mRNA_L-elsbetiae_contig13106.2445.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig13106.2445.1
Unique NamemRNA_L-elsbetiae_contig13106.2445.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig13106.2445.1 vs. uniprot
Match: D7G029_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G029_ECTSI)

HSP 1 Score: 170 bits (430), Expect = 1.630e-40
Identity = 99/223 (44.39%), Postives = 139/223 (62.33%), Query Frame = 3
Query:  624 VEYEIKSMDRVSSHRNIVRLMEIMVRSSSNICLVMEAAAACRGDLVEVIAAAPEGRLRC-NTARFYLKQLLDAVQHCHSEGVCHRDIQPHNLLVDPRSGNMKLSGFGRAGVWSIAAGDSTDLAYASSAALVPHAAPEVLEGSKYCGKAADCWSVGAILFTMLAGFCPFGDDD-----AKVGGYNPCVQLPPWICPLARSLLRGMMEPDPEKRYTVADVRSHPW 1274
            +E+E+ +M   ++H NI RL++++  S S I  VME A    GDL + I A  EGRL+  N    Y +QLLDA++HCHS G+CHRDI+P N+L+  + G +KL+GF  AG++  + G        ++     + APEV+EG+ Y G+ AD WS G  L+TMLAGF PF  D      A++   +   +LPP I   A SLL G++EP+P KRYT+ADVR HPW
Sbjct:   15 MEFEVTTMCCTNTHSNIFRLVDVLA-SKSKIFAVMERAGG--GDLFDAIVA--EGRLKDENLVHHYFRQLLDAIEHCHSRGICHRDIKPENVLLG-KGGVVKLTGFALAGLFDPSIGGHPANLLHATCGTPDYVAPEVIEGAGYDGRPADLWSAGVTLYTMLAGFLPFEADSIEETFARIRAAD--FKLPPEISVSAWSLLEGLLEPNPRKRYTIADVRLHPW 229          
BLAST of mRNA_L-elsbetiae_contig13106.2445.1 vs. uniprot
Match: A0A2V3IU94_9FLOR (CBL-interacting serine/threonine-protein kinase 26 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IU94_9FLOR)

HSP 1 Score: 147 bits (371), Expect = 7.780e-35
Identity = 95/258 (36.82%), Postives = 145/258 (56.20%), Query Frame = 3
Query:  525 LKLGWDQTGRRSVALKTFRTDPCDFEDHPCSQEVEYEIKSMDRVSSHRNIVRLMEIMVRSSSNICLVMEAAAACRGDLVEVIAAAPEGRLRCNTARFYLKQLLDAVQHCHSEGVCHRDIQPHNLLVDPRSGNMKLSGFGRAGVWSIAAGDSTDLAYASSAALVPHAAPEVLEGSK--YCGKAADCWSVGAILFTMLAGFCPFGDDDAKV--GGYNPC-VQLPPWICPLARSLLRGMMEPDPEKRYTVADVRSHPWFVV 1283
            +KL   Q   +  A+K    D  D + +  +  V  EI  M +  +H+NIV L E++  S S + +VM+      G+L + I    +G L    AR Y +QL+D + +CH  GVCHRD++P NLLVD  +G +K++ FG   V S+     +DL Y ++     + APE++ G++  Y G   D WS G ILF +L G  PF ++D  +     N C V+ P W+ P A+ L+  ++E DPEKRY++ DV+ HPWF+V
Sbjct:   22 VKLAQHQETGKEYAIKIL--DKSDIKANELTVNVRREIAIM-KALNHKNIVNLREVL-SSKSKLYIVMDLVRG--GELFDQIEK--KGELEVPAARKYFQQLIDGIDYCHRRGVCHRDLKPENLLVDS-NGTLKITDFG---VSSMKGVSGSDLLY-TACGTPYYCAPEIINGAEEGYSGVKIDAWSCGIILFLLLTGQLPFQNEDMALLYEQINRCKVEYPTWMSPDAKDLISRLLEKDPEKRYSLEDVKKHPWFLV 266          
BLAST of mRNA_L-elsbetiae_contig13106.2445.1 vs. uniprot
Match: A0A3L6G7R0_MAIZE (Non-specific serine/threonine protein kinase n=3 Tax=Zea mays TaxID=4577 RepID=A0A3L6G7R0_MAIZE)

HSP 1 Score: 144 bits (362), Expect = 3.690e-34
Identity = 84/212 (39.62%), Postives = 124/212 (58.49%), Query Frame = 3
Query:  651 RVSSHRNIVRLMEIMVRSSSNICLVMEAAAACRGDLVEVIAAAPEGRLRCNTARFYLKQLLDAVQHCHSEGVCHRDIQPHNLLVDPRSGNMKLSGFGRAGVWSIAAGDSTDLAYASSAALVPHAAPEVLEGSKYCGKAADCWSVGAILFTMLAGFCPFGDDDAKV---GGYNPCVQLPPWICPLARSLLRGMMEPDPEKRYTVADVRSHPWF 1277
