mRNA_L-elsbetiae_contig13233.2517.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig13233.2517.1 vs. uniprot
Match: A0A097IUM0_9PHAE (Malate dehydrogenase n=1 Tax=Punctaria latifolia TaxID=90013 RepID=A0A097IUM0_9PHAE) HSP 1 Score: 254 bits (649), Expect = 3.030e-81 Identity = 137/153 (89.54%), Postives = 139/153 (90.85%), Query Frame = 2 Query: 2 GVAMEVQDSLYSAGLDGLLATTDVAEAFDGAQVAILLGGFPRRPGMERGDLIDKNAGIMKRMGEALERHASRNCFVVVVANPAPTNCIVLAAHAPSIPRKNISCLSRLDHDRMAGMLLHEANRCLSGDG-----GXXXXXGRRRPLLGPADIR 445 GVAMEVQDSLYS LDGLLATTD A AFDGAQVAILLGGFPRRPGMERGDLIDKNAGIMKRMGEALERHA+RNC VVVVANPAPTNCIVLA+HAPSIPRKNISCLSRLDHDRMAGMLLHEANRCLSG GXXXXX RRPLLGPADIR Sbjct: 51 GVAMEVQDSLYSTVLDGLLATTDEARAFDGAQVAILLGGFPRRPGMERGDLIDKNAGIMKRMGEALERHANRNCKVVVVANPAPTNCIVLASHAPSIPRKNISCLSRLDHDRMAGMLLHEANRCLSGTPHGPPTGXXXXXXXRRPLLGPADIR 203
BLAST of mRNA_L-elsbetiae_contig13233.2517.1 vs. uniprot
Match: D7FQW1_ECTSI (Malate dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQW1_ECTSI) HSP 1 Score: 234 bits (598), Expect = 2.010e-75 Identity = 120/150 (80.00%), Postives = 129/150 (86.00%), Query Frame = 2 Query: 2 GVAMEVQDSLYSAGLDGLLATTDVAEAFDGAQVAILLGGFPRRPGMERGDLIDKNAGIMKRMGEALERHASRNCFVVVVANPAPTNCIVLAAHAPSIPRKNISCLSRLDHDRMAGMLLHEANRCLSGDG--GXXXXXGRRRPLLGPADIR 445 GVAMEVQDSL+S LDG+LATTD A+AFDGAQVAILLGGFPRRPGMERGDLI+KNAGIMKRMG LE+HASRNC VVVVANPAPTNCIVLA++APSIPRKNISCLSRLDHDRMAGMLLHEANRCL+ G G LGPAD+R Sbjct: 55 GVAMEVQDSLFSTALDGILATTDEAKAFDGAQVAILLGGFPRRPGMERGDLIEKNAGIMKRMGGCLEKHASRNCKVVVVANPAPTNCIVLASYAPSIPRKNISCLSRLDHDRMAGMLLHEANRCLAAAAANGNGSAKGGSWQRLGPADVR 204
BLAST of mRNA_L-elsbetiae_contig13233.2517.1 vs. uniprot
Match: A0A6H5KVV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVV0_9PHAE) HSP 1 Score: 231 bits (588), Expect = 6.040e-72 Identity = 118/150 (78.67%), Postives = 129/150 (86.00%), Query Frame = 2 Query: 2 GVAMEVQDSLYSAGLDGLLATTDVAEAFDGAQVAILLGGFPRRPGMERGDLIDKNAGIMKRMGEALERHASRNCFVVVVANPAPTNCIVLAAHAPSIPRKNISCLSRLDHDRMAGMLLHEANRCLSGDG--GXXXXXGRRRPLLGPADIR 445 GVAMEVQDSL+S LDG+LATTD A+AFDGAQVAILLGGFPRRPGMERGDLI+KNAGIMKRMG LE++ASRNC VVVVANPAPTNC+VLA++APSIPRKNISCLSRLDHDRMAGMLLHEANRCL+ G G LGPAD+R Sbjct: 55 GVAMEVQDSLFSTALDGVLATTDEAKAFDGAQVAILLGGFPRRPGMERGDLIEKNAGIMKRMGCCLEKYASRNCKVVVVANPAPTNCVVLASYAPSIPRKNISCLSRLDHDRMAGMLLHEANRCLAAAAANGNGSAKGGSWQRLGPADVR 204
