mRNA_L-elsbetiae_contig1320.2500.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1320.2500.1
Unique NamemRNA_L-elsbetiae_contig1320.2500.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1320.2500.1 vs. uniprot
Match: D7G271_ECTSI (PCI domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G271_ECTSI)

HSP 1 Score: 741 bits (1913), Expect = 3.510e-262
Identity = 412/524 (78.63%), Postives = 430/524 (82.06%), Query Frame = 1
Query:    1 MVDVDTKDATAAKAAADNK-DAAPVPTSIKVEDIVRNIELIVKAVESNTARLTTRAISRNTPIRHRVQADVLCEALAQLLPDDCPHKAELTKLLSKLPSEAVVEP--PLAEPMEVDSEAAKKEGEAXXXXXXXXXXXXXXXXXXXXXXALPEVEVYLSTLALTTLLRHKANADAVAVASKLLERAVSFNRRTLDSLAAKTVFYYSLAFEASGRLPEARPRLLALHRTCCLRHDEIGQATTLNLLLRNLLSQNLLDQAYKLASKTNFPEGCSNNQFCRYLYYMGRIHALQLDYTDAYTKLMQSSRKVPQNTAMGFQRAAQKLVIIVQLLLGEVPERSVFNQKGFVVSLRPYLALTQAVRQGDLVEFNRIVKEHEAIFRADKTFTLIQRLAHNVIKTGLRKINSSYSRISLQDLCEKVKLETVQSAEFVCSKAVRDGVIDAVIDHENGWIQSQDVVDVYATDEPQQAFHKRITFCLDVHNEAVRAMRYPPNAYKKELDAARPSLEDDKTDEELAKEIEDEMNEEGG 1563
            M DVD KDA+AA  AA  K + A VP SIKVEDIVRN ELIVK V+ +TARLTTRAISRNTPIR RVQADVLCEALA+LLPDDCP KAELT+LL+KLPSEAV EP  P  E MEVDSEAAKKE  A     XXXXXXX           LPEVEVYLSTL LTTLLRHKANA                                             RPRLL LHRTCCLRHDEIGQATTLNLLLRNLLSQNLLDQAYKLASKTNFPE CSNNQFCRYLYYMGRIHALQLDYTDAYTKLMQSSRKV QNTAMGFQRAAQKLVIIVQLLLGEVPERSVFNQKGFVVSL+PYLALTQAVRQGDLVEFNRIV EHE+ FRADKT+TLIQRLAHNVIKTGLRKINSSYSR+SLQDLCEKVKLETVQSAEFVCSKA+RDGVIDAVIDH+NGWIQS+DVVDVYATDEPQQAFHKRITFCLDVHNEAVRAMRYPPNAYK+EL  +RP +ED+KTDEELAKEIEDEMNEE G
Sbjct:    1 MTDVDMKDASAAATAAGEKGEVAAVPKSIKVEDIVRNAELIVKGVQGDTARLTTRAISRNTPIRRRVQADVLCEALAKLLPDDCPDKAELTRLLAKLPSEAVAEPETPTTEAMEVDSEAAKKEAAAAATAEXXXXXXXEEALASVVAAKLPEVEVYLSTLVLTTLLRHKANA---------------------------------------------RPRLLGLHRTCCLRHDEIGQATTLNLLLRNLLSQNLLDQAYKLASKTNFPESCSNNQFCRYLYYMGRIHALQLDYTDAYTKLMQSSRKVSQNTAMGFQRAAQKLVIIVQLLLGEVPERSVFNQKGFVVSLKPYLALTQAVRQGDLVEFNRIVGEHESTFRADKTYTLIQRLAHNVIKTGLRKINSSYSRVSLQDLCEKVKLETVQSAEFVCSKAIRDGVIDAVIDHKNGWIQSRDVVDVYATDEPQQAFHKRITFCLDVHNEAVRAMRYPPNAYKQELAKSRPGMEDEKTDEELAKEIEDEMNEEDG 479          
BLAST of mRNA_L-elsbetiae_contig1320.2500.1 vs. uniprot
Match: A0A835YND8_9STRA (Proteasome regulatory subunit C-terminal-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YND8_9STRA)

HSP 1 Score: 513 bits (1321), Expect = 8.740e-172
Identity = 300/537 (55.87%), Postives = 370/537 (68.90%), Query Frame = 1
Query:    4 VDVDTKDATAAKAAADNKDAAPVPTS--IKVEDIVRNIELIVKAVESNTARLTTRAISRNTPIRHRVQADVLCEALAQLLPDDCPHKAELTKLLSKLPS---EAVVEPPL-AEPMEVDSEAAKKEGEAXXXXXXXXXXXXXXXXXXXXXXALPEVEVYLSTLALTTLLRHKANADAVA-VASKLLERAVSFNRRTLDSLAAKTVFYYSLAFEASGRLPEARPRLLALHRTCCLRHDEIGQATTLNLLLRNLLSQNLLDQAYKLASKTNFPEGCSNNQFCRYLYYMGRIHALQLDYTDAYTKLMQSSRKVPQNTAMGFQRAAQKLVIIVQLLLGEVPERSVFNQKGFVVSLRPYLALTQAVRQGDLVEFNRIVKEHEAIFRADKTFTLIQRLAHNVIKTGLRKINSSYSRISLQDLCEKVKLETVQSAEFVCSKAVRDGVIDAVIDH-ENG-------WIQSQDVVDVYATDEPQQAFHKRITFCLDVHNEAVRAMRYPPNAYKKELDAA-RPSLEDDKTDEELAKEIEDEMNEEGGL 1566
            VD  T  ATAA  +A   D A    +  I + DI RNI  IV+A ESN  RLT RAI   T IR RV   VL EA+   +P+  P +A++ + L  LP+   EA  EPP  A  MEV+ E   KE +                       A PEVE Y+  L L  +LR      A+  +A+ LL R  SFNRRTLD LA+K +FY SLA E +GR  + R  LLALHRTCCLRHDEIGQAT LNLLLR +LSQNLLDQAYKLASKTNFPE CSNNQFCRYLYYMGRI ALQLDYTDA+ KL Q +RK P NTA+ F+ A Q+L +IVQLLLGEVPER+VFN  G   +L PYL LTQAVR GDLVEFN  V++++A F+AD+T+TLIQRLAHNV+K GLRK+N +YSRI+L D+  KV+L++   AEF+C++A+RDGVIDA I+  E G        ++S++  D+YATDEPQ+AFH+R+ FCLDVHN AVRAMRYP +AYK++L+ A R    +DKT+EELAKEI ++M+E+G L
Sbjct:    3 VDKVTAAATAAPVSAPAADDATPKAAAPITLADIKRNIGFIVRATESNQHRLTLRAIRNTTAIRTRVAPAVLKEAVMAYVPETHPARAQMLETLDALPAPAVEAAAEPPSEAASMEVEGE---KEKDPAAPEGAETPEPAKEKWEEKLSLAAPEVETYVCMLVLAVVLRSGGETGALLPLANALLARVTSFNRRTLDHLASKVLFYCSLAHERAGRASDMRAPLLALHRTCCLRHDEIGQATALNLLLRQMLSQNLLDQAYKLASKTNFPETCSNNQFCRYLYYMGRIGALQLDYTDAHAKLTQCARKAPANTALAFRTAVQRLTVIVQLLLGEVPERAVFNAAGMRAALAPYLQLTQAVRLGDLVEFNAAVQQNKATFQADRTYTLIQRLAHNVVKAGLRKVNVAYSRIALADVRAKVRLDSDAGAEFICARAIRDGVIDASIEPVEKGAGGGAARCLRSREQGDLYATDEPQRAFHRRVAFCLDVHNGAVRAMRYPEDAYKRDLERAKRKGALEDKTEEELAKEIAEDMDEDGAL 536          
BLAST of mRNA_L-elsbetiae_contig1320.2500.1 vs. uniprot
Match: A0A1V9ZW09_9STRA (26S proteasome non-ATPase regulatory subunit 3 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZW09_9STRA)

HSP 1 Score: 480 bits (1236), Expect = 8.020e-160
Identity = 261/497 (52.52%), Postives = 335/497 (67.40%), Query Frame = 1
Query:   91 EDIVRNIELIVKAVESNTARLTTRAISRNTPIRHRVQADVLCEALAQLLPDDCPHKAELTKLLSKLPSEAVVE--------PPLAEPMEVDSEAAKKEGEAXXXXXXXXXXXXXXXXXXXXXXALPEVEVYLSTLALTTLLRHKANADAVAVASKLLERAVSFNRRTLDSLAAKTVFYYSLAFEASGR-LPEARPRLLALHRTCCLRHDEIGQATTLNLLLRNLLSQNLLDQAYKLASKTNFPEGCSNNQFCRYLYYMGRIHALQLDYTDAYTKLMQSSRKVPQNTAMGFQRAAQKLVIIVQLLLGEVPERSVFNQKGFVVSLRPYLALTQAVRQGDLVEFNRIVKEHEAIFRADKTFTLIQRLAHNVIKTGLRKINSSYSRISLQDLCEKVKLETVQSAEFVCSKAVRDGVIDAVIDHENGWIQSQDVVDVYATDEPQQAFHKRITFCLDVHNEAVRAMRYPPNAYKKELDAARPSLEDDKTDEELAKEIEDEMNE 1554
            +++ +N+ LI K V S+     TR       IR  + +  L  A+ ++L +D   +A L + L+ +P EA  +         P    +E D+    +  E                        L EVEVYLS L +  LL+ +   DA  +A ++  R   FNRRTLD  AA+ + Y++ AFE  G  +   RP LL  HRT CLR DEIGQAT LNLLLRN L +NL DQAYKL SKT FPE  SNNQF RYLYY+G++HA+QL+Y+D+YTKLMQS RK PQNTA+GF+R   KL IIVQLL+GEVPERS+FNQ     +L PYL LT AVR G+L +F  ++ +H   F+ADKT TLI RL HNVIKTGLRKIN+SYS+I   D+C K+ L+T Q+AEFVC+KA+RDGVIDAVIDH++GW+QS++ +DVYAT EPQQAFHKRITFCLDVHNEAV+AMRYPP AYKK+L++A   LE +K ++ELAKEIE+E++E
