mRNA_L-elsbetiae_contig1311.2450.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1311.2450.1
Unique NamemRNA_L-elsbetiae_contig1311.2450.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig1311.2450.1 vs. uniprot
Match: D8LNM0_ECTSI (Protein atp11, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNM0_ECTSI)

HSP 1 Score: 334 bits (857), Expect = 5.620e-111
Identity = 174/228 (76.32%), Postives = 190/228 (83.33%), Query Frame = 1 
Query:    1 AACSGTSMLWRPRVAAQALPRSGLNAGAPAARERPALTLVAAAQT----RYLSFSFPGPRKLGDITNLPLLEKEAKENIADIWAAYHDERPDSLGTVMPGDALADLQGRAKKCPMFILPVWRDDGHFMMLSQYQDTCFLLTYLEDYKVNPGGAQPYATISMYGDLVESKDLGLIRADITPNLTKKEVDRLVRLLIRFYSPHAHHHVEAFNLRPEEFDLEKMLQETPRE 672
            AAC G ++LW  R AA+  P S + A   AA+   A T   AA+     R LSFSFPGPRKL DITNLPLL KE KE+IADIW AYHDER DSLGTV+PGD+L  LQ +AKKCPMF+LPVWRD GHFMMLSQYQD CFLLTYLEDYKVNPGGAQPYATISMY DLV+SK LGLIRADITPNLTKKEVDRLVRLLIRFYSPHAHHHVEAFNLRP+EFDL+K+LQETPR+
Sbjct:    6 AACYGKTLLWS-RAAAR--PHSVVPA---AAKTMAAATGARAARVSQARRELSFSFPGPRKLEDITNLPLLAKEEKESIADIWTAYHDEREDSLGTVIPGDSLDGLQAKAKKCPMFVLPVWRDGGHFMMLSQYQDKCFLLTYLEDYKVNPGGAQPYATISMYNDLVDSKGLGLIRADITPNLTKKEVDRLVRLLIRFYSPHAHHHVEAFNLRPQEFDLDKLLQETPRD 227
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BLAST of mRNA_L-elsbetiae_contig1311.2450.1 vs. uniprot
Match: A0A836CMH7_9STRA (ATP11 protein-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMH7_9STRA)

HSP 1 Score: 185 bits (469), Expect = 1.610e-52
Identity = 92/183 (50.27%), Postives = 126/183 (68.85%), Query Frame = 1 
Query:  130 QTRYLSFSFPGPRKLGDITNLPLLEKEAKENIADIWAAYHDERPDSLGTVMPGDALADLQGRAKKCPMFILPVWR--DDGHFMMLSQYQDTCFLLTYLEDYKVNPGGAQPYATISMYGDLVESKDLGLIRADITPNLTKKEVDRLVRLLIRFY--SPHAHHHVEAFNLRPEEFDLEKMLQETP 666
            Q R+LSFS+PGPRKL +ITNLPLLEKE    ++DIW  +HD R D++G  + G  L +L  RAK+ PMFI PV R  D G+FM+L Q+Q + FLLT+L+DY+ NP GAQPY ++S++ DL ESK +GL+RAD+T  L++ E  R++ L+ R+Y  S   +  V AFN  P EF+ E  +   P
Sbjct:   47 QCRHLSFSYPGPRKLSEITNLPLLEKEEPAIVSDIWRQFHDARKDAIGATLSGAELQELLKRAKESPMFIFPVHRGADGGYFMLLCQFQGSHFLLTFLDDYRTNPSGAQPYMSVSLFSDLAESKGVGLVRADVTAQLSRAEGVRVLDLMQRYYIGSEELYGMVRAFNHAPAEFNFEVYMSTVP 229
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BLAST of mRNA_L-elsbetiae_contig1311.2450.1 vs. uniprot
Match: K3X797_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X797_GLOUD)

HSP 1 Score: 156 bits (395), Expect = 1.040e-41
Identity = 82/167 (49.10%), Postives = 104/167 (62.28%), Query Frame = 1 
Query:  148 FSFPGPRKLGDITNLPLLEKEAKENIADIWAAYHDERPDSLGTVMPGDALADLQGRAKKCPMFILPVWRDDGHFMMLSQYQDTCFLLTYLEDYKVNPGGAQPYATISMYGDLVESKDLGLIRADITPNLTKKEVDRLVRLLIRFYSPHA-HHHVEAFNLRPEEFDLE 645
            FS+P PR L  I  L LLE E++E I  IW  YH E+ DSL T +  +  A+L  RA   P F+ PV+R +G F M+ Q+QDTCFLLTYLE +K NPG A P  T+S+Y DLVE+K +GL+RAD+   L KKE   L+  L+  YS       V  FN  PE+FD E
Sbjct:   44 FSYPAPRSLQQIVKLELLENESQEQIRAIWENYHREKDDSLATTLASEQYANLVQRATASPFFLFPVYRKEGFFNMICQFQDTCFLLTYLEAFKENPGLAPPCLTVSLYDDLVENKQIGLLRADVINMLDKKESQVLLDQLVASYSDEKLFAWVHRFNHEPEQFDFE 210
