prot_L-elsbetiae_contig1308.2431.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1308.2431.1
Unique Nameprot_L-elsbetiae_contig1308.2431.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length1008
Homology
BLAST of mRNA_L-elsbetiae_contig1308.2431.1 vs. uniprot
Match: D7FPN7_ECTSI (ATP-dependent DNA helicase RecG n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPN7_ECTSI)

HSP 1 Score: 1080 bits (2792), Expect = 0.000e+0
Identity = 632/1022 (61.84%), Postives = 726/1022 (71.04%), Query Frame = 0
Query:    1 MDGGGSCSSLRMFRLLQGDVGSGKTAVAFLAMLRAAGEGSQSCMLAPTEVLTVQHLRTLRSMAEGIERPDGEGNLRVELLTGHIKGKARQLLLDDVKAGKVDILVATHAVLTSASTAFRDLGLAVVDEEQRFGVEQRDKLTGFAQHVLYLSATPIPRSLTLALYGDMEISQIREMPQGAAEIVTTLIPVAKVKDIVARLKDQEDTDGKSDSGSRQYLASAVERYEALVEELGEDRVSLLHGKMTSAEKNKRLSEFSAVEKGKGLRVLVSTSIIEVGVDVPRAAVCVVENAEMFGLSQLHQLRGRLGRTNRGKKGETATA--ASPPPLATPEEMP-QEKRQTSHCILLYGPDITGDATERLKAIRATRDGFLLAERDLALRGPGEVLGVRQKGYVEGKFKVADLARQGSLADHANRRARQLVESWVVRGDGXXXXDDVVTTPAEGREGSGVDGDVHQGAAAVAARDXXXXXXXXXXXXXXXXXXERGHPQSLGLLFALCGFDADAEALLCGFEAPASWPPLLFSPSLPPXXX-----GVASGAVATAAATGVERREETADIWSEPGGEQEGEVGRG-SVAASEGNELPS--------SVPPAAYSLLDYEEAAVEGEAAAGARVEAGDLPEITGQQRQERGRREQRPDAAMPAA-YFDDEADFLEKSASEYAELMVDQEEDKEYLSGLYFAPPPTDEASKLATDGPRPPSQPFAASAGVVWPRGTAPGGSGGTDDTRPPREGEGVGAEPGIIRRANLLEGGQTIVLIDVETTGLGPRNDRVIQLAGKVLGSEDPRHLYSAYVDPDGAYLSPRIRELTGISPEVLSDNNARVFREVWQDFASWLSEISVEEEAEGRSNGGVVLVAHNAKFDHKFLAAEQSRGGFDNFMMGQEMGVVAVVDSLAVLREKSIWRQNPADLARPSTPPNFKLAVLFEHLYGYKMPGAHNAMGDVHGLESVLSAPGISERWRAVASDHPTCQIPVPRSLADLQAATQAASAPRARNKPSTRGGSVPFRRSYHTYRRRG 1004
            M+G GSCSSLRMFRLLQGDVGSGKTAVAFLAMLRAAG+GSQSCMLAPTEVLTVQHL+TLRSMAEGIERPDG+GNLRVELLTG IKGKARQ LL+DVK+G+VDILVATHAVLTSASTAFRDLGLAVVDEEQRFGVEQRDKLTGFAQHVLYLSATPIPRSLTLAL+GDMEISQIREMP+G A I TTLIPVAK K+++ RLK +EDTD KS+S +RQ+LASA ERY+ALV+ELGEDRV+LLHGKMTSAEKNKRLSEFS  EKGKGLRVLVSTSIIEVGVDVPRA VCVVENAEMFGLSQLHQLRGRLGRT+RGK+  + TA   S    A+PEE P Q+KRQTSHCILLYGPD+  DATERLKA+R TRDGFLLAERDLALRGPGEVLG+RQKGY+EGKFKVADLARQGSLA+HA++RAR+LVESW  RG       D     A G    G    + +G A     +                  ERG P+SLGLL  LCG  ADA+ALL GF           S + PP        GVA+G            RE       E   ++  E+ +   VAA+  +++ S          PPA+ S      A  E EA A   V    +    G   +E G     P+ A+PAA YFDDEADFLEKSASEYAE+M  Q+E+ EYLSG  FAP                       S+G V P G   G  GG         GEGV     IIRRA+L EG  T+V++DVETTGL  + DRVIQLA KVLGSE+PRH ++ +VDP    + PR+RE+TGI+PE+L+ N AR F +VW +FA+WLS +  EE+AEGR  GGVV VAHNA+FDHKFL  E SR GF  FMMGQ+MGVV +VDSL  L+E S+WRQ  +D   P+ P NFKL  +FEHLYGY+MP AHNAMGDV GLE +LSAPGI+E WR VAS HP+CQIPVPRSLA+LQAAT  A+  R R  P+ R  +  +R  Y+  RR G
Sbjct:   33 MEGSGSCSSLRMFRLLQGDVGSGKTAVAFLAMLRAAGQGSQSCMLAPTEVLTVQHLQTLRSMAEGIERPDGKGNLRVELLTGSIKGKARQQLLNDVKSGEVDILVATHAVLTSASTAFRDLGLAVVDEEQRFGVEQRDKLTGFAQHVLYLSATPIPRSLTLALFGDMEISQIREMPRGTANIETTLIPVAKAKEVMDRLKGREDTDDKSESSTRQHLASATERYDALVKELGEDRVTLLHGKMTSAEKNKRLSEFSGGEKGKGLRVLVSTSIIEVGVDVPRAGVCVVENAEMFGLSQLHQLRGRLGRTDRGKRERSTTAPTGSLQQPASPEEDPSQDKRQTSHCILLYGPDVGNDATERLKAVRKTRDGFLLAERDLALRGPGEVLGMRQKGYIEGKFKVADLARQGSLAEHASKRARRLVESWTPRGAAAAAAADAEEAAASGAPRVGGTVALKEGGAGADYDE------------------ERGRPESLGLLLVLCGLGADAKALLSGFA----------SRTPPPGGADGDAAGVAAGXXXXXXXXXXREREA-----KEHAPQRATELPQSFPVAAATPDDVESLNTSTPAADAPPASSSSAPDFAARAEAEATAAVGVSGSRMTAGPGSSGKEPG-----PELAVPAAVYFDDEADFLEKSASEYAEMMEGQDEEDEYLSGFSFAPXXXXXXXXXXXXXXXXXXX-XXXSSGEVAPTGPPVGADGGAS------RGEGVA----IIRRADLSEGTHTVVVVDVETTGLRAKEDRVIQLAAKVLGSENPRHSFAEFVDPGAVGVPPRVREITGITPEILAANGARPFPQVWPEFAAWLSGVVAEEQAEGRGEGGVVFVAHNAQFDHKFLKEEVSRCGFSRFMMGQDMGVVCIVDSLRCLKESSLWRQKASDFHMPTRPKNFKLGGVFEHLYGYEMPDAHNAMGDVVGLERILSAPGINEGWRGVASSHPSCQIPVPRSLAELQAATNIAA--RTRKPPARRTKADGWR--YYNNRRTG 1001          
BLAST of mRNA_L-elsbetiae_contig1308.2431.1 vs. uniprot