            ++ +H N+VRL E+   S + I +V+E      G+L++ I AA EG+L    AR   +QL+D V +CH +GVCHRD++  N+LVD R GN+K+S FG + +      D        S   +   APEVL+   Y G  +D WS G IL+ ML G  PF D +  V     +    Q+P W+ P AR+LLR ++EPDP +R  +A++++HPWF
Sbjct:   66 KLLAHPNVVRLHEVAA-SKTKIYMVLELVNG--GELLDRIQAASEGKLPEQEARRLFQQLVDGVSYCHEKGVCHRDLKLENVLVD-RKGNIKISDFGLSALPQHLGNDGLLHTTCGSPNYI---APEVLQNRGYDGSLSDIWSCGVILYVMLVGHLPFDDRNIVVLYQKIFKGDTQIPEWLSPGARNLLRRILEPDPAERIAMAEIKAHPWF 270          
BLAST of mRNA_L-elsbetiae_contig13106.2445.1 vs. uniprot
Match: T0S0B6_SAPDV (Non-specific serine/threonine protein kinase n=2 Tax=Saprolegniaceae TaxID=4764 RepID=T0S0B6_SAPDV)

HSP 1 Score: 145 bits (366), Expect = 6.850e-34
Identity = 92/249 (36.95%), Postives = 140/249 (56.22%), Query Frame = 3
Query:  561 VALKTFRTDPCDFEDHPCSQEVEYEIKSMDRVSSHRNIVRLMEIMVRSSSNICLVMEAAAACRGDLVEVIAAAPEGRLRCNTARFYLKQLLDAVQHCHSEGVCHRDIQPHNLLVDPRSGNMKLSGFGRAGVWSIAAGDSTDLAYAS----SAALVPHAAPEVLEGSKYCGKAADCWSVGAILFTMLAGFCPFGDDDAKVGGYNPCVQ-----LPPWICPLARSLLRGMMEPDPEKRYTVADVRSHPWFV 1280
            VA+K    D    ++     + E  I  M R   HR++V L E++  S + I +V+E      G+L + I +  EGR    TARFY  QL++ V++CHS+GVCHRD++P NLL+D  +G++K+S FG + ++    GD TD + AS    +     + APEVL    Y G+AAD WS+G IL+ +LAGF PF  D+  +      +Q      P W  P  ++LL  ++ PDPE R T+ D++   W++
Sbjct:   34 VAIKVLDKDKIQKQNMGAQIKKEISIMKMVR---HRHVVVLKEVLA-SRTKIFIVLELITG--GELFDKIVS--EGRFNEETARFYFHQLVNGVEYCHSQGVCHRDLKPENLLLD-ENGDLKISDFGLSALYE-GGGDGTDGSRASLLHTTCGTPNYVAPEVLADKGYDGRAADVWSIGVILYVLLAGFLPF--DEPTMSALFRKIQKAEFSYPSWFSPRVKTLLNKILVPDPETRVTLQDIQQDEWYL 270          
BLAST of mRNA_L-elsbetiae_contig13106.2445.1 vs. uniprot
Match: A0A485L3Z9_9STRA (Non-specific serine/threonine protein kinase n=16 Tax=Aphanomyces TaxID=100860 RepID=A0A485L3Z9_9STRA)

HSP 1 Score: 145 bits (365), Expect = 1.160e-33
Identity = 91/249 (36.55%), Postives = 140/249 (56.22%), Query Frame = 3
Query:  561 VALKTFRTDPCDFEDHPCSQEVEYEIKSMDRVSSHRNIVRLMEIMVRSSSNICLVMEAAAACRGDLVEVIAAAPEGRLRCNTARFYLKQLLDAVQHCHSEGVCHRDIQPHNLLVDPRSGNMKLSGFGRAGVWSIAAGDSTDLAYAS----SAALVPHAAPEVLEGSKYCGKAADCWSVGAILFTMLAGFCPFGDDDAKVGGYNPCVQ-----LPPWICPLARSLLRGMMEPDPEKRYTVADVRSHPWFV 1280
            VA+K    D    ++     + E  I  M R   +R++V L E++  S + I +V+E      G+L + I +  EGR    TARFY +QL+D V++CHS+GVCHRD++P NLL+D  +G++K+S FG + ++     D  D + AS    +     + APEVL    Y G+AAD WS+G IL+ +LAGF PF  D+  +      +Q      P W  P  ++LL  ++ PDPE R T+AD++   W++
Sbjct:   34 VAIKVLDKDKIQKQNMGAQIKKEISIMKMVR---NRHVVVLKEVLA-SRTKIFIVLELITG--GELFDKIVS--EGRFNEETARFYFRQLVDGVKYCHSQGVCHRDLKPENLLLD-ENGDLKISDFGLSALYEGGGPDGADGSRASLLHTTCGTPNYVAPEVLADKGYDGRAADVWSIGVILYVLLAGFLPF--DEPTMSALFRKIQKAEFSYPSWFTPRVKTLLNKILVPDPETRSTLADIQQDEWYM 271          
BLAST of mRNA_L-elsbetiae_contig13106.2445.1 vs. uniprot
Match: A0A836CC03_9STRA (CBL-interacting-like PK n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC03_9STRA)

HSP 1 Score: 143 bits (361), Expect = 2.200e-33
