prot_L-elsbetiae_contig13233.2517.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig13233.2517.1
Unique Name	prot_L-elsbetiae_contig13233.2517.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	145

Homology

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BLAST of mRNA_L-elsbetiae_contig13233.2517.1 vs. uniprot
Match: A0A097IUM0_9PHAE (Malate dehydrogenase n=1 Tax=Punctaria latifolia TaxID=90013 RepID=A0A097IUM0_9PHAE)

HSP 1 Score: 249 bits (637), Expect = 1.730e-79
Identity = 134/150 (89.33%), Postives = 136/150 (90.67%), Query Frame = 0

Query:    1 MEVQDSLYSAGLDGLLATTDVAEAFDGAQVAILLGGFPRRPGMERGDLIDKNAGIMKRMGEALERHASRNCFVVVVANPAPTNCIVLAAHAPSIPRKNISCLSRLDHDRMAGMLLHEANRCLSGDG-----GXXXXXGRRRPLLGPADIR 145
            MEVQDSLYS  LDGLLATTD A AFDGAQVAILLGGFPRRPGMERGDLIDKNAGIMKRMGEALERHA+RNC VVVVANPAPTNCIVLA+HAPSIPRKNISCLSRLDHDRMAGMLLHEANRCLSG       GXXXXX  RRPLLGPADIR
Sbjct:   54 MEVQDSLYSTVLDGLLATTDEARAFDGAQVAILLGGFPRRPGMERGDLIDKNAGIMKRMGEALERHANRNCKVVVVANPAPTNCIVLASHAPSIPRKNISCLSRLDHDRMAGMLLHEANRCLSGTPHGPPTGXXXXXXXRRPLLGPADIR 203

[Close]

BLAST of mRNA_L-elsbetiae_contig13233.2517.1 vs. uniprot
Match: D7FQW1_ECTSI (Malate dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQW1_ECTSI)

HSP 1 Score: 230 bits (586), Expect = 1.180e-73
Identity = 117/147 (79.59%), Postives = 126/147 (85.71%), Query Frame = 0

Query:    1 MEVQDSLYSAGLDGLLATTDVAEAFDGAQVAILLGGFPRRPGMERGDLIDKNAGIMKRMGEALERHASRNCFVVVVANPAPTNCIVLAAHAPSIPRKNISCLSRLDHDRMAGMLLHEANRCLSGDG--GXXXXXGRRRPLLGPADIR 145
            MEVQDSL+S  LDG+LATTD A+AFDGAQVAILLGGFPRRPGMERGDLI+KNAGIMKRMG  LE+HASRNC VVVVANPAPTNCIVLA++APSIPRKNISCLSRLDHDRMAGMLLHEANRCL+     G     G     LGPAD+R
Sbjct:   58 MEVQDSLFSTALDGILATTDEAKAFDGAQVAILLGGFPRRPGMERGDLIEKNAGIMKRMGGCLEKHASRNCKVVVVANPAPTNCIVLASYAPSIPRKNISCLSRLDHDRMAGMLLHEANRCLAAAAANGNGSAKGGSWQRLGPADVR 204

[Close]

BLAST of mRNA_L-elsbetiae_contig13233.2517.1 vs. uniprot
Match: A0A6H5KVV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVV0_9PHAE)

HSP 1 Score: 226 bits (576), Expect = 3.400e-70
Identity = 115/147 (78.23%), Postives = 126/147 (85.71%), Query Frame = 0

Query:    1 MEVQDSLYSAGLDGLLATTDVAEAFDGAQVAILLGGFPRRPGMERGDLIDKNAGIMKRMGEALERHASRNCFVVVVANPAPTNCIVLAAHAPSIPRKNISCLSRLDHDRMAGMLLHEANRCLSGDG--GXXXXXGRRRPLLGPADIR 145
            MEVQDSL+S  LDG+LATTD A+AFDGAQVAILLGGFPRRPGMERGDLI+KNAGIMKRMG  LE++ASRNC VVVVANPAPTNC+VLA++APSIPRKNISCLSRLDHDRMAGMLLHEANRCL+     G     G     LGPAD+R
Sbjct:   58 MEVQDSLFSTALDGVLATTDEAKAFDGAQVAILLGGFPRRPGMERGDLIEKNAGIMKRMGCCLEKYASRNCKVVVVANPAPTNCVVLASYAPSIPRKNISCLSRLDHDRMAGMLLHEANRCLAAAAANGNGSAKGGSWQRLGPADVR 204

