mRNA_L-elsbetiae_contig13200.2501.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig13200.2501.1 vs. uniprot
Match: D7G011_ECTSI (Trehalose 6-phosphate synthase, family GT20 / Trehalose 6-phosphate phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G011_ECTSI) HSP 1 Score: 342 bits (878), Expect = 1.300e-106 Identity = 178/228 (78.07%), Postives = 191/228 (83.77%), Query Frame = 1 Query: 1 RLKELHGDRVVVAGVERVEKIKGVWLKMLAFEDMLSRYPDLVGRVSMHEVGIANPARGNDYRACQESLSELAGRMNAKHGEGTVVYEERDPNNATLAQRAALMAVSSVFVKTPVHNGLSTVPIEFRVVQEHRXXXXXXXXXXXXXXXXXXARAPGVLILSEAVSCSPALRGSFLVNPWQVRAVADAMANAVTAEADDRTAWHEEDAEWCESNTTAKWAEDVLGVLTTV 684 RL LHGDRVVVAGVERVEKIKGVWLK+LAFEDML RYP LVGRVSMHEVGIANPARG+DYRACQESLSELA RMNAKHG GTV+YEERDP +ATLA+RAALM+VSSVFVKTPVHNGLST+PIEFRVVQEH +PGVLILSEAVSCSP +RGS VNPWQV AVADAMA+AV AEA +R A HEED EWCE+NTTA+WAEDVLGVLTTV Sbjct: 353 RLTGLHGDRVVVAGVERVEKIKGVWLKLLAFEDMLRRYPGLVGRVSMHEVGIANPARGSDYRACQESLSELADRMNAKHGAGTVIYEERDPKDATLARRAALMSVSSVFVKTPVHNGLSTMPIEFRVVQEH--------LRAEARDKQLSGGSPGVLILSEAVSCSPTMRGSLSVNPWQVEAVADAMADAVMAEAGERIALHEEDMEWCETNTTAQWAEDVLGVLTTV 572
BLAST of mRNA_L-elsbetiae_contig13200.2501.1 vs. uniprot
Match: A0A7S2AZP8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AZP8_9STRA) HSP 1 Score: 125 bits (315), Expect = 1.630e-31 Identity = 72/218 (33.03%), Postives = 116/218 (53.21%), Query Frame = 1 Query: 22 DRVVVAGVERVEKIKGVWLKMLAFEDMLSRYPDLVGRVSMHEVGIANPARGNDYRACQESLSELAGRMNAK---HGEGTVVYEERDPNNATLAQRAALMAVSSVFVKTPVHNGLSTVPIEFRVVQEHRXXXXXXXXXXXXXXXXXXARAPGVLILSEAVSCSPALRGSFLVNPWQVRAVADAMANAVTAEADDRTAWHEEDAEWCESNTTAKWAEDVL 666 D+ V AG++R+E++KGV LK+LAFE L + P G V ++++ +A RG+DY + L R+N K +GE V+++E + + L R AL++V+ V + T V +GL+ P EF + Q PGV++LSE SC+ L+G+ +NPW + VA+A+ + +T ++R + D E+ NTTA W L Sbjct: 28 DKTVFAGIDRMERLKGVPLKLLAFERFLEKNPTRAGNVVLYQISLAVRERGDDYSTTSAQVQALVNRINNKFGVNGEPVVIFDEVEETHLQLKHRLALLSVADVLLVTTVRDGLNRWPFEFVLAQAAMGGEGSEYLIKPP--------VPGVMVLSEFTSCTRVLQGALHINPWCIDEVAEALEDCMTMHPEERQKRLDMDLEYVTVNTTAAWCRQCL 237
BLAST of mRNA_L-elsbetiae_contig13200.2501.1 vs. uniprot
Match: A0A7S2F9H1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2F9H1_9STRA) HSP 1 Score: 125 bits (315), Expect = 5.800e-30 Identity = 72/218 (33.03%), Postives = 116/218 (53.21%), Query Frame = 1 Query: 22 DRVVVAGVERVEKIKGVWLKMLAFEDMLSRYPDLVGRVSMHEVGIANPARGNDYRACQESLSELAGRMNAK---HGEGTVVYEERDPNNATLAQRAALMAVSSVFVKTPVHNGLSTVPIEFRVVQEHRXXXXXXXXXXXXXXXXXXARAPGVLILSEAVSCSPALRGSFLVNPWQVRAVADAMANAVTAEADDRTAWHEEDAEWCESNTTAKWAEDVL 666 D+ V AG++R+E++KGV LK+LAFE L + P G V ++++ +A RG+DY + L R+N K +GE V+++E + + L R AL++V+ V + T V +GL+ P EF + Q PGV++LSE SC+ L+G+ +NPW + VA+A+ + +T ++R + D E+ NTTA W L Sbjct: 257 DKTVFAGIDRMERLKGVPLKLLAFERFLEKNPTRAGNVVLYQISLAVRERGDDYSTTSAQVQALVNRINNKFGVNGEPVVIFDEVEETHLQLKHRLALLSVADVLLVTTVRDGLNRWPFEFVLAQAAMGGEGSEYLIKPP--------VPGVMVLSEFTSCTRVLQGALHINPWCIDEVAEALEDCMTMHPEERQKRLDMDLEYVTVNTTAAWCRQCL 466
