mRNA_L-elsbetiae_contig13130.2459.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig13130.2459.1
Unique NamemRNA_L-elsbetiae_contig13130.2459.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13130.2459.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13130contigL-elsbetiae_contig13130:745..4587 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons5
Model size525
Cds size525
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13130.2459.1prot_L-elsbetiae_contig13130.2459.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig13130 745..4587 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815493.3956475-CDS-L-elsbetiae_contig13130:744..8641622815493.3956475-CDS-L-elsbetiae_contig13130:744..864Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13130 745..864 +
1691682925.4752314-CDS-L-elsbetiae_contig13130:744..8641691682925.4752314-CDS-L-elsbetiae_contig13130:744..864Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13130 745..864 +
1622815493.4157999-CDS-L-elsbetiae_contig13130:1337..13971622815493.4157999-CDS-L-elsbetiae_contig13130:1337..1397Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13130 1338..1397 +
1691682925.4858801-CDS-L-elsbetiae_contig13130:1337..13971691682925.4858801-CDS-L-elsbetiae_contig13130:1337..1397Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13130 1338..1397 +
1622815493.470066-CDS-L-elsbetiae_contig13130:2497..26011622815493.470066-CDS-L-elsbetiae_contig13130:2497..2601Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13130 2498..2601 +
1691682925.4975605-CDS-L-elsbetiae_contig13130:2497..26011691682925.4975605-CDS-L-elsbetiae_contig13130:2497..2601Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13130 2498..2601 +
1622815493.5273187-CDS-L-elsbetiae_contig13130:3684..37791622815493.5273187-CDS-L-elsbetiae_contig13130:3684..3779Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13130 3685..3779 +
1691682925.5089765-CDS-L-elsbetiae_contig13130:3684..37791691682925.5089765-CDS-L-elsbetiae_contig13130:3684..3779Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13130 3685..3779 +
1622815493.545981-CDS-L-elsbetiae_contig13130:4441..45871622815493.545981-CDS-L-elsbetiae_contig13130:4441..4587Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13130 4442..4587 +
1691682925.5179296-CDS-L-elsbetiae_contig13130:4441..45871691682925.5179296-CDS-L-elsbetiae_contig13130:4441..4587Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13130 4442..4587 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig13130.2459.1

>prot_L-elsbetiae_contig13130.2459.1 ID=prot_L-elsbetiae_contig13130.2459.1|Name=mRNA_L-elsbetiae_contig13130.2459.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=175bp
GNFDKAEGLFREALGINERAHGFKHPEVASCLNSLAALLQARGKYDDAEA
LFTRALQVDEACFGLEHPRVAAGLHNLAALLQAQGKHEESDRLQTRALQT
WEREYGPEHPKLAAFLNNQATLRLAQGKPDEAEALGIRALAIVEKAYGPV
HPELATCLNNLSALLHARRSDSSL*
