mRNA_L-elsbetiae_contig10.25.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10.25.1 vs. uniprot
Match: A0A1L2F1Q1_9PHAE (Cytochrome b6-f complex subunit 4 n=58 Tax=Stramenopiles TaxID=33634 RepID=A0A1L2F1Q1_9PHAE) HSP 1 Score: 324 bits (831), Expect = 2.330e-112 Identity = 153/160 (95.62%), Postives = 160/160 (100.00%), Query Frame = 1 Query: 1 MSILKKPDLTDPKLRAKLAKGMGHNYYGEPAWPNDIFYMFPICILGTFVLVIGLAVMEPSALGEKANPFATPLEILPEWYFFPTFNLLRVLPNKLLGVLAMAAVPAGLITVPFIENVNKFQNPFRRPVASTVFLVGTFVAIWLGIGACLPISKAITLGLF 480 MSILKKPDLTDPKLRAKLAKGMGHNYYGEPAWPNDIFYMFPICILGTFV+VIGLAVMEPSA+GEKANPFATPLEILPEWYFFPTFNLLRVLPNKLLGVLAMA+VPAGLITVPFIENVNKFQNPFRRPVASTVFL+GTF+AIWLGIGACLPI+KA+TLGLF Sbjct: 1 MSILKKPDLTDPKLRAKLAKGMGHNYYGEPAWPNDIFYMFPICILGTFVIVIGLAVMEPSAIGEKANPFATPLEILPEWYFFPTFNLLRVLPNKLLGVLAMASVPAGLITVPFIENVNKFQNPFRRPVASTVFLIGTFIAIWLGIGACLPINKALTLGLF 160
BLAST of mRNA_L-elsbetiae_contig10.25.1 vs. uniprot
Match: A0A7U0KT28_OLILU (Cytochrome b6-f complex subunit 4 n=1 Tax=Olisthodiscus luteus TaxID=83000 RepID=A0A7U0KT28_OLILU) HSP 1 Score: 300 bits (768), Expect = 9.430e-103 Identity = 138/160 (86.25%), Postives = 154/160 (96.25%), Query Frame = 1 Query: 1 MSILKKPDLTDPKLRAKLAKGMGHNYYGEPAWPNDIFYMFPICILGTFVLVIGLAVMEPSALGEKANPFATPLEILPEWYFFPTFNLLRVLPNKLLGVLAMAAVPAGLITVPFIENVNKFQNPFRRPVASTVFLVGTFVAIWLGIGACLPISKAITLGLF 480 MSI+KKPDL+DPKLRAKLAKGMGHNYYGEPAWPND+ Y+FP+CILGTF ++IGLA++EPSALGEKA+PFATPLEILPEWYFFPTFN+LRVLPNKLLGVLAMAAVPAGLITVPFIENVNKFQNPFRRP+AS VFL+GT +AIWLGIGA +PI KA+TLGLF Sbjct: 1 MSIIKKPDLSDPKLRAKLAKGMGHNYYGEPAWPNDLLYIFPVCILGTFSILIGLAILEPSALGEKADPFATPLEILPEWYFFPTFNILRVLPNKLLGVLAMAAVPAGLITVPFIENVNKFQNPFRRPIASIVFLLGTVIAIWLGIGATMPIDKALTLGLF 160
BLAST of mRNA_L-elsbetiae_contig10.25.1 vs. uniprot
Match: B2XTC2_HETAK (Cytochrome b6-f complex subunit 4 n=4 Tax=Ochrophyta TaxID=2696291 RepID=B2XTC2_HETAK) HSP 1 Score: 300 bits (767), Expect = 1.340e-102 Identity = 139/160 (86.88%), Postives = 152/160 (95.00%), Query Frame = 1 Query: 1 MSILKKPDLTDPKLRAKLAKGMGHNYYGEPAWPNDIFYMFPICILGTFVLVIGLAVMEPSALGEKANPFATPLEILPEWYFFPTFNLLRVLPNKLLGVLAMAAVPAGLITVPFIENVNKFQNPFRRPVASTVFLVGTFVAIWLGIGACLPISKAITLGLF 480 MS++KKPDLTDPKLRAKLAKGMGHNYYGEPAWPND+ Y+FP+ ILGTF +V GLAV+EPSALGE ANPFATPLEILPEWYFFPTFNLLRVLPNKLLGVL+MAAVP GLITVPFIEN+NKFQNPFRRP+ASTVFL GT VAIWLGIGACLPI++A+TLGLF Sbjct: 1 MSVIKKPDLTDPKLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTFSIVTGLAVLEPSALGEPANPFATPLEILPEWYFFPTFNLLRVLPNKLLGVLSMAAVPLGLITVPFIENINKFQNPFRRPIASTVFLFGTVVAIWLGIGACLPINQAVTLGLF 160
