mRNA_L-elsbetiae_contig1320.2497.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1320.2497.1 vs. uniprot
Match: D7G3P2_ECTSI (Similar to ankyrin 3, epithelial isoform e isoform 19 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3P2_ECTSI) HSP 1 Score: 315 bits (806), Expect = 2.440e-97 Identity = 189/310 (60.97%), Postives = 219/310 (70.65%), Query Frame = 1 Query: 1 LHYAAKHRHPDSIDALVEAGADLEAEAGFGKGTALHIAAESPGCETTLLALLRHGAKVDPVRHGDKTPLLLAVEDDNVGVANLLVSAGAEVRAPLLLASESSRSDAMILTLLRGGADVNTKRASDGNTPLHLAAMTGNFPFVDVLLKAGGDETTANNHGETPLDVVGRRKGTW-WLIFGP--PDYNIRALLVNAPRDRADRAWSRRGFFMLCRAFPERVRLQLAPSQDDRVNDAPS-----AASSASDDSFISRENKKRVATAAERGGGKGERLAGALTDEGVATAFRAAMGRLMGLEADIVFRTIMEFV 906 LHYAAKH IDALVEAGADLEAE G G GTALH+AAE P E TLLALLRHGAKVDP+R+G +TPL +AV+ NV A LVSAGA+VR LL S M+L LL GA VNTK ASDGNTPLHLAA VDVLL+AG DET N+ G+TPLDV+G + T L+FG + IR LLVNAP+DRA+RAWSRRGFF+LCRAFPERV+ QL S DDRVN S A+ DD SR N KRVATA E+ G + ER + A +EG ATAFRAAMGRL+GL+ ++VFRT++EFV Sbjct: 220 LHYAAKHSQLGVIDALVEAGADLEAEGGLGVGTALHVAAEFPDSEATLLALLRHGAKVDPIRNGSETPLSVAVKARNVCAAKALVSAGADVREHLLRESVECSQHDMLLALLGRGAHVNTKGASDGNTPLHLAAEKSFRVKVDVLLQAGADETAVNHKGQTPLDVIGLKTDTMRTLMFGDHREEDAIRTLLVNAPKDRANRAWSRRGFFVLCRAFPERVQQQLVLSGDDRVNVVCSNVCSQASCGNDDDRSDSRNNAKRVATAEEKEGVE-ERPSAAHVEEG-ATAFRAAMGRLIGLQVEVVFRTVLEFV 527
BLAST of mRNA_L-elsbetiae_contig1320.2497.1 vs. uniprot
Match: A0A6H5L850_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L850_9PHAE) HSP 1 Score: 192 bits (488), Expect = 5.440e-52 Identity = 137/305 (44.92%), Postives = 169/305 (55.41%), Query Frame = 1 Query: 1 LHYAAKHRHPDSIDALVEAGADLEAEAGFGKGTALHIAAESPGCETTLLALLRHGAKVDPVRHGDKTPLLLAVEDDNVGVANLLVSAGAEVRAPLLLASESSRSDAMILTLLRGGADVNTKRASDGNTPLHLAAMTGNFPFVDVLLKAGGDETTANNHGETPLDVVGRRKGTW-WLIFGP--PDYNIRALLVNAPRDRADRAWSRRGFFMLCRAFPERVRLQLAPSQDDRVNDAPSAASSASDDSFISRENKKRVATAAERGGGKGERLAGALTDEGVATAFRAAMGRLMGLEADIVFRTIMEFV 906 LHYAA IDALVEAGADLEAE G G TA H VDP+R+G +T L +AVE NV A L SAGA+VR L S S+ M++ +L GA VNTK ASDGNTPLHLAA VDVLL+AG ET N++G+TPLDV+G T L+FG + IR LLVNAP++ ER + ++ +DD +D +R N KRVATA E GG +G + A +EG ATAFRAAMGRL+GLE ++VFRT++EFV Sbjct: 158 LHYAANQSQLGVIDALVEAGADLEAEGGLGVSTAFH---------------------VDPIRNGSETSLSVAVEAHNVCAAKELASAGADVREHPLRESAEKWSNHMLIAMLGHGAHVNTKGASDGNTPLHLAAEKSFRVKVDVLLQAGAHETAVNHNGQTPLDVIGLNTDTMRTLVFGNHREEDAIRTLLVNAPKE----------------GRIERGLVGVSFGKDDEPSD--------------NRSNAKRVATAKETGGVEGP-PSDAPVEEG-ATAFRAAMGRLIGLEVEVVFRTVLEFV 409