Identity = 96/259 (37.07%), Postives = 141/259 (54.44%), Query Frame = 3
Query:  525 LKLGWDQTGRRSVALKTFRTDPCDFEDHPCSQEVEYEIKSMDRVSSHRNIVRLMEIMVRSSSNICLVMEAAAACRGDLVEVIAAAPEGRLRCNTARFYLKQLLDAVQHCHSEGVCHRDIQPHNLLVDPRSGNMKLSGFGRAGVWSIAAGDSTDLAYASSAALVP-HAAPEVLEGSKYCGKAADCWSVGAILFTMLAGFCPFGDDDAKVGGYNPCVQL-----PPWICPLARSLLRGMMEPDPEKRYTVADVRSHPWFVV 1283
            +KL  +      VA+K    D    +      +V+ EI  M  V  H  +V+L E++  SS+ I LV E      G+L + I    + R   + ARFY KQL++ V +CHS+GVCHRD++P N+L+D  +GN+K+S FG + ++S   GD   L    +    P + APEVL    Y G+ AD WS+G IL+ +LAGF PF  D+  +      +Q      P W     RSL+  ++ PDP +R ++A +R HPWFVV
Sbjct:   22 VKLAVNTETNEKVAIKVL--DKSIIQKQNMGAQVKREISIMKLVR-HSYVVQLKEVLA-SSTRIFLVCELITG--GELFDKIVE--KQRFSEDEARFYFKQLVEGVDYCHSQGVCHRDLKPENILLDS-NGNVKISDFGLSNLYS--GGDDEALKLLHTTCGTPNYVAPEVLADRGYDGRMADVWSLGVILYVLLAGFLPF--DEPSMSNLFRKIQAADFSYPRWFSEDVRSLIDAILVPDPRQRLSIAQIRGHPWFVV 267          
BLAST of mRNA_L-elsbetiae_contig13106.2445.1 vs. uniprot
Match: K7TIF1_MAIZE (Non-specific serine/threonine protein kinase n=6 Tax=Zea mays TaxID=4577 RepID=K7TIF1_MAIZE)

HSP 1 Score: 144 bits (362), Expect = 2.340e-33
Identity = 84/212 (39.62%), Postives = 124/212 (58.49%), Query Frame = 3
Query:  651 RVSSHRNIVRLMEIMVRSSSNICLVMEAAAACRGDLVEVIAAAPEGRLRCNTARFYLKQLLDAVQHCHSEGVCHRDIQPHNLLVDPRSGNMKLSGFGRAGVWSIAAGDSTDLAYASSAALVPHAAPEVLEGSKYCGKAADCWSVGAILFTMLAGFCPFGDDDAKV---GGYNPCVQLPPWICPLARSLLRGMMEPDPEKRYTVADVRSHPWF 1277
            ++ +H N+VRL E+   S + I +V+E      G+L++ I AA EG+L    AR   +QL+D V +CH +GVCHRD++  N+LVD R GN+K+S FG + +      D        S   +   APEVL+   Y G  +D WS G IL+ ML G  PF D +  V     +    Q+P W+ P AR+LLR ++EPDP +R  +A++++HPWF
Sbjct:   66 KLLAHPNVVRLHEVAA-SKTKIYMVLELVNG--GELLDRIQAASEGKLPEQEARRLFQQLVDGVSYCHEKGVCHRDLKLENVLVD-RKGNIKISDFGLSALPQHLGNDGLLHTTCGSPNYI---APEVLQNRGYDGSLSDIWSCGVILYVMLVGHLPFDDRNIVVLYQKIFKGDAQIPEWLSPGARNLLRRILEPDPAERIAMAEIKAHPWF 270          
BLAST of mRNA_L-elsbetiae_contig13106.2445.1 vs. uniprot
Match: A0A8K1CJ01_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CJ01_PYTOL)

HSP 1 Score: 140 bits (353), Expect = 3.750e-32
Identity = 92/255 (36.08%), Postives = 144/255 (56.47%), Query Frame = 3
Query:  543 QTGRRSVALKTFRTDPCDFEDHPCSQEVEYEIKSMDRVSSHRNIVRLMEIMVRSSSNICLVMEAAAACRGDLVEVIAAAPEGRLRCNTARFYLKQLLDAVQHCHSEGVCHRDIQPHNLLVDPRSGNMKLSGFGRAGVWSIAAGDSTDLAYAS----SAALVPHAAPEVLEGSKYCGKAADCWSVGAILFTMLAGFCPFGDDDAKVGGYNPCVQ-----LPPWICPLARSLLRGMMEPDPEKRYTVADVRSHPWFV 1280
            +TG R VA+K    D    +      +++ EI  M  V  H+++V L E++  S + I +V+E      G+L + I +  EGR   +TARFY +QL+D VQ+CH  GVCHRD++P NLL+D  +G++K+S FG + ++    G+  + + AS    +     + APEVL    Y G+AAD WS+G IL+ +LAGF PF  D+  +      +Q      P W  P  ++LL  ++ PDP  R ++AD+ +  W+V
Sbjct:   29 ETGER-VAIKVL--DKEKIQKQNMGAQIKKEISIMKMVR-HKHVVVLKEVLA-SRTKIFIVLELITG--GELFDKIVS--EGRFSEDTARFYFRQLVDGVQYCHQNGVCHRDLKPENLLLD-ENGDLKISDFGLSALYD-GGGEGGETSRASLLHTTCGTPNYVAPEVLADKGYDGRAADVWSMGVILYVLLAGFLPF--DEPTMSALFRKIQKAEFSYPSWFTPRVKNLLNRVLVPDPTTRVSLADIMNDDWYV 270          
