mRNA_L-elsbetiae_contig13212.2509.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig13212.2509.1
Unique NamemRNA_L-elsbetiae_contig13212.2509.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig13212.2509.1 vs. uniprot
Match: D7FT36_ECTSI (Aspartyl protease family A01A, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT36_ECTSI)

HSP 1 Score: 466 bits (1199), Expect = 1.130e-158
Identity = 248/346 (71.68%), Postives = 275/346 (79.48%), Query Frame = 3
Query:  396 ATGKLDGKVDVQQLLDFIFPKSLQHPLSTGRLFAFAMYGPLDSNANLRSGHNGKRLVSTWETDTMCLQFEREDLLQVYISGGQPLFVLSEAQKEEVIAQADSHLKTAKGRGYRRQITRPEVIQLLSDLPRDAAGLASFHDAQKLIMRYREKQIARFKVIFPEVATGLAKKRFNRAEKS---------------PQGVSGQGRAMALVGETEMAEEGATHGPPLASAKRVPAGRSSGGEATRGGGFSRRAKFSADVAPPEMFMKDVGFTPAGVAKHTSKLLSTRAYKVGNIADGNDPGLTQNVKLIREDSPLEPGQGTWDPYACLRGQNIGGHVRSARSSTTAKRKA 1388
            ATGK DGKV+VQ+LL+FIFPKSLQHPLSTGRL+AFA+YGPLDSN+ LRSG+NG+R+VSTWE DTMCLQFERED+LQVYISGG+PLFVL++AQKEEVIAQADSHLKTAKGRGYRRQ+TR EV+ LLS LPR A+GL SFHDAQKLIM YREKQIARFKVIFPE+A G A K+  RA KS                 G  G G     + ET +    A  G  LAS + +  G S GG A R GG   RAKFSA+VAP EMF+KD+G TPAG+A HTSKLLSTRAYKV NIADGNDPGLTQNVKLIR+D   E GQGTWDPYACLRG NIGGHVRSARSSTTAKRKA
Sbjct:    9 ATGKRDGKVNVQELLEFIFPKSLQHPLSTGRLYAFALYGPLDSNSELRSGYNGQRVVSTWEIDTMCLQFEREDILQVYISGGRPLFVLNDAQKEEVIAQADSHLKTAKGRGYRRQVTRGEVVDLLSTLPRYASGLVSFHDAQKLIMGYREKQIARFKVIFPEIAGGAASKQAGRASKSCAHGNIGGGGKTLDGDVGRGGGGDRSCALAETTVVGR-AQAGKVLASTENMSTGCSGGGGAKRKGG---RAKFSAEVAPAEMFVKDMGHTPAGIANHTSKLLSTRAYKVSNIADGNDPGLTQNVKLIRDDRQPEQGQGTWDPYACLRGYNIGGHVRSARSSTTAKRKA 350          
BLAST of mRNA_L-elsbetiae_contig13212.2509.1 vs. uniprot
Match: A0A7S3Y154_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y154_HETAK)

HSP 1 Score: 244 bits (622), Expect = 5.560e-72
Identity = 151/349 (43.27%), Postives = 197/349 (56.45%), Query Frame = 3
Query:  378 TSDVCPATGKLDGKVDVQQLLDFIFPKSLQHPLSTGRLFAFAMYGPLDSNANLRSGHNGKRLVSTWETDTMCLQFEREDLLQVYISGGQPLFVLSEAQKEEVIAQADSHLKTAKGRGYRRQITRPEVIQLLSDLPRDAAGLASFHDAQKLIMRYREKQIARFKVIFPEVA------------TGLAKKRFNRAEKSPQGVSGQGRAMALVGETEMAEEGATHGPPLASAKRVPAGRSSGGEATRGGGFSRRAKFSADVAPPEMFMKDVGFTPAGVAKHTSKLLSTRAYKVGNIADGNDPGLTQNVKLIREDSPLEPGQGT-WDPYACLRGQNIGGHVRSARSSTTAKRK 1385
            T+ V     K   +V ++ L+ F+FP  LQHPLSTGRLFAF +YGPLD N+ LRSGH G+ +V  +E D MC +FERE +LQVY+ G     +LSE++ E VIAQAD   K AKG+    Q++R E   L +DLPRDA G  SFHD Q+ I+ YRE++IA  KVIFPE+                                 Q  A++  GE          G      K + AGR +   A + G  SRR      VAPPEMF K  GFT   ++   ++LLS  A+++ +I  GN   LTQNV+L+RE    EP  G  WD  +CLRG NIGGHV++A+S+TT KRK
Sbjct:   28 TASVITRRRKAQVQVSLESLMVFLFPPGLQHPLSTGRLFAFGLYGPLDENSQLRSGHKGQHIVQRFELDAMCQRFEREIILQVYL-GSDSFELLSESEVEAVIAQADRRTKVAKGKAGMPQVSREEAAALFADLPRDADGRLSFHDMQRKIVEYREQKIAELKVIFPELMGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPQQAAVSDAGEP---------GSXXXXFKLMDAGRQAPVSAKKKG-LSRR------VAPPEMFQKGTGFTEMEMSSQVNQLLSKHAFRITDIEHGNASELTQNVQLLRE--IREPDDGRKWDSNSCLRGSNIGGHVKTAKSATTVKRK 357          
BLAST of mRNA_L-elsbetiae_contig13212.2509.1 vs. uniprot
