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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 278 |
| Cds size | 252 |
| Stop | 1 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815494.4652379-CDS-L-elsbetiae_contig13150:1312..1348 | 1622815494.4652379-CDS-L-elsbetiae_contig13150:1312..1348 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig13150 1313..1348 + |
| 1691682926.0978224-CDS-L-elsbetiae_contig13150:1312..1348 | 1691682926.0978224-CDS-L-elsbetiae_contig13150:1312..1348 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig13150 1313..1348 + |
| 1622815495.0107002-CDS-L-elsbetiae_contig13150:4062..4096 | 1622815495.0107002-CDS-L-elsbetiae_contig13150:4062..4096 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig13150 4063..4096 + |
| 1691682926.1068127-CDS-L-elsbetiae_contig13150:4062..4096 | 1691682926.1068127-CDS-L-elsbetiae_contig13150:4062..4096 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig13150 4063..4096 + |
| 1622815495.0226703-CDS-L-elsbetiae_contig13150:4770..4952 | 1622815495.0226703-CDS-L-elsbetiae_contig13150:4770..4952 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig13150 4771..4952 + |
| 1691682926.1158686-CDS-L-elsbetiae_contig13150:4770..4952 | 1691682926.1158686-CDS-L-elsbetiae_contig13150:4770..4952 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig13150 4771..4952 + |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815495.0335295-UTR-L-elsbetiae_contig13150:4952..4977 | 1622815495.0335295-UTR-L-elsbetiae_contig13150:4952..4977 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig13150 4953..4977 + |
| 1691682926.1282392-UTR-L-elsbetiae_contig13150:4952..4977 | 1691682926.1282392-UTR-L-elsbetiae_contig13150:4952..4977 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig13150 4953..4977 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig13150.2466.1 >prot_L-elsbetiae_contig13150.2466.1 ID=prot_L-elsbetiae_contig13150.2466.1|Name=mRNA_L-elsbetiae_contig13150.2466.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=84bp
SPCRTDSRSTTPARLRQRVAAPAATSASAGEEARARAPPAAAADAARSKE
RHPARINVGPRIKRRTTALCTMAQRRVPLLLLL* back to topmRNA from alignment at L-elsbetiae_contig13150:1313..4977+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig13150.2466.1 ID=mRNA_L-elsbetiae_contig13150.2466.1|Name=mRNA_L-elsbetiae_contig13150.2466.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3665bp|location=Sequence derived from alignment at L-elsbetiae_contig13150:1313..4977+ (Laminarionema elsbetiae ELsaHSoW15)
