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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 2157 |
| Cds size | 2157 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815502.734763-CDS-L-elsbetiae_contig13247:791..1664 | 1622815502.734763-CDS-L-elsbetiae_contig13247:791..1664 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig13247 792..1664 - |
| 1691682929.6845632-CDS-L-elsbetiae_contig13247:791..1664 | 1691682929.6845632-CDS-L-elsbetiae_contig13247:791..1664 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig13247 792..1664 - |
| 1622815502.744826-CDS-L-elsbetiae_contig13247:2518..2955 | 1622815502.744826-CDS-L-elsbetiae_contig13247:2518..2955 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig13247 2519..2955 - |
| 1691682929.69634-CDS-L-elsbetiae_contig13247:2518..2955 | 1691682929.69634-CDS-L-elsbetiae_contig13247:2518..2955 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig13247 2519..2955 - |
| 1622815502.7541149-CDS-L-elsbetiae_contig13247:3322..4169 | 1622815502.7541149-CDS-L-elsbetiae_contig13247:3322..4169 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig13247 3323..4169 - |
| 1691682929.7101524-CDS-L-elsbetiae_contig13247:3322..4169 | 1691682929.7101524-CDS-L-elsbetiae_contig13247:3322..4169 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig13247 3323..4169 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig13247.2527.1 >prot_L-elsbetiae_contig13247.2527.1 ID=prot_L-elsbetiae_contig13247.2527.1|Name=mRNA_L-elsbetiae_contig13247.2527.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=719bp
GDEDLCPHAPPSSPRHPVQRTRYEGAHRKAAVPTCAVDEEHAEGGDAFAS
LATVTASGDQPTGCESKSTAGSSPKTGEFVAPREAHADAPEPRSCLVTTR
TALPSRPTSAPLCSSSCQEPSPKPSDSKEQTPPTPERAGTGRSVEDEGSP
KRGVDIYGRRLDRSFRVPEDENGPSAAEECYTIAADTASGDDQYTRVDRV
ARAEWRAEAAEAAARKAETASAAAASEARTAIDEAERLRAEGVELSRWRE
AVLNLRDVLEIAQREGKVGKEDDGEGRRPYQDDPVVRHAKWVSSPALKTL
LPRLHQNARDLLTDLAAARRPGAPAASATPHVAGVAGVAGVAGAEDQRQG
ECTRSASAREEPLGEISSSRDADDNGAEPAVSVDVATAPGRHLVGYEEAE
KQLASLRKECKTLRIVMHALRGKDEESQKRIFALEGEVLQASLAAVKQEA
LVSTLRRQLELKGLSDTTRQQPQLLTPRHTELMAEMSASTGLQDDALPKN
GLSQRPSRLRHEFPVEASTPSVSLSSPRRKETGTRPKPDYVSPGRSCCDC
TTSIATPAARSSVRNRRTRKVDTSGGGSSAVDNAKTFALEAEEDTRRHSD