BLAST of mRNA_L-elsbetiae_contig13233.2517.1 vs. uniprot
Match: A0A097IUP1_9PHAE (Malate dehydrogenase n=1 Tax=Colpomenia sinuosa TaxID=87236 RepID=A0A097IUP1_9PHAE) HSP 1 Score: 228 bits (581), Expect = 4.820e-71 Identity = 118/157 (75.16%), Postives = 129/157 (82.17%), Query Frame = 2 Query: 2 GVAMEVQDSLYSAGLDGLLATTDVAEAFDGAQVAILLGGFPRRPGMERGDLIDKNAGIMKRMGEALERHASRNCFVVVVANPAPTNCIVLAAHAPSIPRKNISCLSRLDHDRMAGMLLHEANRCLS---------GDGGXXXXXGRRRPLLGPADIR 445 GVAMEVQDSL+ + LDG++ATTD A+AF+GAQVAILLGGFPRRPGMERGDLI KNAGIMKRMGE LE++ASR+C V+VVANPAPTNC VLA+HAPSIPRKNISCLSRLDHDRM GMLLHEANRCLS GG G R LGPADIR Sbjct: 54 GVAMEVQDSLFLSVLDGIIATTDEAKAFEGAQVAILLGGFPRRPGMERGDLIGKNAGIMKRMGEDLEKYASRDCKVLVVANPAPTNCCVLASHAPSIPRKNISCLSRLDHDRMVGMLLHEANRCLSVATGSNGNGSHGGISNGGGSARRRLGPADIR 210
BLAST of mRNA_L-elsbetiae_contig13233.2517.1 vs. uniprot
Match: A0A097IUL1_9PHAE (Malate dehydrogenase n=1 Tax=Scytosiphon dotyi TaxID=180438 RepID=A0A097IUL1_9PHAE) HSP 1 Score: 225 bits (573), Expect = 1.290e-69 Identity = 125/162 (77.16%), Postives = 134/162 (82.72%), Query Frame = 2 Query: 2 GVAMEVQDSLYSAGLDGLLATTDVAEAFDGAQVAILLGGFPRRPGMERGDLIDKNAGIMKRMGEALERHASRNCFVVVVANPAPTNCIVLAAHAPSIPRKNISCLSRLDHDRMAGMLLHEANRCLS--------------GDGGXXXXXGRRRPLLGPADIR 445 GVAME+QDSL+ LDG++ATTD A+AF+GAQVAILLGGFPRRPGMERGDLI KNAGIMKRMGEALER+ASRNC VVVVANPAPTNCIVLA+HAPSIPRKNISCLSRLDHDRM GMLLHEANRCL+ DG XXXXX RR LG ADIR Sbjct: 54 GVAMEIQDSLFLTVLDGVIATTDEAKAFEGAQVAILLGGFPRRPGMERGDLIGKNAGIMKRMGEALERYASRNCKVVVVANPAPTNCIVLASHAPSIPRKNISCLSRLDHDRMVGMLLHEANRCLAEASGSVGNGTLGGVSDGXXXXXXXRR---LGQADIR 212
BLAST of mRNA_L-elsbetiae_contig13233.2517.1 vs. uniprot
Match: A0A097IUP6_SACJA (Malate dehydrogenase n=2 Tax=Saccharina TaxID=309357 RepID=A0A097IUP6_SACJA) HSP 1 Score: 223 bits (568), Expect = 2.990e-69 Identity = 117/152 (76.97%), Postives = 127/152 (83.55%), Query Frame = 2 Query: 2 GVAMEVQDSLYSAGLDGLLATTDVAEAFDGAQVAILLGGFPRRPGMERGDLIDKNAGIMKRMGEALERHASRNCFVVVVANPAPTNCIVLAAHAPSIPRKNISCLSRLDHDRMAGMLLHEANRCLSGD----GGXXXXXGRRRPLLGPADIR 445 GVAMEVQDSL+S LDG+LATTD A+AFDGAQVAILLGGFPRRPGMERGDLI KNA IMKRMGEALER+A NC VVVVANPAPTNC+VL++HAPS+ R+NISCLSRLDHDRM GMLLHEANR LS GG G RR LGPAD+R Sbjct: 51 GVAMEVQDSLFSTVLDGVLATTDEAQAFDGAQVAILLGGFPRRPGMERGDLIGKNASIMKRMGEALERYACHNCKVVVVANPAPTNCLVLSSHAPSLSRRNISCLSRLDHDRMVGMLLHEANRSLSAPVSAGGGDAGARGWRR--LGPADVR 200