[Close]

BLAST of mRNA_L-elsbetiae_contig13233.2517.1 vs. uniprot
Match: A0A097IUP1_9PHAE (Malate dehydrogenase n=1 Tax=Colpomenia sinuosa TaxID=87236 RepID=A0A097IUP1_9PHAE)

HSP 1 Score: 223 bits (569), Expect = 2.720e-69
Identity = 115/154 (74.68%), Postives = 126/154 (81.82%), Query Frame = 0

Query:    1 MEVQDSLYSAGLDGLLATTDVAEAFDGAQVAILLGGFPRRPGMERGDLIDKNAGIMKRMGEALERHASRNCFVVVVANPAPTNCIVLAAHAPSIPRKNISCLSRLDHDRMAGMLLHEANRCLS---------GDGGXXXXXGRRRPLLGPADIR 145
            MEVQDSL+ + LDG++ATTD A+AF+GAQVAILLGGFPRRPGMERGDLI KNAGIMKRMGE LE++ASR+C V+VVANPAPTNC VLA+HAPSIPRKNISCLSRLDHDRM GMLLHEANRCLS           GG     G  R  LGPADIR
Sbjct:   57 MEVQDSLFLSVLDGIIATTDEAKAFEGAQVAILLGGFPRRPGMERGDLIGKNAGIMKRMGEDLEKYASRDCKVLVVANPAPTNCCVLASHAPSIPRKNISCLSRLDHDRMVGMLLHEANRCLSVATGSNGNGSHGGISNGGGSARRRLGPADIR 210

[Close]

BLAST of mRNA_L-elsbetiae_contig13233.2517.1 vs. uniprot
Match: A0A097IUL1_9PHAE (Malate dehydrogenase n=1 Tax=Scytosiphon dotyi TaxID=180438 RepID=A0A097IUL1_9PHAE)

HSP 1 Score: 220 bits (561), Expect = 7.230e-68
Identity = 122/159 (76.73%), Postives = 131/159 (82.39%), Query Frame = 0

Query:    1 MEVQDSLYSAGLDGLLATTDVAEAFDGAQVAILLGGFPRRPGMERGDLIDKNAGIMKRMGEALERHASRNCFVVVVANPAPTNCIVLAAHAPSIPRKNISCLSRLDHDRMAGMLLHEANRCLS--------------GDGGXXXXXGRRRPLLGPADIR 145
            ME+QDSL+   LDG++ATTD A+AF+GAQVAILLGGFPRRPGMERGDLI KNAGIMKRMGEALER+ASRNC VVVVANPAPTNCIVLA+HAPSIPRKNISCLSRLDHDRM GMLLHEANRCL+               DG XXXXX RR   LG ADIR
Sbjct:   57 MEIQDSLFLTVLDGVIATTDEAKAFEGAQVAILLGGFPRRPGMERGDLIGKNAGIMKRMGEALERYASRNCKVVVVANPAPTNCIVLASHAPSIPRKNISCLSRLDHDRMVGMLLHEANRCLAEASGSVGNGTLGGVSDGXXXXXXXRR---LGQADIR 212

[Close]

BLAST of mRNA_L-elsbetiae_contig13233.2517.1 vs. uniprot
Match: A0A097IUP6_SACJA (Malate dehydrogenase n=2 Tax=Saccharina TaxID=309357 RepID=A0A097IUP6_SACJA)

HSP 1 Score: 218 bits (556), Expect = 1.690e-67
Identity = 114/149 (76.51%), Postives = 124/149 (83.22%), Query Frame = 0

Query:    1 MEVQDSLYSAGLDGLLATTDVAEAFDGAQVAILLGGFPRRPGMERGDLIDKNAGIMKRMGEALERHASRNCFVVVVANPAPTNCIVLAAHAPSIPRKNISCLSRLDHDRMAGMLLHEANRCLSGD----GGXXXXXGRRRPLLGPADIR 145
            MEVQDSL+S  LDG+LATTD A+AFDGAQVAILLGGFPRRPGMERGDLI KNA IMKRMGEALER+A  NC VVVVANPAPTNC+VL++HAPS+ R+NISCLSRLDHDRM GMLLHEANR LS      GG     G RR  LGPAD+R
Sbjct:   54 MEVQDSLFSTVLDGVLATTDEAQAFDGAQVAILLGGFPRRPGMERGDLIGKNASIMKRMGEALERYACHNCKVVVVANPAPTNCLVLSSHAPSLSRRNISCLSRLDHDRMVGMLLHEANRSLSAPVSAGGGDAGARGWRR--LGPADVR 200

