mRNA_L-elsbetiae_contig13265.2536.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig13265.2536.1 vs. uniprot
Match: D7FNH1_ECTSI (U3 small nucleolar RNA-associated protein 11 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNH1_ECTSI) HSP 1 Score: 366 bits (939), Expect = 9.390e-127 Identity = 189/202 (93.56%), Postives = 197/202 (97.52%), Query Frame = 1 Query: 1 MSSLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKTEGGVHVLDGAESLPHDVVQMLKTQDLGYVSTHRSADERKAARLRESLHMLDAGPRNKHTIFFDSEKEAKKFDAAKHFDTVPELAGRAFNRPRKKTLETAQVAGATNRRELKRVLKKRDASYSELVQRLER 606 MSSLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKTEGGVHVLDGAE+LPHDVVQ+LKTQDLGYVSTHRSADERKAA+LRESLHML+AGPRNKHTIFFDSEKEAK+FD AKHFDTVPELA RAFNRPRK TLE AQV GATNRR+LK+VLKKRDASYSEL+QRLER Sbjct: 1 MSSLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKTEGGVHVLDGAETLPHDVVQLLKTQDLGYVSTHRSADERKAAKLRESLHMLEAGPRNKHTIFFDSEKEAKEFDVAKHFDTVPELADRAFNRPRKDTLEKAQVTGATNRRQLKKVLKKRDASYSELMQRLER 202
BLAST of mRNA_L-elsbetiae_contig13265.2536.1 vs. uniprot
Match: A0A836CK24_9STRA (U3 small nucleolar RNA-associated protein 11 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK24_9STRA) HSP 1 Score: 246 bits (628), Expect = 1.910e-79 Identity = 124/202 (61.39%), Postives = 157/202 (77.72%), Query Frame = 1 Query: 1 MSSLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKTEGGVHVLDGAESLPHDVVQMLKTQDLGYVSTHRSADERKAARLRESLHMLDAGPRNKHTIFFDSEKEAKKFDAAKHFDTVPELAGRAFNRPRKKTLETAQVAGATNRRELKRVLKKRDASYSELVQRLER 606 MSSLRNAVKR HKERAQPASR K GLLEKH DYVLRAR+Y KRDR+ AL+LKA+++NPDEFYF MH+ KT+ GVH ++G+ SL H+ MLKTQD+ Y+ R+ D +KA RL+ LHMLDA P+N HT+F ++++ + FDAA++FDT PELAGR FNRPR TLE+ QV GA +R +LK+ LK+RDA+Y E+ R ER Sbjct: 1 MSSLRNAVKRKTHKERAQPASRSKFGLLEKHSDYVLRARDYNAKRDRLNALRLKASLRNPDEFYFGMHKAKTKEGVHQVEGSSSLDHETAHMLKTQDMAYIHMKRAVDIKKAERLKAGLHMLDAPPQNTHTVFVKNKRQRRAFDAAEYFDTAPELAGRTFNRPRMATLESKQVLGAESRADLKKALKQRDAAYQEVEAREER 202
BLAST of mRNA_L-elsbetiae_contig13265.2536.1 vs. uniprot
Match: A0A8K1CCZ2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CCZ2_PYTOL) HSP 1 Score: 213 bits (543), Expect = 1.480e-66 Identity = 112/200 (56.00%), Postives = 145/200 (72.50%), Query Frame = 1 Query: 7 SLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKTEGGVHVLDG--AESLPHDVVQMLKTQDLGYVSTHRSADERKAARLRESLHMLDAGPRNKHTIFFDSEKEAKKFDAAKHFDTVPELAGRAFNRPRKKTLETAQVAGATNRRELKRVLKKRDASYSELVQRL 600 SLRN VKR EHKER Q R+KLGLLEKHKDYVLRAR+Y KK+DR++ +KLKAA +NPDEFYF M+ +TE GVHV + +E L + +++LKTQDL Y+ R+ D RKA +L + LH +DA NKHT+F DS ++ FD A HFDT PELA RAFNR RK+TL+T + T++++L+ + K+RDA Y EL RL Sbjct: 2 SLRNVVKRREHKERGQLQERKKLGLLEKHKDYVLRARDYNKKQDRLRTMKLKAAFRNPDEFYFKMNTTRTEDGVHVSENNHSEKLSAEALKVLKTQDLAYLHMKRAVDLRKAEKLTQGLHFIDAPKNNKHTVFVDSSEDLNTFDVATHFDTAPELADRAFNRLRKETLKTTTIQATTDKKQLRALTKERDAVYRELNDRL 201