Sbjct:    6 KELKKNVGLIEKVVASSNKEKLTRVFRTTAHIRRELTSIELTRAIQEILAEDNEARATLLQFLALIPPEAEQDFDMNAGEDDPTVNEVEKDANVHMERSE------------------------LIEVEVYLSLLVIALLLKSQLGQDAQRLADQVRGRCAQFNRRTLDIFAARVMTYFAYAFERYGDGITAIRPLLLEAHRTACLRCDEIGQATLLNLLLRNYLHENLYDQAYKLVSKTTFPEAVSNNQFVRYLYYVGKVHAVQLEYSDSYTKLMQSIRKAPQNTAVGFRRTVYKLAIIVQLLMGEVPERSIFNQPELKTALAPYLQLTNAVRVGNLEDFTAVLAQHAEGFKADKTHTLILRLRHNVIKTGLRKINTSYSKILFSDICAKLALDTPQNAEFVCAKAIRDGVIDAVIDHKHGWMQSKETIDVYATTEPQQAFHKRITFCLDVHNEAVKAMRYPPGAYKKDLESAEERLEREKQEDELAKEIEEELDE 478          
BLAST of mRNA_L-elsbetiae_contig1320.2500.1 vs. uniprot
Match: A0A024U3G0_9STRA (PCI domain-containing protein n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A024U3G0_9STRA)

HSP 1 Score: 476 bits (1226), Expect = 2.740e-158
Identity = 257/489 (52.56%), Postives = 338/489 (69.12%), Query Frame = 1
Query:   91 EDIVRNIELIVKAVESNTARLTTRAISRNTPIRHRVQADVLCEALAQLLPDDCPHKAELTKLLSKLPSEAVVEPPLAEPMEVDSEAAKKEGEAXXXXXXXXXXXXXXXXXXXXXXALPEVEVYLSTLALTTLLRHKANADAVAVASKLLERAVSFNRRTLDSLAAKTVFYYSLAFEASG-RLPEARPRLLALHRTCCLRHDEIGQATTLNLLLRNLLSQNLLDQAYKLASKTNFPEGCSNNQFCRYLYYMGRIHALQLDYTDAYTKLMQSSRKVPQNTAMGFQRAAQKLVIIVQLLLGEVPERSVFNQKGFVVSLRPYLALTQAVRQGDLVEFNRIVKEHEAIFRADKTFTLIQRLAHNVIKTGLRKINSSYSRISLQDLCEKVKLETVQSAEFVCSKAVRDGVIDAVIDHENGWIQSQDVVDVYATDEPQQAFHKRITFCLDVHNEAVRAMRYPPNAYKKELDAARPSLEDDKTDEELAKEIEDEMNE 1554
            +++ +N+ +I KAV +N      R     T +R  + +  L  A+ ++L +D   ++ L K +S      +V+P  +E  +VD  A + +                          L EVE+YLS L ++ L + +   ++ A+   +  R+  FNRR+LD  A++ + YY+ A E  G      RP LLA HRT CLR DEIGQAT LNLLLRN L +NL DQA+KL SKT FPE  SNNQF RYLYY+G+IHA+QLDYTD+YTKLMQS RK PQNTA+GF+R   KL IIVQLL+GEVPERS+FNQ  F ++L PYL LT AVR G+L +F+ ++ +H   F++DKT+TLI RL HNVIKTGLRKIN+SYS+I   D+C K+ L+T Q+AEFV +KA++DGVIDAVIDH+NGW+QS++ VDVY T+EPQQAFHKRITFCLDVHNEAV+AMRYPP AYKK+L++A   LE +K +EELAKEIEDE++E
Sbjct:    6 KELKKNLSVIEKAVNANQKEKLARVFRTTTSVRRGITSVELKRAIEEVLAEDNESRSVLIKYVS------LVKPDESE--DVDMNAGETD------PVVGDVEKDDDSNVHLDRSDLIEVEIYLSLLVISKLFKAQLGCESQALTDFVRARSEEFNRRSLDIFASRALTYYAYAHERFGSNYAGIRPVLLAAHRTACLRSDEIGQATLLNLLLRNYLHENLYDQAFKLVSKTTFPEAVSNNQFVRYLYYVGKIHAVQLDYTDSYTKLMQSIRKAPQNTAVGFRRTVHKLAIIVQLLMGEVPERSIFNQDEFKIALEPYLKLTNAVRLGNLEDFSSVLAQHADTFKSDKTYTLILRLRHNVIKTGLRKINTSYSKIRFTDICAKLALDTPQNAEFVVAKAIKDGVIDAVIDHKNGWMQSKETVDVYVTNEPQQAFHKRITFCLDVHNEAVKAMRYPPGAYKKDLESAEERLEREKQEEELAKEIEDELDE 480          
BLAST of mRNA_L-elsbetiae_contig1320.2500.1 vs. uniprot
Match: A0A067CGI9_SAPPC (PCI domain-containing protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CGI9_SAPPC)

HSP 1 Score: 475 bits (1222), Expect = 1.020e-157
Identity = 260/488 (53.28%), Postives = 332/488 (68.03%), Query Frame = 1
Query:   94 DIVRNIELIVKAVESNTARLTTRAISRNTPIRHRVQADVLCEALAQLLPDDCPHKAELTKLLSKLPSEAVVEPPLAEPMEVDSEAAKKEGEAXXXXXXXXXXXXXXXXXXXXXXALPEVEVYLSTLALTTLLRHKANADAVAVASKLLERAVSFNRRTLDSLAAKTVFYYSLAFEASGRLPEA-RPRLLALHRTCCLRHDEIGQATTLNLLLRNLLSQNLLDQAYKLASKTNFPEGCSNNQFCRYLYYMGRIHALQLDYTDAYTKLMQSSRKVPQNTAMGFQRAAQKLVIIVQLLLGEVPERSVFNQKGFVVSLRPYLALTQAVRQGDLVEFNRIVKEHEAIFRADKTFTLIQRLAHNVIKTGLRKINSSYSRISLQDLCEKVKLETVQSAEFVCSKAVRDGVIDAVIDHENGWIQSQDVVDVYATDEPQQAFHKRITFCLDVHNEAVRAMRYPPNAYKKELDAARPSLEDDKTDEELAKEIEDEMNE 1554
            ++ +N+ LI K V SN      R     + IR  +    L  A+ ++L +D   ++ L K +       +V+P  A+  +VD  A + +                          L EVE YLS L +  LL+ +  A+A A A  + +R + FNRRTLD  AA+ + Y++ AFE  G    A RP LL  HRT CLR DEIGQAT LNLLLRN L +NL +QAYKL SKT FPE  SNNQF RYLYY+G+IHA+QL+YTD+Y KLMQS RK PQNTA+GF+R   KL IIVQLL+GEVPERS+FNQ     +L PYL LT AVR G+L +F  ++ +   +F+ADKT TLI RL HNVIKTGLRKIN+SYS+I   D+C K+ L+T Q+AEFVC+KA+RDGVIDAVIDH++GW+QS++ VDVYAT EPQQAFHKRITFCLDVHNEAV+AMRYPP AYKK+L++A   LE +K ++ELAKEIE+E++E
Sbjct:    7 ELKKNVALIEKVVASNNKEKLARVFRTTSGIRRGLTPAELTRAVTEILAEDNEIRSSLLKFIG------LVKPDAAD--DVDMTAGEDD--------PAVGDVEKDASVHMERSELIEVETYLSLLVIALLLKSQLGAEAQACADLVRQRCMQFNRRTLDLFAARVMTYFAYAFERYGEGYTAIRPLLLTAHRTACLRCDEIGQATLLNLLLRNYLHENLYEQAYKLVSKTTFPEAVSNNQFVRYLYYVGKIHAVQLEYTDSYNKLMQSIRKAPQNTAIGFRRTVYKLAIIVQLLMGEVPERSIFNQAELKTALTPYLQLTNAVRVGNLEDFTAVLNQFADVFKADKTHTLILRLRHNVIKTGLRKINTSYSKILFSDICAKLALDTPQNAEFVCAKAIRDGVIDAVIDHKHGWMQSKETVDVYATTEPQQAFHKRITFCLDVHNEAVKAMRYPPGAYKKDLESAEERLEREKQEDELAKEIEEELDE 478          
BLAST of mRNA_L-elsbetiae_contig1320.2500.1 vs. uniprot
Match: A0A6G0XBS9_9STRA (PCI domain-containing protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A6G0XBS9_9STRA)

HSP 1 Score: 474 bits (1221), Expect = 1.440e-157
Identity = 256/489 (52.35%), Postives = 335/489 (68.51%), Query Frame = 1
Query:   91 EDIVRNIELIVKAVESNTARLTTRAISRNTPIRHRVQADVLCEALAQLLPDDCPHKAELTKLLSKLPSEAVVEPPLAEPMEVDSEAAKKEGEAXXXXXXXXXXXXXXXXXXXXXXALPEVEVYLSTLALTTLLRHKANADAVAVASKLLERAVSFNRRTLDSLAAKTVFYYSLAFEASGRLPEA-RPRLLALHRTCCLRHDEIGQATTLNLLLRNLLSQNLLDQAYKLASKTNFPEGCSNNQFCRYLYYMGRIHALQLDYTDAYTKLMQSSRKVPQNTAMGFQRAAQKLVIIVQLLLGEVPERSVFNQKGFVVSLRPYLALTQAVRQGDLVEFNRIVKEHEAIFRADKTFTLIQRLAHNVIKTGLRKINSSYSRISLQDLCEKVKLETVQSAEFVCSKAVRDGVIDAVIDHENGWIQSQDVVDVYATDEPQQAFHKRITFCLDVHNEAVRAMRYPPNAYKKELDAARPSLEDDKTDEELAKEIEDEMNE 1554
            +++ +N+ +I K V +N     +R     + +R  + A  L  A+ ++L +D   +A L   +S      +++P  +E ++++++                               L EVE+YLS L ++ LL+ +   ++ A    +  R   FNRR+LD  A++   YY+ A E  G+   A RP LL  HRT CLR DEIGQAT LNLLLRN L +NL DQAYKL SKT FPE  SNNQF RYLYY+G+IHA+QLDYTD+YTKLMQS RK PQNTA+GF+R   KL IIVQLL+GEVPERS+FNQ G   +L PYL LT AVR G+L +FN ++ ++   F+ADKT+TLI RL HNVIKTGLRK N+SYS+I   D+C K+ L+T Q+AEFVC+KA++DGVIDAVIDH+NGW+QS++ VDVY T+EPQQAFHKRITFCLDVHNEAV+AMRYPP AYKK+L++A   LE +K +EELAKEIEDEM+E