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BLAST of mRNA_L-elsbetiae_contig1311.2450.1 vs. uniprot
Match: A0A7S2DR12_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DR12_9STRA)

HSP 1 Score: 154 bits (390), Expect = 1.960e-41
Identity = 80/178 (44.94%), Postives = 105/178 (58.99%), Query Frame = 1 
Query:  133 TRYLSFSFPGPRKLGDITNLPLLEKEAKENIADIWAAYHDERPDSLGTVMPGDALADLQGRAKKCPMFILPVWRDDGHFMMLSQYQDTCFLLTYLEDYKVNPGGAQPYATISMYGDLVESKDLGLIRADITPNLTKKEVDRLVRLLIRFYSPHAHHHVEAFNLRPEEFDLEKMLQETP 666
            +R LSFSFPGPR+L D+  LPLL+ E++E + +IW  YH ++   +  V         +  AKKCP+FI PV RD GHF+MLSQ Q+   LLTYLEDYK +P  A PY TIS++ D    K + L R DI   L+  E  RL+ L+  +Y       V AFN    EFD E  L++ P
Sbjct:   18 SRPLSFSFPGPRRLADVVKLPLLQDESRERVEEIWRTYHSKQDTCIADVWEAGEYKSFRALAKKCPLFIFPVRRDKGHFVMLSQVQEQHVLLTYLEDYKKDPVAAVPYLTISLFDDFAADKGIVLARGDICNTLSLDESQRLLGLMKTYYGGPRQEDVRAFN--KGEFDFEAHLRDCP 193
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BLAST of mRNA_L-elsbetiae_contig1311.2450.1 vs. uniprot
Match: A0A6G0WAK2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WAK2_9STRA)

HSP 1 Score: 153 bits (387), Expect = 6.650e-41
Identity = 80/178 (44.94%), Postives = 111/178 (62.36%), Query Frame = 1 
Query:  148 FSFPGPRKLGDITNLPLLEKEAKENIADIWAAYHDERPDSLGTVMPGDALADLQGRAKKCPMFILPVWR------DDGHFMMLSQYQDTCFLLTYLEDYKVNPGGAQPYATISMYGDLVESKDLGLIRADITPNLTKKEVDRLVRLLIRFYSPHAHHH-VEAFNLRPEEFDLEKMLQE 660
            F FP PR L  +  L  LEKEA + I  IW  YHD++ D++G V+  +    L  RAKKC  F+ PV+R      ++G+F +LSQ+QD CFLLT L+ Y+ NP  A P  T+S++ DLV SK+L LIR D+   L K E  +L+  LI+ Y   AH+  VE+FNL+P+EF  +  L+E
Sbjct:   16 FHFPSPRSLQSLVKLDELEKEAPDAIRRIWNDYHDDKTDAMGRVLTQNEFRTLVDRAKKCAFFVFPVYRVNKDTNEEGYFTVLSQFQDKCFLLTTLDAYRENPAQAPPCLTVSIFDDLVSSKELALIRGDVANLLDKDEASKLLDSLIQRYVNDAHYSTVESFNLKPQEFSFDAYLEE 193
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BLAST of mRNA_L-elsbetiae_contig1311.2450.1 vs. uniprot
Match: A0A662WBX2_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WBX2_9STRA)

HSP 1 Score: 152 bits (385), Expect = 2.210e-40
Identity = 77/176 (43.75%), Postives = 105/176 (59.66%), Query Frame = 1 
Query:  148 FSFPGPRKLGDITNLPLLEKEAKENIADIWAAYHDERPDSLGTVMPGDALADLQGRAKKCPMFILPVWRDDGHFMMLSQYQDTCFLLTYLEDYKVNPGGAQPYATISMYGDLVESKDLGLIRADITPNLTKKEVDRLV-RLLIRFYSPHAHHHVEAFNLRPEEFDLEK---MLQET 663
            FS+PG R L  +  L LLE E    I  IW  +H ++ D++ T +P D    L  RA   P F+ PV+R DG F ML Q+Q TCFL+TYLE +K NPG A P   +S+Y DL+E K+L L+RAD+   L K E   L+ +LL+ +     + HV+ FN +PE+FD E    +LQ T
Sbjct:   36 FSYPGARSLEQLVKLELLEDEQTPQIQSIWEQFHADKDDAVATTLPADQYQALVTRAASAPFFVFPVYRKDGFFNMLCQFQQTCFLVTYLEAFKENPGAAPPCVAVSLYDDLLEKKELALVRADVINMLDKTESQTLLDQLLVSYRDDQLYDHVDKFNNQPEQFDFEAYRLLLQST 211
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BLAST of mRNA_L-elsbetiae_contig1311.2450.1 vs. uniprot