Match: A0A6H5JXY9_9PHAE (ATP-dependent DNA helicase RecG n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXY9_9PHAE)

HSP 1 Score: 1074 bits (2777), Expect = 0.000e+0
Identity = 640/1032 (62.02%), Postives = 732/1032 (70.93%), Query Frame = 0
Query:    1 MDGGGSCSSLRMFRLLQGDVGSGKTAVAFLAMLRAAGEGSQSCMLAPTEVLTVQHLRTLRSMAEGIERPDGEGNLRVELLTGHIKGKARQLLLDDVKAGKVDILVATHAVLTSASTAFRDLGLAVVDEEQRFGVEQRDKLTGFAQHVLYLSATPIPRSLTLALYGDMEISQIREMPQGAAEIVTTLIPVAKVKDIVARLKDQEDTD--------------GKSDSGSRQYLASAVERYEALVEELGEDRVSLLHGKMTSAEKNKRLSEFSAVEKGKGLRVLVSTSIIEVGVDVPRAAVCVVENAEMFGLSQLHQLRGRLGRTNRGKKGETATA--ASPPPLATPEEMP-QEKRQTSHCILLYGPDITGDATERLKAIRATRDGFLLAERDLALRGPGEVLGVRQKGYVEGKFKVADLARQGSLADHANRRARQLVESWVVRGDGXXXXDDVVTTPAEGREGSGVDGDVHQGAAAVAARDXXXXXXXXXXXXXXXXXXERGHPQSLGLLFALCGFDADAEALLCGFEAPASWPPLLFSPSLPPXXXGVASGAVATAAAT-GVERREETADIWSEPGGEQEGEVGRGSVAASEGNE-----LPSSVPP--AAYSLLDYEEAAVEGEAAAGARVEAGDLPEITGQQRQERGRREQRPDAAMPAA-YFDDEADFLEKSASEYAELMVDQEEDKEYLSGLYFAPP--PTDEASKLATDGPRPPSQPFAASAGVVWPRGTAPGGSGGTDDTRPPREGEGVGAEPGIIRRANLLEGGQTIVLIDVETTGLGPRNDRVIQLAGKVLGSEDPRHLYSAYVDPDGAYLSPRIRELTGISPEVLSDNNARVFREVWQDFASWLSEISVEEEAEGRSNGGVVLVAHNAKFDHKFLAAEQSRGGFDNFMMGQEMGVVAVVDSLAVLREKSIWRQNPADLARPSTPPNFKLAVLFEHLYGYKMPGAHNAMGDVHGLESVLSAPGISERWRAVASDHPTCQIPVPRSLADLQAATQAASAPRARNKPSTRGGSVPFRRSYHTYRRRG 1004
            MDG GSC SLRMFRLLQGDVGSGKTAVAFLAMLRAAG+GSQSCMLAPTEVLT QHL+TLRSMAEGIERPDG+GNLRVELLTG +KGK+RQ LL+DVKAG+VDILVATHAVLTSASTAFRDLGLAVVDEEQRFGVEQRDKLTGFAQHVLYLSATPIPRSLTLALYGDMEISQIREMP+GAA I TTL+PVAK K+++ RLK +EDTD               KS+S +RQ+LASA ERY+ALV+ELGEDRV+LLHGKMTSAEKN+RLSEFS  EKGKGLRVLVSTSIIEVGVDVPRA VCVVENAEMFGLSQLHQLRGRLGRT+RGK+  + TA   S    ATPEE P Q+KRQTSHCILLYGPD+  DATERLKA+R TRDGFLLAERDLALRGPGEVLG+RQKGY+EGKFKVADLARQGSLA+HA++RAR+LVESW  RG             A   E +   G   +G   VA ++                  E G P+SLGLL  LCG  ADAEALL GF   AS  PL      P    G A+G VA   A  G E  E  A   +     +  +    + A  +G E      P++ PP  A+ S  D+    V  EA AG     G L   T      R + E  P+ A+PAA YFDDEADFLEKSASEYAE+M DQ+E+ EYLSG  FAPP  P                      +G V P GT  GG  G         GEGV     IIRRA+L EG  T+V++DVETTGL  + DRVIQLA KVLGSE+PRH ++ Y+DP    + PR+RE+TGI+PE+L+ N AR F +VW +FA+WLS +  EE+AEGR  GGVV VAHNA+FDHKFL  E SR GF  FMMGQ+MGVV +VDSL  L+E S+WRQ  +D   P+ P NFKL  +FEHLYGY+MP AHNAMGDV GLE +LSAPGI+E WR VAS HP CQIPVPRSLA+LQAAT  A+  R+R  P+ R  +  +R  Y+  RR G
Sbjct:  419 MDGSGSCRSLRMFRLLQGDVGSGKTAVAFLAMLRAAGQGSQSCMLAPTEVLTGQHLQTLRSMAEGIERPDGKGNLRVELLTGSVKGKSRQQLLNDVKAGEVDILVATHAVLTSASTAFRDLGLAVVDEEQRFGVEQRDKLTGFAQHVLYLSATPIPRSLTLALYGDMEISQIREMPRGAANIETTLVPVAKAKEVMDRLKGREDTDDKARCGVFWVLPQINKSESSARQHLASATERYDALVKELGEDRVTLLHGKMTSAEKNRRLSEFSGGEKGKGLRVLVSTSIIEVGVDVPRAGVCVVENAEMFGLSQLHQLRGRLGRTDRGKRERSTTAPTGSLQQPATPEEDPSQDKRQTSHCILLYGPDVGNDATERLKAVRKTRDGFLLAERDLALRGPGEVLGMRQKGYIEGKFKVADLARQGSLAEHASKRARRLVESWTPRG----------AAAAADTEDAAASGAPRKGGT-VALKEGGPGADCDE---------EGGRPESLGLLLVLCGLGADAEALLSGF---ASRTPL------PGAADGDAAGVVAGGEADRGAEAIEREAKEHAPERATEFPQSLPVAAATPDGVESLITSTPAADPPLAASSSTPDF---VVRAEATAGV---GGVLDSRTTTGPDSRSK-EPGPELAVPAAVYFDDEADFLEKSASEYAEMMEDQDEEDEYLSGFSFAPPLQPXXXXXXXXXXXXXXXXXXXXXFSGGVAPTGTPVGGXXGAPS------GEGVA----IIRRADLSEGTHTVVVVDVETTGLRAKEDRVIQLAAKVLGSENPRHSFAEYIDPGVVGVPPRVREITGITPEILAANGARPFPQVWPEFAAWLSGVVAEEQAEGRGEGGVVFVAHNAQFDHKFLKEELSRCGFSRFMMGQDMGVVCIVDSLRCLKENSLWRQKASDFHMPTRPKNFKLGGVFEHLYGYEMPNAHNAMGDVVGLERILSAPGINEGWRGVASSHPACQIPVPRSLAELQAATNIAA--RSRKPPARRTKADGWR--YYNNRRTG 1400          
BLAST of mRNA_L-elsbetiae_contig1308.2431.1 vs. uniprot
Match: A0A4D9CQG2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CQG2_9STRA)

HSP 1 Score: 368 bits (944), Expect = 1.370e-105
Identity = 336/1047 (32.09%), Postives = 468/1047 (44.70%), Query Frame = 0
