prot_L-elsbetiae_contig13124.2456.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig13124.2456.1
Unique Nameprot_L-elsbetiae_contig13124.2456.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length57
Homology
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BLAST of mRNA_L-elsbetiae_contig13124.2456.1 vs. uniprot
Match: A0A6H5KKQ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKQ5_9PHAE)

HSP 1 Score: 62.4 bits (150), Expect = 5.590e-10
Identity = 35/61 (57.38%), Postives = 41/61 (67.21%), Query Frame = 0 
Query:    1 MAGSDLLVKPVVSEGATVASVYLPAPPPPGETEEGSS----SGTASLWYDVDTLEAVKGAG 57
            MAG+DLLVKPVV+EGATVA VY P         EG S    + TASLWYDV+TL+ V+  G
Sbjct:  116 MAGADLLVKPVVTEGATVADVYFPG------VAEGCSGTTTTSTASLWYDVETLQVVEVTG 170
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13124.2456.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KKQ5_9PHAE5.590e-1057.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013780Glycosyl hydrolase, all-betaGENE3D2.60.40.1180coord: 1..57
e-value: 2.4E-7
score: 32.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13124contigL-elsbetiae_contig13124:1350..1870 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13124.2456.1mRNA_L-elsbetiae_contig13124.2456.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig13124 1350..1876 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig13124.2456.1 ID=prot_L-elsbetiae_contig13124.2456.1|Name=mRNA_L-elsbetiae_contig13124.2456.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=57bp
MAGSDLLVKPVVSEGATVASVYLPAPPPPGETEEGSSSGTASLWYDVDTL
EAVKGAG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013780Glyco_hydro_b