[Close]

BLAST of mRNA_L-elsbetiae_contig13233.2517.1 vs. uniprot
Match: A0A097IUJ7_SCYLO (Malate dehydrogenase n=1 Tax=Scytosiphon lomentaria TaxID=27967 RepID=A0A097IUJ7_SCYLO)

HSP 1 Score: 218 bits (554), Expect = 6.960e-67
Identity = 113/154 (73.38%), Postives = 122/154 (79.22%), Query Frame = 0

Query:    1 MEVQDSLYSAGLDGLLATTDVAEAFDGAQVAILLGGFPRRPGMERGDLIDKNAGIMKRMGEALERHASRNCFVVVVANPAPTNCIVLAAHAPSIPRKNISCLSRLDHDRMAGMLLHEANRCLSGDGGXXXXX---------GRRRPLLGPADIR 145
            ME+QDSL+   LDG++ATTD A+AF+GAQVAILLGGFPRRPGMERGDLI KNAGIMKRMGEALER+A RNC V+VVANPAPTNCIVLA+HAPSIPRKNISCLSRLDHDRM GMLLHEANRCL    G              G     LGP DIR
Sbjct:   57 MEIQDSLFLTVLDGVVATTDEAKAFEGAQVAILLGGFPRRPGMERGDLIGKNAGIMKRMGEALERYAGRNCKVLVVANPAPTNCIVLASHAPSIPRKNISCLSRLDHDRMVGMLLHEANRCLGEASGSVRNGTVDWVSNGGGGSCRRLGPTDIR 210

[Close]

BLAST of mRNA_L-elsbetiae_contig13233.2517.1 vs. uniprot
Match: A0A097IUM7_UNDPI (Malate dehydrogenase n=1 Tax=Undaria pinnatifida TaxID=74381 RepID=A0A097IUM7_UNDPI)

HSP 1 Score: 211 bits (536), Expect = 1.940e-64
Identity = 112/152 (73.68%), Postives = 125/152 (82.24%), Query Frame = 0

Query:    1 MEVQDSLYSAGLDGLLATTDVAEAFDGAQVAILLGGFPRRPGMERGDLIDKNAGIMKRMGEALERHASRNCFVVVVANPAPTNCIVLAAHAPSIPRKNISCLSRLDHDRMAGMLLHEANRCLS-------GDGGXXXXXGRRRPLLGPADIR 145
            ME+QDSL+S  LDG+LATTD  +AF+GA+VAILLGGFPRRPGMERGDLI KNAGIMK+MG+ALER+A   C VVVVANPAPTNC+VL++HAPSIPRKNI+CLSRLDHDRM GMLL EANR LS       G   XXXX G R   LGPADIR
Sbjct:   54 MEIQDSLFSTVLDGVLATTDEGKAFEGAEVAILLGGFPRRPGMERGDLIGKNAGIMKKMGQALERYADHGCKVVVVANPAPTNCVVLSSHAPSIPRKNITCLSRLDHDRMIGMLLAEANRLLSLQDDNSAGGNXXXXXAGARERKLGPADIR 205

[Close]

BLAST of mRNA_L-elsbetiae_contig13233.2517.1 vs. uniprot
Match: A0A097IUN1_9PHAE (Malate dehydrogenase n=5 Tax=Sargassum TaxID=3015 RepID=A0A097IUN1_9PHAE)

HSP 1 Score: 187 bits (475), Expect = 1.500e-55
Identity = 101/146 (69.18%), Postives = 113/146 (77.40%), Query Frame = 0

Query:    1 MEVQDSLYSAGLDGLLATTDVAEAFDGAQVAILLGGFPRRPGMERGDLIDKNAGIMKRMGEALERHASRNCFVVVVANPAPTNCIVLAAHAPSIPRKNISCLSRLDHDRMAGMLLHEAN-RCLSGDGGXXXXXGRRRPLLGPADIR 145
            MEVQDSL+S  L+G+LATT+  EAF GAQVAILLGGFPRRPGMER DLI KNAGIMKRMGE LE +AS NC VVVVANPA TNC +L+ +APS+PRKNI+ LSRLDHDRM GMLLHEAN R +S          RR   L  AD+R
Sbjct:   54 MEVQDSLFSTALEGVLATTNDVEAFTGAQVAILLGGFPRRPGMERWDLIGKNAGIMKRMGELLETYASPNCKVVVVANPAQTNCYILSIYAPSLPRKNITSLSRLDHDRMIGMLLHEANSRLISASAANGTECVRR---LTAADVR 196