Query:   11 RMFRLLQGDVGSGKTAVAFLAMLRAAGEGSQSCMLAPTEVLTVQHLRTLRSMAEGIE---------------------------RP-----------DGEGN---LRVELLTGHIK-GKARQLLLDDVKAGKVDILVATHAVLTSASTAFRDLGLAVVDEEQRFGVEQRDKLTGFAQHVLYLSATPIPRSLTLALYGDMEISQIREMPQGAAEIVTTLIPVAKVKDIVARLKD----------------------------QEDTDGKSDSGSRQY-LASAVERYEALVEELGEDRVSLLHGKMTSAEKNKRLSEFSAVEKGKGLRVLVSTSIIEVGVDVPRAAVCVVENAEMFGLSQLHQLRGRLGRTNRGKKGETATAASPPPLATPEEMPQEKRQTSHCILLYGPDITGD--ATERLKAIRATRDGFLLAERDLALRGPGEVLGVRQKGYVEGKFKVADLARQGSLADHANRRARQLVESWVVRGDGXXXXDDVVTTPAEGR--EGSGVDGDVHQGAAAVAARDXXXXXXXXXXXXXXXXXXERGHPQSLGLLFALCGFDADAEALLCGFEA-PASWPPLLFSPSLPPXXXGVASGAVATAAATGVERREETADIWSEPGGEQEGEVGRGSVAASEGNELPSSVPPAAYSLLDYEEAAVEGEAAAGARVEAGDLPEITGQQRQERGRREQRPDAAMPAAYFDDEADFLEKSASEYAELMVDQEEDKEYLSGLYFAPPPT--DEASKLATDGPRPPSQPFAASAGVVWPRGTAPGGSGGTDDTRPPREGEGVGAEPGIIRRANLLEGGQTIVLIDVETTGLGPRNDRVIQLAGKVL------GSEDPRH-------------------LYSAYVDPDGAYLSPRIRELTGISPEVLSDNNARVFREVWQDFASWLSEISVEEEAEGRSNGGVVLVAHNAKFDHKFLAAEQSRGGFDNFMMGQEMGVVAVVDSLAVLREKSIWRQNPADLARPSTPPNFKLAVLFEHLYGYKMPGAHNAMGDVHGLESVLSAPGISERWRAVASDH 954
            RM RLLQGDVG+GKT  A L MLRA   G Q+ MLAPTE+L  QH  TL+ ++ G++                           RP           +GEG    LR+E+LT + K GKAR+ LL++++ G++DIL+ TH++L S    FRDLGL V+DEE RFGV QR+KL+    +VLY+SATPIPR+L L  YGDME+S++ E P    ++ T++ P+  +  I  RL+                             +E  + + ++G     + S  +R++A+VE LGE+ V ++HG+M S  K + L +FSA       RVLVSTS++EVGVDVP A VC+VE+AE FGLSQLHQLRGR+GR      G   +A +       +    ++    HC+L Y         A +RL  ++ T DGF +AE+DL LRGPGEVLG RQ G+    F++ DLA+   L D AN+ AR   +S V R +G       V   A G   E  GV                                                      E LL  FEA P+S    +   S P  XX      V+T       + +  + + S        ++  G V+  +        PP   SL   + A +     A A     DLP                     P        D  E S                        PPP+  DE  +       P ++P  ++   +             DD   PR    + AE              T ++ D ETTGL   ++R+IQLA KVL      G ED                      L++ YVDP G ++  +I E+TGIS E L    AR F EVW DF  W++ +        R    VVLVAHNA FDHK L  +  R   D  +  +E  +V ++D+LAV R   IW +   D   P  P  F+   L+ +L    +  AH+A GDV GLE++L  P ++++WR+  S H
Sbjct:  395 RMVRLLQGDVGTGKTLCALLGMLRAIEGGWQAAMLAPTEILAFQHKDTLQELSRGLKVQVREMEAVEETRGISAHTDGGSQSGSRPGDDAQRLGGSEEGEGAWRPLRIEVLTSNSKRGKARKALLEELRRGEIDILIGTHSLL-SDEVVFRDLGLTVIDEEHRFGVRQREKLSNDT-NVLYMSATPIPRTLLLTNYGDMEVSRLDEAPARDVQVTTSIFPLTSLVQIAERLRKKILENSGEKVFWVLPCIEEKRSSDKDRTEEGEEKRGEAGEECVKITSVTQRHQAMVELLGEELVGMVHGRMDSESKLQALRDFSAGVT----RVLVSTSVVEVGVDVPDATVCIVEHAEYFGLSQLHQLRGRIGR------GYAVSAKA-------DRKAMDQLTECHCVLAYDDTSPNKEKALQRLLTLKKTVDGFEIAEQDLKLRGPGEVLGNRQSGHKG--FRLVDLAKHEGLLDEANQVARAHADSVVRREEGC-----TVEAVAHGNILEYEGV------------------------------------------------------ETLLRIFEAKPSSSGENIQKESRPSSXXXXXXXKVST-------QSKNNSLLESTASXXXXXKLSMGGVSKKK--------PPT--SLQKSKSAPIANACTAPAPSSISDLP---------------------PGWTTVTYGDRFEIST-----------------------PPPSSGDEEIEGGELTLMPGTEPVLSTRFSI-------------DDLPIPRVSIDLEAED------------VTFIIFDTETTGLRAESERIIQLAAKVLSPSDWGGGEDDEQANQLAAAGLASGGEPEDGLLFNGYVDP-GFWIPAKITEITGISNEFLFRQRARRFEEVWPDFLRWVNAV--------RGGKPVVLVAHNAGFDHKMLMFDLRRSNLDERVFKEETQIVGMMDTLAVFRGDEIWSRRSGD-GLPIKPNTFRQGALYRYLLRDDLQNAHSAKGDVLGLEALLKHPFVNKKWRSAGSAH 1265          
BLAST of mRNA_L-elsbetiae_contig1308.2431.1 vs. uniprot
Match: A0A836CEI0_9STRA (ATP-dependent DNA helicase RecG n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEI0_9STRA)

HSP 1 Score: 360 bits (924), Expect = 3.550e-102
Identity = 359/1124 (31.94%), Postives = 492/1124 (43.77%), Query Frame = 0
