prot_L-elsbetiae_contig13252.2529.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig13252.2529.1
Unique Nameprot_L-elsbetiae_contig13252.2529.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length176
Homology
BLAST of mRNA_L-elsbetiae_contig13252.2529.1 vs. uniprot
Match: D7G0W4_ECTSI (ABC transmembrane type-1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0W4_ECTSI)

HSP 1 Score: 256 bits (653), Expect = 1.810e-80
Identity = 144/176 (81.82%), Postives = 152/176 (86.36%), Query Frame = 0
Query:    1 MVVVTLLFMFYLSWRLSLVAFISVPAIVTVSKLYGNYIRKLSKLSQDKLAEAGSVAEESLGSMTTVRSFAAEGRESREYAGKLQDPPXXXXXXXXXDLRLRTPLYYVLSKKGGYAYGFYAASFVLLPNLVTAVVLFYGGQLVMQGQVTGGKVVSFMIYLTSLSDGFNDMASIFSSM 176
            MVVVTLLFMFYLSWRLSLVAFISVPAIV VSK YG YIRKLSKLSQDKLAEAGSVAEESLGSM+TVRSFAAEGRES+EYA KLQD               R   +YVLSK+G YAYGFYA+S+VLLPNLVTAVVLFYGGQLVM GQ+TGGKVVSFMIYLTSLSDGFNDMA+IFSSM
Sbjct:  214 MVVVTLLFMFYLSWRLSLVAFISVPAIVIVSKWYGEYIRKLSKLSQDKLAEAGSVAEESLGSMSTVRSFAAEGRESKEYAKKLQDRTPTSPTLPHTSYTSRLS-FYVLSKRGSYAYGFYASSYVLLPNLVTAVVLFYGGQLVMDGQITGGKVVSFMIYLTSLSDGFNDMAAIFSSM 388          
BLAST of mRNA_L-elsbetiae_contig13252.2529.1 vs. uniprot
Match: A0A835YSY9_9STRA (ABC transporter type 1, transmembrane domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSY9_9STRA)

HSP 1 Score: 182 bits (462), Expect = 6.050e-51
Identity = 102/172 (59.30%), Postives = 127/172 (73.84%), Query Frame = 0
Query:    5 TLLFMFYLSWRLSLVAFISVPAIVTVSKLYGNYIRKLSKLSQDKLAEAGSVAEESLGSMTTVRSFAAEGRESREYAGKLQDPPXXXXXXXXXDLRLRTPLYYVLSKKGGYAYGFYAASFVLLPNLVTAVVLFYGGQLVMQGQVTGGKVVSFMIYLTSLSDGFNDMASIFSSM 176
            TLLFMFYLSWRLS VAF+SVPAIV VS+ YG++IR L+K  Q++LAEA +VAEE+LGSMTTVRSFAAEGRES  Y  +L D                   YY L+ +   AYG YA++  LLP LVT +VLFYGG++V+ GQ+ GG VV+FM+YL+SLSDGFN+M +IFSS+
Sbjct:  212 TLLFMFYLSWRLSTVAFVSVPAIVGVSRYYGHFIRDLAKQVQERLAEANAVAEEALGSMTTVRSFAAEGRESAAYGARLHD-------------------YYALAIREAAAYGAYASTAALLPQLVTVLVLFYGGRMVLAGQLDGGSVVAFMLYLSSLSDGFNNMGAIFSSI 364          
BLAST of mRNA_L-elsbetiae_contig13252.2529.1 vs. uniprot
Match: A0A7S4DAM6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DAM6_HETAK)

HSP 1 Score: 161 bits (408), Expect = 2.720e-47
Identity = 88/172 (51.16%), Postives = 121/172 (70.35%), Query Frame = 0
Query:    5 TLLFMFYLSWRLSLVAFISVPAIVTVSKLYGNYIRKLSKLSQDKLAEAGSVAEESLGSMTTVRSFAAEGRESREYAGKLQDPPXXXXXXXXXDLRLRTPLYYVLSKKGGYAYGFYAASFVLLPNLVTAVVLFYGGQLVMQGQVTGGKVVSFMIYLTSLSDGFNDMASIFSSM 176
            TL+FMFYLSW++S+VAF+SVP IV +SK YG Y++KLSK +QD LA+A + AEE+L SMTT+RSFA E  E+ EYA +L                    +YY L+ +  + Y FYA S V LP  VTA+VL YGG+LV++G+++ GK+V+F++YL SLS+ F+ M SIFSS+
Sbjct:   24 TLMFMFYLSWKISMVAFVSVPVIVLISKFYGRYLQKLSKKTQDALADANTTAEETLSSMTTIRSFACEDCEALEYARRLG-------------------VYYALNIQEAWCYSFYAMSTVFLPQSVTALVLLYGGRLVLEGEISSGKLVTFLLYLGSLSEAFSTMGSIFSSI 176          
BLAST of mRNA_L-elsbetiae_contig13252.2529.1 vs. uniprot
Match: W7TKE5_9STRA (Atp-binding cassette sub-family b member 9 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TKE5_9STRA)