BLAST of mRNA_L-elsbetiae_contig13233.2517.1 vs. uniprot
Match: A0A097IUJ7_SCYLO (Malate dehydrogenase n=1 Tax=Scytosiphon lomentaria TaxID=27967 RepID=A0A097IUJ7_SCYLO) HSP 1 Score: 222 bits (566), Expect = 1.240e-68 Identity = 116/157 (73.89%), Postives = 125/157 (79.62%), Query Frame = 2 Query: 2 GVAMEVQDSLYSAGLDGLLATTDVAEAFDGAQVAILLGGFPRRPGMERGDLIDKNAGIMKRMGEALERHASRNCFVVVVANPAPTNCIVLAAHAPSIPRKNISCLSRLDHDRMAGMLLHEANRCLSGDGGXXXXX---------GRRRPLLGPADIR 445 GVAME+QDSL+ LDG++ATTD A+AF+GAQVAILLGGFPRRPGMERGDLI KNAGIMKRMGEALER+A RNC V+VVANPAPTNCIVLA+HAPSIPRKNISCLSRLDHDRM GMLLHEANRCL G G LGP DIR Sbjct: 54 GVAMEIQDSLFLTVLDGVVATTDEAKAFEGAQVAILLGGFPRRPGMERGDLIGKNAGIMKRMGEALERYAGRNCKVLVVANPAPTNCIVLASHAPSIPRKNISCLSRLDHDRMVGMLLHEANRCLGEASGSVRNGTVDWVSNGGGGSCRRLGPTDIR 210
BLAST of mRNA_L-elsbetiae_contig13233.2517.1 vs. uniprot
Match: A0A097IUM7_UNDPI (Malate dehydrogenase n=1 Tax=Undaria pinnatifida TaxID=74381 RepID=A0A097IUM7_UNDPI) HSP 1 Score: 215 bits (548), Expect = 3.450e-66 Identity = 115/155 (74.19%), Postives = 128/155 (82.58%), Query Frame = 2 Query: 2 GVAMEVQDSLYSAGLDGLLATTDVAEAFDGAQVAILLGGFPRRPGMERGDLIDKNAGIMKRMGEALERHASRNCFVVVVANPAPTNCIVLAAHAPSIPRKNISCLSRLDHDRMAGMLLHEANRCLS-------GDGGXXXXXGRRRPLLGPADIR 445 GVAME+QDSL+S LDG+LATTD +AF+GA+VAILLGGFPRRPGMERGDLI KNAGIMK+MG+ALER+A C VVVVANPAPTNC+VL++HAPSIPRKNI+CLSRLDHDRM GMLL EANR LS G XXXX G R LGPADIR Sbjct: 51 GVAMEIQDSLFSTVLDGVLATTDEGKAFEGAEVAILLGGFPRRPGMERGDLIGKNAGIMKKMGQALERYADHGCKVVVVANPAPTNCVVLSSHAPSIPRKNITCLSRLDHDRMIGMLLAEANRLLSLQDDNSAGGNXXXXXAGARERKLGPADIR 205
BLAST of mRNA_L-elsbetiae_contig13233.2517.1 vs. uniprot
Match: A0A097IUN1_9PHAE (Malate dehydrogenase n=5 Tax=Sargassum TaxID=3015 RepID=A0A097IUN1_9PHAE) HSP 1 Score: 192 bits (487), Expect = 2.700e-57 Identity = 104/149 (69.80%), Postives = 116/149 (77.85%), Query Frame = 2 Query: 2 GVAMEVQDSLYSAGLDGLLATTDVAEAFDGAQVAILLGGFPRRPGMERGDLIDKNAGIMKRMGEALERHASRNCFVVVVANPAPTNCIVLAAHAPSIPRKNISCLSRLDHDRMAGMLLHEAN-RCLSGDGGXXXXXGRRRPLLGPADIR 