Sbjct:    6 KELKKNLSVIEKVVSANQKEKLSRVFRTTSVVRQSLSAAELKRAIEEVLAEDNESRALLLTYVS------LIKPDPSEDVDMNADETDP----------TVNDVEKDTNVHLDRSDLIEVEIYLSLLVISLLLKAQLGQESQAFTDAVRIRCGQFNRRSLDLFASRVYTYYAYAHERFGQSYAAIRPVLLVAHRTACLRSDEIGQATLLNLLLRNYLHENLYDQAYKLVSKTTFPESVSNNQFVRYLYYVGKIHAVQLDYTDSYTKLMQSIRKAPQNTAVGFRRTVYKLAIIVQLLMGEVPERSIFNQDGLKTALIPYLQLTNAVRLGNLEDFNTVLTQNADAFKADKTYTLILRLRHNVIKTGLRKTNTSYSKIRFTDICTKLALDTPQNAEFVCAKAIKDGVIDAVIDHKNGWMQSKETVDVYVTNEPQQAFHKRITFCLDVHNEAVKAMRYPPGAYKKDLESAEERLEREKQEEELAKEIEDEMDE 478          
BLAST of mRNA_L-elsbetiae_contig1320.2500.1 vs. uniprot
Match: A0A6A4BAK4_9STRA (26S proteasome non-ATPase regulatory subunit 3 (Fragment) n=8 Tax=Phytophthora TaxID=4783 RepID=A0A6A4BAK4_9STRA)

HSP 1 Score: 473 bits (1217), Expect = 2.980e-156
Identity = 260/489 (53.17%), Postives = 329/489 (67.28%), Query Frame = 1
Query:   91 EDIVRNIELIVKAVESNTARLTTRAISRNTPIRHRVQADVLCEALAQLLPDDCPHKAELTKLLSKLPSEAVVEPPLAEPMEVDSEAAKKEGEAXXXXXXXXXXXXXXXXXXXXXXALPEVEVYLSTLALTTLLRHKANADAVAVASKLLERAVSFNRRTLDSLAAKTVFYYSLAFEASGR-LPEARPRLLALHRTCCLRHDEIGQATTLNLLLRNLLSQNLLDQAYKLASKTNFPEGCSNNQFCRYLYYMGRIHALQLDYTDAYTKLMQSSRKVPQNTAMGFQRAAQKLVIIVQLLLGEVPERSVFNQKGFVVSLRPYLALTQAVRQGDLVEFNRIVKEHEAIFRADKTFTLIQRLAHNVIKTGLRKINSSYSRISLQDLCEKVKLETVQSAEFVCSKAVRDGVIDAVIDHENGWIQSQDVVDVYATDEPQQAFHKRITFCLDVHNEAVRAMRYPPNAYKKELDAARPSLEDDKTDEELAKEIEDEMNE 1554
            E++ R I L+  AV +N      R +   + +R  + A  L  A+AQLLP     K  L  LL+K+ ++A       +P +V    A  E EA                       L EVE+YL    L  L++ +   +A+  A K++ R   FNRRTLD L A+   YY+   E  GR LP  R  LL  HRT CLR+DE GQAT +NLLLRN L+ NL +QAYK  SKT FPE  SNNQF RYLYY+G+I A+QL+YT++YTKLMQS RK P NTA GF+R   KL IIVQLL+GEVPERSVFNQ     +L PYL LT AVR G+L +FN ++ +H A+F+AD T+TLI RL HNVIKTGLRKI++SYSRI   D+CEK+ LE  Q+AEFVC+KA+RDGVIDAVIDHENGW+Q ++ V+VY T++PQ AF +RITFCLDVHNEAV+AMRYPP+AYKK+L++A   LE +K +EELAKEIEDEM++
Sbjct:   54 EELKRTITLLETAVRTNAKEKIPRVLRATSKLRKTLSAAQLRLAVAQLLPSQNASKPALLALLAKIEAKAQA----LKPQDVAMTDASSEEEAPAAATLALPVVD-----------LIEVEIYLFLYVLAALVKFRLAQEALDTADKVVARCQQFNRRTLDLLQARAFTYYATIHEQFGRDLPAIRNTLLGAHRTACLRYDEAGQATLINLLLRNYLNDNLYEQAYKFVSKTTFPETVSNNQFVRYLYYVGKIQAVQLEYTESYTKLMQSIRKTPANTAFGFRRTVHKLAIIVQLLMGEVPERSVFNQDELRKALAPYLQLTNAVRVGNLEDFNVVLSQHGAVFKADNTYTLILRLRHNVIKTGLRKISTSYSRILFTDICEKLALEDAQNAEFVCAKAIRDGVIDAVIDHENGWLQLKETVNVYTTNDPQTAFQRRITFCLDVHNEAVKAMRYPPDAYKKDLESAEERLEREKQEEELAKEIEDEMDD 527          
BLAST of mRNA_L-elsbetiae_contig1320.2500.1 vs. uniprot
Match: A0A8K1CTV9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CTV9_PYTOL)

HSP 1 Score: 471 bits (1212), Expect = 9.230e-156
Identity = 255/489 (52.15%), Postives = 331/489 (67.69%), Query Frame = 1
Query:   91 EDIVRNIELIVKAVESNTARLTTRAISRNTPIRHRVQADVLCEALAQLLPDDCPHKAELTKLLSKLPSEAVVEPPLAEPMEVDSEAAKKEGEAXXXXXXXXXXXXXXXXXXXXXXALPEVEVYLSTLALTTLLRHKANADAVAVASKLLERAVSFNRRTLDSLAAKTVFYYSLAFEASGR-LPEARPRLLALHRTCCLRHDEIGQATTLNLLLRNLLSQNLLDQAYKLASKTNFPEGCSNNQFCRYLYYMGRIHALQLDYTDAYTKLMQSSRKVPQNTAMGFQRAAQKLVIIVQLLLGEVPERSVFNQKGFVVSLRPYLALTQAVRQGDLVEFNRIVKEHEAIFRADKTFTLIQRLAHNVIKTGLRKINSSYSRISLQDLCEKVKLETVQSAEFVCSKAVRDGVIDAVIDHENGWIQSQDVVDVYATDEPQQAFHKRITFCLDVHNEAVRAMRYPPNAYKKELDAARPSLEDDKTDEELAKEIEDEMNE 1554
            E++ R I+L+   V++N     +R +   + +R  +    L +A+ Q LPD    K  L  +L K+ +  V      E  ++  E+ +++  A                       L EVEVY    A+  L+++K   DA+   +  L R   FNRRTLDS  AK   YY+   E   + LP  R  LLA HRT CLR+DEIGQAT +NLLLRN L +NL +QAYK  SKT FPE  SNNQF RYLYY+G+I A+QL+YT++YTKLMQS RK PQNTA+GF+R   KL IIVQLL+GEVPER+VFNQ     +L PYL LT AVR G+L +FN ++++H   F+AD T+TLI RL HNVIKTGLRKI++SYSRI+  D+C K+ LE+ Q+AEFVC+KA+RDGVIDAVIDH+NGW+QS++ V+VY T +PQQAF KRI FCLDVHNEAV+AMRYPP+AYKK+L++A   LE +K +EELAKEIEDEM+E
Sbjct:   32 EELKRTIQLLEHIVKTNAKEKISRVLRNTSKLRKTLSVAQLVKAVQQTLPDTNESKTTLLTVLDKIAAN-VNSSVDTEMKDMSEESPEQDASAASPSAPVVLPVVD----------LIEVEVYFFLFAIAALIKYKLVDDAIQTVNYTLARCQQFNRRTLDSFQAKVFTYYATVHEQFSKDLPAIRNTLLAAHRTACLRYDEIGQATLVNLLLRNYLQENLYEQAYKFVSKTTFPESVSNNQFVRYLYYVGKIQAVQLEYTESYTKLMQSIRKAPQNTAVGFRRTVYKLAIIVQLLMGEVPERNVFNQDELRKALAPYLQLTNAVRVGNLEDFNVVLQQHTGAFQADHTYTLILRLRHNVIKTGLRKISTSYSRITFSDICAKLALESAQNAEFVCAKAIRDGVIDAVIDHKNGWLQSKETVNVYTTTDPQQAFQKRIAFCLDVHNEAVKAMRYPPDAYKKDLESAEERLEREKQEEELAKEIEDEMDE 509          
BLAST of mRNA_L-elsbetiae_contig1320.2500.1 vs. uniprot
Match: A0A662X1V9_9STRA (PCI domain-containing protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X1V9_9STRA)

HSP 1 Score: 468 bits (1203), Expect = 2.070e-154
Identity = 258/488 (52.87%), Postives = 326/488 (66.80%), Query Frame = 1
Query:   94 DIVRNIELIVKAVESNTARLTTRAISRNTPIRHRVQADVLCEALAQLLPDDCPHKAELTKLLSKLPSEAVVEPPLAEPMEVDSEAAKKEGEAXXXXXXXXXXXXXXXXXXXXXXALPEVEVYLSTLALTTLLRHKANADAVAVASKLLERAVSFNRRTLDSLAAKTVFYYSLAFEASGR-LPEARPRLLALHRTCCLRHDEIGQATTLNLLLRNLLSQNLLDQAYKLASKTNFPEGCSNNQFCRYLYYMGRIHALQLDYTDAYTKLMQSSRKVPQNTAMGFQRAAQKLVIIVQLLLGEVPERSVFNQKGFVVSLRPYLALTQAVRQGDLVEFNRIVKEHEAIFRADKTFTLIQRLAHNVIKTGLRKINSSYSRISLQDLCEKVKLETVQSAEFVCSKAVRDGVIDAVIDHENGWIQSQDVVDVYATDEPQQAFHKRITFCLDVHNEAVRAMRYPPNAYKKELDAARPSLEDDKTDEELAKEIEDEMNE 1554
            ++ R I L+   V++N      R +   + +R  +    L +A+AQLLPD    K  L  LL ++ ++  V    A+  +V+   A  E +A                       L EVEVYL    L  L+++K  A+A+    K+L R   FNRRTLD   AK   YYS   E  G  L   R  LLA HRT CLR+DEIGQAT +NLLLRN L +NL +Q YK  SKT FPE  SNNQF RYLYY+G+I A+QL+YT++YTKLMQS RK P NTA GF+R   KL IIVQLL+GEVPER+VFNQ     +L PYL LT AVR G+L EFN ++ +H A+F+AD T+TLI RL HNVIKTGLRKI++SYSRI   D+C K+ LE  Q+AEFVC+KA+RDGVIDA+IDHENGW+Q ++ V+VY T++PQ AF KRITFCLDVHNEAV+AMRYPP+AYKK+L++A   LE +K +EE AKEIEDEM+E