GKPRTPTTDILRRLLYEKTPKSSTSCAAESGEKAGIIADEENSDRSGHTS
RRSRNGRRLFAEGSTVLRACPAASDDAAGVRRGPAALFSDPTCGASGVDA
TEACAGGCTDVLAAGEGGE back to topmRNA from alignment at L-elsbetiae_contig13247:792..4169- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig13247.2527.1 ID=mRNA_L-elsbetiae_contig13247.2527.1|Name=mRNA_L-elsbetiae_contig13247.2527.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3378bp|location=Sequence derived from alignment at L-elsbetiae_contig13247:792..4169- (Laminarionema elsbetiae ELsaHSoW15)
GGTGATGAGGACCTTTGCCCGCATGCGCCACCATCATCTCCACGCCACCC
TGTTCAGCGTACACGTTACGAAGGCGCCCACAGAAAAGCAGCAGTACCGA
CTTGTGCTGTGGACGAGGAACACGCGGAAGGCGGAGACGCTTTCGCCTCA
CTCGCGACCGTCACCGCCAGTGGTGATCAACCGACTGGTTGTGAGAGCAA
ATCCACCGCAGGATCAAGCCCTAAAACGGGAGAATTTGTGGCGCCGAGAG
AAGCGCATGCGGATGCCCCCGAGCCGCGTTCTTGTTTGGTCACAACGCGG
ACCGCGCTCCCTTCGAGGCCTACATCAGCCCCGTTGTGTTCGTCTTCATG
TCAAGAACCGTCTCCGAAACCATCTGATAGCAAAGAGCAGACGCCTCCTA
CACCAGAAAGAGCTGGCACAGGAAGGTCGGTAGAAGACGAAGGATCCCCG
AAGAGGGGAGTCGATATCTATGGTCGCCGTCTGGATCGATCCTTCCGAGT
GCCAGAAGATGAAAACGGTCCTTCGGCAGCCGAAGAATGCTACACCATCG
CTGCTGATACGGCAAGTGGTGACGATCAATACACGCGCGTTGATAGAGTT
GCTCGTGCAGAGTGGCGGGCGGAAGCTGCGGAGGCAGCCGCGCGAAAGGC
GGAAACGGCGTCAGCCGCCGCCGCAAGCGAAGCTAGGACAGCCATCGACG
AGGCTGAGCGGCTGCGAGCGGAAGGGGTTGAGCTTTCGAGATGGCGGGAA
GCCGTACTCAACCTTAGGGATGTGCTTGAAATTGCCCAGCGAGAGGGAAA
GGTGGGGAAAGAGGACGACGGAGAGGGACGAAGACCGTATCAAGACGGTG
GGTGTTTTCAATGGGAAGCGGCGACAAGACACTGTTCTATACTTCTATAT
ATATTGTCAAGATTTTAGTTTTTCCAGTTTATATCGAAGCCCGAAATATG
TTTGTTGATTTTAATTTCCTGGCGCTTTGCAACATTGAGTCGTTCTCGGG
AGACTTGATCTACGGCGGAGCAGACACACACGCGTGACGAATTGCACGGA
CGAACCCTGGCTACCCTCTCTTGCAAGCAAATGGGTCGGCTTGCGGCAAC
GCAACATGAACATATAAACATACTGTTCCAATGCCCACCTCGAACGAACT
CATCAACCTTGTTCGCCTCAACCACGCATTGTTTTGTTTGCTGCCGCTTT
CGCTATTGTAGCAGATCCCGTAGTACGGCATGCAAAATGGGTTTCTTCTC
CAGCCTTGAAGACTCTACTCCCGCGCCTTCATCAGAACGCACGCGACCTT
CTTACCGACCTCGCCGCGGCACGCAGACCTGGGGCACCAGCAGCTTCGGC
GACACCGCACGTTGCGGGCGTTGCGGGCGTTGCGGGCGTTGCGGGTGCTG
AAGACCAACGGCAAGGGGAGTGCACTCGGTCGGCATCAGCCAGGGAAGAA
CCTCTCGGCGAGATATCCAGCAGCAGGGATGCGGACGACAATGGAGCAGA
ACCAGCAGTGTCGGTGGACGTGGCAACGGCTCCAGGCAGGCACCTTGTGG
GGTATGAAGAGGCGGAGAAGCAGTTGGCTTCGCTACGGAAAGAGTGCAAG
ACGTTGCGGATTGTCATGCACGCATTGCGCGGGAAGGACGAAGAAAGTCA