BLAST of mRNA_L-elsbetiae_contig13106.2445.1 vs. uniprot
Match: F0W8G0_9STRA (Non-specific serine/threonine protein kinase n=3 Tax=Albugo TaxID=65356 RepID=F0W8G0_9STRA)

HSP 1 Score: 140 bits (353), Expect = 3.750e-32
Identity = 89/233 (38.20%), Postives = 134/233 (57.51%), Query Frame = 3
Query:  621 EVEYEIKSMDRVSSHRNIVRLMEIMVRSSSNICLVMEAAAACRGDLVEVIAAAPEGRLRCNTARFYLKQLLDAVQHCHSEGVCHRDIQPHNLLVDPRSGNMKLSGFGRAGVWSIAAGDSTDLAYASSAALVPHA--------APEVLEGSKYCGKAADCWSVGAILFTMLAGFCPFGDDDAKVGGYNPCVQ-----LPPWICPLARSLLRGMMEPDPEKRYTVADVRSHPWFV 1280
            +++ EI  M  V  HR++V L E++  S + I +V+E      G+L + I +  EGR    TARFY +QL+D V++CH  GVCHRD++P NLL+D  +G++K+S FG + ++    G + D    SS A + H         APEVL    Y G+AAD WS+G IL+ +LAGF PF  D+  +      +Q      P W  P   +LL  ++ PDPE+R T+AD+++  W +
Sbjct:   52 QIKKEISIMKMVR-HRHVVVLKEVLA-SRTKIFIVLELITG--GELFDKIVS--EGRFNETTARFYFQQLVDGVKYCHENGVCHRDLKPENLLLD-ENGDLKISDFGLSALYE---GGNPDGTGESSRASLLHTTCGTPNYVAPEVLADKGYDGRAADVWSIGVILYVLLAGFLPF--DEPTMSALFRKIQKAEFSYPSWFSPRVINLLNHILVPDPEQRVTLADIQTDDWLM 272          
BLAST of mRNA_L-elsbetiae_contig13106.2445.1 vs. uniprot
Match: A0A6V7PC66_ANACO (Protein kinase domain-containing protein n=1 Tax=Ananas comosus var. bracteatus TaxID=296719 RepID=A0A6V7PC66_ANACO)

HSP 1 Score: 136 bits (343), Expect = 4.820e-32
Identity = 82/229 (35.81%), Postives = 132/229 (57.64%), Query Frame = 3
Query:  606 HPCSQEVEYEIKSMDRVSSHRNIVRLMEIMVRSSSNICLVMEAAAACRGDLVEVIAAAPEGRLRCNTARFYLKQLLDAVQHCHSEGVCHRDIQPHNLLVDPRSGNMKLSGFGRAGVWSIAAGDSTDLAYASSAALVPHAAPEVLEGSKYCGKAADCWSVGAILFTMLAGFCPFGDDDA-----KVGGYNPCVQLPPWICPLARSLLRGMMEPDPEKRYTVADVRSHPWF 1277
            H    +++ EI +M ++  H N++R+ E+M  S + I +V+E      G+L + IA+   GRL+ + AR Y +QL++AV +CHS GVCHRD++P NLL+D  SG++K+S FG + +      D       ++     + APEV++   Y G  AD WS G ILF ++AG+ PF D +      K+  +      P W    A+ L+R +++P+P+ R TVA+V  + WF
Sbjct:   55 HKMIAQIKREISTM-KLIRHPNVIRMYEVMA-SKTKIYIVLELVTG--GELFDKIAS--RGRLKEDEARKYFQQLINAVDYCHSRGVCHRDLKPENLLLD-NSGHLKVSDFGLSALPQQVREDGL---LHTTCGTPNYVAPEVIKNKGYDGAKADLWSCGVILFVLMAGYLPFEDSNLTSLYKKI--FKADFSCPSWFSTSAKKLIRRILDPNPQTRITVAEVTENEWF 271          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13106.2445.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G029_ECTSI1.630e-4044.39Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A2V3IU94_9FLOR7.780e-3536.82CBL-interacting serine/threonine-protein kinase 26... [more]
A0A3L6G7R0_MAIZE3.690e-3439.62Non-specific serine/threonine protein kinase n=3 T... [more]
T0S0B6_SAPDV6.850e-3436.95Non-specific serine/threonine protein kinase n=2 T... [more]
A0A485L3Z9_9STRA1.160e-3336.55Non-specific serine/threonine protein kinase n=16 ... [more]
A0A836CC03_9STRA2.200e-3337.07CBL-interacting-like PK n=1 Tax=Tribonema minus Ta... [more]
K7TIF1_MAIZE2.340e-3339.62Non-specific serine/threonine protein kinase n=6 T... [more]
