mRNA_L-elsbetiae_contig1316.2471.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1316.2471.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE) HSP 1 Score: 108 bits (270), Expect = 2.450e-21 Identity = 88/227 (38.77%), Postives = 110/227 (48.46%), Query Frame = 1 Query: 553 LEKAVELEHLAVVRVMIELGVDVNAVAPNGGWTALHFAVGK---IMVDMLVEAGADVEARDSVNGATPLNLQYPSGDEGPRIETVRALVDHGADVNTRDRHGNTPLHSIAGGIVNLGV---VDFLLRSGADETIINNNGETALDTAGAHPE------------RLRTLLVSAPVDRAWRRRGVLLLCVCRSRKDQLLSAERSQIVLATDVFKSSSIGPTGSVLGDEL 1179 L+ A + V+R +++ GVDVN G+T+LH A +D+LVEAGA VE D + TP + E AL HGA++ RD G TPL A GV VD LLR GADET +N +G TA + G H E R+R LL +AP DRAWRRRG+L+LC K + L A S S SIG SV G EL Sbjct: 160 LDFAAQKGDACVLRAILQHGVDVNR--RTDGYTSLHVAALNNRVAAIDVLVEAGAHVEVEDD-DDCTP----FLDACSNHCHEAALALFKHGANIEARDMRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDLERVRDLLENAPADRAWRRRGLLVLCRAFWIKSRRLRAASSSARGIGPRAMSVSIGVRVSVAGGEL 379
BLAST of mRNA_L-elsbetiae_contig1316.2471.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE) HSP 1 Score: 108 bits (271), Expect = 6.240e-21 Identity = 92/244 (37.70%), Postives = 115/244 (47.13%), Query Frame = 1 Query: 610 GVDVNAVAPNGGWTALHFAVG---KIMVDMLVEAGADVEARDSVNGATPLNLQYPSGDEGPRIETVRALVDHGADVNTRDRHGNTPLHSIAGGIVNLG---VVDFLLRSGADETIINNNGETALDTAGAHPE----------RLRTLLVSAPVDRAWRRRGVLLLCVCRSRKDQLLSAERSQIVLATDVFKSSSIGPTGSVLGDELASNGWAGVAVWLSG--------LEDGQEGIFRVIVGYL 1269 G DVNA N G TAL A +D+L EAGA++EA+ NG+TPL++ G R+ AL+ HGA V ++ TPLH +A + G +VD LLR GADET ++ NG TA D E R+R LL AP DRAWRRRG L+L ++ R+ A V K T S A WAGV L G + DG IF IVGYL Sbjct: 547 GGDVNAKV-NNGITALRVASAFDKAPAIDVLTEAGANIEAQ--ANGSTPLHVASQEG----RLAAGIALLRHGASVGKKNAAAQTPLHLVAAKAGSPGTAEMVDLLLRRGADETAVSENGHTAADMVVLKTEESDSLAEDVDRVRKLLARAPADRAWRRRGFLILSRAHYPGGRVQFGHRTSQAPAAGVAKR-----TRSSEEPSRAEIDWAGVVSMLMGDGVDPISLMGDGANLIFEKIVGYL 778
BLAST of mRNA_L-elsbetiae_contig1316.2471.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI) HSP 1 Score: 103 bits (258), Expect = 6.110e-20 Identity = 86/227 (37.89%), Postives = 109/227 (48.02%), Query Frame = 1 Query: 553 LEKAVELEHLAVVRVMIELGVDVNAVAPNGGWTALHFAVGK---IMVDMLVEAGADVEARDSVNGATPLNLQYPSGDEGPRIETVRALVDHGADVNTRDRHGNTPLHSIAGGIVNLGV---VDFLLRSGADETIINNNGETALDTAGAH------------PERLRTLLVSAPVDRAWRRRGVLLLCVCRSRKDQLLSAERSQIVLATDVFKSSSIGPTGSVLGDEL 1179 L+ A + V+R +++ GVDVN G+T+LH A +D+LVEAGA VE D + TP + E AL HG+++ RD G TPL A GV VD LLR GADET +N +G TA + G H ER+R LL +APVDRAWRRRG L+LC K + L A S +S S G S G EL Sbjct: 111 LDLAAQKGDACVLRAILQHGVDVNR--RTDGYTSLHVAALNNRVAAIDVLVEAGAHVEVEDD-DDCTP----FLDACINHCHEAALALYKHGSNIEARDIRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDVERVRDLLENAPVDRAWRRRGFLVLCRAFWIKARRLRAASSNASSNGPRVRSLSTGARISGAGGEL 330
