mRNA_L-elsbetiae_contig1319.2492.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1319.2492.1 vs. uniprot
Match: D8LBH4_ECTSI (COP9 signalosome complex subunit 6 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBH4_ECTSI) HSP 1 Score: 424 bits (1089), Expect = 1.030e-143 Identity = 222/252 (88.10%), Postives = 234/252 (92.86%), Query Frame = 1 Query: 1 MDVDAGVEEKKGEDREVPATAAVPAERTQKGKGEGDRNIMLHPLTVITISDHHTRVSMGGGAQEAGGRVIGLLFGSQNGLDVSIYDAMEVACTAVGADGLELNEALVEKQKDLYTAVYPMYEILGWYTVGTAVTELDLGIQRQMTKFNSAPLFLLMNPSPAQGSKELPVLIHESESHMLDGRSKSTFVQLAFQLETTQAEQISVEHVAKATPTDGVSSIDLHAGAVSTSLRTLLARIEILRRFLEETKKGRL 756 M+VDAGVEEKKGE+++VPATAA G+ NIMLHPLTVITISDHHTRVS GGGAQEAGGRVIGLLFGSQNG DVSIYDAMEVACTAVGA+GLELNEALVEKQK+LYTAVYPMYEILGWYTVGT VTELDLGIQRQMTKFNS+PLFLLMNPSPAQGSKELPVLIHESESHMLDG ++STFVQLAFQLETTQAEQISVEHVAKATPTDG+SSIDLHAGAVSTSLRTLLARIEILRRFLEETKKG + Sbjct: 5 MEVDAGVEEKKGEEQKVPATAA-------SAPGKKGNNIMLHPLTVITISDHHTRVSTGGGAQEAGGRVIGLLFGSQNGRDVSIYDAMEVACTAVGANGLELNEALVEKQKNLYTAVYPMYEILGWYTVGTEVTELDLGIQRQMTKFNSSPLFLLMNPSPAQGSKELPVLIHESESHMLDGVAQSTFVQLAFQLETTQAEQISVEHVAKATPTDGISSIDLHAGAVSTSLRTLLARIEILRRFLEETKKGNI 249
BLAST of mRNA_L-elsbetiae_contig1319.2492.1 vs. uniprot
Match: A0A6H5KLY7_9PHAE (JAB_MPN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLY7_9PHAE) HSP 1 Score: 322 bits (824), Expect = 1.490e-105 Identity = 167/193 (86.53%), Postives = 175/193 (90.67%), Query Frame = 1 Query: 1 MDVDAGVEEKKGEDREVPATAAVPAERTQKGKGEGDRNIMLHPLTVITISDHHTRVSMGGGAQEAGGRVIGLLFGSQNGLDVSIYDAMEVACTAVGADGLELNEALVEKQKDLYTAVYPMYEILGWYTVGTAVTELDLGIQRQMTKFNSAPLFLLMNPSPAQGSKELPVLIHESESHMLDGRSKSTFVQLAFQ 579 M+VDAGVEEKKGE++ VPATAA G+ NIMLHPLTVITISDHHTRVS GGGAQEAGGRVIGLLFGSQNG DVSIYDAMEVACTAVGA+GLELNEALVEKQKDLYTAVYPMYEILGWYTVGT VTELDLGIQRQMTKFNS+PLFLLMNPSPAQGSKELPVLIHESESHMLDG ++STFVQLAFQ Sbjct: 5 MEVDAGVEEKKGEEQNVPATAA-------SAPGKKGNNIMLHPLTVITISDHHTRVSTGGGAQEAGGRVIGLLFGSQNGRDVSIYDAMEVACTAVGANGLELNEALVEKQKDLYTAVYPMYEILGWYTVGTEVTELDLGIQRQMTKFNSSPLFLLMNPSPAQGSKELPVLIHESESHMLDGVAQSTFVQLAFQ 190
BLAST of mRNA_L-elsbetiae_contig1319.2492.1 vs. uniprot