Match: A0A5D6XXF6_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXF6_9STRA)

HSP 1 Score: 151 bits (381), Expect = 4.350e-40
Identity = 79/162 (48.77%), Postives = 98/162 (60.49%), Query Frame = 1 
Query:  148 FSFPGPRKLGDITNLPLLEKEAKENIADIWAAYHDERPDSLGTVMPGDALADLQGRAKKCPMFILPVWRDDGHFMMLSQYQDTCFLLTYLEDYKVNPGGAQPYATISMYGDLVESKDLGLIRADITPNLTKKEVDRLVRLLIRFYSPHA-HHHVEAFNLRPE 630
            FSFP PR L  I  L LLE E +  +  IW  YH E+ D+L T + G   A L  RA+  P F+ PV+R DG F M+ Q+QDTCFLLTYLE +K NP  A P  T+S++GDL ESKD+GL+RADI   L KKE   L+  L+  YS       V  FN  P+
Sbjct:   32 FSFPAPRSLQQIVRLELLENEPRARVQQIWEEYHHEKGDALATTLSGAEFAVLAERARASPFFVFPVYRKDGFFNMICQFQDTCFLLTYLEAFKENPALAPPCLTVSLFGDLAESKDVGLLRADIVNMLDKKESQVLLDQLLASYSDEKLFQWVHKFNHEPD 193
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BLAST of mRNA_L-elsbetiae_contig1311.2450.1 vs. uniprot
Match: A0A485KLM8_9STRA (Aste57867_8902 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KLM8_9STRA)

HSP 1 Score: 148 bits (374), Expect = 4.740e-39
Identity = 77/178 (43.26%), Postives = 108/178 (60.67%), Query Frame = 1 
Query:  148 FSFPGPRKLGDITNLPLLEKEAKENIADIWAAYHDERPDSLGTVMPGDALADLQGRAKKCPMFILPVWR------DDGHFMMLSQYQDTCFLLTYLEDYKVNPGGAQPYATISMYGDLVESKDLGLIRADITPNLTKKEVDRLVRLLIRFYSPHA-HHHVEAFNLRPEEFDLEKMLQE 660
            F FP PR L  +  L  L+KE+ + I  IW+ YH+E+ D++  V+  D L  L  RAKKC  F+ PV+R      + G F MLSQ+QD CFLLT L+ Y+ NP  A P  T+S++ DLVE+K+L L+R D+   L K E   L+  L++ Y  +  +  +EAFNLRP EF+ +  L E
Sbjct:    9 FHFPSPRSLQSLVKLADLQKESPDAIRRIWSEYHEEKSDAMARVLTADDLKTLMERAKKCAFFVFPVYRVNKDTNETGFFTMLSQFQDKCFLLTTLDAYRENPAQAPPCLTVSLFDDLVETKELALVRGDVANLLDKPEASALLDALLQRYVDNTLYDTIEAFNLRPHEFNFDAYLAE 186
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BLAST of mRNA_L-elsbetiae_contig1311.2450.1 vs. uniprot
Match: A0A024TLC0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TLC0_9STRA)

HSP 1 Score: 148 bits (373), Expect = 9.690e-39
Identity = 79/182 (43.41%), Postives = 104/182 (57.14%), Query Frame = 1 
Query:  148 FSFPGPRKLGDITNLPLLEKEAKENIADIWAAYHDERPDSLGTVMPGDALADLQGRAKKCPMFILPVWR------DDGHFMMLSQYQDTCFLLTYLEDYKVNPGGAQPYATISMYGDLVESKDLGLIRADITPNLTKKEVDRLVR-LLIRFYSPHAHHHVEAFNLRPEEFDLEKMLQETPRE 672
            F FP PR L  +  L  LEKE  + I  IW  YHD + D+LGT +    L  L  R KKC  F+ PV+R      ++G F MLSQ+QD CFLLT L+ Y+ NP  A P  T+S+Y DLV SK+L L+R D+   L K E   L+  LL R+        VEAFNL+P +F+ +  L E  ++
Sbjct:   24 FHFPSPRSLQSLVKLDDLEKETPDAIRRIWGEYHDAKTDALGTSLTATQLDTLTARGKKCAFFVFPVYRTNAETKEEGFFTMLSQFQDKCFLLTTLDAYRENPSQAPPCLTVSIYDDLVSSKELALVRGDVANVLDKPEASELLTALLARYVDDDLFKTVEAFNLKPHDFNFDAYLAECKKK 205
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BLAST of mRNA_L-elsbetiae_contig1311.2450.1 vs. uniprot
Match: A0A1V9YPU7_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YPU7_9STRA)

HSP 1 Score: 147 bits (370), Expect = 2.510e-38
Identity = 80/178 (44.94%), Postives = 105/178 (58.99%), Query Frame = 1 
