prot_L-elsbetiae_contig1310.2442.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1310.2442.1
Unique Nameprot_L-elsbetiae_contig1310.2442.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length760
Homology
BLAST of mRNA_L-elsbetiae_contig1310.2442.1 vs. uniprot
Match: A0A6H5KKZ1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKZ1_9PHAE)

HSP 1 Score: 248 bits (633), Expect = 1.620e-65
Identity = 165/472 (34.96%), Postives = 242/472 (51.27%), Query Frame = 0
Query:  146 NQDEGRLESERRLLELLDLIVGTLHYLMIP----MGESQMQKLFDFHTKFALRFLKASPPHMREWGWNQMDGLLSLTQRHCWSPRAVRVQGAGSPELDGVYRVSRNDATGLREKAYFVSAKTLASSMPPQNRTPPRYIHEGGT--NELSLSQNCEGRSL---WYISRLVPSTPCHRATTKACYSFQAPSPAENLVRPCGSGWEKADEHE----DLDPPPVVTAETSEGYLCPEGKGKNTREWELAEWIIRNKVVDKIFEEPTSPAVVKGSIELLRFMARMEATLTPDHISLIWRSAV-KMGPEFQIVANNMLVRLAPDVKPELMVHLFERLQEGVGGSREWGEWRDVLMFLAFLANNPGHRTLGIFGKVRAATASLVWSLLEKPEVLRHEFCKPVSTLLTSVVY-TPKETMN---------NQNNFQQFLERCIGSWQTSSES---------------PGSVSTVRYMLDNF 578
            +++E + ES+  L  L+  I   + +   P     GE +M++   FH++  LR L+AS   MR WGW Q + L++ + RH W  +A  V+GAG+   +GVYRVS           Y  +A T A   P +    P+Y ++G    + L     C+ R+    W+IS   P++P    T K    +Q  S  +N   P  +GWE A + +     ++PPP VT   SEGYLCP G+  NT EWELA WI+ NKVV++IF +     VV  S +LL+F++ ME  LT +H+ LIW S V K  PE Q V   +L  L   +KPEL+VHL  RLQE   G+ + G   +VL F+  LA N GH  L     V+AAT  L+WSLL +P V RH+ C+ V++    ++  +P  T              +  +FL +CI   +  +E                  S+  VR++L+NF
Sbjct:  233 SEEELKKESQEALGHLVRNIRHVMMFQTSPGVPYAGEQEMRENVRFHSELVLRHLRASSLPMRLWGWEQTEDLINHSHRHRWHAKAYLVEGAGTKCCNGVYRVSPE---------YTANAPTKAGPTPAEEDA-PKYTYQGKEPGDPLMTLFRCKMRTKAHWWFISEADPTSP---GTDKDVDYYQHKSNNQNNFMPWRTGWEAASDTKLLVKGMNPPPTVTPVPSEGYLCPPGEELNTLEWELARWIVENKVVEEIFGDSIHREVVGRSAKLLQFLSSMEDALTTEHLDLIWSSCVGKAEPELQAVVYQLLTTLVECMKPELVVHLIGRLQESADGAGKTGGRSEVLAFVECLAANQGHIILTRNKAVKAATTELLWSLLREPSVTRHKSCEAVTSFFAQMLQISPTLTAGVGPEGGGPARYLHHHKFLGQCIDFLREKAECVPPSGVLSEAEEAAVSRSLELVRFLLENF 691          
BLAST of mRNA_L-elsbetiae_contig1310.2442.1 vs. uniprot
Match: D7G2G5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2G5_ECTSI)

HSP 1 Score: 63.2 bits (152), Expect = 1.270e-6
Identity = 48/142 (33.80%), Postives = 64/142 (45.07%), Query Frame = 0
Query:  252 LREKAYFVSAKTL----ASSMPPQNRTPPRYIHEGGTNELSLSQNCEGRSLWYISRLVPSTPCHRATTKACYSFQAPSPAENLVRPCGSGWEKADEHEDL----DPPPVVTAETSEGYLCPEGKGKNTREWELAEWIIRNKV 385
            +RE   F S   L    ASS+P         +   G  +     N   R  W  +++  + P    T K    +Q  S   N   P  +GWE A + + L    +PPP VT   SEGYLCP  +  NT EWELA WI+ NK+
Sbjct:  310 MRENVRFHSELVLRHLRASSLP---------MRLWGWEQTEDLINHSHRHRWN-AKVYLADPTSPGTDKDVDYYQHKSNNHNNFMPWRTGWEAASDTKLLVKGVNPPPTVTPVPSEGYLCPPREEYNTLEWELARWIVENKL 441          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1310.2442.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KKZ1_9PHAE1.620e-6534.96Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7G2G5_ECTSI1.270e-633.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 33..85
e-value: 8.4E-4
score: 28.6
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 6..92
e-value: 6.4E-6
score: 28.2
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 15..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1310contigL-elsbetiae_contig1310:10339..18437 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1310.2442.1mRNA_L-elsbetiae_contig1310.2442.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1310 10323..18993 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1310.2442.1 ID=prot_L-elsbetiae_contig1310.2442.1|Name=mRNA_L-elsbetiae_contig1310.2442.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=760bp
MASKRGGPSGKGKGKRRRFSGEMDDERDDGHPYCSICSASAPGEIIRCAF
CKASCHGWCVSLRDRDFLPEGGHAWFEKYACPGCVEKGERSTRSSGSKRL
SSSDTGEYSDLHASAKALWDLVLTTSISSTETAEWTCRMVINTVENQDEG
RLESERRLLELLDLIVGTLHYLMIPMGESQMQKLFDFHTKFALRFLKASP
PHMREWGWNQMDGLLSLTQRHCWSPRAVRVQGAGSPELDGVYRVSRNDAT
GLREKAYFVSAKTLASSMPPQNRTPPRYIHEGGTNELSLSQNCEGRSLWY
ISRLVPSTPCHRATTKACYSFQAPSPAENLVRPCGSGWEKADEHEDLDPP
PVVTAETSEGYLCPEGKGKNTREWELAEWIIRNKVVDKIFEEPTSPAVVK
GSIELLRFMARMEATLTPDHISLIWRSAVKMGPEFQIVANNMLVRLAPDV
KPELMVHLFERLQEGVGGSREWGEWRDVLMFLAFLANNPGHRTLGIFGKV
RAATASLVWSLLEKPEVLRHEFCKPVSTLLTSVVYTPKETMNNQNNFQQF
LERCIGSWQTSSESPGSVSTVRYMLDNFELKHIRQLAHLFDTGHYVLTAN
SEWSNDGAGEGQAKPKENQSGQTSLLGCIKAEETAAARFPETLRQEKCDI
CQLPDLLDNAGTDMFGVVSWRCRCPTRRKAHSRCIFAHNEKHRRTQCPHC
RKDMSFGKNMETGRQWSSLELHNPPNDAVLTDGDYESDDYDSPSDVVDDH
RNDPTFRGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR013083Znf_RING/FYVE/PHD
IPR011011Znf_FYVE_PHD