYTOL)

HSP 1 Score: 213 bits (543), Expect = 1.480e-66
Identity = 112/200 (56.00%), Postives = 145/200 (72.50%), Query Frame = 0
Query:    3 SLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKTEGGVHVLDG--AESLPHDVVQMLKTQDLGYVSTHRSADERKAARLRESLHMLDAGPRNKHTIFFDSEKEAKKFDAAKHFDTVPELAGRAFNRPRKKTLETAQVAGATNRRELKRVLKKRDASYSELVQRL 200
            SLRN VKR EHKER Q   R+KLGLLEKHKDYVLRAR+Y KK+DR++ +KLKAA +NPDEFYF M+  +TE GVHV +   +E L  + +++LKTQDL Y+   R+ D RKA +L + LH +DA   NKHT+F DS ++   FD A HFDT PELA RAFNR RK+TL+T  +   T++++L+ + K+RDA Y EL  RL
Sbjct:    2 SLRNVVKRREHKERGQLQERKKLGLLEKHKDYVLRARDYNKKQDRLRTMKLKAAFRNPDEFYFKMNTTRTEDGVHVSENNHSEKLSAEALKVLKTQDLAYLHMKRAVDLRKAEKLTQGLHFIDAPKNNKHTVFVDSSEDLNTFDVATHFDTAPELADRAFNRLRKETLKTTTIQATTDKKQLRALTKERDAVYRELNDRL 201          
BLAST of mRNA_L-elsbetiae_contig13265.2536.1 vs. uniprot
Match: A0A5D6XJY8_9STRA (U3 small nucleolar RNA-associated protein 11 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJY8_9STRA)

HSP 1 Score: 207 bits (526), Expect = 5.920e-64
Identity = 110/204 (53.92%), Postives = 141/204 (69.12%), Query Frame = 0
Query:    3 SLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKTEGGVHVLDG----AESLPHDVVQMLKTQDLGYVSTHRSADERKAARLRESLHMLDAGPRNKHTIFFDSEKEAKKFDAAKHFDTVPELAGRAFNRPRKKTLETAQVAGATNRRELKRVLKKRDASYSELVQRLER 202
            SLRN VKR EHKER QP  R+KLGLLEKHKDYV RAR+Y  K+DR++ ++LKAA +NPDEFYF M+  +TEGGVHV D      ++L  D +++LKTQD+ Y+   R+ D RKA +L   LH +DA   NKH +F DSE +  KFD A HFDT PELA RAFNR R   L+T  +   ++ +E+K+  ++RD  Y EL  RLER
Sbjct:    2 SLRNVVKRREHKERGQPQERKKLGLLEKHKDYVKRARDYNSKQDRLRTMQLKAAFRNPDEFYFRMNATRTEGGVHVSDNNRLDGKALTADALKVLKTQDVAYLHLKRAVDMRKAEKLNAGLHFIDAPTANKHVVFVDSEAQLAKFDVAAHFDTAPELADRAFNRVRMDALKTLALPAVSSAKEIKKRNRERDGVYRELSDRLER 205          
BLAST of mRNA_L-elsbetiae_contig13265.2536.1 vs. uniprot
Match: K3WAT9_GLOUD (U3 small nucleolar RNA-associated protein 11 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WAT9_GLOUD)