GGTGAGCACACGAAAATTAGCCGTAACCCAGATGCCGGCAATGTTGTCTT
CGAAGTAGTACAGTATCAGCCCACCCTGTTGTTTACTCTCTGGCATGGCT
ATTTGACTTTCCCGCAAACCTGACAAGGGTTTCGCCTACCCAAGTCACAC
TACTGTAGTAATGGTGTCGCGCTTACCCAACTGTTTTCTTTGAACGAACC
TTCGCCTCTGAGTGTTTGAATTATTTTTATTTATATAAACAATGAATCAA
AGATGGAACCTAACCCACACTAGAGCAAAGACTGTGGAGGTCACCCTTAT
AAGGGATATAAACCTCCTACAGTCTGTCGAAGGCGTTTGACCCTTTTCAC
ATTTGACGTCGACGAAGAGATGCTAGTTTTCGGTGGACAAAGTCCCGAGT
TCGAATCTCACCATCATGATTTCTCTTTCAGGAATGTCAAAGTCAAACAA
CTTTTCTCTCCATGAATAAAATAAAAAGAAACAATATTATGGGAGATCGA
AACGAAAACGGTAGTCGAACTGCGGAACTTCTGAGACGTGGCGGACGTAG
CGCACCCGCTGAACACGAAGAAAACGTGTGGAAACACACGCTCAGAGGAT
ATGTGAAAAGTGGGATAAAAACGCTTTGCCGCCAGCCGGTCGGGTTCCGG
TTACCCTAAAAAGCCTTCTCTTGCCTAGCAACCAAGAAGAAGACTCAAAA
AGGGGGGGGGCAATGTGGAGGTCACCCTTATAAGGGATATAAACCTCCTA
CAGTCTGTCGAAGACGTTTGATCATTTTCACAGGACTCATGATAAATTTA
TTGCAGAGCTCTATCTGACGGCTTTGCCCGCTCCCGTTGTTTGGAATGCA
AACAGAAACGAATCTTCGCCCTAGAGGGAGAAGTGCTTCAGGCATCCCTT
GCTGCTGTAAAGCAAGAGGCGCTTGTCTCAACTCTGCGCAGACAGCTCGA
GTTGAAAGGGTTGAGCGACACAACACGTCAGCAGCCACAGCTCTTGACGC
CTCGGCATACGGAATTGATGGCCGAAATGTCGGCTTCTACAGGACTACAA
GATGACGCCCTACCAAAAAATGGGCTCTCCCAGCGGCCGAGTCGTCTCCG
ACATGAATTTCCGGTGGAGGCATCAACACCATCGGTGTCGCTTTCTTCGC
CACGTCGGAAAGAAACGGGAACCAGGCCGAAGCCTGATTATGTGAGCCCC
GGCCGGTCGTGCTGCGATTGCACGACCTCAATTGCAACACCAGCAGCTCG
AAGCAGCGTGCGTAATCGGCGCACACGTAAAGTCGATACCAGTGGCGGCG
GCAGCAGCGCAGTCGACAACGCGAAAACATTTGCGTTAGAGGCAGAGGAG
GATACGCGGCGTCACTCTGATGGTAAACCCCGCACGCCGACGACGGATAT
CCTGCGGCGCCTGCTCTACGAGAAAACCCCGAAGTCGTCAACTTCGTGCG
CCGCAGAGTCTGGTGAGAAGGCTGGAATAATTGCTGACGAGGAAAACTCT
GACCGCTCTGGCCATACGTCGCGAAGAAGCCGCAACGGTCGGCGCTTGTT
TGCCGAGGGTTCGACCGTGCTTCGCGCTTGTCCAGCGGCTTCGGACGATG
CCGCGGGTGTTCGGCGAGGGCCGGCGGCTCTCTTCTCCGATCCAACATGC
GGGGCGAGTGGAGTGGACGCTACGGAGGCATGTGCAGGGGGGTGTACCGA
TGTCTTGGCCGCGGGAGAGGGAGGCGAG back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig13247:792..4169- >mRNA_L-elsbetiae_contig13247.2527.1 ID=mRNA_L-elsbetiae_contig13247.2527.1|Name=mRNA_L-elsbetiae_contig13247.2527.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4314bp|location=Sequence derived from alignment at L-elsbetiae_contig13247:792..4169- (Laminarionema elsbetiae ELsaHSoW15)
GGTGATGAGGACCTTTGCCCGCATGCGCCACCATCATCTCCACGCCACCC