Match: A0A7S2B712_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B712_9STRA)

HSP 1 Score: 240 bits (613), Expect = 1.860e-71
Identity = 145/319 (45.45%), Postives = 187/319 (58.62%), Query Frame = 3
Query:  444 FIFPKSLQHPLSTGRLFAFAMYGPLDSNANLRSGHNGKRLVSTWETDTMCLQFEREDLLQVYISGGQPLFVLSEAQKEEVIAQADSHLKTAKGRGYRRQITRPEVIQLLSDL-PRDAAGLASFHDAQKLIMRYREKQIARFKVIFPEVATGLAKKRFNRAEKSPQGVSGQGRAMALVGETEMAEEGATHGPPLASAKRVPAGRSSGGEATRGGGFSRRAKFSADVAPPEMFMKDVGFTPAGVAKHTSKLLSTRAYKVGNIADGNDPGLTQNVKLIR---EDSPLEP-GQGTWDPYACLRGQNIGGHVRSARSSTTAKRK 1385
            F+FP++LQHP+STGRLFAF  YGPLD++A LRSGH G+ +V  WE DTMC QFERED+LQ+Y+  GQ    L+E Q EE++AQADS LK AKG+   +Q+T  EV  + SDL P  A GL  FHD Q+ I+ YR+  I   K +FPEV T  AK+                     +G  +   E    GP  A+      GRS+G   TRG       +  A VAP  MF++D G     VA  T+KLL  +A+ + NIADGN   LT NV+L+R   +DS   P G+ TWD     RGQ +G  V++ +SSTT KRK
Sbjct:    7 FVFPQNLQHPMSTGRLFAFGFYGPLDADARLRSGHKGQHVVGNWELDTMCRQFEREDILQIYMLPGQTHSNLTEDQAEEILAQADSRLKVAKGKAMMKQVTPEEVDMIFSDLEPDPATGLLQFHDCQQRIIEYRQYCIKLNKEVFPEV-TSKAKR---------------------IGSLKSGPEFTPIGPLGATYNEFGPGRSTG-RRTRG------VRVGASVAPATMFLRDKGLNSMEVASSTNKLLCHKAFSLCNIADGNSSELTANVRLVRSEPKDSAYTPEGRSTWDRNHATRGQLMGAFVKAPKSSTTVKRK 296          
BLAST of mRNA_L-elsbetiae_contig13212.2509.1 vs. uniprot
Match: A0A7S4A522_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A522_9STRA)

HSP 1 Score: 195 bits (495), Expect = 2.910e-53
Identity = 118/304 (38.82%), Postives = 163/304 (53.62%), Query Frame = 3
Query:  420 VDVQQLLDFIFPKSLQHPLSTGRLFAFAMYGPLDSNANLRSGHNGKRLVSTWETDTMCLQFEREDLLQVYISGGQPLFVLSEAQKEEVIAQADSHLKTAKGRGYRRQITRPEVIQLLSDLPRDAAGLASFHDAQKLIMRYREKQIARFKVIFPEVATGLAKKRFNRAEKSPQGVSGQGRAMALVGETEMAEEGATHGPPLASAKRVPAGRSSGGEATRGGGFSRR--AKFSADVAPPEMFMKDVGFTPAGVAKHTSKLLSTRAYKVGNIADGNDPGLTQNVKLIREDSP-LEPGQGTWDPYACL 1322
            V +  L+ F+FP  L HPLSTGRL+AF  YGPLD    LRSG  G+ ++  WE D MC QFERED LQVY+S G+ L  LSE Q+ E+I+QAD+ +K+ +G+G   Q+++ EV  +   +     G   FH+ Q+ ++ +RE +I + +V++P VA    +  F  ++ + +                           L S KR                 SRR  AK S  VAPP MF KD G   + VA   +++L TRAYK+ +I D N P LTQNV LIRED    E G+G W   +CL
Sbjct:   78 VSIDDLISFVFPADLYHPLSTGRLYAFGFYGPLDRQQQLRSGPKGQHVLGRWELDAMCHQFEREDCLQVYVSEGRALCTLSEEQQNELISQADARMKSKRGKGLMPQLSKDEVRDIFEGVETSPDGTMRFHEMQQRVLAFREDRIKKMRVMYPLVARKPLRVGFGGSQTASR-------------------------KSLTSTKR-----------------SRRTTAKVSPAVAPPTMFQKDKGLRNSDVATRINRMLCTRAYKICDIGD-NTPELTQNVALIREDDKDRELGEGPW---SCL 335          
BLAST of mRNA_L-elsbetiae_contig13212.2509.1 vs. uniprot
Match: A0A835ZGK5_9STRA (Putative aspartyl protease family A01A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGK5_9STRA)

HSP 1 Score: 182 bits (462), Expect = 3.310e-49
Identity = 115/322 (35.71%), Postives = 160/322 (49.69%), Query Frame = 3
Query:  417 KVDVQQLLDFIFPKSLQHPLSTGRLFAFAMYGPLDSNANLRSGHNGKRLVSTWETDTMCLQFEREDLLQVYISGGQPLFVLSEAQKEEVIAQADSHLKTAKGRGYRRQITRPEVIQLLSDLPRDAAGLASFHDAQKLIMRYREKQIARFKVIFPEVATGLAKKRFNRAEKSPQGVSGQGRAMALVGETEMAEEGATHGPPLASAKRVPAGRSSGGEATRGGGFSRRAKFSADVAPPEMFMKDVGFTPAGVAKHT--------------------SKLLSTRAYKVGNIADGNDPGLTQNVKLIREDSPLEP-GQGTWDPYAC 1319
