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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 2948 |
| Cds size | 1650 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815497.2118013-UTR-L-elsbetiae_contig132:52311..52595 | 1622815497.2118013-UTR-L-elsbetiae_contig132:52311..52595 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig132 52312..52595 + |
| 1691682927.3152096-UTR-L-elsbetiae_contig132:52311..52595 | 1691682927.3152096-UTR-L-elsbetiae_contig132:52311..52595 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig132 52312..52595 + |
| 1622815497.2364402-UTR-L-elsbetiae_contig132:54245..55259 | 1622815497.2364402-UTR-L-elsbetiae_contig132:54245..55259 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig132 54246..55259 + |
| 1691682927.3334897-UTR-L-elsbetiae_contig132:54245..55259 | 1691682927.3334897-UTR-L-elsbetiae_contig132:54245..55259 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig132 54246..55259 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815497.223546-CDS-L-elsbetiae_contig132:52595..54245 | 1622815497.223546-CDS-L-elsbetiae_contig132:52595..54245 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig132 52596..54245 + |
| 1691682927.325021-CDS-L-elsbetiae_contig132:52595..54245 | 1691682927.325021-CDS-L-elsbetiae_contig132:52595..54245 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig132 52596..54245 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig132.2496.1 >prot_L-elsbetiae_contig132.2496.1 ID=prot_L-elsbetiae_contig132.2496.1|Name=mRNA_L-elsbetiae_contig132.2496.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=550bp
MPSKCTHGGCNKRSSYSTEGTVAVFCGEHKEGTVDVTKKRCGHPSCSKRP
SYGVEGCKTREFCAEHKKEGMVNVVNRRCSHPRCSKYPSYGVEGSKTAEF
CSEHKKEGTMNVKKRCGHLGCNRHPSCGVEGSKTAEFCAEHKKEGMVNVV
NKRRCGHPGCIKQPSYGVKGSETAEFCVEHKKESMVNVISRKRCGHPSCN
KKPSYGMEGSKTAEVCTEHKESMVEIANKRCGHPGCNKHPSYGIEGSKTK
EFCSAHRKEGMVNVNRRCGHPGCNKRPTYGVEGCKTREFCAEHKKEGMVN
VVNRRCGHSGCSKYPSCGVEGCKMAYFCTEHKKEGMVNVVSRRCGHPGCS
KYPSCGVEGSKTAEFCSEHKEGMMNVRKRCGHLGCNRHPSYGVEGSKTAE
FCSEHKEGTFNVTKKRCGHPGCNKQPSYGMDGGKAAEYCAQHAKEGMVST
ISGRVFVGMDTGNMNEHGDSPVGRVGEDRKRKDPSSLRVQAEVSLARKHA