BLAST of mRNA_L-elsbetiae_contig13200.2501.1 vs. uniprot
Match: K8YR86_NANGC (Alpha,alpha-trehalose-phosphate synthase (UDP-forming) n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YR86_NANGC) HSP 1 Score: 126 bits (317), Expect = 9.730e-30 Identity = 78/246 (31.71%), Postives = 122/246 (49.59%), Query Frame = 1 Query: 1 RLKELHGDRVVVAGVERVEKIKGVWLKMLAFEDMLSRYPDLVGRVSMHEVGIANPARGNDYRACQESLSELAGRMNAKHGE---GTVVYEERDPNNATLAQRAALMAVSSVFVKTPVHNGLSTVPIEFRVVQ-------EHRXXXXXXXXXXXXXXXXXXARA--------------PGVLILSEAVSCSPALRGSFLVNPWQVRAVADAMANAVTAEADDRTAWHEEDAEWCESNTTAKWAEDVL 666 +L++ R V+ G++R+E+I+G+ LK+LAFE L+ +P+ G+V + +VGI RG DY + + ++ +NA H + VV+ ER+ L R L+A++ VF+ T +GL+ +P+EF Q E A+ PGVLILSE VSC+ L G+ VNPWQ+ + MA A+ A++R A H D + S T +WA +L Sbjct: 590 KLRQQFAGRKVILGIDRLERIRGIPLKLLAFERFLATHPEWKGKVVLFQVGITASERGEDYPRTKREVRQMVTSINAAHADLPAPPVVFIERNERQMRLQDRMPLLAMADVFIVTSPRDGLNRMPLEFVAAQAVVVGGKEGGSASSSRRSSQVDLTAEGAAKGTVECPPPTEEDTPLPGVLILSEFVSCTRVLLGAMFVNPWQIEGTGELMARALGMSAEERLARHARDWRFVNSQTVLQWAYQIL 835
BLAST of mRNA_L-elsbetiae_contig13200.2501.1 vs. uniprot
Match: A0A7S2BW05_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BW05_9STRA) HSP 1 Score: 122 bits (306), Expect = 2.790e-28 Identity = 72/225 (32.00%), Postives = 117/225 (52.00%), Query Frame = 1 Query: 1 RLKELHGDRVVVAGVERVEKIKGVWLKMLAFEDMLSRYPDLVGRVSMHEVGIANPARGNDYRACQESLSELAGRMNAKHG---EGTVVYEERDPNNATLAQRAALMAVSSVFVKTPVHNGLSTVPIEFRVVQEHRXXXXXXXXXXXXXXXXXXARAPGVLILSEAVSCSPALRGSFLVNPWQVRAVADAMANAVTAEADDRTAWHEEDAEWCESNTTAKWAEDVL 666 RL L R + G++R+E++KGV LK+LAFE L + +V +H++G++ AR DY + L R+N + G E V+Y+ER+ + L R L++V+ V + T V +GL+ P E+ + Q + +R PG++ILS+ SC+ L G+ VNPWQ+ VA+ + +V A++R + D ++ NTTA W L Sbjct: 445 RLNCLKRGRTMFVGMDRMERLKGVPLKLLAFERFLENNEEYSKKVVLHQIGMSVRARPQDYEQTTAEVRALVKRINERFGDPQEPVVIYDEREESQLPLKDRLGLLSVADVLLSTTVRDGLNRWPFEYVLAQSQQQGPGSEYVE---------SRPPGIMILSDFTSCTRVLHGALHVNPWQIDQVANQILRSVMMSAEERMDRFKMDVDYVTLNTTATWCRRCL 660
BLAST of mRNA_L-elsbetiae_contig13200.2501.1 vs. uniprot
Match: A0A7S2BXE3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BXE3_9STRA) HSP 1 Score: 120 bits (300), Expect = 1.290e-27 Identity = 69/220 (31.36%), Postives = 114/220 (51.82%), Query Frame = 1 Query: 16 HGDRVVVAGVERVEKIKGVWLKMLAFEDMLSRYPDLVGRVSMHEVGIANPARGNDYRACQESLSELAGRMNAKHG---EGTVVYEERDPNNATLAQRAALMAVSSVFVKTPVHNGLSTVPIEFRVVQEHRXXXXXXXXXXXXXXXXXXARAPGVLILSEAVSCSPALRGSFLVNPWQVRAVADAMANAVTAEADDRTAWHEEDAEWCESNTTAKWAEDVL 