prot_L-elsbetiae_contig13108.2447.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig13108.2447.1
Unique Nameprot_L-elsbetiae_contig13108.2447.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length163
Homology
BLAST of mRNA_L-elsbetiae_contig13108.2447.1 vs. uniprot
Match: A0A6H5JDH3_9PHAE (SMC_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDH3_9PHAE)

HSP 1 Score: 248 bits (632), Expect = 9.970e-76
Identity = 132/163 (80.98%), Postives = 141/163 (86.50%), Query Frame = 0
Query:    1 MHEANKAAYASVRGELRTLFGAICANKSADLVMAGPKLEDGLRLVVRNEHIQAAXXXXXXXXXXXX----VVERSPQELSGGQQALLGLALVLALSSYQAPPLCLLDEVDAALDETNQAAAARLVALTFRDGQALCVSHHAEFHRQSGHCVAVEMRDGVSSVR 159
            MHEAN+A YASVRGELR+LFGA+C NKSADLVMAGPKLEDG+RLVVRN + QA                 VVER+PQELSGGQQALLGLALVLALSSYQAPPLCLLDEVDAALDETNQAAAARLVALTFR+GQALCVSHHA+FHRQSGHCVAVEMRDGVS V+
Sbjct:  522 MHEANEACYASVRGELRSLFGALCHNKSADLVMAGPKLEDGIRLVVRNGNTQAVAAATITTTTPSSAVPAVVERAPQELSGGQQALLGLALVLALSSYQAPPLCLLDEVDAALDETNQAAAARLVALTFREGQALCVSHHADFHRQSGHCVAVEMRDGVSRVQ 684          
BLAST of mRNA_L-elsbetiae_contig13108.2447.1 vs. uniprot
Match: D7FQC9_ECTSI (SMC_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQC9_ECTSI)

HSP 1 Score: 244 bits (622), Expect = 5.890e-72
Identity = 144/170 (84.71%), Postives = 152/170 (89.41%), Query Frame = 0
Query:    1 MHEANKAAYASVRGELRTLFGAICANKSADLVMAGPKLEDGLRLVVRNEHIQAAXXXXXXXXXXXX-----------VVERSPQELSGGQQALLGLALVLALSSYQAPPLCLLDEVDAALDETNQAAAARLVALTFRDGQALCVSHHAEFHRQSGHCVAVEMRDGVSSVR 159
            MHEAN+A YASVRGELR+LFGA+C NKSADLVMAGPKLEDGLRLVVRN + QA XXXXXXXXXXXX           VVER+PQELSGGQQALLGLALVLALSSYQAPPLCLLDEVDAALDETNQAAAARLVALTFR+GQALCVSHHA+FHRQSGHCV VEMRDGVS V+
Sbjct:  996 MHEANEACYASVRGELRSLFGALCRNKSADLVMAGPKLEDGLRLVVRNGNTQAXXXXXXXXXXXXXXXXXXXXAVAGVVERAPQELSGGQQALLGLALVLALSSYQAPPLCLLDEVDAALDETNQAAAARLVALTFREGQALCVSHHADFHRQSGHCVPVEMRDGVSRVQ 1165          
BLAST of mRNA_L-elsbetiae_contig13108.2447.1 vs. uniprot
Match: A0A836CK59_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK59_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 3.310e-20
Identity = 69/186 (37.10%), Postives = 84/186 (45.16%), Query Frame = 0
Query:    1 MHEANKAAYASVRGELRTLFGAICANKSADLVMAGPKLEDGLRLVVRNEHIQAAXXXXXXXXXXXXVVE--------------------------RSPQELSGGQQALLGLALVLALSSYQAPPLCLLDEVDAALDETNQAAAARLVALTFRDGQALCVSHHAEFHRQSGHCVAVEMRDGVSSVRP 160
            M  AN A YA+VRGE R L  A+   K+ADL+    +      +        A             + +                          +S +ELSGGQQ+LLGLA V ALS+Y A PL LLDEVDAALD  NQ   A L+   FR  Q LCVSHHA     +   V V M  G S + P
Sbjct: 1116 MEAANAACYAAVRGEFRRLLSALMPTKAADLLRDAARHALAFTVTNLTSSSSAQRDAPAAVHDAMDISDDEXXXXXXXXXXXXXXXXXXXXXXXXKSARELSGGQQSLLGLAFVFALSAYHAAPLYLLDEVDAALDAANQRRVAALLPRAFRGAQVLCVSHHAATQALATRRVRVAMEKGSSRIVP 1301          
BLAST of mRNA_L-elsbetiae_contig13108.2447.1 vs. uniprot
Match: F0WC70_9STRA (Chromosome segregation protein Smc putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WC70_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 2.040e-16
Identity = 50/132 (37.88%), Postives = 74/132 (56.06%), Query Frame = 0
Query:    5 NKAAYASVRGELRTLFGAICANKSADLVMAGPKLEDGLRLVVRNEHIQAAXXXXXXXXXXXXVVERSPQELSGGQQALLGLALVLALSSYQAPPLCLLDEVDAALDETNQAAAARLVALTFRDGQALCVSHH 136
            N+ A+ S+    + +F     +K A + + G K+E G+   V+++                  + +S +E+SGGQ ALLG++ + AL+S  A PLC+LDE+DAALDE NQA  A L A  F   Q +CVSHH
Sbjct:  351 NQLAFESIARRFQQIFEQAIPSKRAIMALRGEKVELGIEFRVQDQSSN---------------LTKSTKEMSGGQLALLGMSYIFALASCSASPLCILDEIDAALDEQNQAIIASLAASNFSSIQVICVSHH 467          
BLAST of mRNA_L-elsbetiae_contig13108.2447.1 vs. uniprot
Match: A0A024GMI1_9STRA (SMC_N domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GMI1_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 2.570e-16
Identity = 43/92 (46.74%), Postives = 58/92 (63.04%), Query Frame = 0
Query:   70 RSPQELSGGQQALLGLALVLALSSYQAPPLCLLDEVDAALDETNQAAAARLVALTFRDGQALCVSHHAEFHRQSGHCVAVEMRDGVSSVRPQ 161
            ++   LSGGQ ALLG++ + AL+S  A PLC+LDE+DAALDE NQ   A L A  FR  Q +CVSHH   H ++   + V  +D  S++  Q
Sbjct: 1220 KATNTLSGGQLALLGMSYIFALASCSAIPLCILDEIDAALDEQNQENVAALAASNFRSIQVICVSHHKAMHNKAQQLIQVRKKDTTSAITRQ 1311          
BLAST of mRNA_L-elsbetiae_contig13108.2447.1 vs. uniprot
Match: K1KGT9_9BURK (Chromosome partition protein Smc n=3 Tax=Sutterella TaxID=40544 RepID=K1KGT9_9BURK)