Sbjct:   34 ELKRTIVLLETVVKTNAKEKIPRILRTTSKLRKTLSVAQLQQAVAQLLPDQNESKRALLALLDQISAKVAV---AAKTEDVEMTDATPEVDASATTSVAVVLPVVD---------LIEVEVYLFLYVLAALMKYKLTAEALDTVDKVLVRCQQFNRRTLDPFQAKVFSYYSSIHEQFGHDLSAIRNTLLAAHRTSCLRYDEIGQATLVNLLLRNYLQENLYEQGYKFVSKTTFPETVSNNQFVRYLYYVGKIQAVQLEYTESYTKLMQSIRKAPANTAFGFRRTVYKLAIIVQLLMGEVPERNVFNQDELRKALAPYLQLTNAVRVGNLEEFNMVLTQHAAVFKADHTYTLILRLRHNVIKTGLRKISTSYSRILFTDICAKLALEDAQNAEFVCAKAIRDGVIDALIDHENGWLQLKETVNVYTTNDPQTAFQKRITFCLDVHNEAVKAMRYPPDAYKKDLESAEERLEREKQEEEFAKEIEDEMDE 509          
BLAST of mRNA_L-elsbetiae_contig1320.2500.1 vs. uniprot
Match: K3X7P1_GLOUD (PCI domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X7P1_GLOUD)

HSP 1 Score: 467 bits (1201), Expect = 4.730e-154
Identity = 256/505 (50.69%), Postives = 338/505 (66.93%), Query Frame = 1
Query:   52 NKDAAPVPTSIKVEDIVRNIELIVKAVESNTARLTTRAISRNTPIRHRVQADVLCEALAQLLPDDCPHKAELTKLLSKLPS--EAVVEPPLAEPMEVDSEAAKKEGEAXXXXXXXXXXXXXXXXXXXXXXALPEVEVYLSTLALTTLLRHKANADAVAVASKLLERAVSFNRRTLDSLAAKTVFYYSLAFEASGR-LPEARPRLLALHRTCCLRHDEIGQATTLNLLLRNLLSQNLLDQAYKLASKTNFPEGCSNNQFCRYLYYMGRIHALQLDYTDAYTKLMQSSRKVPQNTAMGFQRAAQKLVIIVQLLLGEVPERSVFNQKGFVVSLRPYLALTQAVRQGDLVEFNRIVKEHEAIFRADKTFTLIQRLAHNVIKTGLRKINSSYSRISLQDLCEKVKLETVQSAEFVCSKAVRDGVIDAVIDHENGWIQSQDVVDVYATDEPQQAFHKRITFCLDVHNEAVRAMRYPPNAYKKELDAARPSLEDDKTDEELAKEIEDEMNEE 1557
            +K       ++  E++ R I L+   V++N     +R +   + +R  +    L +A+ Q+LP+    KA L  LL K+ +  +A V+  +      D   +  EG+A                       L EVEVY S   L  L++++   DA+    K+L R+  FNRRTLD+  AK   YY+   E  G  LP  R  LLA HRT CLR+DEIGQAT +NLLLRN L +NL +QAYK  +KT FPE  SNNQF RYL+Y+G+I A+QL+YT++YTKLMQS RK PQNTA+GF+R   KL IIVQLL+GEVPERS+FNQ     +L PYL LT AVR G+L +FN ++ +H A+F+AD T++LI RL HNVIKTGLRKI++SYSRI   D+  K+ LE  Q+AEFVC+KA+RDGVIDAVIDH+NGW+QS++ V+VY T++PQ AF KRITFCLDVHNEAV+ MRYPP+AYKK+L++A   LE +K +EELAKEIEDEM+E+
Sbjct:   19 SKSEVAAEEALVYEELKRMILLLETVVKTNAKEKISRILRNTSKLRKTLSIPQLIQAVNQVLPEKNESKALLLSLLEKIGTKVDATVDTEMT-----DVSESTPEGDAPATTDNAAKEVVVLPVVD-----LIEVEVYFSLYVLAALVKYQLADDALQTVQKVLARSEQFNRRTLDAFQAKLYTYYASIHEQFGHDLPAIRSTLLAAHRTACLRYDEIGQATLVNLLLRNYLHENLYEQAYKFVTKTTFPENASNNQFVRYLFYVGKIQAVQLEYTESYTKLMQSIRKAPQNTAIGFRRTVYKLAIIVQLLMGEVPERSIFNQDDLRKALTPYLQLTNAVRVGNLEDFNTVLTQHAAVFKADHTYSLILRLRHNVIKTGLRKISTSYSRILFSDISAKLALENSQNAEFVCAKAIRDGVIDAVIDHKNGWLQSKETVNVYTTNDPQVAFQKRITFCLDVHNEAVKGMRYPPDAYKKDLESAEERLEREKQEEELAKEIEDEMDED 513          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1320.2500.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G271_ECTSI3.510e-26278.63PCI domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835YND8_9STRA8.740e-17255.87Proteasome regulatory subunit C-terminal-domain-co... [more]
A0A1V9ZW09_9STRA8.020e-16052.5226S proteasome non-ATPase regulatory subunit 3 n=1... [more]
A0A024U3G0_9STRA2.740e-15852.56PCI domain-containing protein n=5 Tax=Aphanomyces ... [more]
A0A067CGI9_SAPPC1.020e-15753.28PCI domain-containing protein n=3 Tax=Saprolegniac... [more]
A0A6G0XBS9_9STRA1.440e-15752.35PCI domain-containing protein n=2 Tax=Aphanomyces ... [more]
A0A6A4BAK4_9STRA2.980e-15653.1726S proteasome non-ATPase regulatory subunit 3 (Fr... [more]
A0A8K1CTV9_PYTOL9.230e-15652.15Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A662X1V9_9STRA2.070e-15452.87PCI domain-containing protein (Fragment) n=2 Tax=N... [more]
K3X7P1_GLOUD4.730e-15450.69PCI domain-containing protein n=1 Tax=Globisporang... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1320contigL-elsbetiae_contig1320:11042..23249 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score746.1
Seed ortholog evalue1.1e-212
Seed eggNOG ortholog2880.D7G271
Preferred namePSMD3
KEGG koko:K03033,ko:K03126
KEGG Pathwayko03022,ko03050,ko05169,map03022,map03050,map05169
KEGG ModuleM00341
Hectar predicted targeting categoryother localisation
GOsGO:0000502,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0005838,GO:0005886,GO:0005911,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006810,GO:0006887,GO:0006955,GO:0007088,GO:0007346,GO:0008150,GO:0008152,GO:0008270,GO:0008541,GO:0009056,GO:0009057,GO:0009506,GO:0009896,GO:0009987,GO:0010498,GO:0010564,GO:0010638,GO:0010965,GO:0012505,GO:0016020,GO:0016192,GO:0016579,GO:0019538,GO:0019941,GO:0022624,GO:0030054,GO:0030071,GO:0030141,GO:0030163,GO:0031331,GO:0031410,GO:0031974,GO:0031981,GO:0031982,GO:0031983,GO:0032270,GO:0032436,GO:0032940,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0034774,GO:0036211,GO:0036230,GO:0042119,GO:0043161,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043299,GO:0043312,GO:0043412,GO:0043632,GO:0043687,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045321,GO:0045732,GO:0045787,GO:0045840,GO:0045842,GO:0045862,GO:0045931,GO:0046872,GO:0046903,GO:0046914,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051179,GO:0051234,GO:0051247,GO:0051603,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051983,GO:0051984,GO:0055044,GO:0060205,GO:0062033,GO:0065007,GO:0070013,GO:0070646,GO:0070647,GO:0071704,GO:0071944,GO:0090068,GO:0097708,GO:0099503,GO:0101002,GO:1901564,GO:1901565,GO:1901575,GO:1901800,GO:1901970,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902099,GO:1902101,GO:1902494,GO:1903052,GO:1903364,GO:1904813,GO:1905368,GO:1905369,GO:1905818,GO:1905820,GO:2001252
EggNOG free text desc.regulation of protein catabolic process
EggNOG OGsKOG2581@1,KOG2581@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03021,ko03036,ko03051
Ec32 ortholog descriptionPCI/PINT associated module