            +V +  LL FIFP  LQHPLS+GRL  F  YGP   N  L SG  G+ +V  WE D+MC   +RED+LQVY+S  +PL  L  AQ+EE+IAQ+              QITR +VI L   +PR      SFHD QK+++ YR++++A  K+++P +A         RA+ + +G +                         A+ ++ P  R              + KFS DVAP  MF+KD G     +A                       +KLLST+A+K+ +I DGN+P LT NV+LIRED+  +P G   WD   C
Sbjct:   27 RVFLDDLLKFIFPVHLQHPLSSGRLIVFGYYGP-PVNGQLHSGQRGEHVVGDWELDSMCTTIDREDVLQVYVSDDRPLCELLAAQQEEIIAQSTVTFP---------QITREQVIALFEGVPRGTDNAFSFHDVQKVVVAYRDRRVADGKIMYPSLAAHSKSPPRKRAQSTEKGTA------------------------TAAQRQSPISR------------GHKFKFSPDVAPATMFLKDKGLGDMEMATQRPLHSIQTINEVLLLTCMVQINKLLSTKAFKISSIEDGNNPSLTGNVRLIREDTTHQPQGGAQWDETCC 302          
BLAST of mRNA_L-elsbetiae_contig13212.2509.1 vs. uniprot
Match: A0A7S2RFT5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RFT5_9STRA)

HSP 1 Score: 151 bits (381), Expect = 4.000e-39
Identity = 75/143 (52.45%), Postives = 99/143 (69.23%), Query Frame = 3
Query:  474 LSTGRLFAFAMYGPLDSNANLRSGHNGKRLVSTWETDTMCLQFEREDLLQVYISGGQPLFVLSEAQKEEVIAQADSHLKTAKGRGYRRQITRPEVIQLLSDLPRDAAGLASFHDAQKLIMRYREKQIARFKVIFPEVATGLAK 902
            +STGRL AF  +GPLD  A LRSG+ G+ +VS WE DTMC QFERED+LQVY+  GQ    L+E +  E++AQAD+ +K AKG+   +Q+T  EV +L +DL RD  GL +FHD Q+ IM++RE  I   KVIFP +  G+ K
Sbjct:    1 MSTGRLLAFGFHGPLDHAARLRSGYLGQHVVSRWELDTMCRQFEREDILQVYMQKGQSPSALAEEEALELLAQADTRMKVAKGKALMKQVTEEEVRELFADLHRDEDGLLTFHDMQQRIMQFRENAIKSNKVIFPHLTPGVGK 143          
BLAST of mRNA_L-elsbetiae_contig13212.2509.1 vs. uniprot
Match: A0A662XLY3_9STRA (NDK domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XLY3_9STRA)

HSP 1 Score: 155 bits (391), Expect = 1.670e-37
Identity = 104/310 (33.55%), Postives = 151/310 (48.71%), Query Frame = 3
Query:  369 EGTTSDVCPATGKLDGKVDVQQLLDFIFPKSLQHPLSTGRLFAFAMYGPLDSNANLRSGHNGKRLVSTWETDTMCLQFEREDLLQVYISGGQPLFVLSEAQKEEVIAQADSHLKTAKGRGYRRQITRPEVIQLLSDLPRDAAGLASFHDAQKLIMRYREKQIARFKVIFPEVATGLAKKRFNRAEKSPQGVSGQGRAMALVGETEMAEEGATHGPPLASAKRVPAGRSSGGEATRGGGFSRRAKFSADVAPPEMFMKDVGFTPAGVAKHTSKLLSTRAYKVGNIADGNDPGLTQNVKLIREDSPLEPGQG 1298
            EG  SD  P+  K    + + QL  F+FP  +QHP S GRLF FA+YGPLD+++ LRSG  G+ +V+  E  T+    ERED+L VY      +  LS+ ++EEV+ Q D  LK+        Q T  ++  L + LPRD  G  SFHD Q+++++ R +++   K           + RF R                                   +  R+ A +S     + GGG         + AP  +F+KDVG T A  A   ++LLS RA+++  + DGN P LTQNV+L+R D    P QG
Sbjct:  224 EGRASDGSPSLRKRSAMMALDQLQSFLFPAHVQHPNSAGRLFVFALYGPLDAHSRLRSGEKGQHVVTDGELATLATHMEREDILAVY-----EMCSLSQEEEEEVVRQVDHTLKSFP------QYTPRDIAALFASLPRDPQGALSFHDMQRVVLKERLRRVLCMKQRLHPALAAPIRNRFAR-----------------------------------TLTRMAAAQSG----SEGGGV-------VNGAPASLFLKDVGATSAENATLVTRLLSARAFQICQLQDGNSPELTQNVRLLRADR-ARPSQG 475          
BLAST of mRNA_L-elsbetiae_contig13212.2509.1 vs. uniprot
Match: A0A485KDQ3_9STRA (Aste57867_4356 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KDQ3_9STRA)

HSP 1 Score: 154 bits (389), Expect = 3.520e-37