Query:  148 FSFPGPRKLGDITNLPLLEKEAKENIADIWAAYHDERPDSLGTVMPGDALADLQGRAKKCPMFILPVWRDD------GHFMMLSQYQDTCFLLTYLEDYKVNPGGAQPYATISMYGDLVESKDLGLIRADITPNLTKKEVDRLVRLLIRFYSPHAHHH-VEAFNLRPEEFDLEKMLQE 660
            FSFP PR L  I  L  L +EA E+I  IW  +H ++ DS+   +  D    L  RAK CP F+LPV+R +      G F MLSQ+QD CFL+T L+ Y+ NP  A P  T+S++ DLV SKDL L+R D+   L K+E D L + L + Y   AH   V AFN RP+EF+ +  L E
Sbjct:   21 FSFPSPRSLQSIVKLETLAQEAPEDIRRIWTEFHADKTDSVAATLAKDEWEVLMERAKDCPFFVLPVYRRNQETNEVGFFTMLSQFQDKCFLVTTLDAYRENPAQAPPCLTVSIFDDLVASKDLALLRGDVANLLDKQEADVLFQALTKRYIDDAHFDMVHAFNKRPQEFNFDAYLAE 198
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1311.2450.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNM0_ECTSI5.620e-11176.32Protein atp11, mitochondrial n=2 Tax=Ectocarpus Ta... [more]
A0A836CMH7_9STRA1.610e-5250.27ATP11 protein-domain-containing protein (Fragment)... [more]
K3X797_GLOUD1.040e-4149.10Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A7S2DR12_9STRA1.960e-4144.94Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A6G0WAK2_9STRA6.650e-4144.94Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A662WBX2_9STRA2.210e-4043.75Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A5D6XXF6_9STRA4.350e-4048.77Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A485KLM8_9STRA4.740e-3943.26Aste57867_8902 protein n=1 Tax=Aphanomyces stellat... [more]
A0A024TLC0_9STRA9.690e-3943.41Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A1V9YPU7_9STRA2.510e-3844.94Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1311contigL-elsbetiae_contig1311:15697..21609 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score160.6
Seed ortholog evalue8.2e-37
Seed eggNOG ortholog36331.EPrPI00000015583
Preferred nameATPAF1
KEGG rclassRC00003,RC00011,RC00055,RC00060,RC00092,RC00181,RC00496,RC00523,RC00948
KEGG koko:K01874,ko:K07555,ko:K11423,ko:K21888
KEGG TC1.A.12.2.1
KEGG ReactionR01108,R03522,R03659,R03875,R03938,R04773,R04866,R04867
KEGG Pathwayko00053,ko00310,ko00450,ko00480,ko00970,ko01100,map00053,map00310,map00450,map00480,map00970,map01100
KEGG ModuleM00359,M00360
Hectar predicted targeting categorymitochondrion
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006996,GO:0007005,GO:0008150,GO:0009987,GO:0016043,GO:0022607,GO:0031974,GO:0033615,GO:0034622,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043461,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0051082,GO:0065003,GO:0070013,GO:0070071,GO:0071840
EggNOG free text desc.ATP11 protein
EggNOG OGs1MGS0@121069,KOG3281@1,KOG3281@2759
EC1.8.5.1,2.1.1.43,2.5.1.18,6.1.1.10
COG Functional cat.O
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko02000,ko03016,ko03029,ko03036
Ec32 ortholog descriptionProtein atp11, mitochondrial precursor
Ec32 orthologEc-08_006630.1
Exons5
Model size1283
Cds size654