Ec32 orthologEc-16_002260.1
Exons10
Model size2253
Cds size1569
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815498.4049037-CDS-L-elsbetiae_contig1320:11041..112141622815498.4049037-CDS-L-elsbetiae_contig1320:11041..11214Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1320 11042..11214 +
1691682928.047956-CDS-L-elsbetiae_contig1320:11041..112141691682928.047956-CDS-L-elsbetiae_contig1320:11041..11214Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1320 11042..11214 +
1622815498.4183135-CDS-L-elsbetiae_contig1320:12305..124301622815498.4183135-CDS-L-elsbetiae_contig1320:12305..12430Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1320 12306..12430 +
1691682928.065168-CDS-L-elsbetiae_contig1320:12305..124301691682928.065168-CDS-L-elsbetiae_contig1320:12305..12430Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1320 12306..12430 +
1622815498.4285295-CDS-L-elsbetiae_contig1320:14181..144461622815498.4285295-CDS-L-elsbetiae_contig1320:14181..14446Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1320 14182..14446 +
1691682928.0767574-CDS-L-elsbetiae_contig1320:14181..144461691682928.0767574-CDS-L-elsbetiae_contig1320:14181..14446Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1320 14182..14446 +
1622815498.4384742-CDS-L-elsbetiae_contig1320:15910..160301622815498.4384742-CDS-L-elsbetiae_contig1320:15910..16030Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1320 15911..16030 +
1691682928.0845187-CDS-L-elsbetiae_contig1320:15910..160301691682928.0845187-CDS-L-elsbetiae_contig1320:15910..16030Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1320 15911..16030 +
1622815498.4483747-CDS-L-elsbetiae_contig1320:17447..175911622815498.4483747-CDS-L-elsbetiae_contig1320:17447..17591Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1320 17448..17591 +
1691682928.0937433-CDS-L-elsbetiae_contig1320:17447..175911691682928.0937433-CDS-L-elsbetiae_contig1320:17447..17591Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1320 17448..17591 +
1622815498.462109-CDS-L-elsbetiae_contig1320:18914..190561622815498.462109-CDS-L-elsbetiae_contig1320:18914..19056Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1320 18915..19056 +
1691682928.1022758-CDS-L-elsbetiae_contig1320:18914..190561691682928.1022758-CDS-L-elsbetiae_contig1320:18914..19056Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1320 18915..19056 +
1622815498.4760833-CDS-L-elsbetiae_contig1320:19602..197371622815498.4760833-CDS-L-elsbetiae_contig1320:19602..19737Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1320 19603..19737 +
1691682928.1115298-CDS-L-elsbetiae_contig1320:19602..197371691682928.1115298-CDS-L-elsbetiae_contig1320:19602..19737Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1320 19603..19737 +
1622815498.4879005-CDS-L-elsbetiae_contig1320:20215..203471622815498.4879005-CDS-L-elsbetiae_contig1320:20215..20347Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1320 20216..20347 +
1691682928.121285-CDS-L-elsbetiae_contig1320:20215..203471691682928.121285-CDS-L-elsbetiae_contig1320:20215..20347Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1320 20216..20347 +
1622815498.5049047-CDS-L-elsbetiae_contig1320:21290..214371622815498.5049047-CDS-L-elsbetiae_contig1320:21290..21437Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1320 21291..21437 +
1691682928.134946-CDS-L-elsbetiae_contig1320:21290..214371691682928.134946-CDS-L-elsbetiae_contig1320:21290..21437Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1320 21291..21437 +
1622815498.5176516-CDS-L-elsbetiae_contig1320:22379..225651622815498.5176516-CDS-L-elsbetiae_contig1320:22379..22565Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1320 22380..22565 +
1691682928.1447816-CDS-L-elsbetiae_contig1320:22379..225651691682928.1447816-CDS-L-elsbetiae_contig1320:22379..22565Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1320 22380..22565 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815498.5303872-UTR-L-elsbetiae_contig1320:22565..232491622815498.5303872-UTR-L-elsbetiae_contig1320:22565..23249Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1320 22566..23249 +
1691682928.153796-UTR-L-elsbetiae_contig1320:22565..232491691682928.153796-UTR-L-elsbetiae_contig1320:22565..23249Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1320 22566..23249 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1320.2500.1prot_L-elsbetiae_contig1320.2500.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1320 11042..22565 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1320.2500.1

>prot_L-elsbetiae_contig1320.2500.1 ID=prot_L-elsbetiae_contig1320.2500.1|Name=mRNA_L-elsbetiae_contig1320.2500.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=523bp
MVDVDTKDATAAKAAADNKDAAPVPTSIKVEDIVRNIELIVKAVESNTAR
LTTRAISRNTPIRHRVQADVLCEALAQLLPDDCPHKAELTKLLSKLPSEA
VVEPPLAEPMEVDSEAAKKEGEAAAAAGAKKQAAAAAAVAAVVAAALPEV
EVYLSTLALTTLLRHKANADAVAVASKLLERAVSFNRRTLDSLAAKTVFY
YSLAFEASGRLPEARPRLLALHRTCCLRHDEIGQATTLNLLLRNLLSQNL
LDQAYKLASKTNFPEGCSNNQFCRYLYYMGRIHALQLDYTDAYTKLMQSS
RKVPQNTAMGFQRAAQKLVIIVQLLLGEVPERSVFNQKGFVVSLRPYLAL
TQAVRQGDLVEFNRIVKEHEAIFRADKTFTLIQRLAHNVIKTGLRKINSS
YSRISLQDLCEKVKLETVQSAEFVCSKAVRDGVIDAVIDHENGWIQSQDV
VDVYATDEPQQAFHKRITFCLDVHNEAVRAMRYPPNAYKKELDAARPSLE
DDKTDEELAKEIEDEMNEEGGL*
back to top