HSP 1 Score: 205 bits (522), Expect = 2.390e-63
Identity = 114/205 (55.61%), Postives = 146/205 (71.22%), Query Frame = 0
Query:    1 MSSLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKTEGGVHVL--DGAESLPHDVVQMLKTQDLGYVSTHRSADERKAARLRESLHMLDA-GPRNKHTIFFDSEKEAKKFDAAKHFDTVPELAGRAFNRPRKKTLETAQVAGATNRRELKRVLKKRDASYSELVQRLER 202
            MSSLRN VKR EHKER Q   R+KLGLLEKHKDYV RAR+Y KK+D ++AL +KAA +NPDEFYF M+  +TE GVHV   +  + L  + +++LKTQDL Y+   R+ D RKA +L E LH +DA G  NKH +F DS+ E + FD AKHFDTVPE+A RAFNR RK TL+T  +    +++ LK++  +RDA Y EL  RL+R
Sbjct:    1 MSSLRNVVKRREHKERGQLRERKKLGLLEKHKDYVKRARDYNKKQDHLKALAVKAAFRNPDEFYFRMNSTRTEDGVHVSTHNHHKQLSAEALKVLKTQDLAYLHMKRAVDLRKAEKLNEGLHFIDAAGKDNKHVVFVDSKDEVESFDVAKHFDTVPEIADRAFNRLRKDTLKTVSLPAVQDKKTLKKLGIERDAVYRELNDRLQR 205          
BLAST of mRNA_L-elsbetiae_contig13265.2536.1 vs. uniprot
Match: A0A7S2W8G3_9STRA (U3 small nucleolar RNA-associated protein 11 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W8G3_9STRA)

HSP 1 Score: 201 bits (511), Expect = 1.410e-61
Identity = 107/213 (50.23%), Postives = 151/213 (70.89%), Query Frame = 0
Query:    1 MSSLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKTEGGVHVL---DGAESLPHDVVQMLKTQDLGYVSTHRSADERKAARLRESLHMLDAGPRNKHTIFFDSEKEAKKFDAAKHFDTVPELAGRAFNRPRKKTLE--------TAQVAGATNRRELKRVLKKRDASYSELVQRLER 202
            M+SLRNA+ R  H+ER+Q ASR  LGLLEK KDYV RAR++ +K  +++ L+ KA  +NPDEFYF M  +KT+ GVHV    DGA+ L HD + ++K+QDLGY+S  ++ D+RK+ RL+  LHML   P N+HT+F D  K+ + FDAA+HFDT+PELAGRAFNRPR+K  E        +  V  +T+ ++ K+++K +D +Y +L +RLER
Sbjct:    1 MASLRNALPRRTHRERSQVASRAHLGLLEKKKDYVERARDFQRKTGKIKNLRKKARERNPDEFYFGMVNQKTKDGVHVAERNDGADKLSHDDILLMKSQDLGYLSMKKAVDDRKSERLQSGLHMLLDKPLNQHTVFLDKSKDVETFDAAEHFDTMPELAGRAFNRPRRKAFEADKEGSIASTPVMTSTSSKQYKKIMKSKDKAYEDLAERLER 213          
BLAST of mRNA_L-elsbetiae_contig13265.2536.1 vs. uniprot
Match: A0A7S1GYF8_HEMAN (U3 small nucleolar RNA-associated protein 11 n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1GYF8_HEMAN)

HSP 1 Score: 198 bits (504), Expect = 1.660e-60
Identity = 114/209 (54.55%), Postives = 143/209 (68.42%), Query Frame = 0
Query:    1 MSSLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKTEGGVHVLDGAESLPHDVVQMLKTQDLGYVSTHRSADERKAARLRESLHMLDA----GPRNKHTIFFDS--EKEAKKFDAAKHFDTVPELAGRAFNRPRKKTLETA-QVAGATNRRELKRVLKKRDASYSELVQRLER 202
            MSS+RNAVKR  HKERAQPASR++ GLLEKHKDYVLRAR++  K+ R+QAL+ KAA +NPDEFYF M    T+GGVH   G ESL  +   +LK+QDL Y+   +  DERK  RL  SLH + A    G  N+HT+FFDS  E E + FDA+KHFDT P L  RA NRPR + LE   + A   N++  K++ K R+  Y+EL+QR ER
Sbjct:    5 MSSIRNAVKRKTHKERAQPASRKRFGLLEKHKDYVLRARDHNLKKKRLQALQEKAAFRNPDEFYFKMQNMGTKGGVHTNVGGESLDMETALLLKSQDLNYIEMKKRVDERKIERLEASLHAIGAAEAGGRMNQHTLFFDSDDEDEMESFDASKHFDTHPSLVERAVNRPRMEQLEAEDEFAVRPNKKVRKKMEKLREGQYAELLQRKER 213          
BLAST of mRNA_L-elsbetiae_contig13265.2536.1 vs. uniprot
Match: D0NVW8_PHYIT (U3 small nucleolar RNA-associated protein 11 n=14 Tax=Phytophthora TaxID=4783 RepID=D0NVW8_PHYIT)