[Close]

BLAST of mRNA_L-elsbetiae_contig13233.2517.1 vs. uniprot
Match: A0A097IUK3_9PHAE (Malate dehydrogenase n=1 Tax=Dictyopteris undulata TaxID=156997 RepID=A0A097IUK3_9PHAE)

HSP 1 Score: 184 bits (466), Expect = 6.620e-54
Identity = 93/145 (64.14%), Postives = 110/145 (75.86%), Query Frame = 0

Query:    1 MEVQDSLYSAGLDGLLATTDVAEAFDGAQVAILLGGFPRRPGMERGDLIDKNAGIMKRMGEALERHASRNCFVVVVANPAPTNCIVLAAHAPSIPRKNISCLSRLDHDRMAGMLLHEANRCLSGDGGXXXXXGRRRPLLGPADIR 145
            ME+QDSL+   L+G+L TTD   AF+GAQVAILLGGFPR+PGMERG L+ KN GIMKRMG+ LERHASR+C  +VVANPA TNC+VLAA+APS+PRKN S LSRLDH+RM GMLL +AN  L+           R   L PAD+R
Sbjct:   54 MEIQDSLFPTALEGVLGTTDEVRAFEGAQVAILLGGFPRKPGMERGQLMAKNVGIMKRMGQLLERHASRDCKALVVANPAATNCLVLAANAPSLPRKNFSFLSRLDHERMVGMLLEKANSVLAAGTASHAVRSER---LRPADVR 195

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig13233.2517.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig13233.2517.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A097IUM0_9PHAE	1.730e-79	89.33	Malate dehydrogenase n=1 Tax=Punctaria latifolia T...	[more]
D7FQW1_ECTSI	1.180e-73	79.59	Malate dehydrogenase n=1 Tax=Ectocarpus siliculosu...	[more]
A0A6H5KVV0_9PHAE	3.400e-70	78.23	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A097IUP1_9PHAE	2.720e-69	74.68	Malate dehydrogenase n=1 Tax=Colpomenia sinuosa Ta...	[more]
A0A097IUL1_9PHAE	7.230e-68	76.73	Malate dehydrogenase n=1 Tax=Scytosiphon dotyi Tax...	[more]
A0A097IUP6_SACJA	1.690e-67	76.51	Malate dehydrogenase n=2 Tax=Saccharina TaxID=3093...	[more]
A0A097IUJ7_SCYLO	6.960e-67	73.38	Malate dehydrogenase n=1 Tax=Scytosiphon lomentari...	[more]
A0A097IUM7_UNDPI	1.940e-64	73.68	Malate dehydrogenase n=1 Tax=Undaria pinnatifida T...	[more]
A0A097IUN1_9PHAE	1.500e-55	69.18	Malate dehydrogenase n=5 Tax=Sargassum TaxID=3015 ...	[more]
A0A097IUK3_9PHAE	6.620e-54	64.14	Malate dehydrogenase n=1 Tax=Dictyopteris undulata...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.720		coord: 1..100 e-value: 2.2E-30 score: 107.4
IPR001236	Lactate/malate dehydrogenase, N-terminal	PFAM	PF00056	Ldh_1_N	coord: 9..99 e-value: 4.4E-20 score: 72.2
IPR010945	Malate dehydrogenase, type 2	PANTHER	PTHR23382	MALATE DEHYDROGENASE	coord: 1..116
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 2..101

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig13233	contig	L-elsbetiae_contig13233:992..4717 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig13233.2517.1	mRNA_L-elsbetiae_contig13233.2517.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig13233 992..4727 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig13233.2517.1 ID=prot_L-elsbetiae_contig13233.2517.1|Name=mRNA_L-elsbetiae_contig13233.2517.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=145bp
MEVQDSLYSAGLDGLLATTDVAEAFDGAQVAILLGGFPRRPGMERGDLID
KNAGIMKRMGEALERHASRNCFVVVVANPAPTNCIVLAAHAPSIPRKNIS
CLSRLDHDRMAGMLLHEANRCLSGDGGGGGGKGRRRPLLGPADIR

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001236	Lactate/malate_DH_N
IPR010945	Malate_DH_type2
IPR036291	NAD(P)-bd_dom_sf