KPANTPAAVKMERGALVPALPGAAEAVRCIETFSLWLASCRTTAGQLSD* back to topmRNA from alignment at L-elsbetiae_contig132:52312..55259+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig132.2496.1 ID=mRNA_L-elsbetiae_contig132.2496.1|Name=mRNA_L-elsbetiae_contig132.2496.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2948bp|location=Sequence derived from alignment at L-elsbetiae_contig132:52312..55259+ (Laminarionema elsbetiae ELsaHSoW15)
GGGACAGGCATCATGCTCCAGGCCTAGCTGAGGGAGATGCTCCTCGTAAG
AGGGTAGTCTACTGTAGTTGGCGGGTGCTCGGCCGATCTACTCAGTCACA
CTCGTGCTCAGAACCACTACTGCTGTTGTAGTGGCGGTTGCTCGGCGATC
CACTCAGTCACACTGGTGCTCAGACGAACCACGGGCTACGTCTGGTCATC
ACGTCTAGGCTATATAACGCACAGTGTTTCCTGAACGAGGAGGGAGAAGG
GTAGACTCTTCTGCCTTTCATTGGTCGCGAGGAGATGCCAAGCAAGTGTA
CCCATGGCGGTTGTAACAAGCGCTCGTCGTACAGTACGGAAGGTACGGTG
GCTGTATTCTGCGGTGAACACAAGGAGGGCACGGTAGATGTCACTAAAAA
GAGGTGCGGCCATCCTAGTTGCAGCAAGCGGCCGTCGTACGGCGTGGAAG
GCTGCAAGACGAGGGAGTTCTGCGCTGAACACAAGAAGGAGGGGATGGTG
AACGTCGTCAACAGGAGGTGCAGCCACCCTCGTTGCAGCAAATACCCGTC
GTACGGCGTGGAAGGCAGCAAGACGGCGGAGTTCTGCTCTGAGCACAAGA
AGGAGGGCACGATGAACGTCAAGAAGAGGTGCGGCCATCTTGGTTGCAAC
AGGCATCCATCGTGCGGCGTGGAAGGCAGCAAGACGGCGGAGTTCTGCGC
TGAACACAAGAAGGAGGGCATGGTGAACGTCGTCAACAAGAGGAGGTGCG
GCCACCCTGGTTGCATCAAGCAGCCGTCGTACGGCGTGAAAGGCAGCGAG
ACGGCGGAATTCTGCGTTGAACACAAGAAGGAGAGCATGGTTAACGTCAT
CAGCAGGAAGAGGTGCGGCCATCCTAGTTGCAACAAGAAGCCGTCGTACG
GCATGGAAGGTAGCAAGACGGCGGAGGTCTGTACTGAGCACAAGGAGAGC
ATGGTGGAAATCGCGAACAAGAGGTGTGGCCACCCTGGTTGCAACAAGCA
TCCGTCGTACGGCATCGAAGGTAGCAAGACGAAGGAATTCTGCTCTGCGC
ACAGGAAGGAGGGCATGGTGAACGTCAACAGGAGGTGCGGCCATCCTGGT
TGCAACAAGCGGCCGACGTACGGCGTGGAAGGCTGCAAGACGAGGGAGTT
CTGCGCTGAACACAAGAAAGAGGGCATGGTGAACGTCGTCAACAGGAGGT
GCGGCCATTCTGGTTGCAGCAAATACCCGTCGTGCGGCGTGGAAGGCTGC
AAGATGGCGTATTTTTGCACTGAACACAAGAAAGAGGGCATGGTGAACGT
CGTCAGCAGGAGGTGCGGCCACCCTGGTTGCAGCAAATACCCGTCGTGCG
GCGTGGAAGGCAGCAAAACGGCGGAGTTCTGCTCTGAACACAAGGAGGGC
ATGATGAACGTCAGGAAGAGGTGCGGCCATCTTGGTTGCAACAGGCATCC
GTCATACGGCGTAGAAGGCAGCAAAACGGCGGAGTTCTGCTCTGAACACA
AGGAGGGCACGTTCAATGTCACCAAGAAGAGGTGTGGCCACCCTGGTTGC
AACAAGCAGCCGTCGTACGGCATGGACGGGGGTAAGGCGGCGGAGTACTG
CGCTCAACATGCGAAAGAAGGCATGGTGAGCACAATATCGGGCAGAGTTT
TCGTTGGAATGGACACCGGCAATATGAATGAACACGGAGATTCACCCGTG
GGCCGTGTTGGAGAGGACAGGAAACGCAAGGACCCCTCCTCTCTCCGGGT
ACAAGCGGAAGTTTCCTTGGCGAGGAAGCACGCCAAGCCTGCCAACACCC
CTGCTGCAGTAAAGATGGAAAGGGGCGCATTGGTGCCTGCCTTGCCGGGT
GCCGCGGAAGCTGTGAGGTGCATTGAAACTTTCAGCTTGTGGTTGGCGAG
TTGTCGCACAACCGCCGGGCAACTGTCTGACTAATCCTATTTTACACTTT
GTAAAAGCGTGTGACCTGGGGTACGGCATATGTACGTGTTGGTGCCGGCC
GATCGCTGACCATAGCAGCGAACACGATGCCCTTCTGCACATGTCACGTC
AAGATACATACTTTAACCCCGAGGTATAGATGTTGCTGGTCTGTAAAACC