BLAST of mRNA_L-elsbetiae_contig10.25.1 vs. uniprot
Match: A0A516ZA44_9STRA (Cytochrome b6-f complex subunit 4 n=2 Tax=Dictyochophyceae TaxID=39119 RepID=A0A516ZA44_9STRA) HSP 1 Score: 295 bits (754), Expect = 1.290e-100 Identity = 137/160 (85.62%), Postives = 149/160 (93.12%), Query Frame = 1 Query: 1 MSILKKPDLTDPKLRAKLAKGMGHNYYGEPAWPNDIFYMFPICILGTFVLVIGLAVMEPSALGEKANPFATPLEILPEWYFFPTFNLLRVLPNKLLGVLAMAAVPAGLITVPFIENVNKFQNPFRRPVASTVFLVGTFVAIWLGIGACLPISKAITLGLF 480 MS++KKPDLTDPKLRAKLAKGMGHNYYGEPAWPND+ Y+FP+ ILGTF ++IGLAV+EPSALGEKA+PFATPLEILPEWYFFPTFNLLRVLPNKLLGV+AMAAVPAGLITVPFIENVNKFQNPFRRP+A VFL GT AIW GIGACLPI A+TLGLF Sbjct: 1 MSVIKKPDLTDPKLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTFAILIGLAVLEPSALGEKADPFATPLEILPEWYFFPTFNLLRVLPNKLLGVIAMAAVPAGLITVPFIENVNKFQNPFRRPLAMAVFLFGTAFAIWFGIGACLPIKDAVTLGLF 160
BLAST of mRNA_L-elsbetiae_contig10.25.1 vs. uniprot
Match: A0A0D3M5D2_9STRA (Cytochrome b6-f complex subunit 4 n=17 Tax=Eustigmatophyceae TaxID=5747 RepID=A0A0D3M5D2_9STRA) HSP 1 Score: 293 bits (749), Expect = 7.440e-100 Identity = 133/160 (83.12%), Postives = 150/160 (93.75%), Query Frame = 1 Query: 1 MSILKKPDLTDPKLRAKLAKGMGHNYYGEPAWPNDIFYMFPICILGTFVLVIGLAVMEPSALGEKANPFATPLEILPEWYFFPTFNLLRVLPNKLLGVLAMAAVPAGLITVPFIENVNKFQNPFRRPVASTVFLVGTFVAIWLGIGACLPISKAITLGLF 480 MS++KKPDLT+P LRAKLAKGMGHNYYGEPAWPND+ Y+FP+ ILGTF LVIGL+ +EPSA+GEKANPFATPLEILPEWYFFPTFNLLRVLPNKLLGV+AMAAVPAGL+TVPFIEN+N FQNPFRRP+AS +FL+GT AIW GIGAC+PISKA+TLGLF Sbjct: 1 MSVIKKPDLTNPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTFALVIGLSTLEPSAIGEKANPFATPLEILPEWYFFPTFNLLRVLPNKLLGVIAMAAVPAGLLTVPFIENINTFQNPFRRPIASFMFLIGTVFAIWFGIGACMPISKAVTLGLF 160
BLAST of mRNA_L-elsbetiae_contig10.25.1 vs. uniprot
Match: A0A1X9PVG8_9RHOD (Cytochrome b6-f complex subunit 4 n=1 Tax=Bulboplastis apyrenoidosa TaxID=1070855 RepID=A0A1X9PVG8_9RHOD) HSP 1 Score: 293 bits (749), Expect = 7.440e-100 Identity = 135/160 (84.38%), Postives = 148/160 (92.50%), Query Frame = 1 Query: 1 MSILKKPDLTDPKLRAKLAKGMGHNYYGEPAWPNDIFYMFPICILGTFVLVIGLAVMEPSALGEKANPFATPLEILPEWYFFPTFNLLRVLPNKLLGVLAMAAVPAGLITVPFIENVNKFQNPFRRPVASTVFLVGTFVAIWLGIGACLPISKAITLGLF 