BLAST of mRNA_L-elsbetiae_contig1320.2497.1 vs. uniprot
Match: D7G0W2_ECTSI (Ankyrin repeat domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0W2_ECTSI) HSP 1 Score: 133 bits (334), Expect = 1.580e-31 Identity = 111/299 (37.12%), Postives = 148/299 (49.50%), Query Frame = 1 Query: 55 AGADLEAEAGFGKGTALHIAAESPGCETTLLALLRHGAKVDPVRHGDKTPLLLAVEDDNVGVANLLVSAGAEVRA---------PLLLASESSRSDAMILTLLRGGADVNTKRASDGNTPLHLAAMT----GNFPFVDVLLKAGGDETTANNHGETPLDVVGRRKGTWWLIFGPPDY--NIRALLVNAPRDRADRAWSRRGFFMLCRAFPERVRLQLAPSQDDRVNDAPSAASSASDDSFISRENKKRVATAAERGGGKGERLAGALTDEGVATAFRAAMGRLMGLEADIVFRTIMEFV 906 AGAD+ G + L + S G + T L R + G T L A + N +LLV AGA + A PL LA+ + + A+I L R GADV+ + GNTPLH+AA ++ VD LLKAG DET + G+TPLDV+ R L+ + R++LVNAP+DRA RAWSRR FF++CRA P+RVRL + DD+ S KK +A AA G G R GA D A F+ AM L+ L+ D +FR I+ F+ Sbjct: 3 AGADVNVRDGSNGYSPLDCSVRSDGMDLTRQVLQRGAIATESSSDGC-TALHWAGWNMNASAIDLLVGAGANLEAKIAADAEATPLHLAARQAGNAAVIEALARHGADVHAQETPSGNTPLHVAAQNCTTESSWETVDALLKAGADETRLDCQGQTPLDVLEARIAAGDLMGASVNEAERTRSVLVNAPKDRAQRAWSRRSFFVMCRAHPDRVRLTVV------------------DDTTTSPRAKKTMAAAATAVG-SGRR--GANRDS--ADNFQRAMRSLIRLKEDGLFRKIVAFL 277
BLAST of mRNA_L-elsbetiae_contig1320.2497.1 vs. uniprot
Match: A0A6H5KHT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHT9_9PHAE) HSP 1 Score: 98.6 bits (244), Expect = 3.140e-18 Identity = 101/327 (30.89%), Postives = 131/327 (40.06%), Query Frame = 1 Query: 43 ALVEAGADLEAEAGFGKGTALHIAAESPGCETTLLALLRHGAKVDPVRHGDKTPLLLAVEDDNVGVANLLVSAGAEVRAPLLLASESSRSDAMILTLLRGGADVNTKRASDGNTPLHLAA-MTGN--------------------------------------FPFVDVLLKAGGDETTANNHGETPLDVVGRRKGTWWLIFGPPDYNIRALLVNAPRDRADRAWSRRGFFMLCRAFPERVRLQLAPSQDDRVNDAPSAASSASDDSFISRENKKRVATAAERGGGKGERLAGALTDEGVATAFRAAMGRLMGLEADIVFRTIMEFV 906 AL+ AGAD+ G + L A S G + T L R + G T L A + N +LLV AG AD+ K A + TPLHLAA GN + VD LLKAG DET + G+TPLDV+ R ++ + R++LVNAP+DRA RAWSRR FF++CRA P R RL + D +PSA K++AT A G G D A F+ AM LM L+ D +FR I+ F+ Sbjct: 207 ALMAAGADVNVRRGSNGYSPLDCAVRSGGMDLTRQVLQRGAIATESASDGC-TALHWAGWNMNASAVDLLVGAG---------------------------ADLEAKLADEEVTPLHLAARQAGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNCTTESSWETVDALLKAGADETRLDCQGQTPLDVLEARIAVGDVVGANAAEHTRSMLVNAPKDRAQRAWSRRSFFVMCRAHPNRARLTVV----DGTTTSPSA---------------KKLATEATA---VGSGWRGTNWDSR-ADIFQRAMRSLMLLKEDGLFRKIVAFL 482
BLAST of mRNA_L-elsbetiae_contig1320.2497.1 vs. uniprot