AAAGTAGTCCTGACGTGCTGATGAACATACCATTGAGAACTGCTGCGTCG
CCGGTGTCGACAAACGCATACATATTTGTGTTGTCTCTCGCCGGCGAATA
CACCGTACTTTGTGATACGACCAAACGCCAAGTGTGAAGCTGCAGCTACA
ACAATTGAAGTGTGGTCTATGCCACAAAAAGGGCATGTAGGAACTGTCGT
GCAAGTCTGATTGATGGGCGCCAGCTGTGTCGCATTCTTGTTTTTGACAG
TGTTATTGGAACTAAATTTCAAGGGGGCGCATATGCAGGAGGATTTCAAG
GGGGCGCATTCTGTCACGGCCAAAGGCACAGGGCCTCAGTATATCCACGC
ACAAAGCAGCCGATATCTCAGGTTGCAGGAAGTGATCCAAAACGCGACTT
TGAGGCTGTGTAGTAGGGATGTGTGGCTACAGAGCGGGCCAAAAATCTAG
GTGGTAGCTATTGCTGGGCATTTAGAGTTGCCATCGCAAAAAAATGATAG
GGAAGAGAGACGTAGAGTCGAAAAAAGAGAGCCAGCTGCGAGACAGACGA
GCACGATTCCTATACGAAACGCAGCTTCTTGATCCCTGAAGAGATCCATC
GCAAGACCGCGCACGTCGGCAAGAAGAGGGTCTCAGATGTGCAGAGCACC
CACTGAAATGAGCTAACTCGTTGCGTGGCAATTAGAGGAGCTGCTGCCGT
CTGCTGCTGCTGGCCTGGCCGAGGGCACCAACGTATGCGGGAAGGCAGCT
CTGATTCGACACTCACAGAGCGATTCTGAGTTTAAAATCTGCACCGGCAC
TAGCTATAAGCAAAATATCGCACCACCTCTAGTTTGTTTGGTCTGGGA back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig132:52312..55259+ >mRNA_L-elsbetiae_contig132.2496.1 ID=mRNA_L-elsbetiae_contig132.2496.1|Name=mRNA_L-elsbetiae_contig132.2496.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3300bp|location=Sequence derived from alignment at L-elsbetiae_contig132:52312..55259+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCCAAGCAAGTGTACCCATGGCGGTTGTAACAAGCGCTCGTCGTACAG
TACGGAAGGTACGGTGGCTGTATTCTGCGGTGAACACAAGGAGGGCACGG
TAGATGTCACTAAAAAGAGGTGCGGCCATCCTAGTTGCAGCAAGCGGCCG
TCGTACGGCGTGGAAGGCTGCAAGACGAGGGAGTTCTGCGCTGAACACAA
GAAGGAGGGGATGGTGAACGTCGTCAACAGGAGGTGCAGCCACCCTCGTT
GCAGCAAATACCCGTCGTACGGCGTGGAAGGCAGCAAGACGGCGGAGTTC
TGCTCTGAGCACAAGAAGGAGGGCACGATGAACGTCAAGAAGAGGTGCGG
CCATCTTGGTTGCAACAGGCATCCATCGTGCGGCGTGGAAGGCAGCAAGA
CGGCGGAGTTCTGCGCTGAACACAAGAAGGAGGGCATGGTGAACGTCGTC
AACAAGAGGAGGTGCGGCCACCCTGGTTGCATCAAGCAGCCGTCGTACGG
CGTGAAAGGCAGCGAGACGGCGGAATTCTGCGTTGAACACAAGAAGGAGA
GCATGGTTAACGTCATCAGCAGGAAGAGGTGCGGCCATCCTAGTTGCAAC
AAGAAGCCGTCGTACGGCATGGAAGGTAGCAAGACGGCGGAGGTCTGTAC
TGAGCACAAGGAGAGCATGGTGGAAATCGCGAACAAGAGGTGTGGCCACC
CTGGTTGCAACAAGCATCCGTCGTACGGCATCGAAGGTAGCAAGACGAAG
GAATTCTGCTCTGCGCACAGGAAGGAGGGCATGGTGAACGTCAACAGGAG
GTGCGGCCATCCTGGTTGCAACAAGCGGCCGACGTACGGCGTGGAAGGCT
GCAAGACGAGGGAGTTCTGCGCTGAACACAAGAAAGAGGGCATGGTGAAC
GTCGTCAACAGGAGGTGCGGCCATTCTGGTTGCAGCAAATACCCGTCGTG
CGGCGTGGAAGGCTGCAAGATGGCGTATTTTTGCACTGAACACAAGAAAG
AGGGCATGGTGAACGTCGTCAGCAGGAGGTGCGGCCACCCTGGTTGCAGC