Query:   11 RMFRLLQGDVGSGKTAVAFLAMLRAAGEGSQSCMLAPTEVLTVQHLRTLRSMAEGIERPDGEGNLRVELLTGHIKGKARQLLLDDVKAGKVDILVATHAVLTSA---------------------------STAFRDLGLAVVDEEQRFGVEQRDKLTGFAQH----------------------------VLYLSATPIPRSLTLALYGDMEISQIREMPQGAAEIVTTLIPVAKVKDI--------------VARLKDQEDTDGKSDSGSRQYLASAVERYEALVEELGEDRVSLLHGKMTSAEKNKRLSEFSAVEKGKGLRVLVSTSIIEVGVDVPRAAVCVVENAEMFGLSQLHQLRGRLGRTNRGKKGET------ATAASPPPLATPEEMPQEKRQTSHCILLYGPDITGDATERLKAIRATRDGFLLAERDLALRGPGEVLGVRQKGYV---EGKFKVADLARQGSLADHANRRARQLVESWVVRGDGXXXXDDVVTTP------------------AEG----REGSGVDGDVHQGAAAVAARDXXXXXXXXXXXXXXXXXXERGHPQSLGLLFA-LCGFDADAEALLCGFEAPASWPPLLFSPSLPPXXXGVASGAVATAAATGVERREETADIWSEPGGEQEGEVGRGSVAASEGNELPSSVPPAAYSLLDY----------------------------------------------------------------------EEAAVEGEAAAGARVEAGDLPEITGQ----QRQERGRREQRPDAAMPAAYFDDEADFLEKSASEYAELMVDQEEDKEYLSGLYFAPPPTDEASKLATDGPRPPSQPFAASAGVVWPRGTAPGGSGGTDDTRPPREGEGVGAEPGIIRRANLLEGGQTIVLIDVETTGLGPRNDRVIQLAGKVLGSEDPRHL----YSAYVDPDGAYLSPRIRELTGISPEVLSDNNARVFREVWQDFASWLSEISVEEEA-EGRSNGG--VVLVAHNAKFDHKFLAAEQSRGGFDNFMMGQEMGVVAVVDSLAVLREKSIWRQNPADLARPSTPPNFKLAVLFEHLYGYKMPGAHNAMGDVHGLESVLSAPGISERWRAVAS 952
            RM RLLQGDVGSGKT VA +A+LR    G Q C+LAPTEVL  QH  T+  + +   R  GEG +RV LLTG ++G+ R  +L +++ G +D+LV THAV   A                                 LGLAVVDEEQRFGV QR+ L     H                            VLY+SATP PR+L+L  +GD++++ +RE P+GA++ V T + V +V+ I              V  L  +  + G   +  R +LASA  R+ +L E LGE+RV LLHG+MT+AEKN+ L+ F+  E G  +RVLV+T+IIEVGVD+P A VCV+ENAE FGLSQLHQ+RGR+GR+              ATA S       E          HC+LLY       A  RLK +  T DGF +AE DL LRGPGE+LGVRQKG++    G F+V DL +  +L   A+  AR+LVE+   R   XXXX      P                  A+G    + G G    +     A+  +        XXXXXXXXX  E+   + +GL  A   G DA   ALL                       GV  G  A+      E R+  A   S+                                                                                                           E  V  EA    RVE   +PE T +       ER         A P   F++ +D+   + ++  E +V    D ++LS     P P  +A  L                    P  +A G       + PP +               L       V++DVETTG     DRV+Q+A  VL  +    L    ++ Y DP   Y+S +I+ LTGI+P++L    A  F + WQ F +WL+  + + +A  G +  G  +VL+AHNA FDH FL AE  R G  +  +    G+ A VDS+A+++++ +WRQ   D      PP  KL  ++E+L G K+  AHNAM DV  L +V++   + +RWR +AS
Sbjct:  371 RMVRLLQGDVGSGKTLVALVALLRVVEAGLQGCLLAPTEVLAAQHAGTIARLCD---RHLGEGRVRVGLLTGAVRGRERAAVLSELREGAIDVLVGTHAVYGPAVHFKAXXXXXXXXXXXXXXXXXXXXXXXXXXXALGLAVVDEEQRFGVAQREALVNGKSHTTPTAAIANSADDSNSDSHLPPRQLQCHVLYMSATPTPRTLSLTAFGDVDVALLREKPRGASQHVQTTLTVERVRAILDDPATAHADKVFWVLPLVQEAPSGG---TRRRAHLASAERRHASLAEALGEERVGLLHGRMTAAEKNRVLARFA--EPGSPMRVLVATTIIEVGVDIPEARVCVIENAEQFGLSQLHQMRGRIGRSGXXXXXXXXXXXXXATARSDAAARAVEGA----AAACHCVLLYHESAGEVAVRRLKVMSETTDGFAIAEEDLKLRGPGELLGVRQKGFLFGGAGGFRVCDLDKHAALVPPAHAHARRLVEAAGARSXXXXXXXXGDVRPLCALHLLSALFQSGAGAEAQGSSAQQAGGGKRPAIAANGVALPVKGARKAGSGXXXXXXXXXEQEQDVVRGVGLEVAHALGLDA---ALLSSEPT-----------------HGV--GQHASDGGDATESRQLLAAALSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTSETTVVSEAL---RVELF-IPERTSRALPTSATERAAXXXXXXXAWP---FENLSDY---APADDEEDVVASTSDNDWLSFSELPPIPR-QAGGLRLK---------------AAPSASARGSKAADTPSLPPLD---------------LTSEEHMFVVLDVETTGFSFAYDRVLQIAAAVLSVDGGGALQHGHFNMYCDP-AKYISAKIQGLTGITPQLLRSKGAVKFPQAWQQFQAWLNAAAAQHKATNGNATSGTSIVLIAHNANFDHGFLVAETERAGLGSDAISSA-GITAFVDSVALVKDRDLWRQAGMD-----PPPTNKLTDVYEYLEGRKVSDAHNAMADVIALATVVNGSVLRDRWREMAS 1412          
BLAST of mRNA_L-elsbetiae_contig1308.2431.1 vs. uniprot
Match: W7TB29_9STRA (Atp-dependent dna helicase (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TB29_9STRA)

HSP 1 Score: 340 bits (871), Expect = 2.120e-98
Identity = 303/1016 (29.82%), Postives = 439/1016 (43.21%), Query Frame = 0