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mRNA from alignment at L-elsbetiae_contig13130:745..4587+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig13130.2459.1 ID=mRNA_L-elsbetiae_contig13130.2459.1|Name=mRNA_L-elsbetiae_contig13130.2459.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3843bp|location=Sequence derived from alignment at L-elsbetiae_contig13130:745..4587+ (Laminarionema elsbetiae ELsaHSoW15)
GGTAATTTCGATAAGGCGGAAGGTCTGTTCAGAGAGGCTCTAGGGATCAA
CGAGCGGGCCCACGGCTTCAAGCACCCGGAGGTGGCGTCGTGCCTAAACA
GCCTCGCCGCTCTGTTGCAGGTGATCGCATCAAAATGTAAACAATGTAAA
CACGCACATACACACACATGGAGAGGGAGAAGTGAGAGGGAGAGAGAGAG
AGGGAGAACGAGGCCGGGGGGGGGGGGGAGGGGGGCAGAAGGAGATAAGA
GGGAGCGATGTGCAGGGCAGTGGCCGGTCCATTGCGGTCGTGTTTTGTTG
CTGGTGCGTGCTGTGCTGTGCTGGAGGGGGGTTTTTGTGTTCTGTTTTGC
ACGTGTTTCGTCAGTGTATCCCTTCTCGCTGTTGGTTCTTGGTTCTTCTC
CTCGGAGCGCACGATTCGCTGCCCCCCTGCTGGCTTCTCCTGCCTTGATG
CGAGAGAACGCCTACATATAGAACGCCGTACATCTCACCTCGCTCCATCT
CGCCCTTGACTGCTGCTTGCTTCCGTTTGTCCAATTGTGCACACGTGCAA
TGAACCCGCCGCCAACACGCAACCCCCACCACACTTCGCACAGGCCCGAG
GGAAGTACGACGATGCCGAGGCTCTCTTCACGAGGGCGCTACAAGTCGAC
GAGGTTTGTATGTATGTGCGAGGCATTTTGTTTTCTCTTTTTTCGTACGA
GGGTCCGAGCAAATTTAGAAGCAGCGTACCGGTTTGTGGGCGCTGCGTAA
TAACCGCAGGTACATATGGTACACATTTATGTTTTTCTTTCTAAATTAAG
TACCAGTTTTTTAGATTTTTCGAAGCGGCATGGTACTTTTTTTGTTGGGG
GGGGGGGGGGGCTACGTGGGGCGTGCTTTTGCTTACCTTCCCTAGTGCGA
TGCGAAGCGAGTGTTATCTCGTCTTGACGGTGCTTTCCTGTTTTTTTTTT
TGTGACGCCCCTCCTGGTGAGTACGATGCGAAAGAGCCTATTGTTTATCT
CCGTTTGTTGGTGGGTGGGGGGGTTTGTTTCCTCCAAATTCAAGGTGGTA
TGTACTCCTAGCAAGGCAGTCTGTGCTTTGTTTTCATGCTCTGCTGGGCT
CTGTGCCACGCCGTGCGACGCGCTGCCGTGGCGCGTTACGTGCGTTGCGA
GGTGCGCAACAGTTGCCTACTGGGGGTCTCGCTTCCTCTTGCACTAAGCG
CTGTCACCCTGTCGTGCATATCGTCAGCAGCTCAGGATAGCAGTCATGAC
GTATTGCTTCGTATCAGATCGTCTGTCGTAATTATGTTGAAGCCGGGGAC
CGCAGCTCTCTGCGTACATGTTGACATCTGCCTTGCTGCCATGGTGCGCC
ATGGTGCAGCCATGTTGGCATGTTTTTTAGGAACGAACACGACCGTCGCG
ATAATACGTCTGCTTGTAATTCTGTGCGTTGTCTCGTTCTTGATCATCAA
TCATGACTCCCTTCAGTTATGAGTATAATGTTATCATGTTTAATGTATCA
TGTCATACCATAATATCCCTTGAGAACACCCCGTGGTCTAAACAGTTTTC
AAAGCCGATGTGTCTCCGCATTGGTTGGGTTGCTGTTGTGGAGCGCGATG
TGCCCTTGAAGGATCCCGTCGAGATCTCTTCTCAAATACTATAACATTCT
TGTCAATCGTACCCTCACGGTTGATGTGGAGCAATACTGCTTTGAAAAAT
GCTTACACCCCGGGGCGTTCTCAAGGGATATTACGCGATGTTACTGGCGA
CAGGCGTGCTTCGGGTTGGAGCATCCTCGGGTGGCGGCGGGCCTGCACAA
CCTGGCGGCGCTGCTGCAGGCGCAGGGGAAGCACGAGGAATCCGACCGCC
TCCAGACGTGAGTGTCCACCTTGCATCCTGCCGCGCCGGGGAGGCTGCGC
CTTACATGTTGCGCCTTGTGTGTGTGTGTGTGTGTTTTGTTTTTCTTCTC
CCATTGTTGGCTTTCGTCGTGTGCTCCACTGGCCCCCTTCCTCCACTACG
ACTAGCTAGACGACCCAACCGGGATCACACAGGGGGGGGGGGGGGGGGGG
GGGGCCCCCCCCTGCTGTGCCTGCCTCAGATTTTTTTTTCGCGGGCGGGG
GTCAGCACCCCCCCCCCCCGCCACAAATGAAGTCGAAGTTTTNNNNNNNN
CCCCCCCCCCCCCCCGCCCCCGCCGGCCCCGCGGGCGGCGGGGGGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGACCCTCTCCTGCTGTGCC
TGCCTCAGATGTTTTTATCGCGAGCAGGGTTCAGCACTCCCCACCCTCGT
CAACAATGAAGTCGAAGTATTATTTACTAGCGAAATCGCTGGGGGTGTCT
GGCTCTCGCTCTCGGTCCCATCAGAGCGTGACCCCCCCCCCTCGCTTGAT
TTATACTTAGTATTCATCTGGGATGTTGAGTTTGTTGCTGGGTCTACAGC