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815492.3715425-UTR-L-elsbetiae_contig1311:15696..157171622815492.3715425-UTR-L-elsbetiae_contig1311:15696..15717Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1311 15697..15717 +
1691682925.027744-UTR-L-elsbetiae_contig1311:15696..157171691682925.027744-UTR-L-elsbetiae_contig1311:15696..15717Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1311 15697..15717 +
1622815492.4583015-UTR-L-elsbetiae_contig1311:21001..216091622815492.4583015-UTR-L-elsbetiae_contig1311:21001..21609Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1311 21002..21609 +
1691682925.0927024-UTR-L-elsbetiae_contig1311:21001..216091691682925.0927024-UTR-L-elsbetiae_contig1311:21001..21609Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1311 21002..21609 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815492.386379-CDS-L-elsbetiae_contig1311:15717..159031622815492.386379-CDS-L-elsbetiae_contig1311:15717..15903Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1311 15718..15903 +
1691682925.0410602-CDS-L-elsbetiae_contig1311:15717..159031691682925.0410602-CDS-L-elsbetiae_contig1311:15717..15903Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1311 15718..15903 +
1622815492.4000878-CDS-L-elsbetiae_contig1311:17402..175211622815492.4000878-CDS-L-elsbetiae_contig1311:17402..17521Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1311 17403..17521 +
1691682925.0530992-CDS-L-elsbetiae_contig1311:17402..175211691682925.0530992-CDS-L-elsbetiae_contig1311:17402..17521Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1311 17403..17521 +
1622815492.4182303-CDS-L-elsbetiae_contig1311:18330..184241622815492.4182303-CDS-L-elsbetiae_contig1311:18330..18424Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1311 18331..18424 +
1691682925.0660994-CDS-L-elsbetiae_contig1311:18330..184241691682925.0660994-CDS-L-elsbetiae_contig1311:18330..18424Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1311 18331..18424 +
1622815492.432469-CDS-L-elsbetiae_contig1311:20284..204071622815492.432469-CDS-L-elsbetiae_contig1311:20284..20407Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1311 20285..20407 +
1691682925.075665-CDS-L-elsbetiae_contig1311:20284..204071691682925.075665-CDS-L-elsbetiae_contig1311:20284..20407Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1311 20285..20407 +
1622815492.4460506-CDS-L-elsbetiae_contig1311:20869..210011622815492.4460506-CDS-L-elsbetiae_contig1311:20869..21001Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1311 20870..21001 +
1691682925.0847259-CDS-L-elsbetiae_contig1311:20869..210011691682925.0847259-CDS-L-elsbetiae_contig1311:20869..21001Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1311 20870..21001 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1311.2450.1prot_L-elsbetiae_contig1311.2450.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1311 15718..21001 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1311.2450.1

