prot_L-elsbetiae_contig1314.2462.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1314.2462.1
Unique Nameprot_L-elsbetiae_contig1314.2462.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length258
Homology
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BLAST of mRNA_L-elsbetiae_contig1314.2462.1 vs. uniprot
Match: D7FGT4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGT4_ECTSI)

HSP 1 Score: 56.6 bits (135), Expect = 1.730e-5
Identity = 74/247 (29.96%), Postives = 111/247 (44.94%), Query Frame = 0 
Query:    3 GESSGGRLRLDDSATTEVLIRDEDWLEAEGALRRVVNADSDCDSIY----ESFTGKDEENVTVEGEKVLAAIQTQTRAMELLKPG-TQNTS------EKRFTRSFWGGAAAYDRR--PAGRAGSARGSPLAAISDIPCVXXXXXXXXXXXXSSMFADTA--ESLSVRSKVGLFESTAPSLGGEETKLTNT---TGRMARHQRSSKSLPGNVLAHESTILAATSSTALSVAYEHVRLRRSRSFQAPAR 231
            GE     L LD SAT+EV++R ED +EA+GALRR+++ DSDC S+      S  G+      +EG+        Q + +E  KP  TQ         E+  TRS  G + A D    P    G ++    +A + +                   + TA  +S+SVR+K+ +FE TA S  GEE +  ++   T      Q   +SL     A E    A+   +    A E+  L R+ SF + +R
Sbjct:  707 GEKERSGLPLDSSATSEVVVR-EDGVEADGALRRMLDGDSDCGSVLPLQDNSMEGEKRPR-RLEGKHAQGGRILQEQQVERQKPARTQRVGAQVPGGEEGITRSPRGTSEARDSTDGPPDGGGQSKEPAASATTAVGACEVTSSTLGGTTPRDPKSPTALSKSVSVRAKIEMFERTARSAAGEEGRNRSSSLGTPAACHRQPLGRSLSAKASAREWAFSASVDRSQQRSAVENGGLARALSFSSSSR 951
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1314.2462.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FGT4_ECTSI1.730e-529.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1314contigL-elsbetiae_contig1314:19268..20523 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1314.2462.1mRNA_L-elsbetiae_contig1314.2462.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1314 18946..21055 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1314.2462.1 ID=prot_L-elsbetiae_contig1314.2462.1|Name=mRNA_L-elsbetiae_contig1314.2462.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=258bp
MTGESSGGRLRLDDSATTEVLIRDEDWLEAEGALRRVVNADSDCDSIYES
FTGKDEENVTVEGEKVLAAIQTQTRAMELLKPGTQNTSEKRFTRSFWGGA
AAYDRRPAGRAGSARGSPLAAISDIPCVRGSPLAAASEIPSSMFADTAES
LSVRSKVGLFESTAPSLGGEETKLTNTTGRMARHQRSSKSLPGNVLAHES
TILAATSSTALSVAYEHVRLRRSRSFQAPARASPPPMAMARTDARVTDDE
GWPSRGS*
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