666 R + G++R+E++KGV LK+LAFE L + +V +H++G++ AR DY + L R+N + G E V+Y+ER+ + L R L++V+ V + T V +GL+ P E+ + Q + +R PG++ILS+ SC+ L G+ VNPWQ+ VA+ + +V A++R + D ++ NTTA W L Sbjct: 4 EAGRTMFVGMDRMERLKGVPLKLLAFERFLENNEEYSKKVVLHQIGMSVRARPQDYEQTTAEVRALVKRINERFGDPQEPVVIYDEREESQLPLKDRLGLLSVADVLLSTTVRDGLNRWPFEYVLAQSQQQGPGSEYVE---------SRPPGIMILSDFTSCTRVLHGALHVNPWQIDQVANQILRSVMMSAEERMDRFKMDVDYVTLNTTATWCRRCL 214
BLAST of mRNA_L-elsbetiae_contig13200.2501.1 vs. uniprot
Match: A0A7S3HP37_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HP37_9STRA) HSP 1 Score: 113 bits (282), Expect = 1.490e-25 Identity = 68/228 (29.82%), Postives = 116/228 (50.88%), Query Frame = 1 Query: 7 KELHGDRVVVAGVERVEKIKGVWLKMLAFEDMLSRYPDLVGRVSMHEVGIANPARGNDYRACQESLSELAGRMNAKH-----GEGTVVYEERDPNNATLAQRAALMAVSSVFVKTPVHNGLSTVPIEFRVVQEHRXXXXXXXXXXXXXXXXXXARAPGVLILSEAVSCSPALRGSFLVNPWQVRAVADAMANAVTAEADDRTAWHEEDAEWCESNTTAKWAEDVLGVL 675 KE ++VVAG++R+E++KG+ LK++A + ++ P +G++ +GI+ RG DYR Q + + +N K+ + + +EER + LAQR AV+ V + T +GL+ P+EF + ++ GV+++SE VS + +RG+ VNPW+V+ V A+ A+ E +R + E+ + TTA WA VL L Sbjct: 199 KERFAGKIVVAGMDRLERLKGIPLKLMAIDQFMAENPQWLGKIVFTLIGISAIERGQDYRQTQHDVKIMVRELNLKYLSNKNKDPLIYFEERADKDIRLAQRLPFFAVADVLMITSTRDGLNRYPMEFTLARQKHGEFADMKAAVGQPNQ-------GVVVISEFVSSARVMRGALNVNPWRVQEVKMALQRALEMEQGERADRTRRNLEYSQRLTTANWATQVLSDL 419
BLAST of mRNA_L-elsbetiae_contig13200.2501.1 vs. uniprot
Match: A0A2R5GU15_9STRA (Alpha,alpha-trehalose-phosphate synthase UDP-forming 5 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GU15_9STRA) HSP 1 Score: 110 bits (276), Expect = 2.880e-24 Identity = 67/214 (31.31%), Postives = 111/214 (51.87%), Query Frame = 1 Query: 25 RVVVAGVERVEKIKGVWLKMLAFEDMLSRYPDLVGRVSMHEVGIANPARGNDYRACQESLSELAGRMNAKHGEGTVVYEERDPNNATLAQRAALMAVSSVFVKTPVHNGLSTVPIEFRVVQEHRXXXXXXXXXXXXXXXXXXARAPGVLILSEAVSCSPALRGSFLVNPWQVRAVADAMANAVTAEADDRTAWHEEDAEWCESNTTAKWAEDVL 666 R ++ G++ VE ++G+ LK+LA + + YP L RV + ++G+ +R NDYR C + + L + K G+ V YEERD + L +R AL+ + VF+ T V G+ +P E+ + + + G ++LSE +CS L GS VNP++ A+A + A++ A +RTA D + E NT A WA+ ++ Sbjct: 346 RQMLLGIDEVEGLRGLGLKLLALDRLFRDYPYLRERVVLKQIGLRLDSRPNDYRQCHDEVVGLVAHLQKKWGKHVVEYEERD--SIDLTERLALLQNADVFLNTSVRVGVDMLPFEYLMARRN---------------------PAGCIVLSEFSACSRVLHGSLRVNPFKTSALAATIEEALSMSAAERTARCARDLVYIERNTLADWADRII 536
BLAST of mRNA_L-elsbetiae_contig13200.2501.1 vs. uniprot