HSP 1 Score: 197 bits (500), Expect = 5.080e-60
Identity = 111/205 (54.15%), Postives = 140/205 (68.29%), Query Frame = 0
Query:    1 MSSLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKTEGGVHVL--DGAESLPHDVVQMLKTQDLGYVSTHRSADERKAARLRESLHMLDAGPRNKHTIFFDSEKEAKKFDAAKHFDTVPELAGRAFNRPRKKTLETAQVAG-ATNRRELKRVLKKRDASYSELVQRLER 202
            MSSLRN VKR EHKER Q   RRKLGLLEKHKDYV RAR+Y  K+ R++ L+LKAA++NPDEFY  M   KTEGGVHV   +  +S+  + ++ LKTQDL Y+   R+ D RKA RL   LH +DA   N HT+F D E++   FD A+HFDT PEL  RAFNR RK+ LETA++   A N ++  ++  ++DA Y EL  RL R
Sbjct:    1 MSSLRNVVKRREHKERGQLRERRKLGLLEKHKDYVKRARDYNSKQKRLKTLQLKAALRNPDEFYHRMRGTKTEGGVHVSTHNHIKSVETEALRTLKTQDLAYLHMKRAVDLRKAERLNRGLHFVDAPKNNNHTVFVDDEEQVDSFDVAEHFDTAPELVDRAFNRIRKRDLETAELPDLAANPKQKYKMQVEKDAMYRELRDRLAR 205          
BLAST of mRNA_L-elsbetiae_contig13265.2536.1 vs. uniprot
Match: A0A0P1B0R4_PLAHL (U3 small nucleolar RNA-associated protein 11 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B0R4_PLAHL)

HSP 1 Score: 195 bits (495), Expect = 2.900e-59
Identity = 109/205 (53.17%), Postives = 143/205 (69.76%), Query Frame = 0
Query:    1 MSSLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKTEGGVHVL--DGAESLPHDVVQMLKTQDLGYVSTHRSADERKAARLRESLHMLDAGPRNKHTIFFDSEKEAKKFDAAKHFDTVPELAGRAFNRPRKKTLETAQVAG-ATNRRELKRVLKKRDASYSELVQRLER 202
            MSSLRN VKR EHKER Q   RRKLGLLEKHKDYV RA++Y  K+ R++ L+LKAA++NPDEFY  MH  KTEGGVH+   +  +SL  + ++ LKTQDL Y+   R+ D RKA RL   LH +DA   NKHT+F D +++ + FD A++FDTVPELA RAFNR R++ LE  ++   A + ++  ++  +RDA Y EL  RL R
Sbjct:    1 MSSLRNVVKRREHKERGQLRDRRKLGLLEKHKDYVKRAQDYNSKQKRLKMLQLKAALRNPDEFYHRMHNNKTEGGVHISTHNHLKSLSTEALRTLKTQDLAYLHLKRAVDLRKAERLNRGLHFVDAPKDNKHTVFVDDKEQVENFDVAQYFDTVPELADRAFNRIRRRDLEMVELPDMAASPKQKYKMQVERDALYRELRDRLTR 205          
BLAST of mRNA_L-elsbetiae_contig13265.2536.1 vs. uniprot
Match: A0A3R7K0P1_9STRA (U3 small nucleolar RNA-associated protein 11 n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7K0P1_9STRA)

