mRNA_L-elsbetiae_contig10204.252.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10204.252.1 vs. uniprot
Match: D7FQG4_ECTSI (Cilia- and flagella-associated protein 52 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQG4_ECTSI) HSP 1 Score: 398 bits (1022), Expect = 3.730e-133 Identity = 189/201 (94.03%), Postives = 195/201 (97.01%), Query Frame = 1 Query: 1 MAAVGSDVTELKLHSCIGFTGKVLGGMKLTPCGGYMVYPLGSILVVRGMTGKNKQAFLEGHTSEISCVAMSSDGTRIVSGQANHMGVKADLCVWDLVQAQANCDADRPSGTGVLLHRLKQHLGHVRSLDFSFDGRYFASLGGQDDNSVVIWETDTGRAVCGSPAAQDSALSVKWLHRRNDRFVTAGNFHLRVWQVDVSIPK 603 MA VGSD TELKLHSCIGFTGKVLGGMKLTPCGGYMVYPLGSILVVR MTGKNKQAFLEGHTSEISCVAMSSDGTRIVSGQANHMGVKADLCVWDL+QAQANCDA++PSG GVLLHRLKQHLGHVR++DFSFDG+YFASLGGQDDNSVVIWE TGRAVCGSPAAQDSALSVKWLHRRNDRFVTAGNFHLRVWQVDVSIPK Sbjct: 1 MAGVGSDATELKLHSCIGFTGKVLGGMKLTPCGGYMVYPLGSILVVRSMTGKNKQAFLEGHTSEISCVAMSSDGTRIVSGQANHMGVKADLCVWDLIQAQANCDAEKPSGAGVLLHRLKQHLGHVRAVDFSFDGKYFASLGGQDDNSVVIWEAKTGRAVCGSPAAQDSALSVKWLHRRNDRFVTAGNFHLRVWQVDVSIPK 201
BLAST of mRNA_L-elsbetiae_contig10204.252.1 vs. uniprot
Match: A0A835Z6M8_9STRA (Cilia- and flagella-associated protein 52 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6M8_9STRA) HSP 1 Score: 291 bits (746), Expect = 2.550e-92 Identity = 131/199 (65.83%), Postives = 163/199 (81.91%), Query Frame = 1 Query: 7 AVGSDVTELKLHSCIGFTGKVLGGMKLTPCGGYMVYPLGSILVVRGMTGKNKQAFLEGHTSEISCVAMSSDGTRIVSGQANHMGVKADLCVWDLVQAQANCDADRPSGTGVLLHRLKQHLGHVRSLDFSFDGRYFASLGGQDDNSVVIWETDTGRAVCGSPAAQDSALSVKWLHRRNDRFVTAGNFHLRVWQVDVSIPK 603 A+ D EL L +CIGF+G VLGG+K+TPCG Y VYPLG +++VR +TG K AFLEGHT++I CVAMS DG R+ +GQ NH GVKAD+C+WD+ +A NCD+ P G GVLL R +QHLG V+ LDFS DGRY A+LGGQDDN++V+W+ DTGRA+CG+PAAQDSAL++KWL+RRNDR VTAGN++LRVWQVDV IPK Sbjct: 2 ALAEDAPELNLEACIGFSGHVLGGLKVTPCGNYTVYPLGKMMIVRSLTG-GKTAFLEGHTNDICCVAMSPDGKRLATGQVNHPGVKADVCIWDMSRAVRNCDSHDPHGAGVLLSRFRQHLGKVQCLDFSCDGRYLATLGGQDDNTLVVWDIDTGRAICGAPAAQDSALAIKWLNRRNDRLVTAGNYNLRVWQVDVRIPK 199
BLAST of mRNA_L-elsbetiae_contig10204.252.1 vs. uniprot
Match: A0A6V1NYK3_HETAK (Cilia- and flagella-associated protein 52 n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NYK3_HETAK) HSP 1 Score: 250 bits (639), Expect = 2.310e-76 Identity = 113/199 (56.78%), Postives = 155/199 (77.89%), Query Frame = 1 Query: 7 AVGSDVTELKLHSCIGFTGKVLGGMKLTPCGGYMVYPLGSILVVRGMTGKNKQAFLEGHTSEISCVAMSSDGTRIVSGQANHMGVKADLCVWDLVQAQANCDADRPSGTGVLLHRLKQHLGHVRSLDFSFDGRYFASLGGQDDNSVVIWETDTGRAVCGSPAAQDSALSVKWLHRRNDRFVTAGNFHLRVWQVDVSIPK 603 A+ + TEL+L+S IGF+G+V G+K PCG Y+VYPLGSI+V+R + +NKQ+FLEGHT ++C+A+S DGTR+ SGQ +H GVKAD+ VWDL +A+ NC PS G ++HRL QHLG V+++DFS D ++ +LGG+DDN++V+WE TGR +CG+PA D+AL +WL R+DR VTAGN+HLRVWQVDV++PK Sbjct: 2 AIAENATELQLNSVIGFSGEVPDGLKYLPCGEYIVYPLGSIIVLRHLQ-ENKQSFLEGHTQGVTCLAVSHDGTRLASGQTHHSGVKADVIVWDLEKAKENCRNGTPSAGGEVVHRLFQHLGKVQAVDFSCDDQFLLTLGGRDDNALVVWEAATGRPICGAPAGADAALCARWLRNRSDRLVTAGNYHLRVWQVDVALPK 199