A0A8K1CJ01_PYTOL3.750e-3236.08Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
F0W8G0_9STRA3.750e-3238.20Non-specific serine/threonine protein kinase n=3 T... [more]
A0A6V7PC66_ANACO4.820e-3235.81Protein kinase domain-containing protein n=1 Tax=A... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13106contigL-elsbetiae_contig13106:1546..5003 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score173.7
Seed ortholog evalue1.7e-40
Seed eggNOG ortholog2880.D7G029
KEGG koko:K07198
KEGG Pathwayko04068,ko04140,ko04150,ko04151,ko04152,ko04211,ko04213,ko04371,ko04530,ko04710,ko04714,ko04910,ko04920,ko04921,ko04922,ko04931,ko04932,ko05410,ko05418,map04068,map04140,map04150,map04151,map04152,map04211,map04213,map04371,map04530,map04710,map04714,map04910,map04920,map04921,map04922,map04931,map04932,map05410,map05418
Hectar predicted targeting categoryother localisation
EggNOG free text desc.protein serine/threonine kinase activity
EggNOG OGsKOG0583@1,KOG0583@2759
EC2.7.11.11
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001,ko03029,ko04131
Exons5
Model size1983
Cds size1212
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815491.821853-UTR-L-elsbetiae_contig13106:1545..17901622815491.821853-UTR-L-elsbetiae_contig13106:1545..1790Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig13106 1546..1790 +
1691682924.682105-UTR-L-elsbetiae_contig13106:1545..17901691682924.682105-UTR-L-elsbetiae_contig13106:1545..1790Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig13106 1546..1790 +
1622815491.895533-UTR-L-elsbetiae_contig13106:4477..50031622815491.895533-UTR-L-elsbetiae_contig13106:4477..5003Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig13106 4478..5003 +
1691682924.749526-UTR-L-elsbetiae_contig13106:4477..50031691682924.749526-UTR-L-elsbetiae_contig13106:4477..5003Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig13106 4478..5003 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815491.8366973-CDS-L-elsbetiae_contig13106:1790..23351622815491.8366973-CDS-L-elsbetiae_contig13106:1790..2335Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13106 1791..2335 +
1691682924.6930435-CDS-L-elsbetiae_contig13106:1790..23351691682924.6930435-CDS-L-elsbetiae_contig13106:1790..2335Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13106 1791..2335 +
1622815491.8509927-CDS-L-elsbetiae_contig13106:2503..25971622815491.8509927-CDS-L-elsbetiae_contig13106:2503..2597Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13106 2504..2597 +
1691682924.705742-CDS-L-elsbetiae_contig13106:2503..25971691682924.705742-CDS-L-elsbetiae_contig13106:2503..2597Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13106 2504..2597 +
1622815491.8613937-CDS-L-elsbetiae_contig13106:3068..32151622815491.8613937-CDS-L-elsbetiae_contig13106:3068..3215Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13106 3069..3215 +