mRNA from alignment at L-elsbetiae_contig1320:11042..23249+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1320.2500.1 ID=mRNA_L-elsbetiae_contig1320.2500.1|Name=mRNA_L-elsbetiae_contig1320.2500.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=12208bp|location=Sequence derived from alignment at L-elsbetiae_contig1320:11042..23249+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGTGGATGTAGACACGAAGGATGCAACAGCAGCAAAGGCAGCAGCAGA CAATAAGGACGCGGCGCCGGTGCCGACCAGCATCAAGGTCGAGGACATCG TGCGCAACATCGAGCTGATCGTCAAGGCTGTAGAAAGTAACACCGCTAGG CTCACCACAAGGGCGATCAGCAGGTGCGATATGTGCATGGACCCCGCGAG AGCTACGCAGCCCGGGCTTTTGTCGCTTGCCAACAAGCCGAGTAGTAGAT AAGCTGTACCTTTATAGAAACCTTCTGTGTACATAACCGTATGTGTTGCT TTGCCGCAGTGAAGGCGTGTTGGGCGGGGGGGCCGGCCGAGAGGTGTTGC GTGCAGGCTATCCAGAGACACCCCCCGGCAGTAGCATTTGCTCATGGCTA GTGCGGTGCACTCTTTTGTGTCATGGAGAAGGTCACGTTGGTCGCACAAA CGTTTGCATCTCTTGGCAGGGAGGCGGGAAATATAACATCAAAGAGTGCG GTGTTGGAGAGTCGAGACCGAAAGCCGGCCTTTTGGGGGCGCAAGGAAGC CAACAGAGCTTTGCAGCTACAATAGCTGCCTCTGCAGAACCTCTGGGCAC GAACAGCGATGTATTTCGAGCAACGGATATCGTGTTTGTGCATCTCTAGA TCGTGAAGCGATATTTTTCGGCGACGATATTGTAACCGTGGCGCGGTTGA ACTGGTTTGTCGAGCTCTCTCTCTCGTCATCTCTCTCTCTCACAGGCTCT TGGTCTCTCTCTGGCTCTTGGTCTCCCCGCACCCCTCTCTCTGTGTCTCC CCCCGACTCAAAACTGCTGATGTATGCCCCCCTCCCTATAACTATCTCTC TCTAACTATTAAATTTCACCGCATTTTGTCTCTTCCGTCCGCGGGACCTG CCCCCTTCCCATGTCGGTGCCGCTCGTTCTTCTTGCGGCGTCCCGTCTTC GGCTGATGTCGACGTGGTTGGTTGGTACGACGGTATGTGTTGGTGTGCAC GACTTGGTTGGTCGGGTTGTTGCTGGTGGTGGGGGCGCGGGGGGGGGGGG GGGGGGTGCGGGAATACGCCCATCCGACACAGGGGGCAAGGGGGCGTGCT GTGCGGGGGGGTGGCCCAGCTGCTGCCGGNNNNNNNNNNCTGCCTTTTCG TGTGTGTTGGGGGGGTGGTGTGGGGGGAGGGGGTTGTGTGGGTTGGTGCG GTTGTTGGGTGGGTGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG GGGGGCGTGTGCAGGAATACGCCCATCCGACACAGGGTGCAAGCGGACGT GCTGTGCGAGGCGTTGGCCCAGCTGCTGCCGGACGACTGCCCCCACAAGG CCGAGCTGACGAAGCTGCTGTCCAAGCTGCCCAGTGAAGGTGGGTACTGC GGTGGTTTATATTGATGGCGTTTTTTTCAGGTGTGTGTGTGTCTGTGTGT CTGTGTGTGTGTGTCTGTCTATGTGTCTGTGTGAGCTGCTGCTAGCTAGT TCTCTGGACTCGGGAGAAGGCGGAAGAAGGAGGGACGAGACGGGCCACAC ACTGGACGAAGCGTGGGAGAAAATAGGGAGATAATGCGACGTTTGCTCTG CTCCAACAAAGAGAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG AGAGAGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGGGAGAGAGAG AGAACTGATGTGCTGCCGTGGGACCAGGGGGCGACCGTGAGTGTTTTAAA TTGGCCACTCTGGCTTTCGCCAGTCAAGTGTTTATGTCCTCTTCAGTCGG GGCCTGTAAACCTTAACCCTTCCCTTCGTCCCCGCTGTTGCGCGGTCGAT CCAAATCGACCGCTCCGTTCGGAGTAGTTGTAGAACGATTAAGCGTGGAG CGTGTAGTTGGTGGGGGCGCGCGCGCGATTCGCCGCCCTCGCCGCCTTTC TCTAAAAAACAAATATGCAGAGTATATGACTATAACTACAGAATGGGGTC TGGGAATTTTGGTTCCGATTCTTAATCTGTGGGCTGTCGGCTTCCAATAG CCCAAAAAAACGTCAGTATGACAGCAGCTGTTCTCTTTCAGGTGAAGAAA AACACGCCGTCAGCAGCTGTCTTTTTCGGTAAGCGAAATACATGCTATTT GACCTGGCAGAGTTGTGCAGGAGAGGTGATGTACTTTTTCAACATTTTAG TTTTTTTTTTGCTGGGCCGAACCAATGTTACGTCACTACATAGAAAACCG TTGGAATCTCACGGGAGTCTCGTCTCCAATGTGGGTTATGTTCCATTTTT GATTATCTGTTTTACTTTCAAAAAGCTGATAAGTACACTGCTGAGGGGCA CAGACCTGCACAGCTGGGTTGACAAGGGCGGAGCGCGTTGACAAGGAAGG GCGGAGCGTCCGCACAGAAGCACCCTGTTGCTGTATTTTGGAGGGGAGCC GTTTCCGATTACAGACAGCAGCTGATCGACAAGAAAACGTGACGATGAAG GACCACAGCCGTTTTTCGCGGGAAAAGAGGCGTCTGAGTTCAAAATCTTA TTCTTTGGTTCAAAGATCTGGGTCAAAGATGTGGGTTCAAGACTCGAGCT CCTCTTTTTTCTTCCGTCTTGCATCACCCCCTGCCGCTGTGCTCTCATAT TAGCTCGCTCCGAAGGGGGATCTTGTAATAAGCTACGATACTGTATGTCG TGACTTGTTTGAGTTGGGACACATGAACCTGGCCAGGCGTCAAAACAAGA TGCACGCCCCTGCGCATGAAACGCCATAAGGGTCGTCGAGACGGTACAAC TGCTGACCACAAAATCTCCGCTCCTCAGGGAAACAGGTAGAGTCCGTATC TTTTCGGAAACAAAGCGCGGGGGTCCCGCTGCGTGTTTTAACTGCCCCAT CGTCTCCACGGTCGGAACGTGATGAGGGAGAGCGAATGTTGCTGGCAACT CTAGCCGCAGCAGTAAATCGTTCTCCTTTTCGAAAAAAGCATGCGGGTGA GGGTTCAAATGAGGAAAGTGTCGACAAAAAATGAAAAACACCGCCGCCGC CGCCGCCGCCGCCGCCCCCGCCCCCGCCCCCGCCCCCGCCCCCGCCCCGC CCCCTCCTCTCCTCCGCCCGCTTTCCACAACCCAAAACAGCGGTGGTAGA GCCCCCCCTGGCGGAGCCAATGGAGGTCGACTCCGAAGCTGCCAAGAAGG AGGGAGAAGCGGCCGCCGCAGCCGGCGCCAAGAAGCAGGCTGCGGCTGCG GCGGCGGTGGCGGCGGTGGTGGCGGCTGCCCTGCCGGAGGTGGAGGTGTA CTTGTCGACCCTGGCGCTGACGACGCTGCTGCGGCACAAGGCCAACGCGG ACGCGGTGGCCGTCGCCTCGAAGCTCCTGGAGCGGGCCGTGAGCTTCAAC CGGAGGTGGGTTGGGTATTTTGTTTTTGTTATTTTTCATTTATTTCCGGT GGTGGATGGATGGGCTCCTTGGCACGAGGACATCTTGCCAGAGTATTGCA CCGTGGTCACACAGAAGGGTCCCTGTCCCCGAGGCCCCCGCTCCTCCCTT CTGCAGTGCTAGCCCCCCTTAAGATTTTTGTGGCGAGAAGAGTTCAGCCG TCCCTTTCCCTCGTCGACGGCGAGGTCGAAGTTTTGGGTGTGGGTGTTTG GGTGGGTTGGAGGTGGTGGCCAACGCGGGCAGGCTTCGGTGCGCAACTAC TGCTAACGCTGTGGTTCTGTGTCCTGGGGTGTGTGCGTCGATGGATGGTG GTTCTTTGTGTGTCGTCACGAACTGGCGCACAAGCCGGCCATTGGACGAC GACCCCAGCATGGGGCGTGTGAAGCGCGGGTTTGCGTGCAGGCTGATGTT AAATTCAGACATTTTTTGGTATCTTCGCGAATGTTTTTTCTTCTTATATT TGTTTTCTTCTTTTGGCATTGATCTATCTATTCGGTCAACCGCGGGCCTG CTGCTAGGACGAGCCTTCATAACCCTACCTAAAATCGAAGCTTCAAGCAG TACTCGTAGGCGGGTCGGGCGTTGGGCGTTTGGGCTTTGTTTTGTAGGGG CGTTTTCGGCGCGCAATATTTTTGCGTTTGGGAAGAGCACACGTCGTTAC GTCACTGCTTGTACTGCTGTTGTGTTGTAGTGGTGGCTTAGTTTTTGCTA TGTTGGCGGGAACGTTCTCCGGTGGTGAGGGTGGTAAGTGAGGTGAGCTG CTGCTGGGGGGCAGCCTTGTACGGTGTGTTTGGCATGCATGGCATGTGCC TGGATCACGTCCCACTATTTAATTGTCTTTGATGCTGGTGGTGAGCTTCT GGTGCACGCCGTTTCGTGTCGGTCGGCCTCTCCTTCGCAGCCAAGTAGAT GTGCTGTCCTATTTATTCCGCAATGGATTTCCGAGACGTGTTATTTGACA TTTGGAGTTTTCTCTCTCGCTCTCTCTTTCTCTCTCTCTCTTTCTCTTTC TCTCTTTCGCTGTGAATGTGTGTGTATGTGTGTGTGTTTCGAGTTGCCCA TGCCCGCTTCAGTCCGATGACCTCACAGTATCAGTTGCAGCACATGTCCA ACCCTGTGAAACGAACCCCGAGAGAAGGGAACGACTTTTCCCCCAGTTCG GACGCGGGCCGCAGACGTTTACATACATAGAAACACTTATTAAAAAAAGG AAGTCGTTTCTTCGCCCTGGTATGGGCGGCTCGCCATTTGGCGTCGGCGG TGAAGGCGCCTGTTCGAGTTGCATGTCGCTGTTGCCGCTGCCCCATGCTG GCGAATTCCCTTGCAACGCAACGCTCACCAACCCCGTGTGTTTATTTTTG TGTATTTGCGTGTCACTTTTTTCCCCCCCTCTTTAAAACGTGTCGAATTA TGGGCACCGGCACGCGCAGAACGTTGGACTCCCTGGCGGCGAAGACGGTG TTCTACTACTCTTTGGCGTTCGAGGCCTCGGGGCGCCTGCCGGAGGCGCG TCCGCGCCTGTTGGCCCTCCACCGCACGTGCTGCCTCAGGCGAGATGTTT TATTTTTGGCTTCGATTGCACTCTTCAACGCAGAAAGACGAACTTCTATT