TGTTCAGCGTACACGTTACGAAGGCGCCCACAGAAAAGCAGCAGTACCGA
CTTGTGCTGTGGACGAGGAACACGCGGAAGGCGGAGACGCTTTCGCCTCA
CTCGCGACCGTCACCGCCAGTGGTGATCAACCGACTGGTTGTGAGAGCAA
ATCCACCGCAGGATCAAGCCCTAAAACGGGAGAATTTGTGGCGCCGAGAG
AAGCGCATGCGGATGCCCCCGAGCCGCGTTCTTGTTTGGTCACAACGCGG
ACCGCGCTCCCTTCGAGGCCTACATCAGCCCCGTTGTGTTCGTCTTCATG
TCAAGAACCGTCTCCGAAACCATCTGATAGCAAAGAGCAGACGCCTCCTA
CACCAGAAAGAGCTGGCACAGGAAGGTCGGTAGAAGACGAAGGATCCCCG
AAGAGGGGAGTCGATATCTATGGTCGCCGTCTGGATCGATCCTTCCGAGT
GCCAGAAGATGAAAACGGTCCTTCGGCAGCCGAAGAATGCTACACCATCG
CTGCTGATACGGCAAGTGGTGACGATCAATACACGCGCGTTGATAGAGTT
GCTCGTGCAGAGTGGCGGGCGGAAGCTGCGGAGGCAGCCGCGCGAAAGGC
GGAAACGGCGTCAGCCGCCGCCGCAAGCGAAGCTAGGACAGCCATCGACG
AGGCTGAGCGGCTGCGAGCGGAAGGGGTTGAGCTTTCGAGATGGCGGGAA
GCCGTACTCAACCTTAGGGATGTGCTTGAAATTGCCCAGCGAGAGGGAAA
GGTGGGGAAAGAGGACGACGGAGAGGGACGAAGACCGTATCAAGACGGGT
GATGAGGACCTTTGCCCGCATGCGCCACCATCATCTCCACGCCACCCTGT
TCAGCGTACACGTTACGAAGGCGCCCACAGAAAAGCAGCAGTACCGACTT
GTGCTGTGGACGAGGAACACGCGGAAGGCGGAGACGCTTTCGCCTCACTC
GCGACCGTCACCGCCAGTGGTGATCAACCGACTGGTTGTGAGAGCAAATC
CACCGCAGGATCAAGCCCTAAAACGGGAGAATTTGTGGCGCCGAGAGAAG
CGCATGCGGATGCCCCCGAGCCGCGTTCTTGTTTGGTCACAACGCGGACC
GCGCTCCCTTCGAGGCCTACATCAGCCCCGTTGTGTTCGTCTTCATGTCA
AGAACCGTCTCCGAAACCATCTGATAGCAAAGAGCAGACGCCTCCTACAC
CAGAAAGAGCTGGCACAGGAAGGTCGGTAGAAGACGAAGGATCCCCGAAG
AGGGGAGTCGATATCTATGGTCGCCGTCTGGATCGATCCTTCCGAGTGCC
AGAAGATGAAAACGGTCCTTCGGCAGCCGAAGAATGCTACACCATCGCTG
CTGATACGGCAAGTGGTGACGATCAATACACGCGCGTTGATAGAGTTGCT
CGTGCAGAGTGGCGGGCGGAAGCTGCGGAGGCAGCCGCGCGAAAGGCGGA
AACGGCGTCAGCCGCCGCCGCAAGCGAAGCTAGGACAGCCATCGACGAGG
CTGAGCGGCTGCGAGCGGAAGGGGTTGAGCTTTCGAGATGGCGGGAAGCC
GTACTCAACCTTAGGGATGTGCTTGAAATTGCCCAGCGAGAGGGAAAGGT
GGGGAAAGAGGACGACGGAGAGGGACGAAGACCGTATCAAGACGATCCCG
TAGTACGGCATGCAAAATGGGTTTCTTCTCCAGCCTTGAAGACTCTACTC
CCGCGCCTTCATCAGAACGCACGCGACCTTCTTACCGACCTCGCCGCGGC
ACGCAGACCTGGGGCACCAGCAGCTTCGGCGACACCGCACGTTGCGGGCG
TTGCGGGCGTTGCGGGCGTTGCGGGTGCTGAAGACCAACGGCAAGGGGAG
TGCACTCGGTCGGCATCAGCCAGGGAAGAACCTCTCGGCGAGATATCCAG
CAGCAGGGATGCGGACGACAATGGAGCAGAACCAGCAGTGTCGGTGGACG
TGGCAACGGCTCCAGGCAGGCACCTTGTGGGGTATGAAGAGGCGGAGAAG
CAGTTGGCTTCGCTACGGAAAGAGTGCAAGACGTTGCGGATTGTCATGCA
CGCATTGCGCGGGAAGGACGAAGAAAGTCAGATCCCGTAGTACGGCATGC
AAAATGGGTTTCTTCTCCAGCCTTGAAGACTCTACTCCCGCGCCTTCATC