Identity = 101/285 (35.44%), Postives = 144/285 (50.53%), Query Frame = 3
Query:  420 VDVQQLLDFIFPKSLQHPLSTGRLFAFAMYGPLDSNANLRSGHNGKRLVSTWETDTMCLQFEREDLLQVYISGGQPLFVLSEAQKEEVIAQADSHLKTAKGRGYRRQITRPEVIQLLSDLPRDAAGLASFHDAQKLIMRYREKQIARFKVIFPEVATGLAKKRFNRAEKSPQGVSGQGRAMALVGETEMAEEGATHGPPLASAKRVPAGRSSGGEATRGGGFSRRAKFSADVAPPEMFMKDVGFTPAGVAKHTSKLLSTRAYKVGNIADGNDPGLTQNVKLIRED 1274
            V +  L++F+FP ++QHP STGRLF F++YGPLD+ + LRSG  G  +V+  E +TMCL   RED+L VY   G     LS  ++EEV+ QAD H+K      +  + TR ++ +L   +P +  GL SFHD QK IM  R +++   K    ++ T LA                                     PP+ S  R     SS             AK   DVAPP +F+KD G   +  A   S+LL+  A+++ ++  GN P LTQNV+L+RED
Sbjct:  252 VGLDALMNFLFPPNIQHPNSTGRLFVFSLYGPLDAKSRLRSGEKGLHVVTDSELNTMCLSILREDILSVYGMIG-----LSRDEEEEVLRQADQHMK------HLPRYTRADIEELFRTVPHNKHGLMSFHDMQKRIMEERVRRVLCMK---DKLNTSLA-------------------------------------PPIVSKYRKSLSSSS-------------AKTKYDVAPPSLFVKDAGLNGSENAVLISRLLNCHAFQICHLDQGNSPDLTQNVRLLRED 472          
BLAST of mRNA_L-elsbetiae_contig13212.2509.1 vs. uniprot
Match: V9ENW6_PHYPR (NDK domain-containing protein n=8 Tax=Phytophthora TaxID=4783 RepID=V9ENW6_PHYPR)

HSP 1 Score: 150 bits (379), Expect = 7.010e-36
Identity = 107/322 (33.23%), Postives = 151/322 (46.89%), Query Frame = 3
Query:  381 SDVCPATGKLDGKVDVQ---QLLDFIFPKSLQHPLSTGRLFAFAMYGPLDSNANLRSGHNGKRLVSTWETDTMCLQFEREDLLQVYISGGQPLFVLSEAQKEEVIAQADSHLKTAKGRGYRRQITRPEVIQLLSDLPRDAAGLASFHDAQKLIMRYREKQIARFKVIFPEVATGLAKKRFNRAEKSPQGVSGQGRAMALVGETEMAEEGATHGPPLASAKRVPAGRSSGGEATRGGGFSRRAKFSADVAPPEMFMKDVGFTPAGVAKHTSKLLSTRAYKVGNIADGNDPGLTQNVKLIREDSPLE-PGQGTWDPYACLRGQN 1334
            + V    G++ GK  V    QLL+F+FP+ LQHP S GRLF F +YGPLD  + LRSG  G  +V+  E  TM  + ERED+L VY      +  LS+ ++EEV+ Q D  LK         Q T  ++  L + LPRD+ G  SFHD Q+ +++ R +++   K           + RF+R                                   +  RV A +SSG                 + AP   F+KDVG T    A   S+LLSTRA+++  + DGN P LTQNV+L+R D   +   +  W+P    R  N
Sbjct:  223 ASVMSLNGRIGGKTAVMGLDQLLNFLFPEHLQHPTSAGRLFVFGLYGPLDEYSRLRSGEKGLHIVTDRELTTMSARMEREDILAVY-----GMCSLSQEEEEEVVCQVDHLLKRFP------QYTPRDIETLFAPLPRDSDGNMSFHDMQQAVLKERLRRVVCMKERLHPALAEPVRNRFSR-----------------------------------TLTRVTATKSSG---------------LVNGAPSSFFLKDVGATNVENAALVSRLLSTRAFQICQMEDGNSPALTQNVRLVRFDKAQKFVEREPWNPNCQKRSHN 483          
BLAST of mRNA_L-elsbetiae_contig13212.2509.1 vs. uniprot
Match: A0A3R7K4N4_9STRA (NDK domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7K4N4_9STRA)

HSP 1 Score: 148 bits (374), Expect = 2.270e-35
Identity = 103/300 (34.33%), Postives = 143/300 (47.67%), Query Frame = 3
Query:  414 GKVDVQQLLDFIFPKSLQHPLSTGRLFAFAMYGPLDSNANLRSGHNGKRLVSTWETDTMCLQFEREDLLQVYISGGQPLFVLSEAQKEEVIAQADSHLKTAKGRGYRRQITRPEVIQLLSDLPRDAAGLASFHDAQKLIMRYREKQIARFKVIFPEVATGLAKKRFNRAEKSPQGVSGQGRAMALVGETEMAEEGATHGPPLASAKRVPAGRSSGGEATRGGGFSRRAKFSADVAPPEMFMKDVGFTPAGVAKHTSKLLSTRAYKVGNIADGNDPGLTQNVKLIREDSPLE-PGQGTWDP 1310