Query:   39 GSQSCMLAPTEVLTVQHLRTLRSMAEGIE---------------------------RP-----------DGEGN---LRVELLTGHIK-GKARQLLLDDVKAGKVDILVATHAVLTSASTAFRDLGLAVVDEEQRFGVEQRDKLTGFAQHVLYLSATPIPRSLTLALYGDMEISQIREMPQGAAEIVTTLIPVAKVKDIVARLKD----------------------------QEDTDGKSDSGSRQY-LASAVERYEALVEELGEDRVSLLHGKMTSAEKNKRLSEFSAVEKGKGLRVLVSTSIIEVGVDVPRAAVCVVENAEMFGLSQLHQLRGRLGRTNRGKKGETATAASPPPLATPEEMPQEKRQTSHCILLYGPDITGD--ATERLKAIRATRDGFLLAERDLALRGPGEVLGVRQKGYVEGKFKVADLARQGSLADHANRRARQLVESWVVRGDGXXXXDDVVTTPAEGREGSGVDGDVHQGAAAVAARDXXXXXXXXXXXXXXXXXXERGHPQSLGLLFALCGFDADAEALLCGFEAPASWPPLLFSPSLPPXXXGVASGAVATAAATGVERREETADIWSEPGGEQEGEVGRGSVAASEGNELPSSVP--PAAYSLLDYEEAAVEGEAAAGARVEAGDLPEITGQQRQERGRREQRPDAAMPAAYFDDEADFLEKSASEYAELMVDQEEDKEYLSGLYFAPPPTDEASKLATDGPRPPSQPFAASAGVVWPRGTAPGGSGGTDDTRPPREGEGVGAEPGIIRRANLLEGGQTIVLIDVETTGLGPRNDRVIQLAGKVL------GSEDPRH-------------------LYSAYVDPDGAYLSPRIRELTGISPEVLSDNNARVFREVWQDFASWLSEISVEEEAEGRSNGGVVLVAHNAKFDHKFLAAEQSRGGFDNFMMGQEMGVVAVVDSLAVLREKSIWRQNPADLARPSTPPNFKLAVLFEHLYGYKMPGAHNAMGDVHGLESVLSAPGISERWRAVASDH 954
            G Q+ MLAPTE+L  QH  TL+ ++ G++                           RP           +GEG    LR+E+LT + K GKAR++LL++++ G++DIL+ TH++L S    FRDLGL V+DEE RFGV QR+KL+    +VLY+SATPIPR+L L  YGDME+S++ E P    ++ T++ P+  +  I  RL+                             +E  + + ++G     + S  +R++A+VE LGE+ V ++HG+M S  K + L +FSA       RVLVSTS++EVGVDVP A VC+VE+AE FGLSQLHQLRGR+GR      G   +A +       +    ++    HC+L Y         A +RL  ++ T DGF +AE+DL LRGPGEVLG RQ G+    F++ DLA+   L D AN+ AR   +S V R                  EG+ V+   H         +                      P S                 L   E  AS          P     ++ G        G+ +++    +       +   +     A +     PSS+   P  ++ + Y           G R E    P  +G +  E G                              EL +                               P ++P  ++   +             DD   PR    + AE              T ++ D ETTGL   ++R+IQLA KVL      G ED                      L++AYVDP G ++  +I E+TGIS E L    AR F EVW DF  W++ +        R    VVLVAHNA FDHK L  +  R   D  +  +E  +V ++D+LAV R   IW +   D   P  P  F+   L+ +L    +  AH+A GDV GLE++L  P ++++WR+  S H
Sbjct:    5 GWQAAMLAPTEILAFQHKDTLQELSRGLKVQIREREAVEETRGTSAHTDGGSQSGSRPGDDAQRLGGSEEGEGAWRPLRIEVLTSNSKRGKARKVLLEELRRGEIDILIGTHSLL-SDEVVFRDLGLTVIDEEHRFGVRQREKLSNDT-NVLYMSATPIPRTLLLTNYGDMEVSRLDEAPARDVQVTTSIFPLTSLVQIAERLRKKILENSGEKVFWVLPCIEEKRSSDKDRTEEGEEKRGEAGEECVKITSVTQRHQAMVELLGEELVGMVHGRMDSESKLQALRDFSAGVT----RVLVSTSVVEVGVDVPDATVCIVEHAEYFGLSQLHQLRGRIGR------GYAVSAKA-------DRKVMDQLTECHCVLAYDDTSPNKEKALQRLLTLKKTVDGFEIAEQDLKLRGPGEVLGNRQSGHKG--FRLVDLAKHEGLLDEANQVARAHADSVVRR-----------------EEGATVEAVAHGNVLEYEGVETLLRIFEAKPPSSGENIQRESQPSSXXXXXXXXXXXXSKNKFL--LEPTAS----------PSSSMKLSMG--------GMSKKKPPTSLQKS----KSAPIANACTAPA-----PSSISDLPPGWTTVTY-----------GDRFEISTPPPSSGDEENEGG------------------------------ELTL------------------------------MPGTEPVLSTRFSI-------------DDLPIPRVSIDLEAED------------VTFIIFDTETTGLRAESERIIQLAAKVLSPSNWGGEEDDEQANELVAAGLACGGEPEDGLLFNAYVDP-GFWIPAKITEITGISNEFLFRQRARRFEEVWPDFLRWVNAV--------RGGKPVVLVAHNAGFDHKMLMFDLRRSNLDERVFKEETQIVGMMDTLAVFRGDEIWSRRSGD-GLPIKPNTFRQGALYRYLLRDDLKNAHSAKGDVLGLEALLKHPFVNKKWRSAGSAH 847          
BLAST of mRNA_L-elsbetiae_contig1308.2431.1 vs. uniprot
Match: R6J7Z3_9PROT (ATP-dependent DNA helicase RecG n=1 Tax=Azospirillum sp. CAG:239 TaxID=1262705 RepID=R6J7Z3_9PROT)

HSP 1 Score: 306 bits (785), Expect = 5.270e-88
Identity = 191/426 (44.84%), Postives = 260/426 (61.03%), Query Frame = 0
Query:    8 SSLRMFRLLQGDVGSGKTAVAFLAMLRAAGEGSQSCMLAPTEVLTVQHLRTLRSMAEGIERPDGEGNLRVELLTGHIKGKARQLLLDDVKAGKVDILVATHAVLTSASTAFRDLGLAVVDEEQRFGVEQRDKLT--GFAQHVLYLSATPIPRSLTLALYGDMEISQIREMPQGAAEIVTTLIPVAKVKDIVARLKDQEDTDGKSDSGSRQY-------------LASAVERYEALVEELGEDRVSLLHGKMTSAEKNKRLSEFSAVEKGKGLRVLVSTSIIEVGVDVPRAAVCVVENAEMFGLSQLHQLRGRLGRTNRGKKGETATAASPPPLATPEEMPQEKRQTSHCILLYGPDITGDATERLKAIRATRDGFLLAERDLALRGPGEVLGVRQKGYVEGKFKVADLARQGSLADHANRRARQLV 418
            S  RM RLLQGDVGSGKT VA ++ML A   G+Q+ ++APTE+L  QHL T++ + E I        +R ELLTG IKGKAR  +L+D++AGK+DIL+ THA+   A T F+DL   VVDE+ RFGV QR  L+  G    +L ++ATPIPR+L L  YGDME S+I + P+G   + T ++P++K++D+ A LK       K + G R Y             LA+AVER++ L +  G + V L+HGKM   EK+  +  F A E    L+VLV+T++IEVGV+VP A V V+E+AE FGL+QLHQLRGR+      K+G                      Q S CILLY   ++  + ERL  +R T DGFL+AE+DL LRG GE+LG RQ G+ E  F++AD+     L   AN+ A+ +V