BLAST of mRNA_L-elsbetiae_contig13265.2536.1 vs. uniprot
Match: A0A5D6XJY8_9STRA (U3 small nucleolar RNA-associated protein 11 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJY8_9STRA) HSP 1 Score: 207 bits (526), Expect = 5.920e-64 Identity = 110/204 (53.92%), Postives = 141/204 (69.12%), Query Frame = 1 Query: 7 SLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKTEGGVHVLDG----AESLPHDVVQMLKTQDLGYVSTHRSADERKAARLRESLHMLDAGPRNKHTIFFDSEKEAKKFDAAKHFDTVPELAGRAFNRPRKKTLETAQVAGATNRRELKRVLKKRDASYSELVQRLER 606 SLRN VKR EHKER QP R+KLGLLEKHKDYV RAR+Y K+DR++ ++LKAA +NPDEFYF M+ +TEGGVHV D ++L D +++LKTQD+ Y+ R+ D RKA +L LH +DA NKH +F DSE + KFD A HFDT PELA RAFNR R L+T + ++ +E+K+ ++RD Y EL RLER Sbjct: 2 SLRNVVKRREHKERGQPQERKKLGLLEKHKDYVKRARDYNSKQDRLRTMQLKAAFRNPDEFYFRMNATRTEGGVHVSDNNRLDGKALTADALKVLKTQDVAYLHLKRAVDMRKAEKLNAGLHFIDAPTANKHVVFVDSEAQLAKFDVAAHFDTAPELADRAFNRVRMDALKTLALPAVSSAKEIKKRNRERDGVYRELSDRLER 205
BLAST of mRNA_L-elsbetiae_contig13265.2536.1 vs. uniprot
Match: K3WAT9_GLOUD (U3 small nucleolar RNA-associated protein 11 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WAT9_GLOUD) HSP 1 Score: 205 bits (522), Expect = 2.390e-63 Identity = 114/205 (55.61%), Postives = 146/205 (71.22%), Query Frame = 1 Query: 1 MSSLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKTEGGVHVL--DGAESLPHDVVQMLKTQDLGYVSTHRSADERKAARLRESLHMLDA-GPRNKHTIFFDSEKEAKKFDAAKHFDTVPELAGRAFNRPRKKTLETAQVAGATNRRELKRVLKKRDASYSELVQRLER 606 MSSLRN VKR EHKER Q R+KLGLLEKHKDYV RAR+Y KK+D ++AL +KAA +NPDEFYF M+ +TE GVHV + + L + +++LKTQDL Y+ R+ D RKA +L E LH +DA G NKH +F DS+ E + FD AKHFDTVPE+A RAFNR RK TL+T + +++ LK++ +RDA Y EL RL+R Sbjct: 1 MSSLRNVVKRREHKERGQLRERKKLGLLEKHKDYVKRARDYNKKQDHLKALAVKAAFRNPDEFYFRMNSTRTEDGVHVSTHNHHKQLSAEALKVLKTQDLAYLHMKRAVDLRKAEKLNEGLHFIDAAGKDNKHVVFVDSKDEVESFDVAKHFDTVPEIADRAFNRLRKDTLKTVSLPAVQDKKTLKKLGIERDAVYRELNDRLQR 205
BLAST of mRNA_L-elsbetiae_contig13265.2536.1 vs. uniprot
Match: A0A7S2W8G3_9STRA (U3 small nucleolar RNA-associated protein 11 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W8G3_9STRA) HSP 1 Score: 201 bits (511), Expect = 1.410e-61 Identity = 107/213 (50.23%), Postives = 151/213 (70.89%), Query Frame = 1 Query: 1 MSSLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKTEGGVHVL---DGAESLPHDVVQMLKTQDLGYVSTHRSADERKAARLRESLHMLDAGPRNKHTIFFDSEKEAKKFDAAKHFDTVPELAGRAFNRPRKKTLE--------TAQVAGATNRRELKRVLKKRDASYSELVQRLER 606 M+SLRNA+ R H+ER+Q ASR LGLLEK KDYV RAR++ +K +++ L+ KA +NPDEFYF M +KT+ GVHV DGA+ L HD + ++K+QDLGY+S ++ D+RK+ RL+ LHML P N+HT+F D K+ + FDAA+HFDT+PELAGRAFNRPR+K E + V +T+ ++ K+++K +D +Y +L +RLER Sbjct: 1 MASLRNALPRRTHRERSQVASRAHLGLLEKKKDYVERARDFQRKTGKIKNLRKKARERNPDEFYFGMVNQKTKDGVHVAERNDGADKLSHDDILLMKSQDLGYLSMKKAVDDRKSERLQSGLHMLLDKPLNQHTVFLDKSKDVETFDAAEHFDTMPELAGRAFNRPRRKAFEADKEGSIASTPVMTSTSSKQYKKIMKSKDKAYEDLAERLER 213