AAATACCCGTCGTGCGGCGTGGAAGGCAGCAAAACGGCGGAGTTCTGCTC
TGAACACAAGGAGGGCATGATGAACGTCAGGAAGAGGTGCGGCCATCTTG
GTTGCAACAGGCATCCGTCATACGGCGTAGAAGGCAGCAAAACGGCGGAG
TTCTGCTCTGAACACAAGGAGGGCACGTTCAATGTCACCAAGAAGAGGTG
TGGCCACCCTGGTTGCAACAAGCAGCCGTCGTACGGCATGGACGGGGGTA
AGGCGGCGGAGTACTGCGCTCAACATGCGAAAGAAGGCATGGTGAGCACA
ATATCGGGCAGAGTTTTCGTTGGAATGGACACCGGCAATATGAATGAACA
CGGAGATTCACCCGTGGGCCGTGTTGGAGAGGACAGGAAACGCAAGGACC
CCTCCTCTCTCCGGGTACAAGCGGAAGTTTCCTTGGCGAGGAAGCACGCC
AAGCCTGCCAACACCCCTGCTGCAGTAAAGATGGAAAGGGGCGCATTGGT
GCCTGCCTTGCCGGGTGCCGCGGAAGCTGTGAGGTGCATTGAAACTTTCA
GCTTGTGGTTGGCGAGTTGTCGCACAACCGCCGGGCAACTGTCTGACTAA
ATGCCAAGCAAGTGTACCCATGGCGGTTGTAACAAGCGCTCGTCGTACAG
TACGGAAGGTACGGTGGCTGTATTCTGCGGTGAACACAAGGAGGGCACGG
TAGATGTCACTAAAAAGAGGTGCGGCCATCCTAGTTGCAGCAAGCGGCCG
TCGTACGGCGTGGAAGGCTGCAAGACGAGGGAGTTCTGCGCTGAACACAA
GAAGGAGGGGATGGTGAACGTCGTCAACAGGAGGTGCAGCCACCCTCGTT
GCAGCAAATACCCGTCGTACGGCGTGGAAGGCAGCAAGACGGCGGAGTTC
TGCTCTGAGCACAAGAAGGAGGGCACGATGAACGTCAAGAAGAGGTGCGG
CCATCTTGGTTGCAACAGGCATCCATCGTGCGGCGTGGAAGGCAGCAAGA
CGGCGGAGTTCTGCGCTGAACACAAGAAGGAGGGCATGGTGAACGTCGTC
AACAAGAGGAGGTGCGGCCACCCTGGTTGCATCAAGCAGCCGTCGTACGG
CGTGAAAGGCAGCGAGACGGCGGAATTCTGCGTTGAACACAAGAAGGAGA
GCATGGTTAACGTCATCAGCAGGAAGAGGTGCGGCCATCCTAGTTGCAAC
AAGAAGCCGTCGTACGGCATGGAAGGTAGCAAGACGGCGGAGGTCTGTAC
TGAGCACAAGGAGAGCATGGTGGAAATCGCGAACAAGAGGTGTGGCCACC
CTGGTTGCAACAAGCATCCGTCGTACGGCATCGAAGGTAGCAAGACGAAG
GAATTCTGCTCTGCGCACAGGAAGGAGGGCATGGTGAACGTCAACAGGAG
GTGCGGCCATCCTGGTTGCAACAAGCGGCCGACGTACGGCGTGGAAGGCT
GCAAGACGAGGGAGTTCTGCGCTGAACACAAGAAAGAGGGCATGGTGAAC
GTCGTCAACAGGAGGTGCGGCCATTCTGGTTGCAGCAAATACCCGTCGTG
CGGCGTGGAAGGCTGCAAGATGGCGTATTTTTGCACTGAACACAAGAAAG
AGGGCATGGTGAACGTCGTCAGCAGGAGGTGCGGCCACCCTGGTTGCAGC
AAATACCCGTCGTGCGGCGTGGAAGGCAGCAAAACGGCGGAGTTCTGCTC
TGAACACAAGGAGGGCATGATGAACGTCAGGAAGAGGTGCGGCCATCTTG
GTTGCAACAGGCATCCGTCATACGGCGTAGAAGGCAGCAAAACGGCGGAG
TTCTGCTCTGAACACAAGGAGGGCACGTTCAATGTCACCAAGAAGAGGTG
TGGCCACCCTGGTTGCAACAAGCAGCCGTCGTACGGCATGGACGGGGGTA
AGGCGGCGGAGTACTGCGCTCAACATGCGAAAGAAGGCATGGTGAGCACA
ATATCGGGCAGAGTTTTCGTTGGAATGGACACCGGCAATATGAATGAACA
CGGAGATTCACCCGTGGGCCGTGTTGGAGAGGACAGGAAACGCAAGGACC
CCTCCTCTCTCCGGGTACAAGCGGAAGTTTCCTTGGCGAGGAAGCACGCC
AAGCCTGCCAACACCCCTGCTGCAGTAAAGATGGAAAGGGGCGCATTGGT
GCCTGCCTTGCCGGGTGCCGCGGAAGCTGTGAGGTGCATTGAAACTTTCA
GCTTGTGGTTGGCGAGTTGTCGCACAACCGCCGGGCAACTGTCTGACTAA back to top
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