HSP 1 Score: 64.7 bits (156), Expect = 4.270e-9
Identity = 40/87 (45.98%), Postives = 50/87 (57.47%), Query Frame = 0
Query:   73 QELSGGQQALLGLALVLALSSYQAPPLCLLDEVDAALDETNQAAAARLVALTFRDGQALCVSHHAEFHRQSGHCVAVEMRD-GVSSV 158
            ++LSGG+QAL   ALV A+      P CLLDEVDA LDE NQA  A L      + Q L ++HH      +G  V V M++ GVS V
Sbjct: 1076 KQLSGGEQALAATALVFAIFRLNPAPFCLLDEVDAPLDEANQARLAGLCRRMSSETQFLMITHHRVTMEFAGALVGVTMKEPGVSRV 1162          
BLAST of mRNA_L-elsbetiae_contig13108.2447.1 vs. uniprot
Match: A0A1Z9NKY0_9GAMM (AAA domain-containing protein n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1Z9NKY0_9GAMM)

HSP 1 Score: 64.3 bits (155), Expect = 5.490e-9
Identity = 40/86 (46.51%), Postives = 51/86 (59.30%), Query Frame = 0
Query:   74 ELSGGQQALLGLALVLALSSYQAPPLCLLDEVDAALDETNQAAAARLVALTFRDGQALCVSHHAEFHRQSGHCVAVEMRD-GVSSV 158
            +LSGG++AL  LALV +L S    P CLLDEVDA LD+ N A    LV+      Q + V+H+     +S H + V MRD GVS V
Sbjct:  634 QLSGGEKALTALALVFSLFSINPAPFCLLDEVDAPLDDDNTARFINLVSEMSEKVQFIFVTHNKISMEKSSHLLGVTMRDLGVSKV 719          
BLAST of mRNA_L-elsbetiae_contig13108.2447.1 vs. uniprot
Match: E6QIM5_9ZZZZ (Chromosome condensation and segregation SMC ATPase n=1 Tax=mine drainage metagenome TaxID=410659 RepID=E6QIM5_9ZZZZ)

HSP 1 Score: 61.2 bits (147), Expect = 6.220e-9
Identity = 36/85 (42.35%), Postives = 52/85 (61.18%), Query Frame = 0
Query:   75 LSGGQQALLGLALVLALSSYQAPPLCLLDEVDAALDETNQAAAARLVALTFRDGQALCVSHHAEFHRQSGHCVAVEMRD-GVSSV 158
            LSGG++AL  L+L++ +  YQ  P C+LDEVDAALDETN +  A L+    +D Q L V+H     + +     V M++ GVS +
Sbjct:   39 LSGGEKALTALSLLVGIFQYQPAPFCVLDEVDAALDETNVSRLADLLRGLAQDTQFLLVTHSKRMMQTADMIYGVTMQEPGVSRI 123          
BLAST of mRNA_L-elsbetiae_contig13108.2447.1 vs. uniprot
Match: A0A8E0V8B3_9PROT (Chromosome segregation protein SMC n=1 Tax=Nitrosomonas nitrosa TaxID=52442 RepID=A0A8E0V8B3_9PROT)