1691682924.7163703-CDS-L-elsbetiae_contig13106:3068..32151691682924.7163703-CDS-L-elsbetiae_contig13106:3068..3215Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13106 3069..3215 +
1622815491.8723614-CDS-L-elsbetiae_contig13106:3594..37051622815491.8723614-CDS-L-elsbetiae_contig13106:3594..3705Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13106 3595..3705 +
1691682924.727696-CDS-L-elsbetiae_contig13106:3594..37051691682924.727696-CDS-L-elsbetiae_contig13106:3594..3705Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13106 3595..3705 +
1622815491.8837278-CDS-L-elsbetiae_contig13106:4162..44771622815491.8837278-CDS-L-elsbetiae_contig13106:4162..4477Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13106 4163..4477 +
1691682924.737183-CDS-L-elsbetiae_contig13106:4162..44771691682924.737183-CDS-L-elsbetiae_contig13106:4162..4477Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13106 4163..4477 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13106.2445.1prot_L-elsbetiae_contig13106.2445.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig13106 1791..4477 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig13106.2445.1

>prot_L-elsbetiae_contig13106.2445.1 ID=prot_L-elsbetiae_contig13106.2445.1|Name=mRNA_L-elsbetiae_contig13106.2445.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=404bp
MYTHASTKLDRPTRIHLRSALNVQPVHPARDTLARPPPSSARLTSNIRRG
TYSWTMEQNQGDKTDARLSTVAKQLEQHRQLQKKPSSSSVDIELKLGWDQ
TGRRSVALKTFRTDPCDFEDHPCSQEVEYEIKSMDRVSSHRNIVRLMEIM
VRSSSNICLVMEAAAACRGDLVEVIAAAPEGRLRCNTARFYLKQLLDAVQ
HCHSEGVCHRDIQPHNLLVDPRSGNMKLSGFGRAGVWSIAAGDSTDLAYA
SSAALVPHAAPEVLEGSKYCGKAADCWSVGAILFTMLAGFCPFGDDDAKV
GGYNPCVQLPPWICPLARSLLRGMMEPDPEKRYTVADVRSHPWFVVKRGG
GGSSSSSSSPSHSSSSSCGGRSSRSNSSSSRSSSGGGRSSRSNSSSSCSS
SCS*
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mRNA from alignment at L-elsbetiae_contig13106:1546..5003+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig13106.2445.1 ID=mRNA_L-elsbetiae_contig13106.2445.1|Name=mRNA_L-elsbetiae_contig13106.2445.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3458bp|location=Sequence derived from alignment at L-elsbetiae_contig13106:1546..5003+ (Laminarionema elsbetiae ELsaHSoW15)
TTTGATGCATTCGGCGTTCTTGAACCTACATTGGCTCTGATGAATGATTA TTTTTGCCAAAAAAGTGTACGTACGTACCTCTGTAGATTCGGGAAACGTA CTTGACGTACGACGTACTTGTACGTACTTGTACGCACTTCAGAGGTAAAG CGCCACTTTACCAACTACTTCAATTGAACTACATTAGAGATACACCAAGT TGGATACACGCACTTCCGCTTTTCACCAATGTCCATACCTCGGCTATGTA CACGCACGCCAGCACTAAATTAGATAGGCCAACACGCATTCACCTGCGCT CTGCACTGAACGTGCAGCCTGTTCATCCTGCTCGCGACACTCTCGCTCGG CCCCCACCTTCTTCGGCAAGACTCACCTCCAACATTCGACGTGGTACATA CAGTTGGACCATGGAGCAGAATCAGGGCGACAAGACGGACGCACGGCTCT CCACCGTCGCAAAGCAGCTAGAGCAGCACCGCCAGCTTCAGAAGAAGCCT TCCTCTTCGTCAGTAGACATCGAGCTGAAGCTGGGTTGGGACCAGACCGG CAGGCGGAGCGTGGCCCTGAAGACCTTCCGGACGGACCCTTGTGATTTCG AGGACCACCCGTGCAGTCAGGAAGTTGAGTACGAGATCAAGTCCATGGAC