Match: A0A835YZM5_9STRA (Glycosyltransferase family 20-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZM5_9STRA) HSP 1 Score: 107 bits (266), Expect = 6.300e-23 Identity = 75/245 (30.61%), Postives = 120/245 (48.98%), Query Frame = 1 Query: 4 LKELHGDRVVVAGVERVEKIKGVWLKMLAFEDMLSRYPDLVGRVSMHE-------------VGIANPARGNDYRACQESLSELAGRMNAKHGEG---TVVYEERDPNNATLAQRAALMAVSSVFVKTPVHNGLSTVPIEFRVVQE-HRXXXXXXXXXXXXXXXXXXARAPGVLILSEA-----------VSCSPALRGSFLVNPWQVRAVADAMANAVTAEADDRTAWHEEDAEWCESNTTAKWA 654 LK+ + R V G+++VE++KG+ LK++AFE ML P+L RV + VG++ R +D+ + L LA +N K+ G VVY ++D + TL QR + ++ V T V +GL+ +P+EF + HR + PGV++LSE SC LRG+ +NPW+V VA +MA + + R A H +D ++ ++TT+ WA Sbjct: 672 LKQQYKGRFVFVGIDKVERLKGLPLKLMAFERMLEGDPELAERVCLXXXXXXXXXXXXXXXVGLSVHEREDDFEQSTKELISLATTINNKYSRGGRPVVVYTDKDEASFTLQQRLPYLCLADCLVNTAVRDGLNRLPLEFAIAHTVHRP------------------QCPGVVMLSEXXXXXXXXXXEFTSCMRVLRGAVRINPWKVDEVAASMAATLDMSLETRLARHAKDEDFVVNHTTSFWA 898
BLAST of mRNA_L-elsbetiae_contig13200.2501.1 vs. uniprot
Match: A0A0P1AS38_PLAHL (Trehalose-phosphatase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AS38_PLAHL) HSP 1 Score: 105 bits (263), Expect = 1.540e-22 Identity = 64/225 (28.44%), Postives = 104/225 (46.22%), Query Frame = 1 Query: 1 RLKELHGDRVVVAGVERVEKIKGVWLKMLAFEDMLSRYPDLVGRVSMHEVGIANPARGNDYRACQESLSELAGRMNAKHGEGTVVYEERDPNNATLAQRAALMAVSSVFVKTPVHNGLSTVPIEFRVVQEHRXXXXXXXXXXXXXXXXXXARAPGVLILSEAVSCSPALRGSFLVNPWQVRAVADAMANAVTAEADDRTAWHEEDAEWCESNTTAKWAEDVLGVL 675 +L++ H +V++AGV+ +++ G+ LKMLAFE S P ++ E R D +S+L R+ HG G + YEE + T+ +R AL S + + T + GL+ P+EF + PGV+ILSE +C L G+ VNPW + + +++ NA+T ++R D + + A W + VL VL Sbjct: 648 KLRDKHAGKVLIAGVDVCQRLSGIPLKMLAFEQFFSNCPSWKDKLVFVERATLTQTRLGDQNYSSNEISKLVKRITKAHGPGCIDYEESS-SPLTIEERVALWLASDILMVTSIREGLNLKPLEFVFAK-----------------GVNSTDRPGVVILSEFSACCCVLNGAVRVNPWNITGLVNSLDNALTMSNEERLGRRARDLPYITNQPAANWTKQVLSVL 854 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13200.2501.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig13200.2501.1 >prot_L-elsbetiae_contig13200.2501.1 ID=prot_L-elsbetiae_contig13200.2501.1|Name=mRNA_L-elsbetiae_contig13200.2501.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=228bp RLKELHGDRVVVAGVERVEKIKGVWLKMLAFEDMLSRYPDLVGRVSMHEVback to top mRNA from alignment at L-elsbetiae_contig13200:1150..4789- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig13200.2501.1 ID=mRNA_L-elsbetiae_contig13200.2501.1|Name=mRNA_L-elsbetiae_contig13200.2501.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3640bp|location=Sequence derived from alignment at L-elsbetiae_contig13200:1150..4789- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig13200:1150..4789- >mRNA_L-elsbetiae_contig13200.2501.1 ID=mRNA_L-elsbetiae_contig13200.2501.1|Name=mRNA_L-elsbetiae_contig13200.2501.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1368bp|location=Sequence derived from alignment at L-elsbetiae_contig13200:1150..4789- (Laminarionema elsbetiae ELsaHSoW15)back to top |