>prot_L-elsbetiae_contig1311.2450.1 ID=prot_L-elsbetiae_contig1311.2450.1|Name=mRNA_L-elsbetiae_contig1311.2450.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=218bp
MLWRPRVAAQALPRSGLNAGAPAARERPALTLVAAAQTRYLSFSFPGPRK
LGDITNLPLLEKEAKENIADIWAAYHDERPDSLGTVMPGDALADLQGRAK
KCPMFILPVWRDDGHFMMLSQYQDTCFLLTYLEDYKVNPGGAQPYATISM
YGDLVESKDLGLIRADITPNLTKKEVDRLVRLLIRFYSPHAHHHVEAFNL
RPEEFDLEKMLQETPRE*
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mRNA from alignment at L-elsbetiae_contig1311:15697..21609+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1311.2450.1 ID=mRNA_L-elsbetiae_contig1311.2450.1|Name=mRNA_L-elsbetiae_contig1311.2450.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5913bp|location=Sequence derived from alignment at L-elsbetiae_contig1311:15697..21609+ (Laminarionema elsbetiae ELsaHSoW15)
GCTGCTTGCTCAGGCACTTCAATGCTGTGGCGACCTCGTGTGGCAGCACA
AGCCCTCCCGCGCTCTGGATTGAATGCGGGTGCCCCAGCAGCAAGAGAAA
GACCCGCTTTAACTTTAGTAGCGGCTGCGCAGACGCGATATCTCAGCTTT
TCGTTCCCTGGACCTCGAAAGCTCGGTGACATCACCAACCTCCCGCTCTT
GGAAAAGGTGCGCCGAGGTGCCCGACATGTGTACTTACTTGTAGATGTGT
AGATACTGCTGTAGACGCCAAGCAGTCTAACCCAGTACACCCACAGCAGT
TTAGCGTCACGAAGGCGCAGCGAGCGTAAGTTAGTAGTATGCGAGCGTCT
GGGAGAGAGGGGGGCTTCGAACCCCGTGATTCTACACACGACCGGCGACG
CTCCCTCCTTGGTGAGGACAAGGAGTCCTGATATAAACGTGACTTCGAGG
CTGTGTAGTAGACATTTGTGACGTGGATACCATAGTAGAGAGGTGGCAAA
AAAATTGAGTGGTAGTGTTTGCACAGCATTTCGACTTGGCATCGAACAAA
TTGGAAGGGGAAGTGAGAGGAGAGTCGAAAAAGAGAGCCAGCTTCGAGAG
CGACTGAGCACGATTCCTATATCATACGAGACAAGCTTCTTGACCCTTGT
AGGAGGTTGCTCGCAAGACCACGCACATCGGCCAGAGCAGGGTCTCTGGT
ATGCAGAGCACCCACTGACTGTAGTAGCTGAATGCTGCACAGCTTTAGAC
TTGCTACTGCCGTCTGCTGCTGCTGGCCTGGCCGAGCGCACCAACATGTG
TCCAAAGGCAGCCCTAATTCGACACTCACAGAGCGATTCCAAGTCTAAAA
TCTGCACCGACGCTAACTTTGAGCGGTAGCTCGTATGTTCCATGGTTTGT
TTAGTTTCAGATGGGGTATGTGAGCTCGGGGAGCTGGCGCACTGGTGCCA
GCCAGGCCAGAAGAGGGCGTGGGCTTTAGGTGGGGGGGGATCTTAAATGC
GCGTGCTTTTTGATTGCGAGTCCCTGGCGTAGTTGTGATGGGTGCAAATC
ATCCCTACGCCGCGGCTAGAGCATCGGTTTGCTTCGTTATTTTCCCTAAA
CCCTAGAGAAGTACAGGAGCTACAAGCCTGTTATTTCCTCACCACCAGCA
CGGCACTTTGCGGCGACAACTCGAAGTAAAGGAGCGAAACAAGTACCCCC
TTTCAACATATGTTCACAATAACACTCACTTGCTTTGGTCGTCCGGAGCT
ACTCCCCGGCTAACCCCCCTGCCCCCAATATGTGTCCACTATTTTTACAT
GACGGTGCCCCCACCCCGCCCCTATGTACTATGTACATGGAGACCATGTG
CTCTGGATCCTACAGCAAGGACGGGAGTGCATCCCACCGATGACCGCTTG
ACTGACGGTTGGCTTTTGCCATAGGCACGCGCGGACTCGCTCTACAATAC
GTATCTTCGAGACACGGATCGACGAATCGATCAATCCTACCACCTCTGTT
TTTAAATCTCTATGTATAACGTATTTCAGACCCGAATCTATGAGTCCTCT
CAATTCTGTTTTAACGCACGTTCACAGAAGATATCTTCGAAACACGAATC
GACTACATACTTCTACATACATAAAAGTCATCTCAGCTCTGCTGGCTCCC
GGTCGTGATGATTGTCCCCCCCCCCCCTTCCCCCCCTACGACCACTACCA
CCAAAGGAGGCGAAGGAAAACATAGCAGACATCTGGGCGGCATACCACGA
TGAGCGACCGGACTCGTTGGGCACGGTCATGCCCGGAGACGCACTCGCCG
ATCTACAGGGCAGGGCAAAAAAGTGGTGAGTCGTGAGTGATGACCCGCAT
ACCTTTTATGTCCCTCTCTGAGGCAAGCAACAAGGCAGGATTAACAGAGC
AGCACCCAAGTAGCCGAACGTATGGGTCCATCGATTCAGCACACGCGCGC
ACACGTGCTGTTTCTGCCTGCTGTTATGTTGTCCGTCCATTGAGGTGAGG
