mRNA_L-elsbetiae_contig13226.2513.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig13226.2513.1 vs. uniprot
Match: D7G2C0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2C0_ECTSI) HSP 1 Score: 167 bits (423), Expect = 2.500e-49 Identity = 74/79 (93.67%), Postives = 77/79 (97.47%), Query Frame = 2 Query: 2 FYGRPQILCGITSVAFSRSGRLLFAGYDDYNCYVWDVTNSTGIPAYQLAGHENRVSCLGVNPKGEALCTGSWDTLLKIW 238 ++G +ILCGITSVAFSRSGRLLFAGYDDYNCYVWDVTNSTGIPAYQLAGHENRVSCLGVNPKGEALCTGSWDTLLKIW Sbjct: 270 YFGNDKILCGITSVAFSRSGRLLFAGYDDYNCYVWDVTNSTGIPAYQLAGHENRVSCLGVNPKGEALCTGSWDTLLKIW 348
BLAST of mRNA_L-elsbetiae_contig13226.2513.1 vs. uniprot
Match: A0A836CC21_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC21_9STRA) HSP 1 Score: 163 bits (412), Expect = 1.170e-47 Identity = 71/79 (89.87%), Postives = 77/79 (97.47%), Query Frame = 2 Query: 2 FYGRPQILCGITSVAFSRSGRLLFAGYDDYNCYVWDVTNSTGIPAYQLAGHENRVSCLGVNPKGEALCTGSWDTLLKIW 238 ++G +ILCGITSVAFSRSGRLLFAGYDDYNCYVWDVT++TG+PAYQLAGHENRVSCLGVNPKGEALCTGSWDTLLKIW Sbjct: 272 YFGNDKILCGITSVAFSRSGRLLFAGYDDYNCYVWDVTSNTGMPAYQLAGHENRVSCLGVNPKGEALCTGSWDTLLKIW 350
BLAST of mRNA_L-elsbetiae_contig13226.2513.1 vs. uniprot
Match: A0A3R6Z757_9STRA (Uncharacterized protein n=7 Tax=Saprolegniaceae TaxID=4764 RepID=A0A3R6Z757_9STRA) HSP 1 Score: 137 bits (344), Expect = 1.840e-37 Identity = 56/78 (71.79%), Postives = 67/78 (85.90%), Query Frame = 2 Query: 5 YGRPQILCGITSVAFSRSGRLLFAGYDDYNCYVWDVTNSTGIPAYQLAGHENRVSCLGVNPKGEALCTGSWDTLLKIW 238 + +ILCGITSV++S+SGR +FAGYDDYNCY WDV ++TG YQL GHENRVSCLGV+P G+ALCTGSWDTLLK+W Sbjct: 280 FSNDKILCGITSVSYSKSGRFMFAGYDDYNCYCWDVLSNTGAHVYQLTGHENRVSCLGVSPSGQALCTGSWDTLLKVW 357
BLAST of mRNA_L-elsbetiae_contig13226.2513.1 vs. uniprot
Match: A0A7S2TQI3_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TQI3_9EUKA) HSP 1 Score: 130 bits (327), Expect = 4.980e-36 Identity = 59/78 (75.64%), Postives = 65/78 (83.33%), Query Frame = 2 Query: 5 YGRPQILCGITSVAFSRSGRLLFAGYDDYNCYVWDVTNSTGIPAYQLAGHENRVSCLGVNPKGEALCTGSWDTLLKIW 238 Y +ILCGITSVAFS+SG+ LFAGYDDYNCYVWD TG QL+GHENRVSCLGV+P+G ALCTGSWDTLLKIW Sbjct: 168 YANEKILCGITSVAFSKSGKHLFAGYDDYNCYVWDTI--TGENTQQLSGHENRVSCLGVHPEGRALCTGSWDTLLKIW 243
BLAST of mRNA_L-elsbetiae_contig13226.2513.1 vs. uniprot
Match: A0A397FXD3_9STRA (Uncharacterized protein n=6 Tax=Aphanomyces TaxID=100860 RepID=A0A397FXD3_9STRA) HSP 1 Score: 137 bits (344), Expect = 7.450e-36 Identity = 56/78 (71.79%), Postives = 67/78 (85.90%), Query Frame = 2 Query: 5 YGRPQILCGITSVAFSRSGRLLFAGYDDYNCYVWDVTNSTGIPAYQLAGHENRVSCLGVNPKGEALCTGSWDTLLKIW 238 + +ILCGITSV++S+SGR +FAGYDDYNCY WDV ++TG YQL GHENRVSCLGV+P G+ALCTGSWDTLLK+W Sbjct: 635 FSNDKILCGITSVSYSKSGRFMFAGYDDYNCYCWDVLSNTGAHVYQLTGHENRVSCLGVSPSGQALCTGSWDTLLKVW 712
BLAST of mRNA_L-elsbetiae_contig13226.2513.1 vs. uniprot
Match: A0A482SP31_9ARCH (WD40 repeat domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SP31_9ARCH) HSP 1 Score: 125 bits (315), Expect = 5.370e-35 Identity = 56/74 (75.68%), Postives = 60/74 (81.08%), Query Frame = 2 Query: 17 QILCGITSVAFSRSGRLLFAGYDDYNCYVWDVTNSTGIPAYQLAGHENRVSCLGVNPKGEALCTGSWDTLLKIW 238 I+CGITSV FSRSGR+LFAGYDDYNC WDV ST YQL GHENRVSCL + P GEALCTGSWDT+LKIW Sbjct: 104 NIVCGITSVTFSRSGRILFAGYDDYNCLGWDVLGSTDKHHYQLQGHENRVSCLDMAPSGEALCTGSWDTMLKIW 177