HSP 1 Score: 61.6 bits (148), Expect = 6.810e-9
Identity = 48/144 (33.33%), Postives = 66/144 (45.83%), Query Frame = 0
Query:   16 LRTLFGAICANKSADLVMAGPKLEDGLRLVVRNEHIQAAXXXXXXXXXXXXVVERSPQELSGGQQALLGLALVLALSSYQAPPLCLLDEVDAALDETNQAAAARLVALTFRDGQALCVSHHAEFHRQSGHCVAVEMRD-GVSSV 158
            L  LF AI     A LV++G ++ D   L+      +                  S   LSGG++AL  LALV +L      P CLLDEVDA LD+ N      LV     D Q L +SH+    + + H + V M++ GVS +
Sbjct:   17 LNELFSAIFGGGQAKLVLSGDEILDAGMLLTAQPPGKK---------------NNSIHLLSGGEKALTALALVFSLFRLNPAPFCLLDEVDAPLDDNNSMRFCDLVKRMSNDTQFLFISHNKTTIQMAEHLIGVTMQEQGVSRI 145          
BLAST of mRNA_L-elsbetiae_contig13108.2447.1 vs. uniprot
Match: UPI001FA4F272 (Structural maintenance of chromosomes protein 2 n=1 Tax=Dermatophagoides farinae TaxID=6954 RepID=UPI001FA4F272)

HSP 1 Score: 63.9 bits (154), Expect = 7.640e-9
Identity = 43/151 (28.48%), Postives = 72/151 (47.68%), Query Frame = 0
Query:    8 AYASVRGELRTLFGAICANKSADLVMAGPKLEDGLRLVVRNEHIQAAXXXXXXXXXXXXVVERSPQELSGGQQALLGLALVLALSSYQAPPLCLLDEVDAALDETNQAAAARLVALTFRDGQALCVSHHAEFHRQSGHCVAVEMRDGVSSV 158
            A+  +      +FG +  N +A L     +++DGL + V                    V + S  ELSGGQ++L+ L+LVL+L  Y   PL +LDE+DAALD+++      ++   F++ Q + VS   +    +      +  DG S+V
Sbjct:  722 AWKKINENFGAIFGTLLPNANARLAPVSSRIKDGLEIKVA----------------FGDVWKESLSELSGGQRSLVALSLVLSLLKYYPAPLYILDEIDAALDQSHTQNIGLMIRRHFKNAQFIIVSLKDDMFNNANVLFQTKFIDGFSTV 856          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13108.2447.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JDH3_9PHAE9.970e-7680.98SMC_N domain-containing protein n=1 Tax=Ectocarpus... [more]
D7FQC9_ECTSI5.890e-7284.71SMC_N domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A836CK59_9STRA3.310e-2037.10P-loop containing nucleoside triphosphate hydrolas... [more]
F0WC70_9STRA2.040e-1637.88Chromosome segregation protein Smc putative n=1 Ta... [more]
A0A024GMI1_9STRA2.570e-1646.74SMC_N domain-containing protein n=1 Tax=Albugo can... [more]
K1KGT9_9BURK4.270e-945.98Chromosome partition protein Smc n=3 Tax=Sutterell... [more]
A0A1Z9NKY0_9GAMM5.490e-946.51AAA domain-containing protein n=2 Tax=Gammaproteob... [more]
E6QIM5_9ZZZZ6.220e-942.35Chromosome condensation and segregation SMC ATPase... [more]
A0A8E0V8B3_9PROT6.810e-933.33Chromosome segregation protein SMC n=1 Tax=Nitroso... [more]
UPI001FA4F2727.640e-928.48Structural maintenance of chromosomes protein 2 n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..162
e-value: 2.7E-27
score: 97.3
NoneNo IPR availablePANTHERPTHR43941FAMILY NOT NAMEDcoord: 2..159
NoneNo IPR availablePANTHERPTHR43941:SF1STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 2coord: 2..159
IPR003395RecF/RecN/SMC, N-terminalPFAMPF02463SMC_Ncoord: 72..156
e-value: 4.7E-20
score: 72.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 64..158

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13108contigL-elsbetiae_contig13108:679..3265 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13108.2447.1mRNA_L-elsbetiae_contig13108.2447.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig13108 655..5136 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig13108.2447.1 ID=prot_L-elsbetiae_contig13108.2447.1|Name=mRNA_L-elsbetiae_contig13108.2447.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=163bp
MHEANKAAYASVRGELRTLFGAICANKSADLVMAGPKLEDGLRLVVRNEH
IQAAAAAAATAVPPAAVVERSPQELSGGQQALLGLALVLALSSYQAPPLC
LLDEVDAALDETNQAAAARLVALTFRDGQALCVSHHAEFHRQSGHCVAVE
MRDGVSSVRPQT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003395RecF/RecN/SMC_N
IPR027417P-loop_NTPase