BLAST of mRNA_L-elsbetiae_contig13265.2536.1 vs. uniprot
Match: A0A7S1GYF8_HEMAN (U3 small nucleolar RNA-associated protein 11 n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1GYF8_HEMAN) HSP 1 Score: 198 bits (504), Expect = 1.660e-60 Identity = 114/209 (54.55%), Postives = 143/209 (68.42%), Query Frame = 1 Query: 1 MSSLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKTEGGVHVLDGAESLPHDVVQMLKTQDLGYVSTHRSADERKAARLRESLHMLDA----GPRNKHTIFFDS--EKEAKKFDAAKHFDTVPELAGRAFNRPRKKTLETA-QVAGATNRRELKRVLKKRDASYSELVQRLER 606 MSS+RNAVKR HKERAQPASR++ GLLEKHKDYVLRAR++ K+ R+QAL+ KAA +NPDEFYF M T+GGVH G ESL + +LK+QDL Y+ + DERK RL SLH + A G N+HT+FFDS E E + FDA+KHFDT P L RA NRPR + LE + A N++ K++ K R+ Y+EL+QR ER Sbjct: 5 MSSIRNAVKRKTHKERAQPASRKRFGLLEKHKDYVLRARDHNLKKKRLQALQEKAAFRNPDEFYFKMQNMGTKGGVHTNVGGESLDMETALLLKSQDLNYIEMKKRVDERKIERLEASLHAIGAAEAGGRMNQHTLFFDSDDEDEMESFDASKHFDTHPSLVERAVNRPRMEQLEAEDEFAVRPNKKVRKKMEKLREGQYAELLQRKER 213
BLAST of mRNA_L-elsbetiae_contig13265.2536.1 vs. uniprot
Match: D0NVW8_PHYIT (U3 small nucleolar RNA-associated protein 11 n=14 Tax=Phytophthora TaxID=4783 RepID=D0NVW8_PHYIT) HSP 1 Score: 197 bits (500), Expect = 5.080e-60 Identity = 111/205 (54.15%), Postives = 140/205 (68.29%), Query Frame = 1 Query: 1 MSSLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKTEGGVHVL--DGAESLPHDVVQMLKTQDLGYVSTHRSADERKAARLRESLHMLDAGPRNKHTIFFDSEKEAKKFDAAKHFDTVPELAGRAFNRPRKKTLETAQVAG-ATNRRELKRVLKKRDASYSELVQRLER 606 MSSLRN VKR EHKER Q RRKLGLLEKHKDYV RAR+Y K+ R++ L+LKAA++NPDEFY M KTEGGVHV + +S+ + ++ LKTQDL Y+ R+ D RKA RL LH +DA N HT+F D E++ FD A+HFDT PEL RAFNR RK+ LETA++ A N ++ ++ ++DA Y EL RL R Sbjct: 1 MSSLRNVVKRREHKERGQLRERRKLGLLEKHKDYVKRARDYNSKQKRLKTLQLKAALRNPDEFYHRMRGTKTEGGVHVSTHNHIKSVETEALRTLKTQDLAYLHMKRAVDLRKAERLNRGLHFVDAPKNNNHTVFVDDEEQVDSFDVAEHFDTAPELVDRAFNRIRKRDLETAELPDLAANPKQKYKMQVEKDAMYRELRDRLAR 205
BLAST of mRNA_L-elsbetiae_contig13265.2536.1 vs. uniprot