480 MS+LKKPDLTDPKLRAKLAKGMGHNYYGEPAWPND+ YMFP+CILGT +GLAVMEPSALGE +NPFATPLEILPEWYFFPTFNLLRV+PNKLLGVL+MAAVPAGLITVPF+ENVNKFQNPFRRP+A V+L GT +IWLGIGA LPI+KA+TLGLF Sbjct: 1 MSVLKKPDLTDPKLRAKLAKGMGHNYYGEPAWPNDLLYMFPVCILGTIACCVGLAVMEPSALGEPSNPFATPLEILPEWYFFPTFNLLRVIPNKLLGVLSMAAVPAGLITVPFLENVNKFQNPFRRPLAMAVYLTGTVTSIWLGIGATLPINKALTLGLF 160
BLAST of mRNA_L-elsbetiae_contig10.25.1 vs. uniprot
Match: A0A1C9CCJ2_9RHOD (Cytochrome b6-f complex subunit 4 n=7 Tax=Rhodophyta TaxID=2763 RepID=A0A1C9CCJ2_9RHOD) HSP 1 Score: 290 bits (741), Expect = 1.230e-98 Identity = 137/160 (85.62%), Postives = 148/160 (92.50%), Query Frame = 1 Query: 1 MSILKKPDLTDPKLRAKLAKGMGHNYYGEPAWPNDIFYMFPICILGTFVLVIGLAVMEPSALGEKANPFATPLEILPEWYFFPTFNLLRVLPNKLLGVLAMAAVPAGLITVPFIENVNKFQNPFRRPVASTVFLVGTFVAIWLGIGACLPISKAITLGLF 480 MS+LKKPDLTDPKLRAKLAKGMGHNYYGEPAWPND+ Y FPI ILGT +IGLA++EPSALGEK++PFATPLEILPEWY FPTFNLLRV+PNKL+GVL+MAAVPAGLI VPFIENVNKFQNPFRRPVASTVFLVGT AIWLGIGA PIS+AITLGLF Sbjct: 1 MSVLKKPDLTDPKLRAKLAKGMGHNYYGEPAWPNDLLYTFPIVILGTIACLIGLAILEPSALGEKSDPFATPLEILPEWYLFPTFNLLRVIPNKLIGVLSMAAVPAGLIAVPFIENVNKFQNPFRRPVASTVFLVGTVAAIWLGIGATKPISEAITLGLF 160
BLAST of mRNA_L-elsbetiae_contig10.25.1 vs. uniprot
Match: PETD_PORPU (Cytochrome b6-f complex subunit 4 n=14 Tax=Bangiaceae TaxID=31345 RepID=PETD_PORPU) HSP 1 Score: 289 bits (740), Expect = 1.750e-98 Identity = 132/160 (82.50%), Postives = 149/160 (93.12%), Query Frame = 1 Query: 1 MSILKKPDLTDPKLRAKLAKGMGHNYYGEPAWPNDIFYMFPICILGTFVLVIGLAVMEPSALGEKANPFATPLEILPEWYFFPTFNLLRVLPNKLLGVLAMAAVPAGLITVPFIENVNKFQNPFRRPVASTVFLVGTFVAIWLGIGACLPISKAITLGLF 480 MSILKKPDLTDPKLRAKLAKGMGHNYYGEPAWPND+ Y+FP+ ILGT IGLA++EPS+LGEK+NPFATPLEILPEWYFFPTFNLLRV+PNKLLGVL+MAAVPAGL+TVPFIENVNKFQNPFRRP+A+T+FL+ T + IWLGIGA +PI+ AITLGLF Sbjct: 1 MSILKKPDLTDPKLRAKLAKGMGHNYYGEPAWPNDLLYVFPVVILGTIACSIGLAILEPSSLGEKSNPFATPLEILPEWYFFPTFNLLRVIPNKLLGVLSMAAVPAGLLTVPFIENVNKFQNPFRRPIATTIFLISTVITIWLGIGATMPINNAITLGLF 160
BLAST of mRNA_L-elsbetiae_contig10.25.1 vs. uniprot