HSP 1 Score: 158 bits (400), Expect = 1.130e-41
Identity = 94/173 (54.34%), Postives = 120/173 (69.36%), Query Frame = 0
Query:    5 TLLFMFYLSWRLSLVAFISVPAIVTVSKLYGNYIRKLSKLSQDKLAEAGSVAEESLGSMTTVRSFAAEGRESREYAGKLQDPPXXXXXXXXXDLRLRTPLYYVLSKKGGYAYGFYAASFVLLPNLVTAVVLFYGGQLVM-QGQVTGGKVVSFMIYLTSLSDGFNDMASIFSSM 176
            TL+FMF  SW+LSLVAF+SVP IV +SK+YG YIRKLSK +Q++LA A S+AEE L +M TVRSFA    + R Y GKL +                   YY L+K+   AYG YA +  LLPNLVTA+VLFYGGQLV+ Q  +T G++VSF++ L SLS+GF++M SIFSS+
Sbjct:  488 TLIFMFIQSWKLSLVAFVSVPVIVIMSKIYGQYIRKLSKATQERLAHANSIAEECLSTMPTVRSFAGGPAQGRLYRGKLDE-------------------YYDLNKQEARAYGAYAVATTLLPNLVTALVLFYGGQLVLNQDGLTSGQLVSFLLLLGSLSEGFSNMGSIFSSI 641          
BLAST of mRNA_L-elsbetiae_contig13252.2529.1 vs. uniprot
Match: A0A7S1CY43_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CY43_CYCTE)

HSP 1 Score: 136 bits (342), Expect = 2.480e-37
Identity = 82/175 (46.86%), Postives = 108/175 (61.71%), Query Frame = 0
Query:    2 VVVTLLFMFYLSWRLSLVAFISVPAIVTVSKLYGNYIRKLSKLSQDKLAEAGSVAEESLGSMTTVRSFAAEGRESREYAGKLQDPPXXXXXXXXXDLRLRTPLYYVLSKKGGYAYGFYAASFVLLPNLVTAVVLFYGGQLVMQGQVTGGKVVSFMIYLTSLSDGFNDMASIFSSM 176
            V+  L+FMF  SW+LSL+AF+SVP I  +SK YG ++RKLSKL Q KLA+  SV+E ++GSM TVR+F A   E +E+   +Q+                   Y  L+ +   AY  Y  + V  PNLVTAVVLFYGG LV  G +T G +VSF++YL SLSD F  +  IFSS+
Sbjct:   11 VIGVLIFMFLSSWQLSLIAFVSVPVITILSKWYGEFVRKLSKLMQKKLADGNSVSEAAMGSMATVRAFDAAESELKEFQKCMQE-------------------YLGLNVRSSVAYFAYCTAVVAQPNLVTAVVLFYGGLLVRNGDMTSGDLVSFLLYLQSLSDAFGSIGYIFSSL 166          
BLAST of mRNA_L-elsbetiae_contig13252.2529.1 vs. uniprot
Match: A0A1E7FK35_9STRA (p-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FK35_9STRA)

HSP 1 Score: 137 bits (345), Expect = 8.200e-35
Identity = 80/175 (45.71%), Postives = 110/175 (62.86%), Query Frame = 0
Query:    2 VVVTLLFMFYLSWRLSLVAFISVPAIVTVSKLYGNYIRKLSKLSQDKLAEAGSVAEESLGSMTTVRSFAAEGRESREYAGKLQDPPXXXXXXXXXDLRLRTPLYYVLSKKGGYAYGFYAASFVLLPNLVTAVVLFYGGQLVMQGQVTGGKVVSFMIYLTSLSDGFNDMASIFSSM 176
            V+  L+FMF +SW+LSL+AFISVP I  +SK YGN++R L+K+ Q KLA+  SV+E ++ SM TVR+F A   E RE+ G + +                   Y  L+ K   AY  YA     LP LVTA+V+FYGG LV  G ++ G++VSF++YL SLSDGF+ +  IFSS+
Sbjct:   89 VIGVLIFMFMVSWQLSLLAFISVPVITVLSKWYGNFVRSLTKVMQTKLAQGNSVSEAAISSMPTVRAFDAGPTEYREFKGHMDE-------------------YLALNTKSAIAYSGYATVSTSLPQLVTALVVFYGGLLVRNGDISSGELVSFLLYLQSLSDGFSSIGYIFSSL 244          
BLAST of mRNA_L-elsbetiae_contig13252.2529.1 vs. uniprot
Match: A0A7S4R242_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R242_9STRA)