Match: A0A835YT38_9STRA (JAB_MPN domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT38_9STRA) HSP 1 Score: 209 bits (532), Expect = 6.440e-60 Identity = 106/239 (44.35%), Postives = 159/239 (66.53%), Query Frame = 1 Query: 46 EVPATAAVPAERTQKGKGEGDRNIMLHPLTVITISDHHTRVSMGGGAQEAGGRVIGLLFGSQNGLDVSIYDAMEVACTAVGADGLELNEALVEKQKDLYTAVYPMYEILGWYTVGTAVTELDLGIQRQMTKFNSAPLFLLMNPSPAQGSKELPVLIHESESHMLDGRSKST-FVQLAFQLETTQAEQISVEHVAKATPTDGVSSIDLHAGAVSTSLRTLLARIEILRRFLEETKKGRLP 759 + ATAA K G+G +I LHPL +ITISDH+TRVS GGG +++G+LFG ++G ++ IYDA E+ VG + + L++A V KQ +LY AVYP Y++LGWY+VG D+ +Q+QM + P+F+L++P P + +K LPV +++SE G + +T FVQ +FQL+T QAEQI +EHVA++TP +G S+I+ HA ++TSL L +R+ +LRR+L + G +P Sbjct: 5 DAAATAAAEGAEESKSAGDGQLSIHLHPLAIITISDHYTRVSTGGGVPPRDAKILGVLFGERSGAEIGIYDASEIGYDVVGGE-IVLSQASVAKQVELYEAVYPTYKVLGWYSVGLEPCPSDIKLQQQMKTHCANPIFVLLDPEPPKDAKALPVTVYQSEDQAGGGGAAATVFVQGSFQLQTVQAEQIGMEHVARSTPAEGSSAIERHATTMTTSLTALASRLAVLRRYLVAVRGGDVP 242
BLAST of mRNA_L-elsbetiae_contig1319.2492.1 vs. uniprot
Match: A0A7S2B7N9_9STRA (COP9 signalosome complex subunit 6 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B7N9_9STRA) HSP 1 Score: 202 bits (514), Expect = 1.630e-57 Identity = 108/220 (49.09%), Postives = 146/220 (66.36%), Query Frame = 1 Query: 106 DRNIMLHPLTVITISDHHTRVSMGGGAQEAGGRVIGLLFGSQNGLDVSIYDAMEVACTAVGADGLELNEA-LVEKQKDLYTAVYPMYEILGWYTVGTAVTELDLGIQRQMTKFNSAPLFLLMNPSPAQGSKELPVLIHESESHM-LDGRSKSTFVQLAFQLETTQAEQISVEHVAKATPTDGVSSIDLHAGAVSTSLRTLLARIEILRRFLEETKKGRLP 759 +R I LHPL +ITISDH T + G + G +V+GLL+G Q GL+VSI DA E+ T +G DG+ + A V QKDLYT VY YE+LGWY+VG D+ + R+MTK+N +P FLLM+PSP + +LP+ ++ES+ M D FV FQL+T QAE+I++E +AKATPTDGV+S+DLH ++ SLRTL R + L FL+ TK G +P Sbjct: 23 ERKIFLHPLAIITISDHFTCIESGASVKPRGSKVLGLLWGKQQGLEVSIMDAQELHYT-LGDDGVPVITAEKVNSQKDLYTEVYKNYELLGWYSVGIDADGKDMAVHREMTKYNESPFFLLMHPSPDPEASDLPISLYESKMVMGADDTPTIVFVTSEFQLQTMQAERITMERIAKATPTDGVASLDLHINSLGASLRTLNLRFDALLAFLKATKAGEVP 241
BLAST of mRNA_L-elsbetiae_contig1319.2492.1 vs. uniprot
Match: A0A7S2BCI8_9STRA (COP9 signalosome complex subunit 6 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BCI8_9STRA) HSP 1 Score: 186 bits (473), Expect = 2.170e-51 Identity = 96/225 (42.67%), Postives = 144/225 (64.00%), Query Frame = 1 Query: 88 KGKGEGDRNIMLHPLTVITISDHHTRVSMGGGAQEAGGRVIGLLFGSQNGLDVSIYDAMEVACTAVGADGLELNEA-LVEKQKDLYTAVYPMYEILGWYTVGTAVTELDLGIQRQMTKFNSAPLFLLMNPSPAQGSKELPVLIHESESHMLDGRSKSTFVQLAFQLETTQAEQISVEHVAKATPTDGVSSIDLHAGAVSTSLRTLLARIEILRRFLEETKKGRLP 759 K + + LHPL +I +SDH+T + GG + G +V+GLL+G Q GL+VSI DAME+ + + A+G+ + EA V KDLY + ++LGWY+VG V E+D+ I R+MTK+N +P FLLMNP+P + +K+LP+ ++ESE H+++ FV FQL+T Q E+I AK +G +++DLH VS+SL+TL +R L ++LE TK G +P Sbjct: 24 KAAAASENKVFLHPLAIIGMSDHYTTIEAGGSLAKPGSKVLGLLWGRQQGLEVSIMDAMELGYS-LDANGVPVIEAEKVNGMKDLYLENFKDRDLLGWYSVGLEVVEMDMAIHREMTKYNESPFFLLMNPNPDEEAKDLPISLYESEMHVINDTPTMLFVTCEFQLQTMQMERIXXXXXAKEKAHEGEATLDLHMNTVSSSLKTLSSRASALVQYLEATKNGTVP 247