Sbjct:  283 SPYRMLRLLQGDVGSGKTIVALMSMLNAVECGTQAAIMAPTEILAKQHLETMQPLCEEI-------GIRAELLTGRIKGKARARILEDLEAGKIDILIGTHALFVEAVT-FKDLACVVVDEQHRFGVHQRLALSDKGNKPDILVMTATPIPRTLVLTAYGDMEYSKIDQPPKGRKPVDTRVLPISKLQDVAAALKR------KIEQGCRAYWVCPLVEESEKVDLAAAVERFDTLRKIFGGE-VGLVHGKMKEKEKDAVMERFKAGE----LKVLVATTVIEVGVNVPEATVMVIEHAERFGLAQLHQLRGRI------KRGF---------------------QASTCILLYAYPLSETSRERLNIMRETEDGFLIAEKDLELRGGGEILGTRQSGFCE--FRIADMNEHKHLLYTANKDAQMIV 660          
BLAST of mRNA_L-elsbetiae_contig1308.2431.1 vs. uniprot
Match: A0A7W9ZG52_NOVIT (ATP-dependent DNA helicase RecG n=2 Tax=Novispirillum itersonii TaxID=189 RepID=A0A7W9ZG52_NOVIT)

HSP 1 Score: 303 bits (775), Expect = 1.470e-86
Identity = 190/414 (45.89%), Postives = 256/414 (61.84%), Query Frame = 0
Query:   11 RMFRLLQGDVGSGKTAVAFLAMLRAAGEGSQSCMLAPTEVLTVQHLRTLRSMAEGIERPDGEGNLRVELLTGHIKGKARQLLLDDVKAGKVDILVATHAVLTSASTAFRDLGLAVVDEEQRFGVEQRDKLT--GFAQHVLYLSATPIPRSLTLALYGDMEISQIREMPQGAAEIVTTLIPVAKVKDIVARLKDQEDTDGKS-------DSGSRQYLASAVERYEALVEELGEDRVSLLHGKMTSAEKNKRLSEFSAVEKGKGLRVLVSTSIIEVGVDVPRAAVCVVENAEMFGLSQLHQLRGRLGRTNRGKKGETATAASPPPLATPEEMPQEKRQTSHCILLYGPDITGDATERLKAIRATRDGFLLAERDLALRGPGEVLGVRQKGYVEGKFKVADLARQGSLADHANRRAR 415
            RM RL+QGDVGSGKT VA +AML A   GSQ+ ++APTE+L  QH  TL  +AE I        +R+ +LTG  KGK R  LL+ + AG++DILV THA+  S    FRDLGLAV+DE+ RFGV+QR +LT  G    VL ++ATPIPR+LTL LYGDM++S++ E P G   + T L+ ++++++++A +        K        +      LA+A ER+ A++++L   R+ L+HGKM +AEK+  ++ FS    G GL VLV+T++IEVGV+VP A V V+E+AE FGL+QLHQLRGR+GR   G K  T                        C+LLYG  ++     RL+ +R + DGFL+AE DL LRG GEVLG RQ G  E  F+VADLA  G L   A   AR
Sbjct:  288 RMLRLVQGDVGSGKTVVALMAMLNAVECGSQAALMAPTEILARQHAETLHPLAEAI-------GIRLAVLTGRDKGKPRAALLEALAAGEIDILVGTHALFQS-DVQFRDLGLAVIDEQHRFGVQQRLELTAKGRMTDVLVMTATPIPRTLTLTLYGDMDVSKLDEKPPGRKPVDTRLVSLSRLEEVMAGVGRAVAAGAKVYWVCPLVEESETSDLAAAEERH-AVLQDLYGSRIGLVHGKMKAAEKDAVMAAFS----GDGLDVLVATTVIEVGVNVPAATVMVIEHAERFGLAQLHQLRGRIGR---GDKAST------------------------CLLLYGGPLSETGKARLEIMRQSEDGFLIAEEDLRLRGGGEVLGTRQSGLPE--FRVADLAVHGELLATARDDAR 659          
BLAST of mRNA_L-elsbetiae_contig1308.2431.1 vs. uniprot
Match: R5Q3I9_9PROT (ATP-dependent DNA helicase RecG n=1 Tax=Acetobacter sp. CAG:977 TaxID=1262685 RepID=R5Q3I9_9PROT)

HSP 1 Score: 299 bits (765), Expect = 1.480e-85
Identity = 188/421 (44.66%), Postives = 253/421 (60.10%), Query Frame = 0
Query:    8 SSLRMFRLLQGDVGSGKTAVAFLAMLRAAGEGSQSCMLAPTEVLTVQHLRTLRSMAEGIERPDGEGNLRVELLTGHIKGKARQLLLDDVKAGKVDILVATHAVLTSASTAFRDLGLAVVDEEQRFGVEQRDKLT--GFAQHVLYLSATPIPRSLTLALYGDMEISQIREMPQGAAEIVTTLIPVAKVKDIVARLKDQEDTDGKS--------DSGSRQYLASAVERYEALVEELGEDRVSLLHGKMTSAEKNKRLSEFSAVEKGKGLRVLVSTSIIEVGVDVPRAAVCVVENAEMFGLSQLHQLRGRLGRTNRGKKGETATAASPPPLATPEEMPQEKRQTSHCILLYGPDITGDATERLKAIRATRDGFLLAERDLALRGPGEVLGVRQKGYVEGKFKVADLARQGSLADHANRRARQLV 418
            S  RM RL+QGDVGSGKTAVA LAML AA  G+Q+ ++APT++L  QH   +R++AE I        +R  LLTG  KGK R  +L+ +++G   I++ THA+       F+DL L VVDE+ +FGV+QR  L+  G    +L ++ATPIPR+L L  YGDME+S+I E+P G   I T ++P +++ D VAR   +   DG          +   +  LA+A +RYE L    G DRV L+HGKM SAEK++ +  F++        +LV+T++IEVGVDVP A V V+E+AE FGL+QLHQLRGR+GR   G K                         S C+LLYG  ++  A  RLK +R T+DGFL+AE DL LRG GEVLG RQ G  E  FK+ADL+  G L   A   A+ +V
Sbjct:  245 SPSRMLRLVQGDVGSGKTAVALLAMLNAAETGAQAALMAPTDILANQHFEKIRNIAEPI-------GVRCVLLTGRNKGKKRAEILESIRSGNAGIIIGTHALFQD-DVIFKDLALTVVDEQHKFGVQQRLALSSKGGGADMLVMTATPIPRTLALTYYGDMEVSRIDELPPGRKPITTRVLPSSRL-DEVARALSRTVADGNKAYWVCPLVEESEKIDLAAAQKRYEYLKARFG-DRVVLVHGKMKSAEKDEAMQRFAS----NSADILVATTVIEVGVDVPAATVMVIEHAERFGLAQLHQLRGRIGR---GTK------------------------ESSCLLLYGEPLSETAKARLKVMRETQDGFLIAEEDLTLRGAGEVLGTRQSGLEE--FKIADLSVHGDLLKTARNDAKYIV 622          