HSP 1 Score: 132 bits (331), Expect = 1.550e-32
Identity = 79/171 (46.20%), Postives = 107/171 (62.57%), Query Frame = 0
Query:    6 LLFMFYLSWRLSLVAFISVPAIVTVSKLYGNYIRKLSKLSQDKLAEAGSVAEESLGSMTTVRSFAAEGRESREYAGKLQDPPXXXXXXXXXDLRLRTPLYYVLSKKGGYAYGFYAASFVLLPNLVTAVVLFYGGQLVMQGQVTGGKVVSFMIYLTSLSDGFNDMASIFSSM 176
            L+FMF +SW+LSL+AFISVP I   SK YGNY++KL+K+   KLA+  +V+E ++GSM TVR+F AE  E  E+   +                     Y  ++ +  YAY  Y +    LP LVTAVVLFYGG LV   Q+T G++VSF++YL SLSD FN + +IFSS+
Sbjct:  360 LIFMFIISWQLSLLAFISVPLITLFSKWYGNYMQKLTKVMNKKLADGNAVSEAAVGSMPTVRAFGAETSELDEFNKHMGQ-------------------YLSINLRSAYAYLGYCSCITSLPQLVTAVVLFYGGLLVEDRQMTSGELVSFILYLNSLSDAFNTIGNIFSSL 511          
BLAST of mRNA_L-elsbetiae_contig13252.2529.1 vs. uniprot
Match: A0A7S4QZM3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QZM3_9STRA)

HSP 1 Score: 132 bits (331), Expect = 2.060e-32
Identity = 79/171 (46.20%), Postives = 107/171 (62.57%), Query Frame = 0
Query:    6 LLFMFYLSWRLSLVAFISVPAIVTVSKLYGNYIRKLSKLSQDKLAEAGSVAEESLGSMTTVRSFAAEGRESREYAGKLQDPPXXXXXXXXXDLRLRTPLYYVLSKKGGYAYGFYAASFVLLPNLVTAVVLFYGGQLVMQGQVTGGKVVSFMIYLTSLSDGFNDMASIFSSM 176
            L+FMF +SW+LSL+AFISVP I   SK YGNY++KL+K+   KLA+  +V+E ++GSM TVR+F AE  E  E+   +                     Y  ++ +  YAY  Y +    LP LVTAVVLFYGG LV   Q+T G++VSF++YL SLSD FN + +IFSS+
Sbjct:  360 LIFMFIISWQLSLLAFISVPLITLFSKWYGNYMQKLTKVMNKKLADGNAVSEAAVGSMPTVRAFGAETSELDEFNKHMGQ-------------------YLSINLRSAYAYLGYCSCITSLPQLVTAVVLFYGGLLVEDRQMTSGELVSFILYLNSLSDAFNTIGNIFSSL 511          
BLAST of mRNA_L-elsbetiae_contig13252.2529.1 vs. uniprot
Match: A0A6U3T7I6_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3T7I6_9STRA)

HSP 1 Score: 132 bits (331), Expect = 2.210e-32
Identity = 79/171 (46.20%), Postives = 107/171 (62.57%), Query Frame = 0
Query:    6 LLFMFYLSWRLSLVAFISVPAIVTVSKLYGNYIRKLSKLSQDKLAEAGSVAEESLGSMTTVRSFAAEGRESREYAGKLQDPPXXXXXXXXXDLRLRTPLYYVLSKKGGYAYGFYAASFVLLPNLVTAVVLFYGGQLVMQGQVTGGKVVSFMIYLTSLSDGFNDMASIFSSM 176
            L+FMF +SW+LSL+AFISVP I   SK YGNY++KL+K+   KLA+  +V+E ++GSM TVR+F AE  E  E+   +                     Y  ++ +  YAY  Y +    LP LVTAVVLFYGG LV   Q+T G++VSF++YL SLSD FN + +IFSS+
Sbjct:  503 LIFMFIISWQLSLLAFISVPLITLFSKWYGNYMQKLTKVMNKKLADGNAVSEAAVGSMPTVRAFGAETSELDEFNKHMGQ-------------------YLSINLRSAYAYLGYCSCITSLPQLVTAVVLFYGGLLVEDRQMTSGELVSFILYLNSLSDAFNTIGNIFSSL 654          
BLAST of mRNA_L-elsbetiae_contig13252.2529.1 vs. uniprot
Match: A0A7S0C0B0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C0B0_9STRA)