BLAST of mRNA_L-elsbetiae_contig1319.2492.1 vs. uniprot
Match: A0A7S2S2E8_9STRA (COP9 signalosome complex subunit 6 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2E8_9STRA) HSP 1 Score: 186 bits (471), Expect = 7.270e-51 Identity = 102/239 (42.68%), Postives = 157/239 (65.69%), Query Frame = 1 Query: 49 VPATAAVPAERTQKGKGEGDRNIMLHPLTVITISDHHTRVSMGGGAQEAGGRVIGLLFGSQNGLDVSIYDAMEVACTAVGADGLE-LNEALVEKQKDLYTAVYPMYEILGWYTVGTAVTELDLGIQRQMTKFNSAPLFLLMNPSPAQGSKELPVLIHESESHMLDGRSKSTFVQLAFQLETTQAEQISVEHVAKATPTDGVSSIDLHAGAVSTSLRTLLARIEILRRFLEETKKGRLPL 762 +PA A+ +E G E +R I LHPL ++ +SDH T + G + G +V+G+L+G Q GL VSI DA+E+A + A G+ ++ V +QK LY VY +E+LGWY+VG VT +D IQ++ TK+N +P FLL+ P P +K+LP+ ++ES+ ++ K TFV +FQL+TTQAE+I++E V+KA+ T GVSS+DLH +S+SLR+L +R +IL +L+ ++P+ Sbjct: 35 IPAMAS--SEPGTGGDPESNRKISLHPLAIVAVSDHCTGIQTGASTKPPGSKVLGILWGKQQGLQVSITDAVELAYE-LDAQGMPVIDPEAVNQQKSLYMEVYKGHEMLGWYSVGEEVTPVDGLIQQEFTKYNESPFFLLVQPVPDPEAKQLPLTLYESQWTQVNEEMKMTFVPCSFQLDTTQAERITMEAVSKASTTAGVSSMDLHVQELSSSLRSLASRTQILVSYLKAIADQQVPV 270
BLAST of mRNA_L-elsbetiae_contig1319.2492.1 vs. uniprot
Match: A0A7S4A6I1_9STRA (COP9 signalosome complex subunit 6 (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A6I1_9STRA) HSP 1 Score: 183 bits (464), Expect = 1.900e-50 Identity = 113/296 (38.18%), Postives = 166/296 (56.08%), Query Frame = 1 Query: 34 GEDREVP--ATAAVPAERTQKGKGEGD----RNIMLHPLTVITISDHHTRVSMGGGAQEAGGRVIGLLFGSQNGLDVSIYDAMEVACTAVGADGLELNEALVEKQKDLYTAVYPMYEILGWYTVGTAVTELDLGIQRQMTKFNSAPLFLLMNPSPAQGSKELPVLIHESESHMLDGRSKSTFVQLAFQLETTQAEQISVEHVAKATPTDGVSSIDLHAGAVSTSLRTLLARIEILRRFLEETKKGRLPLVAANLKHLQPAPDHGRRAVLRGVHAGVQRFPVSNIPGVGAEERWLRE 903 G R+ P A+ A T+KG+ R + LHPL ++ +SDH TRVS+GG Q AG V+GLLFG Q GL+V + DA+EV T + +++ +E+ K LYT VY +++GWY V A T L + + K+N +PLFLLM+P P Q +K+LP+ ++E+E H L K+ F + FQLETTQ E++++E VA+ TD +D H ++ TSL+TL AR+ LR +L + G + A DH ++LR + A R P G EE +LR+ Sbjct: 12 GPPRQPPHGCAASAHASATKKGRMAAAESTARTVALHPLAIVGVSDHFTRVSVGGSRQGAGSPVVGLLFGMQRGLEVDVVDAIEVHLT----EATKVDAQFLEQSKALYTEVYEDRDLVGWYAVAPAPTANHLALHEEFVKYNESPLFLLMDPQPQQDAKDLPIQVYETEVHDL----KTVFATVPFQLETTQTERVAMEAVAQTGCTDRELMLDTHVASLDTSLKTLAARVRALRDYLAAVRAGTV------------AADH---SLLRKLGALCDRLPSLKSDGA-FEEAFLRD 283