BLAST of mRNA_L-elsbetiae_contig1308.2431.1 vs. uniprot
Match: A0A3M1JVB7_9PROT (ATP-dependent DNA helicase RecG n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M1JVB7_9PROT)

HSP 1 Score: 300 bits (767), Expect = 1.930e-85
Identity = 190/419 (45.35%), Postives = 257/419 (61.34%), Query Frame = 0
Query:   12 MFRLLQGDVGSGKTAVAFLAMLRAAGEGSQSCMLAPTEVLTVQHLRTLRSMAEGIERPDGEGNLRVELLTGHIKGKARQLLLDDVKAGKVDILVATHAVLTSASTAFRDLGLAVVDEEQRFGVEQRDKLT--GFAQHVLYLSATPIPRSLTLALYGDMEISQIREMPQGAAEIVTTLIPVAKVKDIVARLKDQEDTDGKS-DSGSRQY-------------LASAVERYEALVEELGEDRVSLLHGKMTSAEKNKRLSEFSAVEKGKGLRVLVSTSIIEVGVDVPRAAVCVVENAEMFGLSQLHQLRGRLGRTNRGKKGETATAASPPPLATPEEMPQEKRQTSHCILLYGPDITGDATERLKAIRATRDGFLLAERDLALRGPGEVLGVRQKGYVEGKFKVADLARQGSLADHANRRA 414
            M RL+QGDVGSGKT VA LAML A   G+Q+ +LAPTE+L  QH  TL  +A           +R+ LLTG  KGK+R+ +LDD+ +G++DILV THA++     AFRDLGLAV+DE+ RFGV QR KLT  G    VL ++ATPIPR+L+L  YGDM++S+I E P G   + T  IP A++ D+VA +       G++  SG+R Y             +A+A  RY+AL    G D+V L+HGKM +AE++  +++F+A      + +LV+T++IEVGVDVP A + V+E+AE FGL+QLHQLRGR+GR      G+ +T                      C+LLY   ++  A  RL+ +R T DGF +AE DL LRGPGEVLG RQ G  E  F++ADLA    L   A + A
Sbjct:  288 MLRLVQGDVGSGKTLVALLAMLIAVEAGAQAALLAPTEILARQHAATLAPLAAA-------AGVRLALLTGRDKGKSRRAILDDLASGEIDILVGTHALI-ERDVAFRDLGLAVIDEQHRFGVHQRLKLTSKGRGVDVLVMTATPIPRTLSLTAYGDMDVSRIIEKPPGRKPVETRTIPAARLDDVVAAI-------GRALKSGARAYWVCPLVEESETSDMAAAEARYKALKAIYG-DQVGLVHGKMKAAERDAVMADFAAGR----IALLVATTVIEVGVDVPEATIMVIEHAERFGLAQLHQLRGRVGRG-----GDRST----------------------CLLLYAGPLSETARARLRTMRETDDGFRIAEEDLRLRGPGEVLGTRQSGLPE--FRIADLAHHEDLLATARKDA 657          
BLAST of mRNA_L-elsbetiae_contig1308.2431.1 vs. uniprot
Match: A0A6M8VV20_9PROT (ATP-dependent DNA helicase RecG n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A6M8VV20_9PROT)

HSP 1 Score: 299 bits (766), Expect = 2.670e-85
Identity = 187/418 (44.74%), Postives = 247/418 (59.09%), Query Frame = 0
Query:   10 LRMFRLLQGDVGSGKTAVAFLAMLRAAGEGSQSCMLAPTEVLTVQHLRTLRSMAEGIERPDGEGNLRVELLTGHIKGKARQLLLDDVKAGKVDILVATHAVLTSASTAFRDLGLAVVDEEQRFGVEQRDKLTGFAQH--VLYLSATPIPRSLTLALYGDMEISQIREMPQGAAEIVTTLIPVAKVKDIVARLKDQEDTDGKS-------DSGSRQYLASAVERYEALVEELGEDRVSLLHGKMTSAEKNKRLSEFSAVEKGKGLRVLVSTSIIEVGVDVPRAAVCVVENAEMFGLSQLHQLRGRLGRTNRGKKGETATAASPPPLATPEEMPQEKRQTSHCILLYGPDITGDATERLKAIRATRDGFLLAERDLALRGPGEVLGVRQKGYVEGKFKVADLARQGSLADHANRRARQLV 418
            +RM RLLQGDVGSGKT VAF AML A   G+Q+ ++APTE+L  QH +T+   A  +        L   +LTG  KGKARQ +L+ +  G   I++ THA+       F DLGLAVVDE+ RFGV QR KL G  +   +L ++ATPIPR+LTL  YGDM+ S++ E P G   I T L+  A+++++VA LK + +TD ++       +      LA+A ER+  L +  G DR  LLHG+M +AEK+  +  F A E    + VLVST++IEVGVDVP A V V+E+AE FGLSQLHQLRGR+GR++                           + S CIL+Y P I     +RL  IR T DGFL+AE DL LRG GE+LG RQ G  E  FK+A+L     L   A   AR ++
Sbjct:  286 MRMLRLLQGDVGSGKTVVAFFAMLNAVASGAQAALMAPTEILAQQHSKTISDYAATL-------GLETVILTGRHKGKARQEILEKIADGSAKIIIGTHALFQD-DVIFHDLGLAVVDEQHRFGVHQRLKLAGKGKDCDILVMTATPIPRTLTLTAYGDMDFSRLDEKPAGRKPIDTRLVSTARLEEVVAGLKRKIETDARAYWICPLVEESEVMDLAAAEERWLTLQQVFG-DRTGLLHGRMNAAEKDAVMQRFVAGE----IDVLVSTTVIEVGVDVPEATVMVIEHAERFGLSQLHQLRGRVGRSD---------------------------EESACILVYDPKIGETGKKRLTTIRNTEDGFLIAEEDLKLRGAGELLGTRQSGMPE--FKLANLHDHARLVKIARDDARLII 661          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1308.2431.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPN7_ECTSI0.000e+061.84ATP-dependent DNA helicase RecG n=1 Tax=Ectocarpus... [more]
A0A6H5JXY9_9PHAE0.000e+062.02ATP-dependent DNA helicase RecG n=1 Tax=Ectocarpus... [more]
A0A4D9CQG2_9STRA1.370e-10532.09Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A836CEI0_9STRA3.550e-10231.94ATP-dependent DNA helicase RecG n=1 Tax=Tribonema ... [more]