BLAST of mRNA_L-elsbetiae_contig1316.2471.1 vs. uniprot
Match: D7FSI6_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSI6_ECTSI) HSP 1 Score: 101 bits (252), Expect = 1.920e-19 Identity = 73/198 (36.87%), Postives = 106/198 (53.54%), Query Frame = 1 Query: 562 AVELEHLAVVRVMIELGVDVNAVA-PNGGWTALHFAV---GKIMVDMLVEAGADVEARDSVNGATPLNLQYPSGDEGPRIETVRALVDHGADVNTRDRHGNTPLHSIAG----GIVNLGVVDFLLRSGADETIINNNGET--------ALDTAGAHPERLRTL--LVSAPVDRAWRRRGVLLLCVCRSRKDQLLSAER 1101 A +L H+ V++ +E GVD ++ A P GWTALH A V++L+EAGAD + +S+ G+ + + E E +R L+ +GAD N D +G+ PLH A G++ VVD LLR GA ET +N +G T A+ A ER L L AP DRAWRRRG +++ RS +++ + R Sbjct: 174 ATQLGHVGVIKAFLEHGVDASSQACPASGWTALHQAALDNQAEAVEVLLEAGADADV-ESLPGSPCYDTPLLAAAESMSNEALRVLLRNGADPNKPDDNGSMPLHLAAHEQTPGVME--VVDLLLRWGASETAVNKHGNTPAEVFQRLAIHRPDATEERAGALVLLARAPADRAWRRRGWVVMLRARSETERIAAQRR 368
BLAST of mRNA_L-elsbetiae_contig1316.2471.1 vs. uniprot
Match: A0A6H5JU40_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU40_9PHAE) HSP 1 Score: 92.8 bits (229), Expect = 2.380e-16 Identity = 82/238 (34.45%), Postives = 126/238 (52.94%), Query Frame = 1 Query: 586 VVRVMIELGVDVNAVAPNGGWTALHFAV--GKIMVDMLVEAGADVEARDSVNGATPLNLQYPSGDEGPRIETVRALVDHGADVNTRDRHGNTPLHSIAGGIVNLGVVDFLLRSGADETIINNNGETALDTA---GAHPERLRT---LLVSAPVDRAWRRRGVLLLCVCRSRKDQLLSAE-RSQIVLATDVFKSSSIGPTGSVLGDELA-SNGWAGVAVWLSGLEDGQEGIFRVIVGYL 1269 + R +++ G DVN + + A++ AV G + V +L++AGA V+ + +G L + + + + V+ L+ HGA+VN +D G + LH A + +VD LLR GADETI N + T D A H E R LL AP DRAWRRRG +LLC ++ +L E R+++ T +++ G T V D + SNG + + ++ L D +G+FR IV YL Sbjct: 195 MTRALLQHGADVNEL--DDYEIAINEAVRCGNV-VKLLLKAGALVDGHNDFHGLVLAPL-HAACNFSLSCDVVKVLLGHGANVNLQDSEGTSALHLTAVRFSSR-LVDLLLRHGADETINNGDSSTPADCARLKAGHQEASRPVLRLLGGAPADRAWRRRGRVLLCSTPPQQKRLGPGETRTKMTRVTAGDGAAARGGTSEVGSDAHSNSNGSSDFSSLMARLFDRPQGVFRKIVCYL 427
BLAST of mRNA_L-elsbetiae_contig1316.2471.1 vs. uniprot
Match: D7FLL7_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLL7_ECTSI) HSP 1 Score: 91.7 bits (226), Expect = 8.520e-16 Identity = 100/307 (32.57%), Postives = 130/307 (42.35%), Query Frame = 1 Query: 517 ADPSLECGDTL---PLEKAVELEHLAVVRVMIELGVDVNA--------------------------------VAPNGGWTALHFAV-----GKIMVDMLVEAGADVEARDSVNGATPLNLQYPSGDEGPRIETVRALVDHGADVNTR-DRHGNTPLHSIA----GGIVNLGVVDFLLRSGADETIINNNGETALDTAGA-----------HPERLRTLLVSAPVDRAWRRRGVLLLCVCRSRKDQLLSAERSQIVLATDVFKSSSIGPTGSVLGDELASNGWAGVAVWLSGLEDGQEGIFRVIVGYL 1269 AD ++ G T+ PL AV HLA+V ++E G D + G TALH A+ V MLV+A AD E + SV G TPL+ E R+ V AL+ + A V R D G+TPLH G+ +D LLR GADET N G T LD GA +R R LLV AP DR WRRRG L+ V RSR ++ A R + G ++A N +GV L+ LE E +FR ++G+L Sbjct: 196 ADVNVGLGKTMYETPLMLAVRRGHLAIVETLLEAGADCSLRQLEDYSXXXXXXXXXXXXXXXXXXXXXXXVDAQDRAGCTALHTAILFSDRAGPAVHMLVKARADTELK-SVGGWTPLHAAA----EHHRVNCVAALLQNNASVRNRFDATGDTPLHRACVEQREGLA--ASIDLLLRWGADETARNKRGRTPLDVLGATRTDNPHCSPDEVDRARLLLVRAPTDRRWRRRGWLV--VLRSRT--IVVAHRCAKGASDSGLSLCQARRNGKGARIDVAGNS-SGVVELLTELE--PEAVFRSVLGFL 488