BLAST of mRNA_L-elsbetiae_contig1319.2492.1 vs. uniprot
Match: W7TEK2_9STRA (COP9 signalosome complex subunit 6 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TEK2_9STRA) HSP 1 Score: 177 bits (449), Expect = 3.280e-47 Identity = 107/287 (37.28%), Postives = 155/287 (54.01%), Query Frame = 1 Query: 58 TAAVPAERT----QKGKGEGDRNIMLHPLTVITISDHHTRVSMGGGAQEAGGRVIGLLFGSQNGLDVSIYDAMEVACTAVGADGLELNEALVEKQKDLYTAVYPMYEILGWYTVGTAVTELDLGIQRQMTKFNSAPLFLLMNPSPAQGSKE-----------LPVLIHESESHMLDGRSKSTFVQLAFQLETTQAEQISVEHVAKATPTDGVSSIDLHAGAVSTSLRTLLARIEILRRFLEETKKGRLPLVAANLKHLQPAPDHGRRAVLRGVHAGVQRFPVSNIPG 873 TAA ER+ ++ + R++ LHPL ++TI DH TRV +GG R++G+LFG QNGL VSI DA E+ +++ V ++K+L+ AV E++GWY+VG V DL I R MT++N +P FLL++P+ + G E LP + E+E HM+ G FV + F+L +AE+ISVEHV KA P + S +DLH V +SL L+AR++ + R L+ K G+ P PD R +LR V A R P + G Sbjct: 33 TAAAQEERSVVLEEEAGNKSGRHVALHPLALVTICDHCTRVKVGGSLLPVTSRILGILFGVQNGLQVSITDAFELQYEITENGSVKIPAGYVNEKKELFGAVNQGAEVMGWYSVGEHVLPGDLEIHRAMTEWNESPFFLLLSPAASPGGDEGGAAPGVKEGELPARVFETELHMMRGVPSMLFVPVPFRLTAAEAERISVEHVVKAAPLEAASWVDLHVDVVKSSLSALVARVKAILRLLQAVKTGQAP------------PD---RRLLRMVRALCDRLPAAGPSG 304
BLAST of mRNA_L-elsbetiae_contig1319.2492.1 vs. uniprot
Match: A0A8J2WWX0_9STRA (Trehalase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WWX0_9STRA) HSP 1 Score: 183 bits (464), Expect = 3.220e-46 Identity = 113/296 (38.18%), Postives = 166/296 (56.08%), Query Frame = 1 Query: 34 GEDREVP--ATAAVPAERTQKGKGEGD----RNIMLHPLTVITISDHHTRVSMGGGAQEAGGRVIGLLFGSQNGLDVSIYDAMEVACTAVGADGLELNEALVEKQKDLYTAVYPMYEILGWYTVGTAVTELDLGIQRQMTKFNSAPLFLLMNPSPAQGSKELPVLIHESESHMLDGRSKSTFVQLAFQLETTQAEQISVEHVAKATPTDGVSSIDLHAGAVSTSLRTLLARIEILRRFLEETKKGRLPLVAANLKHLQPAPDHGRRAVLRGVHAGVQRFPVSNIPGVGAEERWLRE 903 G R+ P A+ A T+KG+ R + LHPL ++ +SDH TRVS+GG Q AG V+GLLFG Q GL+V + DA+EV T + +++ +E+ K LYT VY +++GWY V A T L + + K+N +PLFLLM+P P Q +K+LP+ ++E+E H L K+ F + FQLETTQ E++++E VA+ TD +D H ++ TSL+TL AR+ LR +L + G + A DH ++LR + A R P G EE +LR+ Sbjct: 671 GPPRQPPHGCAASAHASATKKGRMAAAESTARTVALHPLAIVGVSDHFTRVSVGGSRQGAGSPVVGLLFGMQRGLEVDVVDAIEVHLT----EATKVDAQFLEQSKALYTEVYEDRDLVGWYAVAPAPTANHLALHEEFVKYNESPLFLLMDPQPQQDAKDLPIQVYETEVHDL----KTVFATVPFQLETTQTERVAMEAVAQTGCTDRELMLDTHVASLDTSLKTLAARVRALRDYLAAVRAGTV------------AADH---SLLRKLGALCDRLPSLKSDGA-FEEAFLRD 942