Match: D8LQN0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN0_ECTSI) HSP 1 Score: 90.9 bits (224), Expect = 1.150e-15 Identity = 79/239 (33.05%), Postives = 113/239 (47.28%), Query Frame = 1 Query: 226 DNVGVANLLVSAGAEVRA---------PLLLA-SESSRSDAMILTLLRGGADVNTKRASDGNTPLHLAAMTGNFPFVDVLLKAGGDETTANNHGETPLDVVG--RRKGTWWLIFGPPDYNIRALLVNAPRDRADRAWSRRGFFMLCRAFPERVRLQLAPSQDDRVNDAPSAASSASDDSFISRENKKRVATAAERGGGKGERLAGALTDEGVATAFRAAMGRLMGLEADIVFRTIMEFV 906 D +L+ AGA+V PL LA + S I LL GGA++N + A D +TPLH+A V++LL+ G DE NN G+TP DVVG + + I +L AP ADR+W RRG+ +L R+ P RV + A+ +S S ISR N A R G+G T++ + R +GRL+GLEA+ +FR ++ F+ Sbjct: 295 DKGDAVRVLLGAGADVNVKGTNDSCATPLHLAVNRWMTSTGTICALLEGGANINARTAGD-DTPLHIACTRLRGSVVELLLRWGADEKLPNNDGDTPADVVGVLEQNDLDDEEREADNQRIHRMLARAP---ADRSWRRRGWLVLSRSCPTRVHI----------------ANGSSSSSSISRINGNSAKVA--RVSGQGSSRDDEETEDQMMVDLRDLVGRLVGLEAEGLFRLVVGFL 511
BLAST of mRNA_L-elsbetiae_contig1320.2497.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI) HSP 1 Score: 86.7 bits (213), Expect = 1.960e-14 Identity = 82/243 (33.74%), Postives = 112/243 (46.09%), Query Frame = 1 Query: 1 LHYAAKHRHPDSIDALVEAGADLEAEAGFGKGT--ALHIAAESPGCETTLLALLRHGAKVDPVRHGDKTPLLLAVEDDNVGVANLLVSAGAEVRA-------PLLLASESSRSDAMILTLLRGGADVNTKRASDGNTPLHLAAMT----GNFPFVDVLLKAGGDETTANNHGETPLDVVGRRKGTWWLIFGPPDYN-IRALLVNAPRDRADRAWSRRGFFMLCRAFPERVRLQLAPSQDDRVN 687 LH A ++ H ++ AL+ A D + L +AA+ G L A+L+HG V+ G T L +A ++ V ++LV AGA V P L A + +A L L + G+++ R G TPL +AA G VD+LL+ G DET N G T +VVG D +R LL NAP DRAW RRGF +LCRAF + R A S + N Sbjct: 75 LHLAVENGHLSTVKALLAADPDTSVRYRIWNRSYSVLDLAAQK-GDACVLRAILQHGVDVNRRTDG-YTSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPFLDACINHCHEAA-LALYKHGSNIEA-RDIRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDVERVRDLLENAP---VDRAWRRRGFLVLCRAFWIKARRLRAASSNASSN 310
BLAST of mRNA_L-elsbetiae_contig1320.2497.1 vs. uniprot
Match: A0A6H5JU78_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU78_9PHAE) HSP 1 Score: 82.4 bits (202), Expect = 2.660e-13 Identity = 84/293 (28.67%), Postives = 130/293 (44.37%), Query Frame = 1 Query: 76 EAGFGKGTALHIAAESPGCETTLLALLRHGAKVDPVRHGDKTPLLLAVE-----DDNVGVANLLVSAGAEVRAPLLLASESSRSDAMILTLLRGGADVNTKRASDGNTPLHLAAMTGNFPFVDVLLKAGGDETTANNHGETPLDVVGRRKGTWWLIFGPPDYNIRALLVNAPRDRADRAWSRRGFFMLCRAFPERVRLQLAPSQDDRVNDAPSAASSASDDSFISRENKKRVATA-----AERGGG------KGERLAGALTDEGVATAFRAAMGRLMGLEADIVFRTIMEFV 906 +AG +H+AA G + +LA++ G ++ + + + PLLLA+ ++ +L AGA++ A L TL + GA VN+K ++ T L A GN +LL GGDE ++ GET + +V ++ PP + LL AP+DRA W RRGF +L R P+RVRL + + P AA+ A++ + ++R +T GGG G R EG F +M L + VFR I+ F+ Sbjct: 105 QAGSNGNFPIHLAA-CHGLDEVVLAVVEKGIDLNCLNNKREIPLLLALLRIAACENKAAAIRVLFEAGADIEARL--------------TLFQLGAKVNSKE-NERITSLSSACSFGNHDAAGLLLSWGGDENAMDSEGETVVFMVMQQIAEAPASVRPPLERLSRLLARAPQDRA---WRRRGFLVLGRVHPDRVRLAV---------EIPPAAADATEQP--QQRPRRRASTGQVEVDGTNGGGGXTGASSGVRAGIEAVHEGTVAGFGGVSAWMMALTEEGVFRRIVGFL 367
BLAST of mRNA_L-elsbetiae_contig1320.2497.1 vs. uniprot
Match: D8LD22_ECTSI (MHC_I C-terminus family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD22_ECTSI) HSP 1 Score: 81.6 bits (200), Expect = 1.160e-12 Identity = 74/240 (30.83%), Postives = 114/240 (47.50%), Query Frame = 1 Query: 226 DNVGVANLLVSAGAEVRA----------PLLLA-SESSRSDAMILTLLRGGADVNTKRASDGNTPLHLAAMTGNFPFVDVLLKAGGDETTANNHGETPLDVVGRRK--GTWWLIFGPPDYNIRALLVNAPRDRADRAWSRRGFFMLCRAFPERVRLQLAPSQDDRVNDAPSAASSASDDSFISRENKKRVATAAERGGGKGERLAGALTDEGVATAFRAAMGRLMGLEADIVFRTIMEFV 906 D +L++AGA+V A PL +A S I LL GGADVN + D TPLH A + V++LL+ G DE ++ TP D++G G+ I +L AP ADR+W RR + +L R+ P RV++ + ++R + ++SS S N ++A + G GER T++ + R + RL+GLEAD +FR ++ F+ Sbjct: 293 DKGDAVRVLLAAGADVHAKTTDDHLRCAPLHIAVCGRVPSTGTIRALLEGGADVNVRDIED-RTPLHEACTYSSVAAVELLLRWGADEKLTDDGDVTPADMIGTSGDVGSDHGDIEADGQRIHQMLARAP---ADRSWRRRSWLVLSRSCPTRVKI----ANENRSGSSVGSSSS-------SNGNSTKLARFSGEDSGGGERE----TEDQMMVDLRGLVTRLVGLEADGLFRLVVGFL 513
BLAST of mRNA_L-elsbetiae_contig1320.2497.1 vs. uniprot
Match: A0A6H5JN84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN84_9PHAE) HSP 1 Score: 79.7 bits (195), Expect = 7.060e-12 Identity = 106/368 (28.80%), Postives = 142/368 (38.59%), Query Frame = 1 Query: 1 LHYAAKHRHPDSIDALVEAGADLEAEAGFGKGTALHIA----------AESPGCE--TTLLALLRHGAKVDP-----------------VRHG--------------------------DKTPLLLAVEDDNVGVANLLVSAGAEVRAPLLLASESSRSDAMILTLLRGGADVNTKRASDGNTPLHLAAMTGNFPF--------VDVLLKAGGDETTANNHGETPLDVVGRRKGTWWLIFGPPDYNIRALLVNAPRDRADRAWSRRGFFMLCRAFPERVRLQLAPSQDDRVNDAPSAASSASDDSFISRE---NKKRVATAAERGGGKGERLAGALTDEGVATAFRAAMGRLMGLEADIVFRTIMEFV 906 LH AA + D ID L+ AGA +EA K T L + S G + ++ LL+HGA DP VR G KT L +A EDDN L+SAGA A +N PLHLAA F +D+LL+ G DE N+ G TP+ V RR G + ++ + PRD+A W RRG+ +LCRA P RVRL + +DA + S + S +R +T+ G G G+L E +A A + +++GL D VFRTIMEFV Sbjct: 524 LHRAAMYNKVDGIDLLISAGAIIEAPDNH-KSTPLAVTFREAVYRWKKEHSCGLQDFAAMITLLKHGA--DPNIGNIQEGCPHSLLWYFVRCGCPISVFRELLAAGPNLDADTNVQTKRGKTALHMAAEDDNGVCIEALISAGAXXXXXXXX-----------XXXXXXXATIN---------PLHLAAARDQRDFGDSAVPTTIDLLLRWGADENAVNSAGRTPV-TVWRRNGYVHRLPAASRTSVPKMFHWIPRDKA---WRRRGWLVLCRALPNRVRL--------KADDAGTC--SGAGQSLRARRVGAGSGSCSTSVPPVGKAGGVPVGSLPREKIAGGLSALVAKVVGLHEDGVFRTIMEFV 854