CTTTATTTTATTTTATTTTTACATTTAACCCTTCTGTGTCTTGAAGTGTG ATTTATTGATCACAAAAGTTGAGTACTGAAAAGCCTTTTTCCTGCGGACC TGGGCTGGTCGGCATATCGGGGTGATAATATATGAACCCCCTGACATGGC CACGCACGCAATTGTGCAGAAGCAGAGGCGGTTACACGCTGCATGTGCAT TAGATAGGTTTCGCCTCCACAACGAATGCCTGCTGCTGTGCCGCCGCCGC CGCCGCTGCTGCTGGGTTGTTTGGATTGCTATACAAACATGCTTCAAGAA CATGCGAAAATCTGTGGTGCGGTCTCTCTCATCACATACAACACCAGATG AGCAGCGCACCCACGACATCATCAGCACAACTATCCACATCCACATCCAT CCACACATGCATCACCAGGCATACGTCTGTCTTCCGTTGAACACCAGCAA CCGGTATAGATCGATCTGCTCACTGCCGTTGGCTATTTATTACGAAGTGA CTGGGCGCTAGGTGGGACTGTCAGAGACGTATAGAGACGCTACTTTCCCG GTTGGGCCTGAACAAGCCGTAGCTTTCCCACTACAATAACCCTCGACGTC AGGCTTTGGCAGAACGGACATCCGTGTGCGTGATGTACGATGTGACAATC GTGCACGTACATACAACAAACAGAGCGCTTCTTCATGAGGCGGGACGCCA TCCGGCGGCCCCCTCAAGTAGAGAAGTCTACTTTTCTGCTCGGGGACTTC ACCTACAAAAAAATGATCATAAGAATTGATCGTTTGAGTAGTCAAAAACC TAGATGGTTCCCAGGTTGTCCTCTACCTGAGACCACCCAGCAAGGTGAAA ACTCGACAAAGAGAACTAGCAGTGACATTTTGCAGACCCAGGAACCTTTC TAGTGTCTCACCCAACGCCCCTAGCCTAGCGCCGGCCCGTCAAAGGGCCT CGGTGCGTGTTCAGATATTGGCATCGAATTCGGAGAGAAAAGTCTCTTTC TGCAGAGATTCTGCATAAATAGAGAACCTTTTTGCTGTGTGCGGACCTTC AAAATATGAAAAGACTCGGGCTGCTCGACGCTCGACCTGCGGAGGATCAA GGAGCCTAGTCTCAGAGGGGTTGAATAAGGCGCATACATCCGTATGGGGC AGGGGCCTGCGTGGGCCGATACTATTTGCTTTCTTTTGTTTCTGTTTCAT CCCTGCTGTTGCCTGTTGCTGCTGCTGCTGCTGTGCTGCTGCTGCTGCTG CCACACTACTACTACTATTACTGCTACTACAGACAAACCACGACGAGCAA ACCAACGAAGCAATCACGTAACCATGCCGTCCTCACCATGCCATCACCAA CAACAGGCACGACGAGATCGGGCAGGCAACGACTCTGAACCTGCTCCTGA GGAACCTCCTGTCCCAGAACCTGCTGGACCAGGCCTACAAGCTCGCGTCT AAGACAAACTTCCCCGAGGGTTGCAGCAACAACCAGTTCTGCCGATACCT GTGAGGGCCGTTACATGCGTGCTACAGCAGCAGTAGTATGCCCTGCCCTC CTGCGGCGGCGCTTGGTGTCATCCGTCTCTGTGGCCCTTTTTGCCTTGCT TGGCAGCTGTATGTTTGTATGTATGTATCATATGTATGCATCTGTTTTTA ATTTATGTATAATTACAAATGTCAGCAGTCTACTTACGTACGTCCAGTCT GCGAAAAAGTCGTTCAAGAGGGTCTGTTGTTTTTATGCACTGCATAATAA CCCCCTTTCCCCCCAAGATATACTCGCACAAATCCGTAATCCATGTATTT ATAAATACAGCAGCATTTTTGTAGTTCGACGGCGAAAAAATCATTTCAGA GGGTAGACATGTTTTTGGGTGCTATCTTTTCATTCCTCTCCTCCCTCGTC TTGATATTTTCTTCTCATGAGTCCAAGAAAACATTGATTTCCCCGACACG TGCAAACGACCCGAGAGGCTCTTCGCGTATGTATAATGTATGTACCGTAG GTGACACAAGATACCGCACCCCCTGGGCCGAATTTTAGAGCTCCGTTACT CCGCAACGAAGAAGTTTTCAGCACCAAGTGACGTTTGTATTTTCAGACAG CGCTCGACTAGATCTTTCCAACGACACCCCTCTCGGCACTGGCACTCTTC TTGCTGGAGGAGGGATCGAGCTTTGAAAATCTGTCCAGTGGGTGTGGTAT CTTGTGTCACCTATGCATGTACGTGTGGAATGTTTTTACGTTTTGCATCC CATTTAGTATGTGTACAGTGTACAGCAGATATTTTTTTTTGTACGTATAC GAAGTATAACCGCAGCAGCAAAAAACAGTTCTGCCAGTACATGTATACCT GCGAGACAGAGGTATTTGTAGGTGCCCGCTAAGTATAGAGATAAATCCGC TCGTGATCGAAAGCAAGAACGACGCCCTTTCGCGCGGTCCAGCCGCGGCA CAGGGCGCCTACCCCTCGAAGGAGGCCACTACTGTGCTGTCACACGCGGA GCACAGGCTCTCTCTCCCCACCACCACCGATTAAGAACCAAGCCTCCTGT GGATATAGAAGGGGTTGGTTCGCTTTTGGGCCGTGTTTGGCTGTCAGTCA ATCTTACACATTCTCACCGAAGTACGTACCTCCTTTCCTCTGTTTAGTTG TACAACATGGAGCTATTGTATATACCCCGGAAAATGTTTCCGTTCTCGGC CGCCGCCCCCCCCCCAATTGTTGATCTTCCGCGCGAGTTTGCTCACTTGT GTGTGCTCTCGTGTTTTTCTGGATGTTTTTTTTTTTTGTTTTTCCTTGTT TTTCCTCGTGTGTGTGTGTGAAGGTACTACATGGGGCGGATCCACGCGCT GCAGCTTGACTACACGGACGCCTACACCAAGCTTATGCAGTCCAGCCGCA AGGTCCCGCAGAACACGGCCATGGGGTTCCAGAGGGCGGCGCAGAAGCTC GTCATCATCGTCCAGGTGTGTTGGCGGCCCCCTGGATCGCTCGGGATGGT ACTACTGTGTGAGGGGGGTGGAGGTGGTCTGTGGTGGCTTGCTGCTGCTC TAGTTTTTGTTGCTGGGGGGGGGGGCGGGCAGGGTGGTTGGCTAGCGCCG GCGGTGTTGGTGGTGTGTTCTGGTGGTGGTCGTGGCGTGGTCATGTTGGC CTCTGTTGTTGTAGTGGCTTCTGGTGGCGTGTTTCTGCCGTTGCTGCTGC TGCTGCTGCTGCTGTGGCGGGGGGTGGTGGCCCTAGACCCGAAGCGCTCG TCAGGAAATGCGTGTCCCACCTCCGTCGTGTGTGCCCGTTCGATCCCGCC GCGTTCTCTTTCGTGTTTCGTGGTTGTGCTTTTGTTTTGTAAATATTGAT TTCTCTGATGCTCACCCCCCCCCCCCCACCCCCACCCCCACCCCCACCCC CACCCCGTGATCTTAGACTGACTATTGTACTGTTCACGGCTCATCGTCTG TTTGATGGCCGATTTTTGCCCCTTCCCGCCGTATGTATTGTTTTTTTGTT TTTTTTGCCAGCTGCTTCTCGGAGAAGTACCAGAGCGCTCGGTGTTCAAC CAGAAGGGGTTCGTAGTGTCCTTGAGGCCATACCTTGCCCTCACGCAAGC GGTTCGGCAGGGGGACCTCGTGGAGTTCAACCGCATCGTCAAAGAGGTTC GTTGGAAATGAAGGGGGGACTGGGCGTAGAGTTTATTTTTGCCGTCCGCT TTTTGCATTAGATGTATGTATGTACATGTTATCACGTTTTTGTTGTTGCC GGTATTTTTTCTCTTTTTAACTCCCCTGGGGCTTGCAGTTGGTTGTGCGG CCGTCCTGTGGTATGCATGCTATGTATGCAAGGGCGGCGGTCCTAGGAGA TCCCATGTACATTTGTGCGCGCGCTGTGCGATGCTGTCCTGGGCTGTGTT GGATCTGCTGTTTATGTAGGTGGTGCGCTGTGTTTGGCTTCGTCTTGCGC GTTTTATGGCATCTCCTTGCTTTGCGTTCCGTTCCGTTCCGTTCCGTTCC GTTCCGTTCTGTCTGCCCTGCTCTAACGTTGCCGCCCTGTGTATGTGTGT GTGTGTGTTGCGGCCCTGTGTGTGTGTGTGTGTTCCGGGCTATTGGTGGC TCGATTGCTATTATCGTCGTACAGCACGAGGCCATCTTCCGGGCGGACAA GACGTTCACCCTCATCCAGAGGCTGGCGCACAACGTCATCAAGACGGGTC TCCGCAAAATCAACTCCTCCTACTCCCGCATTTCCCTGCAGGACCTGTGC GAAAAGGTATGCTATGCCGTGGAGGGGGGTTGCAGGGGGGGGAGGGGGTG CATCGGCGGTGGCTCTTTTTGCCTGTTAAGAATCGACGGAAATAAACGGC TCCAGACAAAAGGCCTCCAAGTCGCTGGTGCGGCCTTCGGCACGACAGTT GGTAGTTTGGCGCTGGATGGCCCGTTTCAAGTTTCCTGTGCGGGGTCCGA CTCCGCTTGTCAATACTTACTTTGAACCGCGCTAAGCCCATCACAGTGTA ATTTCGTCCTTCATAGTATAAGTTACTTTGGGGTTTGTTTGGTTGTGTCT ATGTTCAGGGGGGTCGTTCTTTTGCTTGGTTTCGACCCTCGCGTCGAAAC CTGCCACATCGCGATCGGTGGGGTGGAATCGAGTGATGCATGCAAACGGG TCGTTCGTCGCGCAAACACCAAGCCGCAGTGCGTGGCTTCTGGCTTCCAC CGCTGGCCCGCGAGGTGTTGAGCGTTTCCGCATCCAACGATGGGTTGGCA CTGCTGCGGAAGGGTGGGGAGGTTGTGCGAAACGCTGGGAATGTACCACA CGAGGCACGGCGATCACGTTGCGCGCCGTCGTTCCCTCCCACGCAGGCGC TATGTACCTCGCCGGCCATACTTCTTGTTTCTATGTAGAAACGAGCCGGG CTTTTCTCAGCGGGTGCATTCATTCGCCGTCTGGAGTACAACCGTCTAGT CCTCGAATGGCATTGTGTGATGTTTGCATGGTAGCTGAGCCTCCTTCCAC GTCATGCAGGGAGCCCTCGGAAATCATCAATCAAGAGTGTCGTGCGTTTC TGCATAAAACCTGGTGCGCTTGCATTCACTCGTCGTTTTTTTTTTATCCA AAGTTCGATGGGAACCACCACCTCTCGCCGGTCTGTGTGTCTCCCTCCCT CCCCCCCTCCCTCCCCCTCTACTCCGCACCCTTCGTTTCGCGAGAGCAGG TGAAGCTGGAGACCGTGCAGAGCGCCGAGTTCGTGTGCTCGAAGGCCGTG CGGGATGGGGTCATCGACGCCGTGATCGACCACGAGAACGGCTGGATTCA GAGCCAGGACGTTGTGGACGTGTACGCCACGGACGAGCCGCAACAGGTGT