CGGGTATCATCTCACCGCAACATCGTGCGGCTCATGGAAATTATGGTGAG ATCCTCTTCGAACATCTGCCTCGTCATGGAGGCAGCCGCCGCATGTCGAG GAGATCTGGTGGAGGTGATTGCTGCTGCGCCGGAGGGCAGGTGAGGGAGT GATTAGTAACGCCGAACAAGAAGGAATTTGATACACCGTTCTTATACATA TACCCAGTGCAAAACTTGCAAAACTTACAAAACCTGTCTACCCACGACCT GTCGACGCAACCCACCCCTTCCCCTGCTGTACCGAAATCAACACACGCCT GATTGCAGGCTGAGGTGCAACACAGCCCGCTTCTACTTGAAACAACTGCT AGATGCCGTGCAGCACTGCCATTCGGAAGGCGTGTGTCACCGTGACATAC AGGTAAGCATCTTCAAGCGTCCCCCTGCATCCATCTCTCTGCACTACTGT TGCCCCTTGTCTCGTTGTCGGCTCTTCTTGTCGAAATGCCTCGGAAGCTG GGTTTGATATTTTGACCTTAAATTAAAGTCCCTCTATTATCTCGTATCCA TCCACCTCCTTGCTGATGAATCGAGAAAGCTTTCCCCACCCAATCCCACT CACCCTCTGTGCTGTCTCAAAAACAAATTATAGTGTGTGCGCGCGCTACC TCCCCCGTGGACCTTCACCCCTTCACCCACTTCATCCAACCAACTTCCTC TTTTCAGCCTCGTGCCTTGGTTGCCCCCATTGGCCCCGAGCACGCTCACC AACCCTCCTACTCACCCTTCCTTCCTACCCCCCCCCCCCCCCCCCCCTAT GCCTGCCCCCCCCGCCCCCTAACCTCCTTGTGGACCCCCGACCCGGAAAC ACACCGTATGCATGCACACGCAGCCGCATAACCTCCTTGTGGACCCACGA TCCGGAAACATGAAGCTTTCGGGATTCGGCAGAGCAGGCGTGTGGAGCAT AGCGGCGGGAGATTCGACAGACCTTGCGTACGCCTCGAGCGCAGCCCTTG TGCCTCACGCTGCACCGGAGGTAAGCGTTATCTAGCAAAATATGTGGCAG TTTATCTCTGGGTGGTGAGCGGTACGGGGCCAAATAGATCGAGTACTGAG TACTTGCTCCGTGGTGGCCGAGTATGTGAAACAGGGGGATATTGAATATT CACAATACTCGCCGCTCCTTAAACGGAAAAATCGAAAAATCGACACCCCA AAGTAGTCCATGCAAGTGAGAACGGTCACGATTGACCGCTCACGAGTACG GAGCAACAGGGCCCAACTTTGCAAAACCTCATCCAGCTGCAGGAGTTCTC AGCCCATCCCCTCTCCCACCCCCGGTACGCTCATCGTTCTCAATCGCCGC TGCCCTGCATGAATCCATGCCCATGACCCGGGTGCTTGGCGCTGCTAAGG TGCTGGAAGGGTCCAAGTATTGCGGAAAGGCCGCTGATTGCTGGTCAGTG GGTGCCATCCTGTTCACGATGCTGGCCGGGTTCTGCCCTTTCGGAGACGA CGACGCCAAGGTAAGAGAGGGGGGAGGTGGGGAAAGGGGGGGAAACGAAT CGGAAGAGATTAAGCCACCGCTTGCGACGAGCCATGCTCATCGGGTGGCA AGCACCACCACTCTACTCTCATCGGAGAATAAAAAGCGAAATAGCAAGGT GATCTCCCTGCCCCCCACCTGTGCTTGACCCGCCAACTGTCGTCGCGACA TTTTCCTTGGCACAAAAAACTTTTGAAGTAGATGACAACATTACGGCATC ACGGTGGGCTCTACCCGCCGGAAAATTGTTGGCCGACCTCGCAAATCTAA ATCTTTGCAGGGGAGATGTTGAACTCTTCTGATATTTAAGTTGTTTTTCT GCTCGCTTCGCCACATATTACGTCTCTGTATGGAATACCGTTTGAACCCC ATATCGAGTCTTTGCTCTAGTATAGGTTAGGTTCCATCTTTGATTCTTTG TGATATTTTAAAAAAAGGTGGGAGGCTACAATCCCTGCGTCCAGCTCCCC CCCTGGATATGTCCGTTGGCTCGCTCCCTCCTACGAGGAATGATGGAGCC GGACCCGGAGAAACGCTACACGGTGGCAGACGTTCGCTCGCACCCGTGGT TCGTTGTCAAGCGTGGCGGCGGCGGGAGCAGCAGCAGCAGTTCAAGCCCA AGTCACAGCAGCAGCAGCAGCTGCGGCGGCAGAAGCAGCAGAAGCAACAG CAGCAGCAGCCGCAGCAGCAGCGGCGGCGGCAGAAGCAGCAGAAGCAACA GCAGCAGCAGCTGCAGCAGCAGCTGCAGCTAGAGCAGTGGTGACGCTGAG GGTACCAGTGACGGTAATAGGAGCGGCAGGGACGGCATCTACAAGTCAAG GCACACCGAAAGCCTTGGTTGTTAGTGCGCGGCTGAGTCTGACACAAGCG CGAGTGACGGAGGTTATGATTTTTGATTGTTGCACAATATGTTTGGTTCG CTTGAAAGGTGTGCATTATGTTCGGAGGGCAGAAAGTTGCCCTGTCGTCT TTGCGGCCGGCACCTATTTCCGATTCGTCGCTTCGGGTGCGTAGAATAAG CTTTTCCTGCCTCCTCGTCGGGGGGGCAGTTTCGGAAGTTTCAAATTACT TCGAAGTATGTGCAAAGCTGCAGTTTGTGGAGTCAAGAGGGCTCTCTCGT CTGTTGTATTTAGATGCTTACCTGTCGTCTTGTGTCTATTTCGTTTTTGT TGTGCATCGCAGCGGGTGAGTACTGCTGTAGAGAACTAGAAGTTACAGGC GCGGGGGGTCAAAACCCTTTTTTTATTATTCAACGTAAAATATCTGAGGA ATGCGGGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig13106:1546..5003+