            G +D+ QLL+F+FPK LQHP S GRLF F +YGPLDS++ LRSG  G  +V+  E  TM  + ERED+L VY      +  LS+ ++EEV+ Q D  LK         Q T  ++  L S L RDA G  +FHD Q+ +M+ R +++   K         L + +F R                      +    AT G  L +                              AP   F+KDVG T    A   S+LLSTRA+++  + DGN P LTQNV+L+R D   +   +  W+P
Sbjct:  209 GAMDLDQLLNFLFPKHLQHPNSAGRLFVFGLYGPLDSHSRLRSGERGLHVVTDRELTTMSTRIEREDILAVY-----SMCSLSQEEEEEVVRQVDRLLKCYP------QYTPRDIETLFSPLLRDADGNMNFHDMQRAVMKERLRRVVCMKERLHPALGVLVRNQFART---------------------LTRLTATKGDSLVNG-----------------------------APSSFFLKDVGATDVENAALVSRLLSTRAFQICQMEDGNSPELTQNVRLVRPDKAQQFVNRDPWNP 447          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13212.2509.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FT36_ECTSI1.130e-15871.68Aspartyl protease family A01A, putative n=1 Tax=Ec... [more]
A0A7S3Y154_HETAK5.560e-7243.27Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2B712_9STRA1.860e-7145.45Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S4A522_9STRA2.910e-5338.82Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A835ZGK5_9STRA3.310e-4935.71Putative aspartyl protease family A01A n=1 Tax=Tri... [more]
A0A7S2RFT5_9STRA4.000e-3952.45Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A662XLY3_9STRA1.670e-3733.55NDK domain-containing protein n=2 Tax=Nothophytoph... [more]
A0A485KDQ3_9STRA3.520e-3735.44Aste57867_4356 protein n=1 Tax=Aphanomyces stellat... [more]
V9ENW6_PHYPR7.010e-3633.23NDK domain-containing protein n=8 Tax=Phytophthora... [more]
A0A3R7K4N4_9STRA2.270e-3534.33NDK domain-containing protein n=1 Tax=Phytophthora... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13212contigL-elsbetiae_contig13212:1105..4981 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score466.8
Seed ortholog evalue8.5e-129
Seed eggNOG ortholog2880.D7FT36
Hectar predicted targeting categoryother localisation
EggNOG OGs2CN2N@1,2QTJA@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionaspartyl protease family A01A, putative
Ec32 orthologEc-04_002690.1
Exons4
Model size1731
Cds size1038
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13212.2509.1prot_L-elsbetiae_contig13212.2509.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig13212 1458..4641 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815500.7543392-UTR-L-elsbetiae_contig13212:1104..14571622815500.7543392-UTR-L-elsbetiae_contig13212:1104..1457Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig13212 1105..1457 +
1691682928.485093-UTR-L-elsbetiae_contig13212:1104..14571691682928.485093-UTR-L-elsbetiae_contig13212:1104..1457Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig13212 1105..1457 +
1622815500.8194401-UTR-L-elsbetiae_contig13212:4641..49811622815500.8194401-UTR-L-elsbetiae_contig13212:4641..4981Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig13212 4642..4981 +
1691682928.5331116-UTR-L-elsbetiae_contig13212:4641..49811691682928.5331116-UTR-L-elsbetiae_contig13212:4641..4981Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig13212 4642..4981 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815500.7649841-CDS-L-elsbetiae_contig13212:1457..17271622815500.7649841-CDS-L-elsbetiae_contig13212:1457..1727Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13212 1458..1727 +