BLAST of mRNA_L-elsbetiae_contig1320.2497.1 vs. uniprot
Match: A0A6H5JN15_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN15_9PHAE) HSP 1 Score: 76.3 bits (186), Expect = 8.570e-11 Identity = 88/299 (29.43%), Postives = 127/299 (42.47%), Query Frame = 1 Query: 46 LVEAGADLEAEAGFGKGTALHIAAESPGCETTLLALLRHGAKVDPVRHGDKTPLLLAVEDDNVGVANLLVSAGAEV-------RAPLLLASESSRSDAMILTLLRGGADVNTKRASDGNTPLHLAAMTGNFPFVDVLLKAGGDETTANNHGETPLDVVGRRKGTWWLIFGPPDYNIRALLVNAPRDRADRAWSRRGFFMLCRAFPERVRLQL-----APSQDDRVNDAPSAASSASDDSFISRENKKRVATAAERGGGKGERLAGALTDEGVATAFRAAMGRLMGLEADIVFRTIMEFV 906 L+ G +L+ A G T L ++ + P T LL HGA + T L A E++N L SAG R P LA+ S +++ LLR D R S T +D+LL+ G DE ++ G TPL V + T+ L + +++ + APRD+ W +RG+ +LCRAFP VRL+ P+ V A S S S + + R K +AG L+ A + +++GL D VFRTIMEFV Sbjct: 580 LLAVGPNLDVRADDGY-TPLTVSQDHPELFTELLL---HGADTNVQTKRGATALHKAAENNNGVCIEALTSAGTSTSIKDNDGRTPFQLAT-ICHSRSVMRMLLRSAHDRCDSRDSAMATT------------IDLLLRWGADENAVDSLGNTPLTVWRENESTYTLSWANKQ-SVKKIFKRAPRDKR---WRQRGWLVLCRAFPNSVRLKADSDGTCPAAGRSVRARSVRAGSWSGSSSVPPFGEARGGPVGPLPREKHGVIAGGLS---------ALVAKVVGLHEDGVFRTIMEFV 848 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1320.2497.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1320.2497.1 >prot_L-elsbetiae_contig1320.2497.1 ID=prot_L-elsbetiae_contig1320.2497.1|Name=mRNA_L-elsbetiae_contig1320.2497.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=303bp LHYAAKHRHPDSIDALVEAGADLEAEAGFGKGTALHIAAESPGCETTLLAback to top mRNA from alignment at L-elsbetiae_contig1320:1366..4187- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1320.2497.1 ID=mRNA_L-elsbetiae_contig1320.2497.1|Name=mRNA_L-elsbetiae_contig1320.2497.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2822bp|location=Sequence derived from alignment at L-elsbetiae_contig1320:1366..4187- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1320:1366..4187- >mRNA_L-elsbetiae_contig1320.2497.1 ID=mRNA_L-elsbetiae_contig1320.2497.1|Name=mRNA_L-elsbetiae_contig1320.2497.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1818bp|location=Sequence derived from alignment at L-elsbetiae_contig1320:1366..4187- (Laminarionema elsbetiae ELsaHSoW15)back to top |