GCTACGAACTTCCGCTTAGGGAGTGGTGCGCCGGTAACCATCGGCTGTTT
TTCGAGGGTCTACATAGCATGCACGTTACACGTTACACTACATAGTTTGG
CTCGGCCGTAGAATCCGGCTGGCATGATTCTAGTTGTATCGTATGGTTCT
GATACACTCTCGTAAAAACACCATTTGGCATTTGGAAATTTGGAAAATTC
GGTTCATGCCCGCACGGAGCTGAAGCGATGACGATCTTGATGACGATCTT
GATGACGATCTTGATGACGATCTTGATGACGATCTTGATGACGATCTTGG
TGACGATCTTGATGGCGATCTGACGATCTTGATGGTGATCTTGATGGCAA
TCGGGTGTGATGTGACGATGCCTCTCGATTTCAGTTTGATCAGGATTTGG
ATGTGACATCTACATGCATGCATGCATACATGTATAAAAACGAAGAATAC
ACGTAATGCCTGTTGTACATATTTCTTTAAAATCTATGTAACCGTCTATT
GTATGGGGTGCATATTTCTGCGAAATCGTCAGCGATTCAAATAAAAAATA
AAACTCGACCCTTGGAACCCCCCTACTTGCCGGTTTACGCCTGTTTTGGC
CCCCCTCCCTCCTGTTTGCGTCTCCCCCCGTCAGCCCGATGTTCATCCTG
CCTGTATGGCGAGACGACGGGCACTTCATGATGCTCTCTCAGTATCAAGA
CACGTGCTTCCTGCTCACCTATCTCGAGGTAACACAATGCGCTTTAGCCC
AGTGTGTACATACATACAATACTGCGCTGAAGTCTTACCTCAGGTGCCCT
TACATCTTGCCGGAGTTCGCTTTGTCCTGGTAAGTAGGTAGTGTCCAGCA
CTACTACTGTCAAGTCGTTGAGGGCTGTTGGTTTTTATGTTCCGACTTGA
CCCATCGTGCCATGGCGATCATCGCACCCGAAGCGCCGGTCAGGTACTTC
CACAATAGAACGACTTCTATGAAAATGGCGCTGCATAAGTACCGCGCCTC
CCAATTTCAATCTCTCACTTAAAAACGAAGAGTTATCAAAGTAAGTGTGG
TTGCAGCATATCACCGGGCGCGTGTTTGGTCGTGCACGAAGTACGGCACG
AATCGTGTACAACAGTGGCCACATGAAACAAACGCGGGAAGATGCAAACT
TGCGAGAAGGTACATAGGAGTATTAGACTATTAAATAGTGGAAGCTCGAT
CCAGCAACAACACCGTCTGCCAGCTGCTGCTCCATCGCCGTGAGGCTGTC
TAGTAAGTGCCATCGCGATGAGTGGCTACTGCTGTACGACAGTGTATATG
TGCCAGTGACCGGCACTGACTAGTGAGGTAGTGACAGGTGCACCAGGTGC
ACCTGCTGTATGTGCGTCTGGGATACTTTACCGCGCCCCGTGCCGTGTAC
ATACCTGGATCGTTGATTTGGTCGTGAAAATACAGACGGAGCCCCCGACA
CCGAGTATTCGAGAAAGAGGGTTGAATCGACTGTCGGGGCCACGGCTACG
AAGTAAGAGGGGATAGAGATGCCTCTCCGCTACGCGCAGATCCAAAATGT
GTCAAAATTAATGGAGAATTGGCGAATTTCGACTCGTCGGTGTTCCGAGT
CCCGCCTCCGCGAGCCATGAAAGACAAGACCGAGACCCGTTTTTGGGCAA
ATTTGATCGCTCCAACAAGCTCACACAACCCTTAGAATACCTATGCGCAC
CTACCCACGTCTTTTCGAGTCTGTATCTGTCTCTCTTGCGGAGCTTGCCG
AGTCAAAAAAATGGATGTGAGAGAACTCCCCGGCAGCTGGGCGAGTGAAT
GTGTTTTATCGTCGTGCACCTCACCCAAGAGATCGAGATTGAGCGCGAGG
CTTTGTACGAAGTAGGGACTGGTATGTATCCGAGCACCGCCAGAAGGAGA
GATCGTTTTATTCAGTAGGGAGGTAGGTATCTGCAAGTGGATGTGTGGCT
TCATTTGTTCCTGCTGGTTGACTAGAGTTCAGTGTGGGTTTCATAGATCT
GCCAACTCAAACCGCCACCGCTCCGTCAGTTCGACGAGGCGAGCCGTAAG
GCGTCGTGCCCCTGGGTCGGGATGGTTACGAGCGATGACCCGCGCGAGCA
GACGGCCTGTGGTTCCGTGTGCTTCGAGAAATTCAGCGGGGTCAAGAAGT
GGGTACGGGAGATGCGGGGTCGAAATTCCAAAGAGCTTTTTCAATTCCCG
AACCGGAAGCCCAATTAGAAATTGGGAACAATACAAGTAATGGCTCTTGG
TGTTTGATCGAGAAACTGACACACCCTTTGCACCGATGGCAATGACTGCG
CGGCACCTGTCCATCTGTTCACCTGCCTTTGAGGCCGTACTCGAGTTGAT
CCTAACGACGTTTTTTTTCCTTTCTGTTTTTCCTTCCATTATTGGCGTAT
TCGTCGTCTGCCCCACTGGCCCCCTCCCTCCACTACGACTAGCTAGACGA
CCCAACCGATGTATGCTCCGCTGATCTGACTATCTTATTGGAAGCATTTT
ACGAGCGTGAAGGGCTGGCTGTAGGTGTTATGCTGCTTCGTCAAATTATT
GATCCCGTCTGCCCTTTTTTTTCTCTTGTACCCGGCAGGACTACAAGGTT
AACCCCGGAGGCGCACAGCCATACGCTACGATCTCTATGTACGGCGATTT
GGTGGAGAGCAAGGATCTGGGCTTGATACGAGCGGACATCACGCCAAACC
TCACGAAAAAGGTGAGATGGTGGTTCAACACATGGCATACGCCGGTGCTG
CATTTTGGACCCAGCACGGGTACTTTCCTCTGTCGTTTTTTGTCGAAAAC
