prot_L-elsbetiae_contig1326.2530.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1326.2530.1
Unique Nameprot_L-elsbetiae_contig1326.2530.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length872
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1326.2530.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 25..235
e-value: 6.6E-13
score: 49.8
coord: 456..670
e-value: 1.4E-7
score: 32.2
IPR008615FNIPPFAMPF05725FNIPcoord: 552..594
e-value: 9.5E-5
score: 22.5
coord: 170..212
e-value: 1.1E-8
score: 35.1
coord: 600..641
e-value: 6.1E-5
score: 23.1
coord: 322..364
e-value: 4.1E-5
score: 23.7
coord: 371..413
e-value: 2.0E-6
score: 27.9
coord: 779..821
e-value: 1.9E-6
score: 27.9
coord: 732..773
e-value: 9.0E-8
score: 32.2
coord: 38..79
e-value: 2.0E-8
score: 34.2
coord: 644..686
e-value: 1.7E-8
score: 34.5
coord: 278..319
e-value: 4.8E-5
score: 23.4
coord: 688..730
e-value: 5.8E-6
score: 26.4
coord: 415..458
e-value: 7.1E-5
score: 22.9
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 112..318
coord: 539..773
coord: 25..232
coord: 308..534
coord: 653..849
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 247..643
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 16..318

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1326contigL-elsbetiae_contig1326:3297..5912 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1326.2530.1mRNA_L-elsbetiae_contig1326.2530.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1326 3186..6656 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1326.2530.1 ID=prot_L-elsbetiae_contig1326.2530.1|Name=mRNA_L-elsbetiae_contig1326.2530.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=872bp
MSFLGGGSIDYGGGGFSQPIAGVAWPASLEKLSFGGYFNQPIKDVLWPAS
LQKLSFGNSFNQPIEDVVWPASLQYLNLGGVNHPMAGVQWPASLEQLTLG
FNFDQPIIDVIWPASLQHLTLGEGFDQTVAGVVWPESMQQLSMGCNFNQP
IVEVSWPESLQQLTLGECRFNQTIVGVTWPRSLQALHLGYDFNQPISGDV
WPANLKKLTFGRSSHQPNEEIVWPVSLEDLTLYGDIPIAGVRWGASLQTL
TLEGRFNQPIVDIVWPASLQRLTLGDQFNQTLVGAAWPESLQHLSLGYCF
NQPIVGVTWPDSLQQLSFPHGFNQPIVGVVWPDPLQKLSFPPSFNQPIVE
VVWPDSLQQLSLGSTWGRDTFNQPIAGAVWPDSLQQLSLGKIFNQSIIDV
VWPESLQQLRFGDRFNQPIVGVVWPEHLKQLTFGRSFKQSIVGVAWPQCL
QQLVFGNFLDQSMEEVIWPGSLQGLWLPKGFNQPIAGVVWPASLQWLTFG
PCYHWSTLDRPTIEIVGSESLRQLSFGDAFNQSIVGVVWPESLQVLHLGF
SFDQPIAGVVWPEHLQVLDLGGKFNQSLVDVAWPDSLKQLQFGKRWGNKF
DQPIAGVVWPEHLQALDLGEKFNQSIVDVVWPESLKQLKFGRAFNQPIIG
VAFPKLLQQLEFGRTFNQPIIGVAFPKLLQQLEFGTSFNQPISEVAWPQF
LQQLTFDDNFDQPIVGVAWPDSLQELSFPKSFNQPIAGTVWPKSLQHLSF
GQSFDQPIVEVAWPASLQQLEFGGGLGKFNQPIVGVAWPEHLQVLILGGR
FNQAILKVAWPESLRVLELGEKFHQSISGIVWPESLVSLRFGRGQQQIPR
TKVVAQDDASFHHSTTVSEAN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR008615FNIP