AGACAGTGGTCCCAGTTTCTTTTCGATCAGTACACAGCAGTAGTGCACCT
CGGCTTTCCGGGTCTCAGGCACAAGGAATAGGCTACTTTAGTACGAACAT
GTTCAAACGGGGTGTGCTGAACAGGGGGGGCAGGCGTCGAATCGAAGTGT
CCAACGCGAGGGGGCGGGAGAGGGAGCCCCGAGACTGTTTCTCGTTTGCG
GTCGAAAATCGGCAATATTGCCACCTAAATTATTCATGATTTTTTTTGCA
TGATTTTTTTTTCTATGTATTTATTATCGACCGATGAAGCACTCTCGCAC
ACACAGTTCACGTATTTTTTTCCATTCATCGACCGGATGAAGCCCTCTCG
CGCGCCCGGACGACTATTACCGTACAACCGGCAACCCGGATTCCTTCCTT
TGCCAGATTTCGTCGCCCCTCCAAACTGTCCCCACCCACCCCCCAATCTA
TCAACCGGATCGACGGTGCCCCTCGGGATTGATTTCACAGGCGTGCTTTG
CAGACGTGGGAGCGGGAGTACGGTCCGGAGCACCCGAAGCTGGCGGCGTT
CCTCAACAACCAGGCCACGCTGCGTCTGGCGCAGGGTGAGTGAGGACTGC
ACGTACATACGTATACGGTACCTACCTTAGGCGGCCGCCGTTGGGGGTGG
TGTTGGTGGTGGTTGTCCCTTGCTGCTCGGTACGTACCTTAGGCCGCCGC
TGTTGGAGGAGGAGGGGGGGGGGGGGGGGGGGCTGCTATTGCTTGGTTTA
TAGAATTTTTGGTAGCTCTTTTTTGTTTGTTGGTTGTTTTTTTTTTTTGC
GGTGGGGGTTTNNNNNNNNNNGCGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGGGGGGGGGGGGGGTGGGGTTGGGTGCTGGGGGGGGGGGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGCTTGCTTTGCT
GCTCGATTGATTTTTGGCTCTTTCTGTGTTGATTCCTGGTTGTTGTTGTT
GCTCCTGATGGTTGTTGTTGTCGTTGTCGTTGTTGTTGTTGTTGTTGTTG
TTGTTTTTGTCGTCATTGGTGGTGATGGATGGACATGGTTGTCCAGGCGG
AATAACTGCCGCTACCGCTGTGCCGCTGCCGCTGTGCCGCTGCCGCAAAA
CTTGTTTCATGTATTTTTTTTATTTTTTCGTTTTGACACGCCACGCCCCC
ACCCGCGCCTTGGCCGTCTTCCACACATGATACATTACCACGCCCAGGCA
AGCCTGACGAGGCAGAGGCTCTCGGCATCCGCGCGTTGGCGATCGTGGAG
AAGGCGTACGGACCCGTGCACCCGGAGCTGGCAACATGCCTGAACAACCT
CAGCGCCTTGCTGCACGCGAGAAGGTCAGACAGCAGTCTCTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig13130:745..4587+

>mRNA_L-elsbetiae_contig13130.2459.1 ID=mRNA_L-elsbetiae_contig13130.2459.1|Name=mRNA_L-elsbetiae_contig13130.2459.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1050bp|location=Sequence derived from alignment at L-elsbetiae_contig13130:745..4587+ (Laminarionema elsbetiae ELsaHSoW15)
GGTAATTTCGATAAGGCGGAAGGTCTGTTCAGAGAGGCTCTAGGGATCAA
CGAGCGGGCCCACGGCTTCAAGCACCCGGAGGTGGCGTCGTGCCTAAACA
GCCTCGCCGCTCTGTTGCAGGGTAATTTCGATAAGGCGGAAGGTCTGTTC
AGAGAGGCTCTAGGGATCAACGAGCGGGCCCACGGCTTCAAGCACCCGGA
GGTGGCGTCGTGCCTAAACAGCCTCGCCGCTCTGTTGCAGGCCCGAGGGA
AGTACGACGATGCCGAGGCTCTCTTCACGAGGGCGCTACAAGTCGACGAG
GCCCGAGGGAAGTACGACGATGCCGAGGCTCTCTTCACGAGGGCGCTACA
AGTCGACGAGGCGTGCTTCGGGTTGGAGCATCCTCGGGTGGCGGCGGGCC
TGCACAACCTGGCGGCGCTGCTGCAGGCGCAGGGGAAGCACGAGGAATCC
GACCGCCTCCAGACGCGTGCTTCGGGTTGGAGCATCCTCGGGTGGCGGCG
GGCCTGCACAACCTGGCGGCGCTGCTGCAGGCGCAGGGGAAGCACGAGGA
ATCCGACCGCCTCCAGACGCGTGCTTTGCAGACGTGGGAGCGGGAGTACG
GTCCGGAGCACCCGAAGCTGGCGGCGTTCCTCAACAACCAGGCCACGCTG
CGTCTGGCGCAGGGCGTGCTTTGCAGACGTGGGAGCGGGAGTACGGTCCG
GAGCACCCGAAGCTGGCGGCGTTCCTCAACAACCAGGCCACGCTGCGTCT
GGCGCAGGGCAAGCCTGACGAGGCAGAGGCTCTCGGCATCCGCGCGTTGG
CGATCGTGGAGAAGGCGTACGGACCCGTGCACCCGGAGCTGGCAACATGC
CTGAACAACCTCAGCGCCTTGCTGCACGCGAGAAGGTCAGACAGCAGTCT
CTGAGCAAGCCTGACGAGGCAGAGGCTCTCGGCATCCGCGCGTTGGCGAT
CGTGGAGAAGGCGTACGGACCCGTGCACCCGGAGCTGGCAACATGCCTGA
ACAACCTCAGCGCCTTGCTGCACGCGAGAAGGTCAGACAGCAGTCTCTGA
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