BLAST of mRNA_L-elsbetiae_contig1316.2471.1 vs. uniprot
Match: D8LH19_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH19_ECTSI) HSP 1 Score: 90.1 bits (222), Expect = 2.670e-15 Identity = 88/273 (32.23%), Postives = 122/273 (44.69%), Query Frame = 1 Query: 520 DPSLECGDTL---PLEKAVELEHLAVVRVMIELGVDVNAVAPNGGWTALHFAV--GK-IMVDMLVEAGADVEAR----------DSVNGATPLNLQ-YPSGDEGPRIETVRALVDHGADVNTRDRHGNTPLHSIAGGIV---NLGVVDFLLRSGADETIINNNGETALD---TAGAHPERLRTLLVSAPVDRAWRRRGVLLLCVCRSRKDQLLSAERSQIVLATDVFKSSSIGPTGSVLGDELASNGWAGVAVWLSGLEDGQEGIFRVIVGYL 1269 DPS G +L PL+ A A+ R +++ G DV + G+TALH+A GK +++ LV AGAD+EAR DS G TPL++ + PR+ L+ GADVN D HG TPLH +A + +DF T + E L+ LL AP DRAWRRRG L+L R+ ++ E V+ V + + G G G V + GLE E +FR IVG++ Sbjct: 230 DPSARYGSSLKFSPLQLACSSREAAMTRALLKHGADVKS-CDGFGFTALHWAAYRGKPCVIEALVGAGADLEARSSQVWLPGHRDSHVGLTPLHIAAFFRRSNTPRMAL---LLQRGADVNAADGHGRTPLHIVAAAPATDSSAADIDFXXXXXXXXXXXXXXXXXXXXXVVTRSSSAEPLKRLLRRAPADRAWRRRGPLVLSRVRAERE-----EEDSRVVGGKVLRQGAECAGGDASGGRDVGGG---VLARVVGLE--AEEVFRAIVGFV 488
BLAST of mRNA_L-elsbetiae_contig1316.2471.1 vs. uniprot
Match: A0A6H5K6K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6K9_9PHAE) HSP 1 Score: 86.7 bits (213), Expect = 3.580e-15 Identity = 81/263 (30.80%), Postives = 115/263 (43.73%), Query Frame = 1 Query: 637 NGGWTALHFAVGKI---------MVDMLVEAGADVEARDSVNGATPLNLQYPSGDEGPRIETVRALVDHGADVNTRDRHGNTPLHSIAGGIVNLGVVDFLLRSGADETIINNNGET---------------ALDTAG----------AHPERLRTLLVSAPVDRAWRRRGVLLLCVCRSRKDQLLSAERSQIVLATDVFKSSSIGPTGSVLGDELASNG------------------WAGVAVWLSGLEDGQEGIFRVIVGYL 1269 +GG+TALH V I V +L+EAGADV+A+ + +G L Y I +RAL++ GA+VN RD TPLH +A ++ V+FLL GADE + + +GET D G A R+R +L AP DR+W RR L+L K Q+ + S + S G +G L E+ S W + V L GLE + +FR++VG+L Sbjct: 17 DGGYTALHCCVCDINEPVLDNGDTVRVLLEAGADVDAKTTGDGNCATPLHYAVNRRIAPIGAIRALLEGGANVNARDVFDQTPLH-VACARSSVNGVEFLLHWGADEKLTDLDGETPAGAIVDSEEETPPDVTDAPGENRGKDEAIEADQHRIRQMLARAPADRSWHRRRWLVLSRSCPTKVQISNTSSSSNI---------SSGSSGDGLSAEMVSVNCKDLGGDDKETEDQKTVNWRDLVVRLVGLE--ADVLFRLVVGFL 267
BLAST of mRNA_L-elsbetiae_contig1316.2471.1 vs. uniprot
Match: D8LCR2_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCR2_ECTSI) HSP 1 Score: 88.6 bits (218), Expect = 4.030e-15 Identity = 69/185 (37.30%), Postives = 100/185 (54.05%), Query Frame = 1 Query: 577 HLAVVRVMIELGVDVNAVAPNGGWTALHFAV--GKI-MVDMLVEAGADVEARDS------------VNGATPLNLQYPSGDEGPRIETVRALVDHG-ADVNTRDRHGNTPLHSIAGGIVNLGVV------DFLLRSGADETIINNNGETALD---TAGAHPERLRTLLVSAPVDRAWRRRGVLLL 1056 + A+ ++ +G DV +V N G++ALH+AV G+ +VD L+E GADVEAR S + G TPL+ G+ + L+ G A+ N +D HG++PLH + +N V D LLRSGADET + + T D ++ H L+ LL +AP DRAWRRRG L++ Sbjct: 173 NAAMTSALVGMGADVTSV-DNIGYSALHWAVRDGRSDVVDALIEVGADVEARTSRMISYYSDGGHCMKGMTPLHEAAYQGN----YPGMLVLLQKGRANANAQDEHGHSPLHILC---MNPQVCSAAACSDILLRSGADETATDEDRHTPADIMASSEGHNGWLQQLLANAPADRAWRRRGTLVM 349