BLAST of mRNA_L-elsbetiae_contig10204.252.1 vs. uniprot
Match: A0A7S3H4V8_9STRA (Cilia- and flagella-associated protein 52 (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H4V8_9STRA) HSP 1 Score: 231 bits (590), Expect = 1.210e-69 Identity = 107/193 (55.44%), Postives = 144/193 (74.61%), Query Frame = 1 Query: 28 ELKLHSCIGFTGKVLGGMKLTPCGGYMVYPLGSILVVRGMTGKNKQAFLEGHTSEISCVAMSSDGTRIVSGQANHMGVKADLCVWDLVQAQANCDADRPS-GTGVLLHRLKQHLGHVRSLDFSFDGRYFASLGGQDDNSVVIWETDTGRAVCGSPAAQDSALSVKWLHRRNDRFVTAGNFHLRVWQVDVSIPK 603 ELK+ S IGF GKV + TPCG Y+VYPLGS +V++ M + K+AF +GHTSEISCV +S+DG R+ SGQ N MGVKAD+ +WDL QA+ D+ G ++RLKQHLG V+ + FS + Y A++GGQDDN++V+W+ ++G A+CG+PAA DSA+ KWL+ RNDR VTAGN+H+RVWQ+D S+PK Sbjct: 4 ELKIKSVIGFNGKVNNALVYTPCGKYIVYPLGSFVVLKNMVTE-KEAFFDGHTSEISCVTVSADGNRLASGQINLMGVKADVIIWDLAQAKKLLDSGVVMVGDSTCIYRLKQHLGRVQDVSFSPNNAYLATIGGQDDNTIVVWDAESGTAICGAPAASDSAICCKWLNGRNDRLVTAGNYHIRVWQIDFSLPK 195
BLAST of mRNA_L-elsbetiae_contig10204.252.1 vs. uniprot
Match: F0Y0S5_AURAN (Cilia- and flagella-associated protein 52 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y0S5_AURAN) HSP 1 Score: 193 bits (490), Expect = 1.590e-54 Identity = 95/207 (45.89%), Postives = 137/207 (66.18%), Query Frame = 1 Query: 7 AVGSDVTELKLHSCIGFTGKVLGGMK------LTPCGGYMVYPLGSILVVR--GMTGKNKQAFLEGHTSEISCVAMSSDGTRIVSGQANHMGVKADLCVWDLVQAQANCDADRPSGTGVLLHRLKQHLGHVRSLDFSFDGRYFASLGGQDDNSVVIWETDTGRAVCGSPAAQDSALSVKWLHRRNDRFVTAGNFHLRVWQVDVSIPK 603 A+ D ++LKL IGF+G V G+ L +++YPLGS++VVR G + AFL+GH++++SC+ +S DG R+ SGQ +H GV AD+ VWDLV+A A + VLLHRL+QH G V+++ + A+LGG+DDN++VIW+ ++G +CG PAA D+AL+++WLH DR +T G HLRVWQVDVS+PK Sbjct: 2 ALAEDSSQLKLDGIIGFSGSVQDGVHVVRSEHLPGSREWIIYPLGSLVVVRQTGTGSRAVVAFLQGHSNDVSCLCVSGDGRRLASGQDSHQGVAADVIVWDLVEACEGALAGESASEKVLLHRLRQHKGSVQAVGINSTDSLLATLGGRDDNALVIWDLESGEPICGQPAAADNALALQWLHGNPDRLITCGARHLRVWQVDVSLPK 208
BLAST of mRNA_L-elsbetiae_contig10204.252.1 vs. uniprot
