prot_L-elsbetiae_contig13085.2434.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig13085.2434.1
Unique Nameprot_L-elsbetiae_contig13085.2434.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length193
Homology
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BLAST of mRNA_L-elsbetiae_contig13085.2434.1 vs. uniprot
Match: A0A6H5JU58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU58_9PHAE)

HSP 1 Score: 143 bits (361), Expect = 4.050e-36
Identity = 78/123 (63.41%), Postives = 90/123 (73.17%), Query Frame = 0 
Query:   71 GVFAEVVASRRATGQRTHELTDGTAATLDSPATRVWAQVLGEVQRRTEGNENGIVLRCEGVRRREAERFRHASAQTTAFLRDLAASVGCSDNHWSVLPCAPAXXXXXAVRRPTTAGGAGGARR 193
            G  A+VV SRRA GQRT+EL +   ATL+SP TR+W QVLGEVQRRTEG  + +VLRCE VRRREAERFRH S QT  FL DLAA+VGCSDN W+V PC  A     AV+R T +   GGA+R
Sbjct:  348 GDQADVVTSRRAAGQRTNELLESAVATLNSPGTRMWVQVLGEVQRRTEGKVSDVVLRCESVRRREAERFRHVSGQTNTFLHDLAAAVGCSDNQWAVPPCKAA-----AVQRTTGSSAGGGAQR 465
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BLAST of mRNA_L-elsbetiae_contig13085.2434.1 vs. uniprot
Match: D8LLH8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLH8_ECTSI)

HSP 1 Score: 142 bits (357), Expect = 1.380e-35
Identity = 78/123 (63.41%), Postives = 89/123 (72.36%), Query Frame = 0 
Query:   71 GVFAEVVASRRATGQRTHELTDGTAATLDSPATRVWAQVLGEVQRRTEGNENGIVLRCEGVRRREAERFRHASAQTTAFLRDLAASVGCSDNHWSVLPCAPAXXXXXAVRRPTTAGGAGGARR 193
            G  A+VV SRRA GQRT+EL +   ATL+SP TR+W QVLGEVQRRTEG  + +VLRCE VRRREAERFRH S QT  FL+DLAA+VGCSDN W+V PC        AV+R T A   GGA R
Sbjct:  264 GDQADVVNSRRAAGQRTNELLESAVATLNSPGTRMWVQVLGEVQRRTEGKVSDVVLRCESVRRREAERFRHVSGQTNTFLQDLAAAVGCSDNQWAVPPC-----KARAVQRTTGASAGGGAPR 381
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13085.2434.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JU58_9PHAE4.050e-3663.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLH8_ECTSI1.380e-3563.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13085contigL-elsbetiae_contig13085:2115..4387 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13085.2434.1mRNA_L-elsbetiae_contig13085.2434.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig13085 2115..4387 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig13085.2434.1 ID=prot_L-elsbetiae_contig13085.2434.1|Name=mRNA_L-elsbetiae_contig13085.2434.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=193bp
GSGYGGGVDRVSSRLRRGAGVAGGGRAWRQRSAVAMPVHQMLEVLRAESW
PAFDRLEREDLERRILDEAAGVFAEVVASRRATGQRTHELTDGTAATLDS
PATRVWAQVLGEVQRRTEGNENGIVLRCEGVRRREAERFRHASAQTTAFL
RDLAASVGCSDNHWSVLPCAPAPAPAPAVRRPTTAGGAGGARR
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