mRNA_L-elsbetiae_contig13061.2420.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig13061.2420.1
Unique NamemRNA_L-elsbetiae_contig13061.2420.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig13061.2420.1 vs. uniprot
Match: D7FS70_ECTSI (Vacuolar protein sorting vps16 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS70_ECTSI)

HSP 1 Score: 365 bits (936), Expect = 2.210e-121
Identity = 183/205 (89.27%), Postives = 194/205 (94.63%), Query Frame = 1
Query:    1 QVLVDRLAVRHLHFLAIRVCDHLRLRRDRVVVHWACTKIAKACADGAAGKAGAPTDAELTREVVRKLQPCGQISYADVARAAERAGRRRLATMLLDLEPLASDQVPLLLSMGENELGLKKAILSGEDDLVYLSVMHIEQEAGSSEKGREAFCELMVNHPEALRLLKVYYREKGGYMERRKLHNLCVFSKQYLEAGDLAVRKAYTQ 615
            +VLVDRLA+RHLH LA+RVCDHLRLRRDRV VHWAC KIAKAC + +AG+ GAPTD +LTREVV KL+PCGQISYADVARAAER+GRRRLATMLLDLEPLASDQVPLLLSMGENELGLKKAILSGEDDLVYLSVMHIEQEAGSSEKGREAFCELM  HPEALRLLKVYYREKGGYMER+KLHNLCVFSKQYLEAG LA+RKAYTQ
Sbjct:  164 EVLVDRLAMRHLHLLAVRVCDHLRLRRDRVAVHWACKKIAKACNEASAGEPGAPTDDDLTREVVEKLRPCGQISYADVARAAERSGRRRLATMLLDLEPLASDQVPLLLSMGENELGLKKAILSGEDDLVYLSVMHIEQEAGSSEKGREAFCELMHAHPEALRLLKVYYREKGGYMERKKLHNLCVFSKQYLEAGTLAIRKAYTQ 368          
BLAST of mRNA_L-elsbetiae_contig13061.2420.1 vs. uniprot
Match: A0A6H5KVY1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVY1_9PHAE)

HSP 1 Score: 364 bits (934), Expect = 4.330e-118
Identity = 183/205 (89.27%), Postives = 193/205 (94.15%), Query Frame = 1
Query:    1 QVLVDRLAVRHLHFLAIRVCDHLRLRRDRVVVHWACTKIAKACADGAAGKAGAPTDAELTREVVRKLQPCGQISYADVARAAERAGRRRLATMLLDLEPLASDQVPLLLSMGENELGLKKAILSGEDDLVYLSVMHIEQEAGSSEKGREAFCELMVNHPEALRLLKVYYREKGGYMERRKLHNLCVFSKQYLEAGDLAVRKAYTQ 615
            +VLVDRLA+RHLH LA+RVCDHLRLRRDRV VHWAC KI KAC + +AG+ GAPTD +LTREVV KL+PCGQISYADVARAAER+GRRRLATMLLDLEPLASDQVPLLLSMGENELGLKKAILSGEDDLVYLSVMHIEQEAGSSEKGREAFCELM  HPEALRLLKVYYREKGGYMER+KLHNLCVFSKQYLEAG LAVRKAYTQ
Sbjct:  429 EVLVDRLAMRHLHLLAVRVCDHLRLRRDRVAVHWACKKITKACNEASAGEPGAPTDEDLTREVVEKLRPCGQISYADVARAAERSGRRRLATMLLDLEPLASDQVPLLLSMGENELGLKKAILSGEDDLVYLSVMHIEQEAGSSEKGREAFCELMHAHPEALRLLKVYYREKGGYMERKKLHNLCVFSKQYLEAGTLAVRKAYTQ 633          
BLAST of mRNA_L-elsbetiae_contig13061.2420.1 vs. uniprot
Match: F0WQI0_9STRA (Vacuolar protein sortingassociated protein putative n=2 Tax=Albugo TaxID=65356 RepID=F0WQI0_9STRA)

HSP 1 Score: 146 bits (368), Expect = 6.250e-37
Identity = 81/174 (46.55%), Postives = 113/174 (64.94%), Query Frame = 1
Query:    1 QVLVDRLAVRHLHFLAIRVCDHLRLRRDRVVVHWACTKIAKACA----DGAAGKAGAPTDAELTREVVRKLQPCGQISYADVARAAERAGRRRLATMLLDLEPLASDQVPLLLSMGENELGLKKAILSGEDDLVYLSVMHIEQEAGSSEKGREAFCELMVNHPEALRLLKVYYR 510
            +V + RL     HFLA+++C +L++  DRV+VHWAC K+    A     GA+ ++ A +D EL   V RKL+    +SYAD+A  AER  RRRLATM LDLE  ASDQVPLLLSMGE EL ++K+I S   DLV++++ H+E+   S E+ R       V + EA++LL +YY+
Sbjct:  483 EVAISRLVAFRQHFLALKICSYLKVSTDRVLVHWACEKVKSVAAAQEASGASSESQAQSDDELVSLVCRKLKTATSVSYADIASCAERVNRRRLATMFLDLEQNASDQVPLLLSMGEFELAIRKSIESNVTDLVFMTLFHLERTLPSLEELRYVLYRDPVMYKEAIQLLCLYYQ 656          
BLAST of mRNA_L-elsbetiae_contig13061.2420.1 vs. uniprot
Match: A0A484EFV2_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EFV2_BRELC)