GAAATGTCAAGACAGCCGTTGCAGTTGCAGCAACGGCTTGTGGGAAAGCA
CTCGAACACTGGCTTTGTTTCGAATCGGTTTGTAGTGCAGCCGGCTGCGT
GCAAGAGACAAATCCTCCGACACCGTCGATTTCGTTACCTCGCAGAGAAT
ATGCTGCTGCTGCTGCAGACGTAATTTGGCCGACTATTTTGCGCCTTACC
ACATTTTGTCATATATAGTAATCTCTAGAGCGGCTGTGGTCTGTCATGCC
AACCACGACAACAAGGTGCCGTTTGATGGTGATCGCTCGAGTCACACTGC
ATCCTACGGATGTACGGAACCCCACATAAAACCCAACTATCGAATACCGG
GTGTTCATTGATGGTCGTTGCAGGAGGTGGACAGGCTGGTGCGACTGCTG
ATCCGGTTTTACTCCCCGCACGCGCACCACCACGTAGAGGCGTTCAATCT
GCGGCCGGAGGAGTTCGACCTAGAGAAAATGCTGCAGGAGACGCCGAGGG
AGTAATGACCTGCCTCGCGTAGGTAGACAGATAGCACAGGGCACGGCAGC
ATGTTGCACGATCCTTATCTTGTTGTTGCCGCCTTAAGCTAAGAAGGGAG
GGCAAGCCTGTCGGATACCGCTTCCTAGCTTTGCGCGTCTCCCGTAGGTA
GAACGGTGCGATTTGTGATGTGGATCGGATGGTATTGTTCTGCAGCGGTC
TAGATATTGCTATTCATTTGGTGCAACAGGAGCCGTCAAGACATGAAGAG
AGGGGGGGGGGGGGCTGACAGAGTTTGTCGGCAACACAATCAAACGATAC
AACGAGCCCAAGGATGTGGTCTTTGGCCGATTTGCTGATTTCAAAGCCAT
TTTTTCATTTTTTCACCGTTGTAGCGGAGGCTCCTTCCCAAAAATACTCC
GCTGAAGTCAGCCAAGTGGCTAGATAAATGTGGCACTCTTGCATCACCCT
TCGCGCGGGGGGACAACATATTTTGATAATTCAGCTCGCTCGCAGGCAGC
TATTGCCTCTTGAGACTCTTGAGCCCGTCAACCCGAGATCATGACTGCGA
AGGTGCAGGTTATATAGAAGCCGAAATCAAACCATCATAAAAGTAACCCG
ACGATTTTACTTT
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1311:15697..21609+

>mRNA_L-elsbetiae_contig1311.2450.1 ID=mRNA_L-elsbetiae_contig1311.2450.1|Name=mRNA_L-elsbetiae_contig1311.2450.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1308bp|location=Sequence derived from alignment at L-elsbetiae_contig1311:15697..21609+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCTGTGGCGACCTCGTGTGGCAGCACAAGCCCTCCCGCGCTCTGGATT
GAATGCGGGTGCCCCAGCAGCAAGAGAAAGACCCGCTTTAACTTTAGTAG
CGGCTGCGCAGACGCGATATCTCAGCTTTTCGTTCCCTGGACCTCGAAAG
CTCGGTGACATCACCAACCTCCCGCTCTTGGAAAAGATGCTGTGGCGACC
TCGTGTGGCAGCACAAGCCCTCCCGCGCTCTGGATTGAATGCGGGTGCCC
CAGCAGCAAGAGAAAGACCCGCTTTAACTTTAGTAGCGGCTGCGCAGACG
CGATATCTCAGCTTTTCGTTCCCTGGACCTCGAAAGCTCGGTGACATCAC
CAACCTCCCGCTCTTGGAAAAGGAGGCGAAGGAAAACATAGCAGACATCT
GGGCGGCATACCACGATGAGCGACCGGACTCGTTGGGCACGGTCATGCCC
GGAGACGCACTCGCCGATCTACAGGGCAGGGCAAAAAAGTGGAGGCGAAG
GAAAACATAGCAGACATCTGGGCGGCATACCACGATGAGCGACCGGACTC
GTTGGGCACGGTCATGCCCGGAGACGCACTCGCCGATCTACAGGGCAGGG
CAAAAAAGTGCCCGATGTTCATCCTGCCTGTATGGCGAGACGACGGGCAC
TTCATGATGCTCTCTCAGTATCAAGACACGTGCTTCCTGCTCACCTATCT
CGAGCCCGATGTTCATCCTGCCTGTATGGCGAGACGACGGGCACTTCATG
ATGCTCTCTCAGTATCAAGACACGTGCTTCCTGCTCACCTATCTCGAGGA
CTACAAGGTTAACCCCGGAGGCGCACAGCCATACGCTACGATCTCTATGT
ACGGCGATTTGGTGGAGAGCAAGGATCTGGGCTTGATACGAGCGGACATC
ACGCCAAACCTCACGAAAAAGGACTACAAGGTTAACCCCGGAGGCGCACA
GCCATACGCTACGATCTCTATGTACGGCGATTTGGTGGAGAGCAAGGATC
TGGGCTTGATACGAGCGGACATCACGCCAAACCTCACGAAAAAGGAGGTG
GACAGGCTGGTGCGACTGCTGATCCGGTTTTACTCCCCGCACGCGCACCA
CCACGTAGAGGCGTTCAATCTGCGGCCGGAGGAGTTCGACCTAGAGAAAA
TGCTGCAGGAGACGCCGAGGGAGTAAGAGGTGGACAGGCTGGTGCGACTG
CTGATCCGGTTTTACTCCCCGCACGCGCACCACCACGTAGAGGCGTTCAA
TCTGCGGCCGGAGGAGTTCGACCTAGAGAAAATGCTGCAGGAGACGCCGA
GGGAGTAA
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