BLAST of mRNA_L-elsbetiae_contig1319.2492.1 vs. uniprot
Match: A0A5D6XJP9_9STRA (COP9 signalosome complex subunit 6 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJP9_9STRA) HSP 1 Score: 171 bits (434), Expect = 9.780e-46 Identity = 96/255 (37.65%), Postives = 150/255 (58.82%), Query Frame = 1 Query: 37 EDREVPATAAVPA-ERTQKGKGEGDRNIMLHPLTVITISDHHTRVSMGGGAQEAGGRVIGLLFGSQNGLDVSIYDAMEVACTAVGADGLELNEALVEKQKDLYTAVYPMYEILGWYTVGTAVTELDLGIQRQMTKFNSAPLFLLMNP--SPAQGSKELPVLIHESESHMLDGRSKSTFVQLAFQLETTQAEQISVEHVAKATPTDGVSSIDLHA--GAVSTSLRTLLARIEILRRFLEETKKGRLPLVAANLKHL 786 ED E+ T P +R ++ G G+R I LHPL ++ +DH TR G + +VIG LFG Q+GLDV++YD+ E+ V D ++L++ V + ++ V+P +E+LGWYTVG+ V DL R + +FN +PLF+L++P K+LPV + ESE HML+G FV+ F++ET++ E ISV+H++K P S LH G V +++ L ++++L RFL+ K G P+ L+H+ Sbjct: 2 EDTEMRGTDEEPVVQREERSSGGGERQIQLHPLVLMNAADHFTRERRGCAPGASPPQVIGALFGVQSGLDVAVYDSFELKYDVVNGD-VQLDKEFVTSRIQQFSQVFPGFELLGWYTVGSKVQPSDLATHRSIMEFNESPLFMLLDPVSKALNTKKKLPVTLFESELHMLNGAPTMLFVKAPFKIETSETEGISVDHISKIAPIGDSSKSSLHPYLGNVRDAMKMLDRQVDVLVRFLQAMKNGDAPMDRNLLRHI 255 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1319.2492.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1319.2492.1 >prot_L-elsbetiae_contig1319.2492.1 ID=prot_L-elsbetiae_contig1319.2492.1|Name=mRNA_L-elsbetiae_contig1319.2492.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=397bp MDVDAGVEEKKGEDREVPATAAVPAERTQKGKGEGDRNIMLHPLTVITISback to top mRNA from alignment at L-elsbetiae_contig1319:1008..5797+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1319.2492.1 ID=mRNA_L-elsbetiae_contig1319.2492.1|Name=mRNA_L-elsbetiae_contig1319.2492.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4790bp|location=Sequence derived from alignment at L-elsbetiae_contig1319:1008..5797+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1319:1008..5797+ >mRNA_L-elsbetiae_contig1319.2492.1 ID=mRNA_L-elsbetiae_contig1319.2492.1|Name=mRNA_L-elsbetiae_contig1319.2492.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2382bp|location=Sequence derived from alignment at L-elsbetiae_contig1319:1008..5797+ (Laminarionema elsbetiae ELsaHSoW15)back to top |