1691682928.4950342-CDS-L-elsbetiae_contig13212:1457..17271691682928.4950342-CDS-L-elsbetiae_contig13212:1457..1727Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13212 1458..1727 +
1622815500.7769907-CDS-L-elsbetiae_contig13212:3412..35451622815500.7769907-CDS-L-elsbetiae_contig13212:3412..3545Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13212 3413..3545 +
1691682928.5072534-CDS-L-elsbetiae_contig13212:3412..35451691682928.5072534-CDS-L-elsbetiae_contig13212:3412..3545Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13212 3413..3545 +
1622815500.7909276-CDS-L-elsbetiae_contig13212:3751..41701622815500.7909276-CDS-L-elsbetiae_contig13212:3751..4170Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13212 3752..4170 +
1691682928.5153563-CDS-L-elsbetiae_contig13212:3751..41701691682928.5153563-CDS-L-elsbetiae_contig13212:3751..4170Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13212 3752..4170 +
1622815500.8040087-CDS-L-elsbetiae_contig13212:4425..46411622815500.8040087-CDS-L-elsbetiae_contig13212:4425..4641Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13212 4426..4641 +
1691682928.5241659-CDS-L-elsbetiae_contig13212:4425..46411691682928.5241659-CDS-L-elsbetiae_contig13212:4425..4641Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13212 4426..4641 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig13212.2509.1

>prot_L-elsbetiae_contig13212.2509.1 ID=prot_L-elsbetiae_contig13212.2509.1|Name=mRNA_L-elsbetiae_contig13212.2509.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=346bp
MLSVKEGTTSDVCPATGKLDGKVDVQQLLDFIFPKSLQHPLSTGRLFAFA
MYGPLDSNANLRSGHNGKRLVSTWETDTMCLQFEREDLLQVYISGGQPLF
VLSEAQKEEVIAQADSHLKTAKGRGYRRQITRPEVIQLLSDLPRDAAGLA
SFHDAQKLIMRYREKQIARFKVIFPEVATGLAKKRFNRAEKSPQGVSGQG
RAMALVGETEMAEEGATHGPPLASAKRVPAGRSSGGEATRGGGFSRRAKF
SADVAPPEMFMKDVGFTPAGVAKHTSKLLSTRAYKVGNIADGNDPGLTQN
VKLIREDSPLEPGQGTWDPYACLRGQNIGGHVRSARSSTTAKRKA*
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mRNA from alignment at L-elsbetiae_contig13212:1105..4981+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig13212.2509.1 ID=mRNA_L-elsbetiae_contig13212.2509.1|Name=mRNA_L-elsbetiae_contig13212.2509.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3877bp|location=Sequence derived from alignment at L-elsbetiae_contig13212:1105..4981+ (Laminarionema elsbetiae ELsaHSoW15)
ACTGCCAGTAATCGCTGGATAAACGCTTCATGCGTTATATGCTCGCTGTA TGGAATGATAAGAGGAGATCAAGACGGCGGGAGCGGAAGCTAAAAAGAGA AACGAGAGGGACAATTCTCAGCACACGTATGTACCGTTTCGGGCAACGAA GCGGCGGGACCATTTTTTTCGGTACACGCAAGCACGTAACACTCGGAAGC TCGGCGGCGCGACGTCTCGTCAAGATCACCATCCCGCTCCCTACTAAGCA GGCTCTAGTTTCTAGAGGGGAGCGAGCTGGCTGTGTATCGAGTCTGCGAC GGCAACAGTACTTCTAGGCACATACTTACGCACAACTCGATTTTCATGCA CAGATGTTATCTGTCAAAGAGGGGACCACTTCCGATGTCTGCCCTGCGAC AGGAAAGCTGGATGGCAAAGTGGACGTGCAACAGCTTCTCGATTTTATTT TCCCTAAGTCCCTCCAACATCCGCTATCGACAGGCAGGCTGTTCGCGTTC