BLAST of mRNA_L-elsbetiae_contig13226.2513.1 vs. uniprot
Match: A0A7R9U5X6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5X6_9STRA) HSP 1 Score: 122 bits (307), Expect = 2.620e-34 Identity = 56/79 (70.89%), Postives = 65/79 (82.28%), Query Frame = 2 Query: 5 YGRPQILCGITSVAFSRSGRLLFAGYDDYNCYVWDVTNSTGIPAY-QLAGHENRVSCLGVNPKGEALCTGSWDTLLKIW 238 + +ILCG+TSV+FSRSGRLLFAGYDDY VWD + S+ PA+ L GHENRVSCLGV+P G+ALCTGSWDTLLKIW Sbjct: 57 FASEKILCGVTSVSFSRSGRLLFAGYDDYTNCVWDASLSSFSPAFGSLQGHENRVSCLGVSPNGDALCTGSWDTLLKIW 135
BLAST of mRNA_L-elsbetiae_contig13226.2513.1 vs. uniprot
Match: A0A6V1KDD3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1KDD3_HETAK) HSP 1 Score: 128 bits (321), Expect = 3.780e-34 Identity = 56/78 (71.79%), Postives = 64/78 (82.05%), Query Frame = 2 Query: 5 YGRPQILCGITSVAFSRSGRLLFAGYDDYNCYVWDVTNSTGIPAYQLAGHENRVSCLGVNPKGEALCTGSWDTLLKIW 238 +G +ILCGITSV+FS+SGRLLFAGYDDYN YVWD + ++L GH+NRVSCLGVNP GEAL TGSWDTLLKIW Sbjct: 269 FGNDRILCGITSVSFSKSGRLLFAGYDDYNSYVWDTLKNDPSETFKLQGHDNRVSCLGVNPTGEALVTGSWDTLLKIW 346
BLAST of mRNA_L-elsbetiae_contig13226.2513.1 vs. uniprot
Match: A0A7S2HG74_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HG74_9STRA) HSP 1 Score: 127 bits (319), Expect = 8.350e-34 Identity = 59/79 (74.68%), Postives = 66/79 (83.54%), Query Frame = 2 Query: 5 YGRPQILCGITSVAFSRSGRLLFAGYDDYNCYVWDVTNSTGIPAYQL-AGHENRVSCLGVNPKGEALCTGSWDTLLKIW 238 +G +ILCGITSV FS+SGRLLFAGYDDYN VWDV ++ A+QL HENRVSCLGVNPKG+ALCTGSWDTLLKIW Sbjct: 274 FGNDRILCGITSVGFSKSGRLLFAGYDDYNTIVWDVLSTGKQQAFQLHQPHENRVSCLGVNPKGDALCTGSWDTLLKIW 352
BLAST of mRNA_L-elsbetiae_contig13226.2513.1 vs. uniprot
Match: A0A7S0DSU9_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DSU9_9EUKA) HSP 1 Score: 125 bits (315), Expect = 3.250e-33 Identity = 56/78 (71.79%), Postives = 62/78 (79.49%), Query Frame = 2 Query: 5 YGRPQILCGITSVAFSRSGRLLFAGYDDYNCYVWDVTNSTGIPAYQLAGHENRVSCLGVNPKGEALCTGSWDTLLKIW 238 Y +ILCGITSVAFS+SGR LFAGYDDYNCYVWD + G+ QL GHENRVSCLGV G+ALCTG WDTLL+IW Sbjct: 276 YANEKILCGITSVAFSKSGRQLFAGYDDYNCYVWDTIS--GLNIQQLTGHENRVSCLGVQSNGQALCTGGWDTLLRIW 351 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13226.2513.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig13226.2513.1 >prot_L-elsbetiae_contig13226.2513.1 ID=prot_L-elsbetiae_contig13226.2513.1|Name=mRNA_L-elsbetiae_contig13226.2513.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=80bp FLWSSPDPLRHHVGGILPEWSALVRGLRRLQLLRLGRDQQHRHSGVPAGRback to top mRNA from alignment at L-elsbetiae_contig13226:3772..4842- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig13226.2513.1 ID=mRNA_L-elsbetiae_contig13226.2513.1|Name=mRNA_L-elsbetiae_contig13226.2513.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1071bp|location=Sequence derived from alignment at L-elsbetiae_contig13226:3772..4842- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig13226:3772..4842- >mRNA_L-elsbetiae_contig13226.2513.1 ID=mRNA_L-elsbetiae_contig13226.2513.1|Name=mRNA_L-elsbetiae_contig13226.2513.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=480bp|location=Sequence derived from alignment at L-elsbetiae_contig13226:3772..4842- (Laminarionema elsbetiae ELsaHSoW15)back to top |