Match: K0S6T1_THAOC (Cilia- and flagella-associated protein 52 n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S6T1_THAOC) HSP 1 Score: 190 bits (482), Expect = 1.980e-53 Identity = 95/199 (47.74%), Postives = 126/199 (63.32%), Query Frame = 1 Query: 10 VGSDVTELKLHSCIGFTGKVLGGMKLTPCGGYMVYPLGSILVVRGMTGKNKQAFLE-GHTSEISCVAMSSDGTRIVSGQANHMGVKADLCVWDLVQAQANCDADRPSGTGVLLHRLKQHLGHVRSLDFSFDGRYFASLGGQDDNSVVIWETDTGRAVCGSPAAQDSALSVKWLHRRNDRFVTAGNFHLRVWQVDVSIPK 603 +GS L L S IGFTG + GG+ PCG ++V+PLGS+ V++ ++ K KQ FL+ G +SCVA+S DG + G KA++ VWDL + + +LH L QH V S+DFS DGR+ A+LGG DDN +V+W+ +TG AVCGSPAA D++ VKWLH RNDRFVT G H+RVWQV V P+ Sbjct: 1 MGSPPPNLALKSAIGFTGSICGGLHYLPCGKFVVFPLGSVAVLKSLSTK-KQYFLDAGVDKNVSCVAISGDGRYLACGHETTASFKAEVLVWDLNRVLRAYAKNEELSKDCVLHTLFQHYKRVESVDFSCDGRHLATLGGLDDNDLVVWDCETGVAVCGSPAATDASHCVKWLHDRNDRFVTCGQLHVRVWQVCVKTPR 198
BLAST of mRNA_L-elsbetiae_contig10204.252.1 vs. uniprot
Match: A0A482SVC4_9ARCH (Cilia- and flagella-associated protein 52 n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SVC4_9ARCH) HSP 1 Score: 186 bits (471), Expect = 4.620e-52 Identity = 85/163 (52.15%), Postives = 121/163 (74.23%), Query Frame = 1 Query: 118 LGSILVVRGMTGKNKQAFLEGHTSEISCVAMSSDGTRIVSGQANHMGVKADLCVWDLVQAQANCDADRPS-GTGVLLHRLKQHLGHVRSLDFSFDGRYFASLGGQDDNSVVIWETDTGRAVCGSPAAQDSALSVKWLHRRNDRFVTAGNFHLRVWQVDVSIPK 603 +GS +V++ + +++AFL+GH+ +++CV MS++G R+ SGQ + GVKAD+ +WDL A+ D+ G LLHRLKQHLG V+ + FS + A++GGQDDN++VIW DTG A+CGSPAA DSA+ VKWL+ R+DR VTAGN+H+RVWQ+D S+PK Sbjct: 1 MGSFIVIKNLL-TDREAFLDGHSQDVTCVGMSNNGNRLASGQMHFTGVKADVIIWDLEAAKQLLDSGVIMLGERCLLHRLKQHLGKVQDVAFSNHDEFLATIGGQDDNALVIWNADTGEAICGSPAAMDSAICVKWLNNRHDRVVTAGNYHVRVWQIDFSLPK 162
BLAST of mRNA_L-elsbetiae_contig10204.252.1 vs. uniprot
Match: F0YDJ7_AURAN (Cilia- and flagella-associated protein 52 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDJ7_AURAN) HSP 1 Score: 183 bits (465), Expect = 4.590e-51 Identity = 94/201 (46.77%), Postives = 129/201 (64.18%), Query Frame = 1 Query: 19 DVTELKLHSCIGFTGKVLGGMKLTPCGG--YMVYPLGSILVVRGMTGKNKQAFLEGHTSEISCVAMSSDGTRIVSGQANHMGVKADLCVWDLVQAQANCDADRPSGTGV----LLHRLKQHLGHVRSLDFSFDGRYFASLGGQDDNSVVIWETDTGRAVCGSPAAQDSALSVKWLHRRNDRFVTAGNFHLRVWQVDVSIPK 603 D+ L SC+GF+G VLGG+ G ++ +PLG+++VV+ T K AFL+GH+ +SCVA+S D + SGQ N +GV+A + +WDL +A C+ G G +H L+QHL V++L FS D R A++GG+DDNS+VIW+T TG A+CG PAA D+ L V WL R R VTAG +H+RVW VD S PK Sbjct: 6 DIAALHPSSCLGFSGGVLGGLHAVSYRGEPFITFPLGAMVVVKHATRKEGVAFLQGHSRSVSCVAVSHDCRMLASGQTNQLGVEAPVMLWDLEEA---CERVLQGGAGHGSLGPVHVLRQHLAGVQALSFSCDDRSLATIGGRDDNSLVIWDTRTGNAICGVPAAPDTVLCVSWLKRNPHRLVTAGKYHVRVWHVDPSGPK 203
BLAST of mRNA_L-elsbetiae_contig10204.252.1 vs. uniprot