GTGTGCGCGTATTTGCGTGCGTTTTTGCGTTTCTGCGTTTTTGCGTGCGT GCGCGGTTGTGCTTTTTGCGCCGACCGCTCTGTCCGACCGGCCTATCGAA GACGTCCGTCTCAGCGGGTGAAAAAGCCGGTGCTGGTGCTGATGCTGGTG CGTTTTGCGGCATGTACAGCAGTAGATTAGCCACCGAAATTTTGTGCCTG TGGCCATGAACCAGAACATATACCCCCGGGGTAGCGCCGCAAGGAAAACG TACGAAGAACACGCATGGGTTGCACTGAAGATAAAAACGGAGGCCCTACG GGCGAGAGGCTACCGATACTCGCCACCAGTTCAAACCAATAGAAATTTCA TGGATATGTACTTGCTGACGGCGCAGAATAAAAAGTCAACCCGTTTGTCA TACCCGACGACCAAAAGCAGGAACAGCTACATACGGCGGATGCAAGGTTT TCCCCACCGAACTACTGGTTGTGTGTTCAACGCATCGATCAGCATACCGT CCAATACAATCGGCGTTGTTTGCATCGCTTGTAGCAGGGTGCTGAAGCAT TTAACGCACGACCGGAAAACGCATGCCGTGAATATGAAGGCCTGTATTTT TCGGCGTTTTCCTTGCCTCATTCCGACCCCACCGACTAACTCTCCACAAT ACAGTACATTTTTACTCAGAAGGTGGTAAAAATGCGTCATGTCTTCCTTC ACCTGAGAGTTGCCGACCTTTTCTCTCCCCTTATCGATGGTGCGGATACA TACATACAGGTTCAAAGGTGTGTTTTTGCTATATTTGACGTCTCTCTGCT CCCCCTTTCTGCTCTTTTTCTCCCTCTCGTCTCTTCTTTCTTTCTAGTCG ACGAATAATCCCTTCCTCTCGCCTCTCGTCCCTCCCTTGCCTCGCGTCGA CGAATAACGCCTTTTTTAAAAATCTATTTTCATACCAGGCGTTCCACAAG CGCATCACCTTCTGCCTGGACGTGCACAACGAGGCCGTCCGGGCCATGCG CTACCCGCCCAACGCCTACAAGAAAGAGCTGGACGCGGCTCGGCCCAGCC TCGAGGACGACAAGACGGACGAGGAGCTGGCGAAGGAGATCGAGGACGAG ATGAACGAGGAGGGCGGTCTCTAGACAGGCGTGCTTCCTTGCAGCACACC CCCCCCAATTCTGAAAAAGTGGCTGTGTGGGTGGGGATTTTCACTCTAAA TATGTAATTCTCTTTTTTGAGAATTCGGGGCTCTAGTGGCGTTCGCTTTC GGATGGGAGGGTGATGATGGTTGTGGAGTTGCGGTTGTGAAACGCTTGTC GGGCGGAAGCGGGGGCGCGCGCACACTCGCCCTCGTCGGGTAGGTCGGGT TACCTCGACCTTCGTTGATGTTTGTGTTCTCCAAAGCGTAGATACAGGCA GCTTTCATTTGCGGACTTGAGGTTCTCTTGTACGGCATTCATACCATGTT TGCGGCGGGTGCGCGGCATTGAACGAAATGGACTGAAGGCATTCCTACGT TTGGAGAGATTTAAGCATGTATTGCGTGTCGGTCGGCTACACTGGGAGCG AGTGGAATGGGTCTTCCCTGCGAGAGACTGTTGGAGGTTCGCGCCCACCT TTTGCCGGAGATTTTTTCCTTCATGGACGGTGCCGCTCCGTGTCGGTAAA TGTTTATTTAAGCCAACAACAGTTGCGGGGCCTCCAAGGAGCTGTGCTCT TTGGCGTATGTTCCGGTCTCCTCTCCATGCAGCGAGTGCTCGTCTACATC CGTACACTTTGAGCGAGCTCTGGGTTCTTCGTAGACGCCGCTGGAGCAGG CCTCGCAC
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig1320:11042..23249+

>mRNA_L-elsbetiae_contig1320.2500.1 ID=mRNA_L-elsbetiae_contig1320.2500.1|Name=mRNA_L-elsbetiae_contig1320.2500.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3138bp|location=Sequence derived from alignment at L-elsbetiae_contig1320:11042..23249+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGTGGATGTAGACACGAAGGATGCAACAGCAGCAAAGGCAGCAGCAGA
CAATAAGGACGCGGCGCCGGTGCCGACCAGCATCAAGGTCGAGGACATCG
TGCGCAACATCGAGCTGATCGTCAAGGCTGTAGAAAGTAACACCGCTAGG
CTCACCACAAGGGCGATCAGCAGATGGTGGATGTAGACACGAAGGATGCA
ACAGCAGCAAAGGCAGCAGCAGACAATAAGGACGCGGCGCCGGTGCCGAC
CAGCATCAAGGTCGAGGACATCGTGCGCAACATCGAGCTGATCGTCAAGG
CTGTAGAAAGTAACACCGCTAGGCTCACCACAAGGGCGATCAGCAGGAAT
ACGCCCATCCGACACAGGGTGCAAGCGGACGTGCTGTGCGAGGCGTTGGC
CCAGCTGCTGCCGGACGACTGCCCCCACAAGGCCGAGCTGACGAAGCTGC
TGTCCAAGCTGCCCAGTGAAGGAATACGCCCATCCGACACAGGGTGCAAG
CGGACGTGCTGTGCGAGGCGTTGGCCCAGCTGCTGCCGGACGACTGCCCC
CACAAGGCCGAGCTGACGAAGCTGCTGTCCAAGCTGCCCAGTGAAGCGGT
GGTAGAGCCCCCCCTGGCGGAGCCAATGGAGGTCGACTCCGAAGCTGCCA
AGAAGGAGGGAGAAGCGGCCGCCGCAGCCGGCGCCAAGAAGCAGGCTGCG
GCTGCGGCGGCGGTGGCGGCGGTGGTGGCGGCTGCCCTGCCGGAGGTGGA
GGTGTACTTGTCGACCCTGGCGCTGACGACGCTGCTGCGGCACAAGGCCA
ACGCGGACGCGGTGGCCGTCGCCTCGAAGCTCCTGGAGCGGGCCGTGAGC
TTCAACCGGAGCGGTGGTAGAGCCCCCCCTGGCGGAGCCAATGGAGGTCG
ACTCCGAAGCTGCCAAGAAGGAGGGAGAAGCGGCCGCCGCAGCCGGCGCC
AAGAAGCAGGCTGCGGCTGCGGCGGCGGTGGCGGCGGTGGTGGCGGCTGC
CCTGCCGGAGGTGGAGGTGTACTTGTCGACCCTGGCGCTGACGACGCTGC
TGCGGCACAAGGCCAACGCGGACGCGGTGGCCGTCGCCTCGAAGCTCCTG
GAGCGGGCCGTGAGCTTCAACCGGAGAACGTTGGACTCCCTGGCGGCGAA
GACGGTGTTCTACTACTCTTTGGCGTTCGAGGCCTCGGGGCGCCTGCCGG
AGGCGCGTCCGCGCCTGTTGGCCCTCCACCGCACGTGCTGCCTCAGAACG
TTGGACTCCCTGGCGGCGAAGACGGTGTTCTACTACTCTTTGGCGTTCGA
GGCCTCGGGGCGCCTGCCGGAGGCGCGTCCGCGCCTGTTGGCCCTCCACC
GCACGTGCTGCCTCAGGCACGACGAGATCGGGCAGGCAACGACTCTGAAC
CTGCTCCTGAGGAACCTCCTGTCCCAGAACCTGCTGGACCAGGCCTACAA
GCTCGCGTCTAAGACAAACTTCCCCGAGGGTTGCAGCAACAACCAGTTCT
GCCGATACCTGCACGACGAGATCGGGCAGGCAACGACTCTGAACCTGCTC
CTGAGGAACCTCCTGTCCCAGAACCTGCTGGACCAGGCCTACAAGCTCGC
GTCTAAGACAAACTTCCCCGAGGGTTGCAGCAACAACCAGTTCTGCCGAT
ACCTGTACTACATGGGGCGGATCCACGCGCTGCAGCTTGACTACACGGAC
GCCTACACCAAGCTTATGCAGTCCAGCCGCAAGGTCCCGCAGAACACGGC
CATGGGGTTCCAGAGGGCGGCGCAGAAGCTCGTCATCATCGTCCAGGTAC
TACATGGGGCGGATCCACGCGCTGCAGCTTGACTACACGGACGCCTACAC
CAAGCTTATGCAGTCCAGCCGCAAGGTCCCGCAGAACACGGCCATGGGGT
TCCAGAGGGCGGCGCAGAAGCTCGTCATCATCGTCCAGCTGCTTCTCGGA
GAAGTACCAGAGCGCTCGGTGTTCAACCAGAAGGGGTTCGTAGTGTCCTT
GAGGCCATACCTTGCCCTCACGCAAGCGGTTCGGCAGGGGGACCTCGTGG
AGTTCAACCGCATCGTCAAAGAGCTGCTTCTCGGAGAAGTACCAGAGCGC
TCGGTGTTCAACCAGAAGGGGTTCGTAGTGTCCTTGAGGCCATACCTTGC
CCTCACGCAAGCGGTTCGGCAGGGGGACCTCGTGGAGTTCAACCGCATCG
TCAAAGAGCACGAGGCCATCTTCCGGGCGGACAAGACGTTCACCCTCATC
CAGAGGCTGGCGCACAACGTCATCAAGACGGGTCTCCGCAAAATCAACTC
CTCCTACTCCCGCATTTCCCTGCAGGACCTGTGCGAAAAGCACGAGGCCA
TCTTCCGGGCGGACAAGACGTTCACCCTCATCCAGAGGCTGGCGCACAAC
GTCATCAAGACGGGTCTCCGCAAAATCAACTCCTCCTACTCCCGCATTTC
CCTGCAGGACCTGTGCGAAAAGGTGAAGCTGGAGACCGTGCAGAGCGCCG
AGTTCGTGTGCTCGAAGGCCGTGCGGGATGGGGTCATCGACGCCGTGATC
GACCACGAGAACGGCTGGATTCAGAGCCAGGACGTTGTGGACGTGTACGC
CACGGACGAGCCGCAACAGGTGAAGCTGGAGACCGTGCAGAGCGCCGAGT
TCGTGTGCTCGAAGGCCGTGCGGGATGGGGTCATCGACGCCGTGATCGAC
CACGAGAACGGCTGGATTCAGAGCCAGGACGTTGTGGACGTGTACGCCAC
GGACGAGCCGCAACAGGCGTTCCACAAGCGCATCACCTTCTGCCTGGACG
TGCACAACGAGGCCGTCCGGGCCATGCGCTACCCGCCCAACGCCTACAAG
AAAGAGCTGGACGCGGCTCGGCCCAGCCTCGAGGACGACAAGACGGACGA
GGAGCTGGCGAAGGAGATCGAGGACGAGATGAACGAGGAGGGCGGTCTCT
AGGCGTTCCACAAGCGCATCACCTTCTGCCTGGACGTGCACAACGAGGCC
GTCCGGGCCATGCGCTACCCGCCCAACGCCTACAAGAAAGAGCTGGACGC
GGCTCGGCCCAGCCTCGAGGACGACAAGACGGACGAGGAGCTGGCGAAGG
AGATCGAGGACGAGATGAACGAGGAGGGCGGTCTCTAG
back to top