HSP 1 Score: 194 bits (492), Expect = 1.540e-58
Identity = 108/205 (52.68%), Postives = 141/205 (68.78%), Query Frame = 0
Query:    1 MSSLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKTEGGVHVL--DGAESLPHDVVQMLKTQDLGYVSTHRSADERKAARLRESLHMLDAGPRNKHTIFFDSEKEAKKFDAAKHFDTVPELAGRAFNRPRKKTLETAQVAG-ATNRRELKRVLKKRDASYSELVQRLER 202
            MSSLRN VKR EHKER Q   RRKLGLLEKHKDYV RA++Y +K+  ++ L+LKA+M+NPDEFY+ M   KTEGGVH+   + A+ L  + ++ LKTQDL Y+   R+ D RKA +L   LH +D    NKHT+F D + +  KFD A+HFDT PELA RAFNR RK  LET ++   A + ++  ++  ++DA Y EL  RLER
Sbjct:   22 MSSLRNVVKRREHKERGQLRERRKLGLLEKHKDYVKRAKDYNQKQKHLRNLQLKASMRNPDEFYYKMIHGKTEGGVHISTHNHAKQLNAEALRTLKTQDLAYLHMKRAVDLRKAEKLNRGLHFIDTPKNNKHTVFVDEDDDVNKFDVAEHFDTAPELADRAFNRLRKADLETMELPDLAADPKQKYKMQVEKDAMYRELRDRLER 226          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13265.2536.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNH1_ECTSI9.390e-12793.56U3 small nucleolar RNA-associated protein 11 n=2 T... [more]
A0A836CK24_9STRA1.910e-7961.39U3 small nucleolar RNA-associated protein 11 n=1 T... [more]
A0A8K1CCZ2_PYTOL1.480e-6656.00Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6XJY8_9STRA5.920e-6453.92U3 small nucleolar RNA-associated protein 11 n=1 T... [more]
K3WAT9_GLOUD2.390e-6355.61U3 small nucleolar RNA-associated protein 11 n=1 T... [more]
A0A7S2W8G3_9STRA1.410e-6150.23U3 small nucleolar RNA-associated protein 11 n=1 T... [more]
A0A7S1GYF8_HEMAN1.660e-6054.55U3 small nucleolar RNA-associated protein 11 n=1 T... [more]
D0NVW8_PHYIT5.080e-6054.15U3 small nucleolar RNA-associated protein 11 n=14 ... [more]
A0A0P1B0R4_PLAHL2.900e-5953.17U3 small nucleolar RNA-associated protein 11 n=1 T... [more]
A0A3R7K0P1_9STRA1.540e-5852.68U3 small nucleolar RNA-associated protein 11 n=4 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007144Small-subunit processome, Utp11PFAMPF03998Utp11coord: 11..202
e-value: 7.8E-60
score: 202.9
IPR007144Small-subunit processome, Utp11PIRSFPIRSF015952U3snoRNP11coord: 1..202
e-value: 9.8E-64
score: 212.9
IPR007144Small-subunit processome, Utp11PANTHERPTHR12838U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 11coord: 1..202

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13265contigL-elsbetiae_contig13265:372..3935 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13265.2536.1mRNA_L-elsbetiae_contig13265.2536.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig13265 372..3935 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig13265.2536.1 ID=prot_L-elsbetiae_contig13265.2536.1|Name=mRNA_L-elsbetiae_contig13265.2536.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=202bp
MSSLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQA
LKLKAAMKNPDEFYFAMHRKKTEGGVHVLDGAESLPHDVVQMLKTQDLGY
VSTHRSADERKAARLRESLHMLDAGPRNKHTIFFDSEKEAKKFDAAKHFD
TVPELAGRAFNRPRKKTLETAQVAGATNRRELKRVLKKRDASYSELVQRL
ER
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007144SSU_processome_Utp11