Match: M1K3S0_DIALT (Cytochrome b6-f complex subunit 4 n=2 Tax=Pavlovaceae TaxID=418969 RepID=M1K3S0_DIALT) HSP 1 Score: 288 bits (737), Expect = 5.030e-98 Identity = 131/160 (81.88%), Postives = 151/160 (94.38%), Query Frame = 1 Query: 1 MSILKKPDLTDPKLRAKLAKGMGHNYYGEPAWPNDIFYMFPICILGTFVLVIGLAVMEPSALGEKANPFATPLEILPEWYFFPTFNLLRVLPNKLLGVLAMAAVPAGLITVPFIENVNKFQNPFRRPVASTVFLVGTFVAIWLGIGACLPISKAITLGLF 480 MSILKKPDLTD KLRAKLAKGMGHNYYGEPAWPND+ Y+FP+ ILGT ++GL+V+EPS+LGEKA+PFATPLEILPEWYFFPTFNLLRV+PNKLLGVL+MAAVPAGLITVPF+ENVNKFQNPFRRP+AS F++GTF+AIWLGIGA +PI++A+TLGLF Sbjct: 1 MSILKKPDLTDAKLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACIVGLSVLEPSSLGEKADPFATPLEILPEWYFFPTFNLLRVIPNKLLGVLSMAAVPAGLITVPFLENVNKFQNPFRRPIASLTFVLGTFIAIWLGIGATMPINQALTLGLF 160
BLAST of mRNA_L-elsbetiae_contig10.25.1 vs. uniprot
Match: A0A1C9C7T5_RHOPU (Cytochrome b6-f complex subunit 4 n=54 Tax=Florideophyceae TaxID=2806 RepID=A0A1C9C7T5_RHOPU) HSP 1 Score: 288 bits (736), Expect = 7.140e-98 Identity = 129/160 (80.62%), Postives = 151/160 (94.38%), Query Frame = 1 Query: 1 MSILKKPDLTDPKLRAKLAKGMGHNYYGEPAWPNDIFYMFPICILGTFVLVIGLAVMEPSALGEKANPFATPLEILPEWYFFPTFNLLRVLPNKLLGVLAMAAVPAGLITVPFIENVNKFQNPFRRPVASTVFLVGTFVAIWLGIGACLPISKAITLGLF 480 MSI+KKPDLTDPKLRAKLAKGMGH+YYGEPAWPND+ YMFP+ ILGT +GL+++EPS +GE ANPFATPLEILPEWYFFPTFNLLRV+PNKL+GVL+MA+VPAGLITVPFIE++NKFQNPFRRP+A+TVFL+GTF++IWLGIGA +P+SKAITLGLF Sbjct: 1 MSIIKKPDLTDPKLRAKLAKGMGHHYYGEPAWPNDLLYMFPVVILGTIACDVGLSILEPSVIGEIANPFATPLEILPEWYFFPTFNLLRVIPNKLIGVLSMASVPAGLITVPFIESINKFQNPFRRPIATTVFLIGTFISIWLGIGATMPLSKAITLGLF 160 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10.25.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10.25.1 >prot_L-elsbetiae_contig10.25.1 ID=prot_L-elsbetiae_contig10.25.1|Name=mRNA_L-elsbetiae_contig10.25.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=161bp MSILKKPDLTDPKLRAKLAKGMGHNYYGEPAWPNDIFYMFPICILGTFVLback to top mRNA from alignment at L-elsbetiae_contig10:45661..46143+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10.25.1 ID=mRNA_L-elsbetiae_contig10.25.1|Name=mRNA_L-elsbetiae_contig10.25.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=483bp|location=Sequence derived from alignment at L-elsbetiae_contig10:45661..46143+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10:45661..46143+ >mRNA_L-elsbetiae_contig10.25.1 ID=mRNA_L-elsbetiae_contig10.25.1|Name=mRNA_L-elsbetiae_contig10.25.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=966bp|location=Sequence derived from alignment at L-elsbetiae_contig10:45661..46143+ (Laminarionema elsbetiae ELsaHSoW15)back to top |