TCACCATGTCGAACGGACTCAAGATCAACGACGCCGGTAAGTGGCATATC
TCACTTCTTGGGGCGGCGCGTATACTAACTGACACGCACGCACGCCACGA
GCACGTATCTTTTCTGCTCTCTTCTCTCTAATCCGCCCCCTTGAGTAGTA
GGGGTTTGATGTGAGCCCTGCTTCCACGTTTGTCCGTGGGAAGGAGAGGG
GTGCGAGAGAATGGGTGCGAGAGAGCGGTGTTCTCTGGGCGTGTTTTCGG
ATAGATAGATACACCCTAGGATCCGTGTCTCTTTTGTCTATCCGTGTCTC
CTCTCGTCGTGGACATGGGTTGTTGAAGTTGTAACCGCAGCAAGAGAAGC
GATAGGTTGCATGTGTTGCGTGCGTTGCGTGTGCCACGCCCCTAGTTTAT
CTGGCACTCGAGAAAGGCCGGTAGTCTCAATTCTATCGGTCTCAAATTTG
TGTACGATCTTCCCAATCGAAAGTGGCCCATTTGGTGGCGGTACGAAGAG
ATAGAGTTGCTGCTGGGCCTGCCTGTAGTTTCGTGTCACACCTGCCGCAA
CATGTTTTTGTTTTTTTGCTCGTCACTATTCACATAGGAGTAATAAACAG
GAAACACCGGTGTGGAACGTCGAGTTTGCTTCGGGAAGGCGTTGTATAAA
TGTCAATTACTGTCGCATGCATTCTAGCGTCTGGTCTCTCTCTACCATTT
CCATAATAATCGACGTAGAATGCACCACGCACGAAGTAGGAGGTATGATG
CGTCATAGGCCCCCCTGCTGACATAGTCCTCGGCCAATCGGAAAAAATGA
AAACACCGACATTTTTTTATAGTTTTCCGACCGTTCGCTTGCCTGCCAGC
TTGCCTGTCTGTCTGCGTGCCTGCCTGCCTGCTCGCTTGTACAAATGTAC
ACAATCTGCGAAAGAGCTTCACGAAAAGTACCGATCGATGTGGAACTTGA
TGGATGTTCGCAATGTAGATACAATACGCCCACCCACCCGATTTTACCAG
TGTTTGGGTTCGTGGACGAGTCTTCCCTGAGATACGCGCAGGAACCAAAA
GAACGCGCGACACACCACCACACGCACTTCAACATGCATCGTAAGAAGTG
CTCTCCTCTCTTGGGCAACGCACATACATAATAGGAGTATGTAGATCATC
TCACAATCGGCATACTACCCGGACGTTTTAAGTGCAGCGCTCGCGGGGCA
TCTATAGTCTATATAATATATATATCATGTGTCAAAAGTTGTGATCGTAT
CTACACATAGACTATATGCAGTCATGCAAGAAAGGTCCCCCCCCTGAGGC
TCCCACACCCAGTACGCTGCCCTCTGCGGCGCTTGCCTTTCGTCGATTTT
TGATGCATGAAGAGTTCTTCAATCTCTTCTCAGACTTTCGTTTTTTTTTC
TTCGTTCACATTTTATTTCCGGCGCTCGAAGGACTCTCGCCATGAGGGGG
CATCTTGCATGAGCTCTGAACCGTGGTCCCATATAGATAACAAGGTTCCT
CTCCCTGAGGCTCCCCCCCCCCCCCCCCCCCCGGGTCTGGCGTGTCTTTT
TTTTTGTTTTTTTGGGGGGAAAATGTTTGGCGCTTGTTCCGTCTTGTGTG
NNNNNNNNNNTCCCCAAGGGGGGGGCTGTGGTGGGGGGTTGTGGCGGGGG
GCCCCTATGGGTGCCAACGCTCCCTCCCCCGGGGCCCCCCCCCCCCCCCC
CCTTGCGGTGCTTGCCTTTAAGTTTTTGAGTTTTTAGGCGAGAATAATTT
CGGCCGTCTCTGCCCTTAAGTGTACACACGAACTAGCGTTTGATCCACTT
GACAGGAACGAAAGCGAGAGAACAAATTCAGATCTTGTCAGGAAAAAGTA
GCTCAAGCCCGGGTGCTCGAACTCATGACCTGCTGCCTGCGATGTAGAAG
GTTTGCGGGGGTTACATTCCAACTAGACTCCCCAGACTGCTGCTGCTGTG
CATTAAAATTCCCTAAGCTCGCCAATTTCCGTCATTTTTTTCAAAAAGCC
AAAGGACCGTGACGTCGTGCACCGAAAAGTCCTTTCCGAATATGTACCCC
CCTCTTGACACAACCCCTTTTCAGCCCGCCCTGCAACGAAGTCGGAGCCG
CTTGTCAACAACAGTGTTTGGTTTGACACCGTGGAAATGACACGCCTCTA
AATAGATGGCAGTACCCCGCCGTGCCACGGAGAACCAAACTTTATTCTTG
TACGTATTTGTTTTTGTGGATTTGGTTCCGTCTCGGGGGGCGGGATGAGA