HSP 1 Score: 127 bits (318), Expect = 5.100e-32
Identity = 76/174 (43.68%), Postives = 113/174 (64.94%), Query Frame = 0
Query:    6 LLFMFYLSWRLSLVAFISVPAIVTVSKLYGNYIRKLSKLSQDKLAEAGSVAEESLGSMTTVRSFAAEGRESREYAGKLQDPPXXXXXXXXXDLRLRTPLYYVLSKKGGYAYGFYAASFVLLPNLVTAVVLFYGGQLVMQG---QVTGGKVVSFMIYLTSLSDGFNDMASIFSSM 176
            L+FMF++SW+LS++A IS+P+I+ +SK YG Y+R+L+KL Q KLA+  S++E ++GSM+TVR+F AE  E   Y  K  D                   Y VL+ +G +AY  Y      LP LVT +VLFYGG LV+     Q++ G++V+F++YL+SLSD FN++ +I SS+
Sbjct:   75 LIFMFFISWQLSMLALISIPSILLLSKTYGAYMRRLTKLQQKKLADGNSLSEAAIGSMSTVRAFGAEASEMIGYE-KCMDQ------------------YLVLTVRGAFAYVGYMFFMASLPYLVTCLVLFYGGLLVVSDGDDQISSGQLVTFILYLSSLSDAFNNLGNIMSSL 229          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13252.2529.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0W4_ECTSI1.810e-8081.82ABC transmembrane type-1 domain-containing protein... [more]
A0A835YSY9_9STRA6.050e-5159.30ABC transporter type 1, transmembrane domain-conta... [more]
A0A7S4DAM6_HETAK2.720e-4751.16Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
W7TKE5_9STRA1.130e-4154.34Atp-binding cassette sub-family b member 9 n=1 Tax... [more]
A0A7S1CY43_CYCTE2.480e-3746.86Hypothetical protein (Fragment) n=1 Tax=Cyclophora... [more]
A0A1E7FK35_9STRA8.200e-3545.71p-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S4R242_9STRA1.550e-3246.20Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S4QZM3_9STRA2.060e-3246.20Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A6U3T7I6_9STRA2.210e-3246.20Hypothetical protein n=3 Tax=Ditylum brightwellii ... [more]
A0A7S0C0B0_9STRA5.100e-3243.68Hypothetical protein (Fragment) n=1 Tax=Proboscia ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036640ABC transporter type 1, transmembrane domain superfamilyGENE3D1.20.1560.10coord: 1..176
e-value: 6.9E-43
score: 149.1
IPR036640ABC transporter type 1, transmembrane domain superfamilySUPERFAMILY90123ABC transporter transmembrane regioncoord: 105..175
IPR036640ABC transporter type 1, transmembrane domain superfamilySUPERFAMILY90123ABC transporter transmembrane regioncoord: 1..85
IPR011527ABC transporter type 1, transmembrane domainPFAMPF00664ABC_membranecoord: 1..85
e-value: 2.6E-19
score: 69.9
IPR011527ABC transporter type 1, transmembrane domainPROSITEPS50929ABC_TM1Fcoord: 1..176
score: 28.464
IPR039421Type I protein exporterPANTHERPTHR24221FAMILY NOT NAMEDcoord: 106..175
coord: 3..85
IPR030254ATP-binding cassette subfamily B member 9PANTHERPTHR24221:SF242ATP-BINDING CASSETTE SUB-FAMILY B MEMBER 9coord: 106..175
coord: 3..85
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 138..176
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 35..115
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..34
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 116..137
NoneNo IPR availableSUPERFAMILY101447Formin homology 2 domain (FH2 domain)coord: 86..96
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
NoneNo IPR availableTMHMMTMhelixcoord: 115..137

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13252contigL-elsbetiae_contig13252:271..3866 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13252.2529.1mRNA_L-elsbetiae_contig13252.2529.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig13252 271..3878 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig13252.2529.1 ID=prot_L-elsbetiae_contig13252.2529.1|Name=mRNA_L-elsbetiae_contig13252.2529.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=176bp
MVVVTLLFMFYLSWRLSLVAFISVPAIVTVSKLYGNYIRKLSKLSQDKLA
EAGSVAEESLGSMTTVRSFAAEGRESREYAGKLQDPPPPPPPPPPPDLRL
RTPLYYVLSKKGGYAYGFYAASFVLLPNLVTAVVLFYGGQLVMQGQVTGG
KVVSFMIYLTSLSDGFNDMASIFSSM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036640ABC1_TM_sf
IPR011527ABC1_TM_dom
IPR039421Type_I_exporter
IPR030254ABCB9