BLAST of mRNA_L-elsbetiae_contig1316.2471.1 vs. uniprot
Match: D7G137_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G137_ECTSI) HSP 1 Score: 88.2 bits (217), Expect = 5.440e-15 Identity = 151/349 (43.27%), Postives = 190/349 (54.44%), Query Frame = 1 Query: 55 REFLPGAREKLLSLLEHEKGSSAAATASPHELLWSGVLGVVLEGAKAQNDWGLATALVKAGAEFGALDLHAAVEEDQQELAAALLASEASV--DAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASGADPSLECGDTLPLEKAVELEHLAVVRVMIELGVDVNAVAPNGGWTALHFAVGKIM---VDMLVEAGADVEARDSVNGATPLNLQYPSGDEGPRIETVRALVDHGADVNTRDRHGNTPLHSIAGGIVNLGVVDFLLRSGADETIINNNGETALDTAGAH---------PERLRTLLVSAPVDRAWRRRGVLLLC 1059 +E L G E++L L+ T PHE+ S L LE A A+ D GLA LV+AGA+ G + LH AV +A LL + ASV D + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L D L+ A + + ++R++I+ G++VN A G TALH+A +D+LV AGAD++AR+ ++G+ PL + ++ VV LLR GADETI+ G+TA D G ER R+LL AP DRAWRRRG+L+LC Sbjct: 16 KETLKGEEERVLDLMLD--------TRCPHEM--SEWLAAPLESAVARGDEGLAQKLVQAGAKIGGVALHEAVRRGHIAIAELLLENGASVHDDEDDYGTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTVRLNEFDMSFLDFAASSQDVEILRMLIDHGMEVNLAAAFG--TALHWAAKANRANAIDVLVGAGADIQARN-MSGSRPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKVGQRRGSVQVVGLLLRWGADETIVCKQGKTAADRIGTRRFPSTEPGDDERARSLLTRAPADRAWRRRGLLVLC 351 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1316.2471.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1316.2471.1 >prot_L-elsbetiae_contig1316.2471.1 ID=prot_L-elsbetiae_contig1316.2471.1|Name=mRNA_L-elsbetiae_contig1316.2471.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=417bp MASNYAATANQREFLPGAREKLLSLLEHEKGSSAAATASPHELLWSGVLGback to top mRNA from alignment at L-elsbetiae_contig1316:10782..13828+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1316.2471.1 ID=mRNA_L-elsbetiae_contig1316.2471.1|Name=mRNA_L-elsbetiae_contig1316.2471.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3047bp|location=Sequence derived from alignment at L-elsbetiae_contig1316:10782..13828+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1316:10782..13828+ >mRNA_L-elsbetiae_contig1316.2471.1 ID=mRNA_L-elsbetiae_contig1316.2471.1|Name=mRNA_L-elsbetiae_contig1316.2471.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2502bp|location=Sequence derived from alignment at L-elsbetiae_contig1316:10782..13828+ (Laminarionema elsbetiae ELsaHSoW15)back to top |