W7TB29_9STRA2.120e-9829.82Atp-dependent dna helicase (Fragment) n=1 Tax=Nann... [more]
R6J7Z3_9PROT5.270e-8844.84ATP-dependent DNA helicase RecG n=1 Tax=Azospirill... [more]
A0A7W9ZG52_NOVIT1.470e-8645.89ATP-dependent DNA helicase RecG n=2 Tax=Novispiril... [more]
R5Q3I9_9PROT1.480e-8544.66ATP-dependent DNA helicase RecG n=1 Tax=Acetobacte... [more]
A0A3M1JVB7_9PROT1.930e-8545.35ATP-dependent DNA helicase RecG n=1 Tax=Alphaprote... [more]
A0A6M8VV20_9PROT2.670e-8544.74ATP-dependent DNA helicase RecG n=1 Tax=Proteobact... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 6..183
e-value: 6.9E-13
score: 58.8
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 5..172
score: 18.708
IPR013520Exonuclease, RNase T/DNA polymerase IIISMARTSM00479exoiiienduscoord: 744..949
e-value: 2.5E-6
score: 37.0
IPR013520Exonuclease, RNase T/DNA polymerase IIIPFAMPF00929RNase_Tcoord: 746..874
e-value: 7.6E-13
score: 49.3
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 222..309
e-value: 6.9E-13
score: 58.8
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 226..308
e-value: 5.2E-11
score: 42.9
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 191..380
score: 12.65
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 743..946
e-value: 1.1E-31
score: 112.1
NoneNo IPR availableGENE3D3.40.50.300coord: 6..179
e-value: 2.0E-55
score: 189.3
NoneNo IPR availableGENE3D3.40.50.300coord: 181..377
e-value: 3.6E-29
score: 103.4
NoneNo IPR availablePANTHERPTHR14025:SF29TRANSCRIPTION-REPAIR-COUPLING FACTORcoord: 337..392
NoneNo IPR availablePANTHERPTHR14025:SF29TRANSCRIPTION-REPAIR-COUPLING FACTORcoord: 11..310
NoneNo IPR availablePANTHERPTHR14025FAMILY NOT NAMEDcoord: 337..392
NoneNo IPR availablePANTHERPTHR14025FAMILY NOT NAMEDcoord: 11..310
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 15..154
e-value: 1.4E-13
score: 51.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 14..318
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 743..938

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1308contigL-elsbetiae_contig1308:11452..21784 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1308.2431.1mRNA_L-elsbetiae_contig1308.2431.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1308 11437..21784 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1308.2431.1 ID=prot_L-elsbetiae_contig1308.2431.1|Name=mRNA_L-elsbetiae_contig1308.2431.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1008bp
MDGGGSCSSLRMFRLLQGDVGSGKTAVAFLAMLRAAGEGSQSCMLAPTEV
LTVQHLRTLRSMAEGIERPDGEGNLRVELLTGHIKGKARQLLLDDVKAGK
VDILVATHAVLTSASTAFRDLGLAVVDEEQRFGVEQRDKLTGFAQHVLYL
SATPIPRSLTLALYGDMEISQIREMPQGAAEIVTTLIPVAKVKDIVARLK
DQEDTDGKSDSGSRQYLASAVERYEALVEELGEDRVSLLHGKMTSAEKNK
RLSEFSAVEKGKGLRVLVSTSIIEVGVDVPRAAVCVVENAEMFGLSQLHQ
LRGRLGRTNRGKKGETATAASPPPLATPEEMPQEKRQTSHCILLYGPDIT
GDATERLKAIRATRDGFLLAERDLALRGPGEVLGVRQKGYVEGKFKVADL
ARQGSLADHANRRARQLVESWVVRGDGDGDGDDVVTTPAEGREGSGVDGD
VHQGAAAVAARDTSGGGGSGSRVDDGEEEEERGHPQSLGLLFALCGFDAD
AEALLCGFEAPASWPPLLFSPSLPPPPPGVASGAVATAAATGVERREETA
DIWSEPGGEQEGEVGRGSVAASEGNELPSSVPPAAYSLLDYEEAAVEGEA
AAGARVEAGDLPEITGQQRQERGRREQRPDAAMPAAYFDDEADFLEKSAS
EYAELMVDQEEDKEYLSGLYFAPPPTDEASKLATDGPRPPSQPFAASAGV
VWPRGTAPGGSGGTDDTRPPREGEGVGAEPGIIRRANLLEGGQTIVLIDV
ETTGLGPRNDRVIQLAGKVLGSEDPRHLYSAYVDPDGAYLSPRIRELTGI
SPEVLSDNNARVFREVWQDFASWLSEISVEEEAEGRSNGGVVLVAHNAKF
DHKFLAAEQSRGGFDNFMMGQEMGVVAVVDSLAVLREKSIWRQNPADLAR
PSTPPNFKLAVLFEHLYGYKMPGAHNAMGDVHGLESVLSAPGISERWRAV
ASDHPTCQIPVPRSLADLQAATQAASAPRARNKPSTRGGSVPFRRSYHTY
RRRGIGR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR013520Exonuclease_RNaseT/DNA_pol3
IPR001650Helicase_C
IPR036397RNaseH_sf
IPR011545DEAD/DEAH_box_helicase_dom
IPR027417P-loop_NTPase
IPR012337RNaseH-like_sf