TGACCGCAAAATCAACGCAACGTCTTATGTAGCGACACTGCAGTCTTGAT
AGACTTCAGCACTTATAGAACTCTACAAGAGGGTTATACAAGATAACCAG
AGGGTGTATCCAGGGAGTGTGTCTCCCCGGTTGGTGATGTCGGCTTGACC
GGTTATATACTAGAGGGCTCCCACACTATTTATCTTTGACTTTTATCGCT
CCGCTGATCCTTTGGGTCCATTCTACTTTGGTGTATTGTACTTTTCTTAA
GTACTTTGCAAGTTAGCCTCTGACCATGAGAATCGACCGCATCAAGTGTA
CGGACATTAACAGTCATATAAGGAAGTACTGGGTGGAGAGATCGGAGCGG
TTTAAATGTGAAGACAACAACAACAACTCCACCGCTACGTTGCTTTCTAT
GAGGTGCGGCATGCACATACCTCGCCGCTTTTCAGCTTCTCTTGTTCCTG
TTCGAAATAACCCCACCACCTCCGTACGCCGCGCATTCTGTACTTCTCAG
GCTCGCCTCAGGCAGCGGGTGGCTGCCCCTGCGGGTGAGTGGAAATCCGT
TCGGCGTTTTTTTTCCCGTGAACCCACTCCGCGCGGGCGGGGTGGCAGGT
TGCGTACCACACGCTGTGCATTGGGGCTAGTTCCAAATGATCAAAACATA
TCTACCCATGTACAATGTACGGAGTGTGACACAGGCATCGTTTTTGCTAT
ATATTTTAGTTTTTTTTTGTCTTGTAACATCTTTGGGTGTATGTATCTAC
ACTGGATATACTTCTACATATTAACTCAGCCTCGGGTGGTCGGTAGGAGG
GGGGCTAAAAGCCCGTTGCCACCTCGCGCCGTCTGGGTGTTAAATCACTG
CTCGCTTGCGGGATATATATGGTTTCTCTGGACATGCGTACGATTTTCTT
GATTCATGGGAAGGGGTGGGGGGTGGTCGGGAGGAATCACTTGTGCCGTG
AGACCTTCCCTCCCGTCTTGACGTGCAGATTTTGGCCCCCAAGAGAGGTG
TTCCTCTCGCGCACAGGGCATGCCAACTAAAACTTTCTCTGCACTTCAGC
CACCGCGGAAGTCATGTCCGTCCGTGCTCGATCTATGTAGTGCTGTCCCC
GCGCTAAAATCTGCAACCGGCGTGTCTGTGATTGACATGATTTTTACACT
ACTACTACCGCTGCCCTTGTTTTGGCCGCGTTGCATGACGTGCTTTCGAA
ATCGGCAGCGACAAGTGCAAGTGCGGGGGAGGAGGCTCGTGCACGTGCAC
CGCCAGCGGCTGCTGCGGATGCGGCAAGAAGTAAAGAGCGCCACCCCGCT
CGCATCAACGTAGGGCCCAGGATCAAACGACGAACGACGGCACTATGCAC
AATGGCCCAGCGGCGTGTTCCTCTACTCTTATTGCTGTAGCTGGTTGAGG
CTAGTCGGCGTTGTT back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig13150:1313..4977+ >mRNA_L-elsbetiae_contig13150.2466.1 ID=mRNA_L-elsbetiae_contig13150.2466.1|Name=mRNA_L-elsbetiae_contig13150.2466.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=504bp|location=Sequence derived from alignment at L-elsbetiae_contig13150:1313..4977+ (Laminarionema elsbetiae ELsaHSoW15)
TCACCATGTCGAACGGACTCAAGATCAACGACGCCGTCACCATGTCGAAC
GGACTCAAGATCAACGACGCCGGCTCGCCTCAGGCAGCGGGTGGCTGCCC
CTGCGGGCTCGCCTCAGGCAGCGGGTGGCTGCCCCTGCGGCGACAAGTGC
AAGTGCGGGGGAGGAGGCTCGTGCACGTGCACCGCCAGCGGCTGCTGCGG
ATGCGGCAAGAAGTAAAGAGCGCCACCCCGCTCGCATCAACGTAGGGCCC
AGGATCAAACGACGAACGACGGCACTATGCACAATGGCCCAGCGGCGTGT
TCCTCTACTCTTATTGCTGTAGCGACAAGTGCAAGTGCGGGGGAGGAGGC
TCGTGCACGTGCACCGCCAGCGGCTGCTGCGGATGCGGCAAGAAGTAAAG
AGCGCCACCCCGCTCGCATCAACGTAGGGCCCAGGATCAAACGACGAACG
ACGGCACTATGCACAATGGCCCAGCGGCGTGTTCCTCTACTCTTATTGCT
GTAG back to top
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