GCCATGTACGGCCCCCTCGACTCGAACGCGAACCTACGCTCTGGACACAA CGGAAAGCGGCTGGTAAGCACGTGGGAGACTGACACCATGTGCCTACAGT TCGAGCGAGAAGATTTACTGCAGGTGGGTTGGTGTATTTCCAACCGAAAT GTTTACAGTCTCACATCCATGTACTTTATATACAACAACAGCAGCAGTGG TACGGCACGTGTATGTACATAGACTCGTCAAGTACCACCCTCCACCGGGA TACGGTATCACGTCGGAGACAAAACGAGCACCCCACCCAGATCGCTATTT AATTAACCATCATCGTCTAGACTAGCAGTTCGCCCACATTTATGTACTGT ATCTAGTATGTACTAATGGTTTGTAGATAGTCAAGATATTCTGCAAGCGC GCTATGTACATAGGCTTCCTGCAATAGAGCCCACAATTCTCAAAAAGAGC TGTGGGGGCAGCGGGGTGGATATTTATCTAGGAAATAGAGTTAAAACCCA CCCACAGCCACTTATTCAGATCGGGGGCCCTGATGCAGGAAGTGTTGGTA TGCCCGTGCATGTGTCCGGTTTAGGCAGTGGTTGATCACGTGTATTAGAT ATCAAGAAGCAGCACAGAAGGAAGGAAGAGGAAGAGTACCCGAGAAAGCA CGAGCTCGGGATCCCCGTGAATCACCAAAAGTAACCCAACGGTAGGTACT ACGATGGATCCTGTCTGCAGACTACCTGAAACTGTCACACCCAATATTCC ATATCTATCCATGCTCACACGAACAGGAAGCCTATACGTCTAGATTATGC ACTGAAGAACGGCATTGCAGCGATGAACAATACCGTGCGGCCGCAATCGC TTTAAAGTACGACACGAAGCATATGCGTGATTTTTACCACCGCATCGATT GCGAATTAAAGTTTAATGTTTGAAATCTTGGTACAAAGGAGATGTTTGTT GCCACTGCTGTTCTTCGACAATGTGCAACGAGGCCCTAGCGTGGCTGTAG TTTACTCGCGTAGATCACAGATACCAGGTATGAGTTTGGCGCAACTCTTC AAACATGAATCATGCCACCAGGATTGATTACACTTTCCACATATTACTGC AAGTCAAACCTTTCATGGGGTTGTGGGCTATGTAAAAGGCATTCGCTTCA GAAACATGTGGCGACACACTGATGGGCTGCTGCGTGTGTGATCTAAACAC ACGTAACCGCCCTCACAACCCACAAAAAAGCGTGGCAGGCGAGGTATACT TTAATTCCGCTCAAACTCAGCAGAGGATGGTTCTCGACAGTGACACTAAA GCGGCGTGTGTGTGCTATCAGCTCAACGACCCAAAAATGGCCGGGGGCAC CACTGAAAAGACAAATCGCTGACATGCAAAAACAGAGATCTTGAGATTAT GTCACAACAACTCCGTTTTGCCCCGGTGCTGCTGTTGTGGATCTGTGTGG AGAGTGCACATAGGGTGCCCCGAGGTGTTCGTACAGACTCCAGTGGCTGT GCTATTTTGTGCACCCAAGCCAGAGAGCGGTGGCCGCTGTGAGGGGTCAC CAAATCGTCACCAAACGGGCATCTAGTTCCAAAAGGCCTAAATCGGGGGC ACTATTTAGTCATGCTTCTTCGGGAGTACCGAGGACATGAACCATGATCC GATGATTTTTGTAATTTACTGAAGACTTACGGTAACAACCCATGGATTGA TCCTTGCAAATTGACCTCTACATTGCAGCAGTACCAACGCCTACCGTATG TATGACTGACAACGTCTTCTGGCATGCAACGTGGTGGGTGATGTGGTCCT TTCCAAAGGTCTACATCTCGGGTGGACAGCCGCTGTTCGTTCTGAGCGAA GCACAAAAGGAAGAGGTAATCGCGCAGGCAGACAGCCATCTAAAGACGGC GAAAGGTCGCGGCTACCGTAGACAAATCACGCGGCCAGAAGGTGGGCGAG GGAAAAACAAGTGCGAAGTATTCTCTTAATCCCCACCCTGGCAATGCAGG TATGTATACTCCGTAGCACTCTTCCTGGTGCCCTTGTTTCTCAAAGTCTC CTCTGCCTTTCTCGATCGCTCGCTCGCTCTCTGCTGGAATGCCGCCACTC TGTCTCTGACCTCGTCTGGCTTTTCTTTTCCATGCACTTTCCGGCAGTGA TCCAGCTTCTGTCTGACTTACCGAGAGACGCGGCGGGACTGGCAAGCTTC CACGATGCGCAGAAGCTCATCATGAGGTATCGAGAAAAACAGATCGCTCG GTTCAAAGTTATTTTCCCCGAAGTCGCGACGGGATTGGCCAAGAAAAGAT TTAACCGGGCTGAAAAATCACCACAGGGAGTTTCAGGGCAAGGTCGTGCT ATGGCTCTTGTCGGGGAGACAGAAATGGCCGAAGAAGGGGCTACACATGG CCCTCCTCTTGCCTCGGCTAAGCGGGTGCCTGCGGGTCGCTCTAGCGGCG GCGAGGCGACGAGAGGTGGTGGGTTTAGCAGAAGAGCCAAGTTCAGCGCT GACGTTGCTCCGCCCGAGATGTTTATGAAGGACGTAGGCTTCACCCCCGC GGGCGTGGCCAAGCATGTGAGAGATAATTCCCTTAACTTGGCTGTGTGGA TGCCCCGCTTCCGGAAAAACCTGTATTCGGTTGGTTTGACAGTCTCGAAC GTTTCACTGTCAGCGGGTTCCTACCGTACCTCGGGTTATCGTGAGCATTC TTGGGTAAAACCTGTTTCTCCAAATCATACCGCCTACAGGCCTCTAATCA CGCAAGTTGGTTGAAGCCTCGCTTTTTTCTCTCTCTCCCTCCCCCCTCGC CTTTCCTCTTCTCCTACTCAGACAAGCAAGCTTCTGAGCACTCGCGCGTA CAAGGTTGGCAACATAGCAGACGGAAATGACCCAGGCTTGACCCAAAATG TGAAGCTCATCCGAGAAGACAGTCCGCTCGAGCCGGGACAGGGAACATGG