Match: A0A0P1B0R4_PLAHL (U3 small nucleolar RNA-associated protein 11 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B0R4_PLAHL) HSP 1 Score: 195 bits (495), Expect = 2.900e-59 Identity = 109/205 (53.17%), Postives = 143/205 (69.76%), Query Frame = 1 Query: 1 MSSLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKTEGGVHVL--DGAESLPHDVVQMLKTQDLGYVSTHRSADERKAARLRESLHMLDAGPRNKHTIFFDSEKEAKKFDAAKHFDTVPELAGRAFNRPRKKTLETAQVAG-ATNRRELKRVLKKRDASYSELVQRLER 606 MSSLRN VKR EHKER Q RRKLGLLEKHKDYV RA++Y K+ R++ L+LKAA++NPDEFY MH KTEGGVH+ + +SL + ++ LKTQDL Y+ R+ D RKA RL LH +DA NKHT+F D +++ + FD A++FDTVPELA RAFNR R++ LE ++ A + ++ ++ +RDA Y EL RL R Sbjct: 1 MSSLRNVVKRREHKERGQLRDRRKLGLLEKHKDYVKRAQDYNSKQKRLKMLQLKAALRNPDEFYHRMHNNKTEGGVHISTHNHLKSLSTEALRTLKTQDLAYLHLKRAVDLRKAERLNRGLHFVDAPKDNKHTVFVDDKEQVENFDVAQYFDTVPELADRAFNRIRRRDLEMVELPDMAASPKQKYKMQVERDALYRELRDRLTR 205
BLAST of mRNA_L-elsbetiae_contig13265.2536.1 vs. uniprot
Match: A0A3R7K0P1_9STRA (U3 small nucleolar RNA-associated protein 11 n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7K0P1_9STRA) HSP 1 Score: 194 bits (492), Expect = 1.540e-58 Identity = 108/205 (52.68%), Postives = 141/205 (68.78%), Query Frame = 1 Query: 1 MSSLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKTEGGVHVL--DGAESLPHDVVQMLKTQDLGYVSTHRSADERKAARLRESLHMLDAGPRNKHTIFFDSEKEAKKFDAAKHFDTVPELAGRAFNRPRKKTLETAQVAG-ATNRRELKRVLKKRDASYSELVQRLER 606 MSSLRN VKR EHKER Q RRKLGLLEKHKDYV RA++Y +K+ ++ L+LKA+M+NPDEFY+ M KTEGGVH+ + A+ L + ++ LKTQDL Y+ R+ D RKA +L LH +D NKHT+F D + + KFD A+HFDT PELA RAFNR RK LET ++ A + ++ ++ ++DA Y EL RLER Sbjct: 22 MSSLRNVVKRREHKERGQLRERRKLGLLEKHKDYVKRAKDYNQKQKHLRNLQLKASMRNPDEFYYKMIHGKTEGGVHISTHNHAKQLNAEALRTLKTQDLAYLHMKRAVDLRKAEKLNRGLHFIDTPKNNKHTVFVDEDDDVNKFDVAEHFDTAPELADRAFNRLRKADLETMELPDLAADPKQKYKMQVEKDAMYRELRDRLER 226 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13265.2536.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig13265.2536.1 >prot_L-elsbetiae_contig13265.2536.1 ID=prot_L-elsbetiae_contig13265.2536.1|Name=mRNA_L-elsbetiae_contig13265.2536.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=202bp MSSLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQAback to top mRNA from alignment at L-elsbetiae_contig13265:372..3935- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig13265.2536.1 ID=mRNA_L-elsbetiae_contig13265.2536.1|Name=mRNA_L-elsbetiae_contig13265.2536.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3564bp|location=Sequence derived from alignment at L-elsbetiae_contig13265:372..3935- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig13265:372..3935- >mRNA_L-elsbetiae_contig13265.2536.1 ID=mRNA_L-elsbetiae_contig13265.2536.1|Name=mRNA_L-elsbetiae_contig13265.2536.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1212bp|location=Sequence derived from alignment at L-elsbetiae_contig13265:372..3935- (Laminarionema elsbetiae ELsaHSoW15)back to top |