Match: A0A7S1U044_9STRA (Cilia- and flagella-associated protein 52 n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U044_9STRA) HSP 1 Score: 183 bits (464), Expect = 4.950e-51 Identity = 82/138 (59.42%), Postives = 106/138 (76.81%), Query Frame = 1 Query: 190 EISCVAMSSDGTRIVSGQANHMGVKADLCVWDLVQAQANCDADRPSGTGVLLHRLKQHLGHVRSLDFSFDGRYFASLGGQDDNSVVIWETDTGRAVCGSPAAQDSALSVKWLHRRNDRFVTAGNFHLRVWQVDVSIPK 603 ++S +A+S DGT I +GQ H+GVKAD+ VWDL +A+A CDA S +L+ L+QH G + S+DFS D RY AS+GGQDDNS+V+W+ ++GR +CGSPAA D AL +KWLH RNDR VTAG+FHLRVWQ+D S PK Sbjct: 39 DVSTLAVSRDGTMIATGQKQHLGVKADIIVWDLTEAKARCDAGE-SVCDAVLYTLRQHSGGIMSVDFSCDSRYLASVGGQDDNSLVVWDLESGRPICGSPAATDQALCLKWLHGRNDRLVTAGHFHLRVWQIDASFPK 175
BLAST of mRNA_L-elsbetiae_contig10204.252.1 vs. uniprot
Match: A0A7R9VFB0_9CHLO (Cilia- and flagella-associated protein 52 n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9VFB0_9CHLO) HSP 1 Score: 178 bits (452), Expect = 3.210e-49 Identity = 84/188 (44.68%), Postives = 123/188 (65.43%), Query Frame = 1 Query: 31 LKLHSCIGFTGKVLGGMKLTPCGGYMVYPLGSILVVRGMTGKNKQAFLEGHTSEISCVAMSSDGTRIVSGQANHMGVKADLCVWDLVQAQANCDADRPSGTGVLLHRLKQHLGHVRSLDFSFDGRYFASLGGQDDNSVVIWETDTGRAVCGSPAAQDSALSVKWLHRRNDRFVTAGNFHLRVWQVDVS 594 L L+S +GF G + G+ + P G ++YPLGS +V+R Q FL+GH+ ++SC+A+S G + SGQ +MG AD+ +WDL Q L+HR+ H +++LDFS D RY ASLGGQDDN++V+W+ +TGRA+CGSPA + +L+VK+ + NDR VT GN++LRVW+ D+S Sbjct: 5 LGLNSVVGFGGGIENGLVVHPDGRTLIYPLGSTIVLRDKNDPRAQEFLQGHSDKVSCLALSKSGRYLASGQITYMGFTADIIIWDLETRQ-------------LMHRMALHKVKIQALDFSCDERYLASLGGQDDNALVLWDVETGRAICGSPAHTNFSLTVKFFNNANDRLVTGGNYNLRVWEYDLS 179 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10204.252.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10204.252.1 >prot_L-elsbetiae_contig10204.252.1 ID=prot_L-elsbetiae_contig10204.252.1|Name=mRNA_L-elsbetiae_contig10204.252.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=202bp MAAVGSDVTELKLHSCIGFTGKVLGGMKLTPCGGYMVYPLGSILVVRGMTback to top mRNA from alignment at L-elsbetiae_contig10204:3408..6138- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10204.252.1 ID=mRNA_L-elsbetiae_contig10204.252.1|Name=mRNA_L-elsbetiae_contig10204.252.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2731bp|location=Sequence derived from alignment at L-elsbetiae_contig10204:3408..6138- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10204:3408..6138- >mRNA_L-elsbetiae_contig10204.252.1 ID=mRNA_L-elsbetiae_contig10204.252.1|Name=mRNA_L-elsbetiae_contig10204.252.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1212bp|location=Sequence derived from alignment at L-elsbetiae_contig10204:3408..6138- (Laminarionema elsbetiae ELsaHSoW15)back to top |