>mRNA_L-elsbetiae_contig13106.2445.1 ID=mRNA_L-elsbetiae_contig13106.2445.1|Name=mRNA_L-elsbetiae_contig13106.2445.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2424bp|location=Sequence derived from alignment at L-elsbetiae_contig13106:1546..5003+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTACACGCACGCCAGCACTAAATTAGATAGGCCAACACGCATTCACCT
GCGCTCTGCACTGAACGTGCAGCCTGTTCATCCTGCTCGCGACACTCTCG
CTCGGCCCCCACCTTCTTCGGCAAGACTCACCTCCAACATTCGACGTGGT
ACATACAGTTGGACCATGGAGCAGAATCAGGGCGACAAGACGGACGCACG
GCTCTCCACCGTCGCAAAGCAGCTAGAGCAGCACCGCCAGCTTCAGAAGA
AGCCTTCCTCTTCGTCAGTAGACATCGAGCTGAAGCTGGGTTGGGACCAG
ACCGGCAGGCGGAGCGTGGCCCTGAAGACCTTCCGGACGGACCCTTGTGA
TTTCGAGGACCACCCGTGCAGTCAGGAAGTTGAGTACGAGATCAAGTCCA
TGGACCGGGTATCATCTCACCGCAACATCGTGCGGCTCATGGAAATTATG
GTGAGATCCTCTTCGAACATCTGCCTCGTCATGGAGGCAGCCGCCGCATG
TCGAGGAGATCTGGTGGAGGTGATTGCTGCTGCGCCGGAGGGCAGATGTA
CACGCACGCCAGCACTAAATTAGATAGGCCAACACGCATTCACCTGCGCT
CTGCACTGAACGTGCAGCCTGTTCATCCTGCTCGCGACACTCTCGCTCGG
CCCCCACCTTCTTCGGCAAGACTCACCTCCAACATTCGACGTGGTACATA
CAGTTGGACCATGGAGCAGAATCAGGGCGACAAGACGGACGCACGGCTCT
CCACCGTCGCAAAGCAGCTAGAGCAGCACCGCCAGCTTCAGAAGAAGCCT
TCCTCTTCGTCAGTAGACATCGAGCTGAAGCTGGGTTGGGACCAGACCGG
CAGGCGGAGCGTGGCCCTGAAGACCTTCCGGACGGACCCTTGTGATTTCG
AGGACCACCCGTGCAGTCAGGAAGTTGAGTACGAGATCAAGTCCATGGAC
CGGGTATCATCTCACCGCAACATCGTGCGGCTCATGGAAATTATGGTGAG
ATCCTCTTCGAACATCTGCCTCGTCATGGAGGCAGCCGCCGCATGTCGAG
GAGATCTGGTGGAGGTGATTGCTGCTGCGCCGGAGGGCAGGCTGAGGTGC
AACACAGCCCGCTTCTACTTGAAACAACTGCTAGATGCCGTGCAGCACTG
CCATTCGGAAGGCGTGTGTCACCGTGACATACAGGCTGAGGTGCAACACA
GCCCGCTTCTACTTGAAACAACTGCTAGATGCCGTGCAGCACTGCCATTC
GGAAGGCGTGTGTCACCGTGACATACAGCCGCATAACCTCCTTGTGGACC
CACGATCCGGAAACATGAAGCTTTCGGGATTCGGCAGAGCAGGCGTGTGG
AGCATAGCGGCGGGAGATTCGACAGACCTTGCGTACGCCTCGAGCGCAGC
CCTTGTGCCTCACGCTGCACCGGAGCCGCATAACCTCCTTGTGGACCCAC
GATCCGGAAACATGAAGCTTTCGGGATTCGGCAGAGCAGGCGTGTGGAGC
ATAGCGGCGGGAGATTCGACAGACCTTGCGTACGCCTCGAGCGCAGCCCT
TGTGCCTCACGCTGCACCGGAGGTGCTGGAAGGGTCCAAGTATTGCGGAA
AGGCCGCTGATTGCTGGTCAGTGGGTGCCATCCTGTTCACGATGCTGGCC
GGGTTCTGCCCTTTCGGAGACGACGACGCCAAGGTGCTGGAAGGGTCCAA
GTATTGCGGAAAGGCCGCTGATTGCTGGTCAGTGGGTGCCATCCTGTTCA
CGATGCTGGCCGGGTTCTGCCCTTTCGGAGACGACGACGCCAAGGTGGGA
GGCTACAATCCCTGCGTCCAGCTCCCCCCCTGGATATGTCCGTTGGCTCG
CTCCCTCCTACGAGGAATGATGGAGCCGGACCCGGAGAAACGCTACACGG
TGGCAGACGTTCGCTCGCACCCGTGGTTCGTTGTCAAGCGTGGCGGCGGC
GGGAGCAGCAGCAGCAGTTCAAGCCCAAGTCACAGCAGCAGCAGCAGCTG
CGGCGGCAGAAGCAGCAGAAGCAACAGCAGCAGCAGCCGCAGCAGCAGCG
GCGGCGGCAGAAGCAGCAGAAGCAACAGCAGCAGCAGCTGCAGCAGCAGC
TGCAGCTAGGTGGGAGGCTACAATCCCTGCGTCCAGCTCCCCCCCTGGAT
ATGTCCGTTGGCTCGCTCCCTCCTACGAGGAATGATGGAGCCGGACCCGG
AGAAACGCTACACGGTGGCAGACGTTCGCTCGCACCCGTGGTTCGTTGTC
AAGCGTGGCGGCGGCGGGAGCAGCAGCAGCAGTTCAAGCCCAAGTCACAG
CAGCAGCAGCAGCTGCGGCGGCAGAAGCAGCAGAAGCAACAGCAGCAGCA
GCCGCAGCAGCAGCGGCGGCGGCAGAAGCAGCAGAAGCAACAGCAGCAGC
AGCTGCAGCAGCAGCTGCAGCTAG
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