AGAACGCACGCGACCTTCTTACCGACCTCGCCGCGGCACGCAGACCTGGG
GCACCAGCAGCTTCGGCGACACCGCACGTTGCGGGCGTTGCGGGCGTTGC
GGGCGTTGCGGGTGCTGAAGACCAACGGCAAGGGGAGTGCACTCGGTCGG
CATCAGCCAGGGAAGAACCTCTCGGCGAGATATCCAGCAGCAGGGATGCG
GACGACAATGGAGCAGAACCAGCAGTGTCGGTGGACGTGGCAACGGCTCC
AGGCAGGCACCTTGTGGGGTATGAAGAGGCGGAGAAGCAGTTGGCTTCGC
TACGGAAAGAGTGCAAGACGTTGCGGATTGTCATGCACGCATTGCGCGGG
AAGGACGAAGAAAGTCAGAAACGAATCTTCGCCCTAGAGGGAGAAGTGCT
TCAGGCATCCCTTGCTGCTGTAAAGCAAGAGGCGCTTGTCTCAACTCTGC
GCAGACAGCTCGAGTTGAAAGGGTTGAGCGACACAACACGTCAGCAGCCA
CAGCTCTTGACGCCTCGGCATACGGAATTGATGGCCGAAATGTCGGCTTC
TACAGGACTACAAGATGACGCCCTACCAAAAAATGGGCTCTCCCAGCGGC
CGAGTCGTCTCCGACATGAATTTCCGGTGGAGGCATCAACACCATCGGTG
TCGCTTTCTTCGCCACGTCGGAAAGAAACGGGAACCAGGCCGAAGCCTGA
TTATGTGAGCCCCGGCCGGTCGTGCTGCGATTGCACGACCTCAATTGCAA
CACCAGCAGCTCGAAGCAGCGTGCGTAATCGGCGCACACGTAAAGTCGAT
ACCAGTGGCGGCGGCAGCAGCGCAGTCGACAACGCGAAAACATTTGCGTT
AGAGGCAGAGGAGGATACGCGGCGTCACTCTGATGGTAAACCCCGCACGC
CGACGACGGATATCCTGCGGCGCCTGCTCTACGAGAAAACCCCGAAGTCG
TCAACTTCGTGCGCCGCAGAGTCTGGTGAGAAGGCTGGAATAATTGCTGA
CGAGGAAAACTCTGACCGCTCTGGCCATACGTCGCGAAGAAGCCGCAACG
GTCGGCGCTTGTTTGCCGAGGGTTCGACCGTGCTTCGCGCTTGTCCAGCG
GCTTCGGACGATGCCGCGGGTGTTCGGCGAGGGCCGGCGGCTCTCTTCTC
CGATCCAACATGCGGGGCGAGTGGAGTGGACGCTACGGAGGCATGTGCAG
GGGGGTGTACCGATGTCTTGGCCGCGGGAGAGGGAGGCGAGAAACGAATC
TTCGCCCTAGAGGGAGAAGTGCTTCAGGCATCCCTTGCTGCTGTAAAGCA
AGAGGCGCTTGTCTCAACTCTGCGCAGACAGCTCGAGTTGAAAGGGTTGA
GCGACACAACACGTCAGCAGCCACAGCTCTTGACGCCTCGGCATACGGAA
TTGATGGCCGAAATGTCGGCTTCTACAGGACTACAAGATGACGCCCTACC
AAAAAATGGGCTCTCCCAGCGGCCGAGTCGTCTCCGACATGAATTTCCGG
TGGAGGCATCAACACCATCGGTGTCGCTTTCTTCGCCACGTCGGAAAGAA
ACGGGAACCAGGCCGAAGCCTGATTATGTGAGCCCCGGCCGGTCGTGCTG
CGATTGCACGACCTCAATTGCAACACCAGCAGCTCGAAGCAGCGTGCGTA
ATCGGCGCACACGTAAAGTCGATACCAGTGGCGGCGGCAGCAGCGCAGTC
GACAACGCGAAAACATTTGCGTTAGAGGCAGAGGAGGATACGCGGCGTCA
CTCTGATGGTAAACCCCGCACGCCGACGACGGATATCCTGCGGCGCCTGC
TCTACGAGAAAACCCCGAAGTCGTCAACTTCGTGCGCCGCAGAGTCTGGT
GAGAAGGCTGGAATAATTGCTGACGAGGAAAACTCTGACCGCTCTGGCCA
TACGTCGCGAAGAAGCCGCAACGGTCGGCGCTTGTTTGCCGAGGGTTCGA
CCGTGCTTCGCGCTTGTCCAGCGGCTTCGGACGATGCCGCGGGTGTTCGG
CGAGGGCCGGCGGCTCTCTTCTCCGATCCAACATGCGGGGCGAGTGGAGT
GGACGCTACGGAGGCATGTGCAGGGGGGTGTACCGATGTCTTGGCCGCGG
GAGAGGGAGGCGAG back to top
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