GACCCTTACGCTTGCCTGAGAGGGCAAAACATCGGTGGCCACGTGCGGTC GGCGAGGAGCTCAACCACGGCCAAGCGGAAGGCCTGAAACTGATGCGCCT GTTTCCGTTTTGTTTTTGCCGATCACGATTTTGTAGGCAGGCTGTTTCGA AACACGGTTCTTTCATTAGCTCTCGCGTTTTTCTGCCCGCCGCTCGTGTT TGACTGATTGGCGGGTTTTTTGTGGGGCCTTGTGAATTTGCGTGATGAGC TCGCATCTGCACCTTCTGCCGTACGCGAAGCTGATCGGCAGCACAACGAA GGATGCTTTCCGCTTGAGACCACTGTTTATGGCAAACAAATATTTTATCT CAATTTGTTTGTATCTTGTCAGGATTTATATGGACCCACCCCAAGATCAA GATTATGATGTGTACGTGTGTATGGGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig13212:1105..4981+

>mRNA_L-elsbetiae_contig13212.2509.1 ID=mRNA_L-elsbetiae_contig13212.2509.1|Name=mRNA_L-elsbetiae_contig13212.2509.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2076bp|location=Sequence derived from alignment at L-elsbetiae_contig13212:1105..4981+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTTATCTGTCAAAGAGGGGACCACTTCCGATGTCTGCCCTGCGACAGG
AAAGCTGGATGGCAAAGTGGACGTGCAACAGCTTCTCGATTTTATTTTCC
CTAAGTCCCTCCAACATCCGCTATCGACAGGCAGGCTGTTCGCGTTCGCC
ATGTACGGCCCCCTCGACTCGAACGCGAACCTACGCTCTGGACACAACGG
AAAGCGGCTGGTAAGCACGTGGGAGACTGACACCATGTGCCTACAGTTCG
AGCGAGAAGATTTACTGCAGATGTTATCTGTCAAAGAGGGGACCACTTCC
GATGTCTGCCCTGCGACAGGAAAGCTGGATGGCAAAGTGGACGTGCAACA
GCTTCTCGATTTTATTTTCCCTAAGTCCCTCCAACATCCGCTATCGACAG
GCAGGCTGTTCGCGTTCGCCATGTACGGCCCCCTCGACTCGAACGCGAAC
CTACGCTCTGGACACAACGGAAAGCGGCTGGTAAGCACGTGGGAGACTGA
CACCATGTGCCTACAGTTCGAGCGAGAAGATTTACTGCAGGTCTACATCT
CGGGTGGACAGCCGCTGTTCGTTCTGAGCGAAGCACAAAAGGAAGAGGTA
ATCGCGCAGGCAGACAGCCATCTAAAGACGGCGAAAGGTCGCGGCTACCG
TAGACAAATCACGCGGCCAGAAGGTCTACATCTCGGGTGGACAGCCGCTG
TTCGTTCTGAGCGAAGCACAAAAGGAAGAGGTAATCGCGCAGGCAGACAG
CCATCTAAAGACGGCGAAAGGTCGCGGCTACCGTAGACAAATCACGCGGC
CAGAAGTGATCCAGCTTCTGTCTGACTTACCGAGAGACGCGGCGGGACTG
GCAAGCTTCCACGATGCGCAGAAGCTCATCATGAGGTATCGAGAAAAACA
GATCGCTCGGTTCAAAGTTATTTTCCCCGAAGTCGCGACGGGATTGGCCA
AGAAAAGATTTAACCGGGCTGAAAAATCACCACAGGGAGTTTCAGGGCAA
GGTCGTGCTATGGCTCTTGTCGGGGAGACAGAAATGGCCGAAGAAGGGGC
TACACATGGCCCTCCTCTTGCCTCGGCTAAGCGGGTGCCTGCGGGTCGCT
CTAGCGGCGGCGAGGCGACGAGAGGTGGTGGGTTTAGCAGAAGAGCCAAG
TTCAGCGCTGACGTTGCTCCGCCCGAGATGTTTATGAAGGACGTAGGCTT
CACCCCCGCGGGCGTGGCCAAGCATTGATCCAGCTTCTGTCTGACTTACC
GAGAGACGCGGCGGGACTGGCAAGCTTCCACGATGCGCAGAAGCTCATCA
TGAGGTATCGAGAAAAACAGATCGCTCGGTTCAAAGTTATTTTCCCCGAA
GTCGCGACGGGATTGGCCAAGAAAAGATTTAACCGGGCTGAAAAATCACC
ACAGGGAGTTTCAGGGCAAGGTCGTGCTATGGCTCTTGTCGGGGAGACAG
AAATGGCCGAAGAAGGGGCTACACATGGCCCTCCTCTTGCCTCGGCTAAG
CGGGTGCCTGCGGGTCGCTCTAGCGGCGGCGAGGCGACGAGAGGTGGTGG
GTTTAGCAGAAGAGCCAAGTTCAGCGCTGACGTTGCTCCGCCCGAGATGT
TTATGAAGGACGTAGGCTTCACCCCCGCGGGCGTGGCCAAGCATACAAGC
AAGCTTCTGAGCACTCGCGCGTACAAGGTTGGCAACATAGCAGACGGAAA
TGACCCAGGCTTGACCCAAAATGTGAAGCTCATCCGAGAAGACAGTCCGC
TCGAGCCGGGACAGGGAACATGGGACCCTTACGCTTGCCTGAGAGGGCAA
AACATCGGTGGCCACGTGCGGTCGGCGAGGAGCTCAACCACGGCCAAGCG
GAAGGCCTGAACAAGCAAGCTTCTGAGCACTCGCGCGTACAAGGTTGGCA
ACATAGCAGACGGAAATGACCCAGGCTTGACCCAAAATGTGAAGCTCATC
CGAGAAGACAGTCCGCTCGAGCCGGGACAGGGAACATGGGACCCTTACGC
TTGCCTGAGAGGGCAAAACATCGGTGGCCACGTGCGGTCGGCGAGGAGCT
CAACCACGGCCAAGCGGAAGGCCTGA
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