445 GVAMEVQDSL+S L+G+LATT+ EAF GAQVAILLGGFPRRPGMER DLI KNAGIMKRMGE LE +AS NC VVVVANPA TNC +L+ +APS+PRKNI+ LSRLDHDRM GMLLHEAN R +S RR L AD+R Sbjct: 51 GVAMEVQDSLFSTALEGVLATTNDVEAFTGAQVAILLGGFPRRPGMERWDLIGKNAGIMKRMGELLETYASPNCKVVVVANPAQTNCYILSIYAPSLPRKNITSLSRLDHDRMIGMLLHEANSRLISASAANGTECVRR---LTAADVR 196
BLAST of mRNA_L-elsbetiae_contig13233.2517.1 vs. uniprot
Match: A0A097IUK3_9PHAE (Malate dehydrogenase n=1 Tax=Dictyopteris undulata TaxID=156997 RepID=A0A097IUK3_9PHAE) HSP 1 Score: 184 bits (467), Expect = 5.280e-54 Identity = 93/147 (63.27%), Postives = 111/147 (75.51%), Query Frame = 2 Query: 5 VAMEVQDSLYSAGLDGLLATTDVAEAFDGAQVAILLGGFPRRPGMERGDLIDKNAGIMKRMGEALERHASRNCFVVVVANPAPTNCIVLAAHAPSIPRKNISCLSRLDHDRMAGMLLHEANRCLSGDGGXXXXXGRRRPLLGPADIR 445 + ME+QDSL+ L+G+L TTD AF+GAQVAILLGGFPR+PGMERG L+ KN GIMKRMG+ LERHASR+C +VVANPA TNC+VLAA+APS+PRKN S LSRLDH+RM GMLL +AN L+ R L PAD+R Sbjct: 52 IVMEIQDSLFPTALEGVLGTTDEVRAFEGAQVAILLGGFPRKPGMERGQLMAKNVGIMKRMGQLLERHASRDCKALVVANPAATNCLVLAANAPSLPRKNFSFLSRLDHERMVGMLLEKANSVLAAGTASHAVRSER---LRPADVR 195 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13233.2517.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig13233.2517.1 >prot_L-elsbetiae_contig13233.2517.1 ID=prot_L-elsbetiae_contig13233.2517.1|Name=mRNA_L-elsbetiae_contig13233.2517.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=145bp MEVQDSLYSAGLDGLLATTDVAEAFDGAQVAILLGGFPRRPGMERGDLIDback to top mRNA from alignment at L-elsbetiae_contig13233:992..4727- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig13233.2517.1 ID=mRNA_L-elsbetiae_contig13233.2517.1|Name=mRNA_L-elsbetiae_contig13233.2517.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3736bp|location=Sequence derived from alignment at L-elsbetiae_contig13233:992..4727- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig13233:992..4727- >mRNA_L-elsbetiae_contig13233.2517.1 ID=mRNA_L-elsbetiae_contig13233.2517.1|Name=mRNA_L-elsbetiae_contig13233.2517.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=870bp|location=Sequence derived from alignment at L-elsbetiae_contig13233:992..4727- (Laminarionema elsbetiae ELsaHSoW15)back to top |