HSP 1 Score: 145 bits (365), Expect = 1.560e-36
Identity = 81/171 (47.37%), Postives = 112/171 (65.50%), Query Frame = 1
Query:    1 QVLVDRLAVRHLHFLAIRVCDHLRLRRDRVVVHWACTKIAKACADGAAGKAGAPTDAELTREVVRKLQPCGQISYADVARAAERAGRRRLATMLLDLEPLASDQVPLLLSMGENELGLKKAILSGEDDLVYLSVMHIEQEAGSSEKGREAFCELMVNHPEALRLLKVYYRE 513
            +V+V RL   H HFLA+++C++L++  DRV+VHWAC K+  A +   A       D EL   V +KL+    +SYAD+A  AERA RRRLATM LDLE  ASDQVPLLLSMGE EL L+K++ S   DLVY+++ H+E+   S ++ R       + + EA+ L+ +YYRE
Sbjct:  476 EVVVSRLVAMHHHFLALKICEYLKIPTDRVLVHWACEKVKAATSSDVA-------DEELVALVRKKLKKATLVSYADIANCAERANRRRLATMFLDLEENASDQVPLLLSMGEFELALRKSLESNNTDLVYMTLFHLERTLPSMDEFRYVLNREPM-YAEAVNLMLLYYRE 638          
BLAST of mRNA_L-elsbetiae_contig13061.2420.1 vs. uniprot
Match: A0A836CCV0_9STRA (Vps16, N-terminal region-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCV0_9STRA)

HSP 1 Score: 144 bits (363), Expect = 3.160e-36
Identity = 95/224 (42.41%), Postives = 123/224 (54.91%), Query Frame = 1
Query:   52 RVCDHLRLRRDRVVVHWACTKIAKACADGAAGKAGAPTDAELTREVVRKLQPCG---------------QISYADVARAAERAGRRRLATMLLDLEPLASDQVPLLLSMGENELGLKKAILSGEDDLVYLSVMHIEQEA--------GS-------------SEKGREAFCELMVNHPEALRLLKVYYREKGGYMERRKLHNLCVFSKQYLEAGDLAVRKAYTQ 615
            R C HL+L  D V + WAC ++A  C D     A A +D E+ R+++R     G               + +YADVARAA   GRRRLAT+LLDLEPLA+DQV LLL+M E+EL L++A+ SG+ DL+ L ++  E           GS             SE  R A       HPEAL +LK YY  + G  ERR+LH LC F  Q+L+AG LAV+ AY Q
Sbjct:  772 RACQHLKLPSDAVAISWACERLA--CQD-----ATAMSD-EVLRDLIRDRLSRGNSGXXXXXXXXRAQAKTTYADVARAATLLGRRRLATLLLDLEPLAADQVQLLLAMNEDELALRRAVASGDYDLIALVLLQAEDGRRAAALSLDGSXXXXXXXXXXXXRSEGARSALFRAAQAHPEALSILKAYYSSRSGLAERRQLHALCTFCGQFLDAGTLAVQAAYEQ 987          
BLAST of mRNA_L-elsbetiae_contig13061.2420.1 vs. uniprot
Match: A0A433PJK2_9FUNG (Vps16, N-terminal region-domain-containing protein (Fragment) n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PJK2_9FUNG)

HSP 1 Score: 143 bits (361), Expect = 3.470e-36
Identity = 80/176 (45.45%), Postives = 114/176 (64.77%), Query Frame = 1
Query:    7 LVDRLAVRHLHFLAIRVCDHLRLRRDRVVVHWACTKIAKACADGAAGKAGAPTDAELTREVVRKLQPCGQISYADVARAAERAGRRRLATMLLDLEPLASDQVPLLLSMGENELGLKKAILSGEDDLVYLSVMHIEQEAGSSEKGREAFCELMVNHPEALRLLKVYYREKGGYMER 534
            LVDRL +RH H LA+RV D+LR+R DR+++HWAC+KI K+  D          +  + R +V KL     +SYA++A+ A +AG+ +LAT LLD EP A+DQVPLL+SM ++EL L KAI SG+ DLVYL + H++++    E     F  ++ N P A  LL+VY +E+   M R
Sbjct:  471 LVDRLIIRHQHLLAVRVADYLRMRTDRILIHWACSKITKSTED----------EDTICRTIVEKLANKPGLSYAEIAKTAYKAGQPKLATKLLDYEPRAADQVPLLISMEQDELALIKAIESGDTDLVYLVIFHLKRKLQLGE-----FFRIINNKPLACNLLEVYCKEQDKQMLR 631          
BLAST of mRNA_L-elsbetiae_contig13061.2420.1 vs. uniprot
Match: A0A8H4AR35_GIGMA (Probable vacuolar protein sorting-associated protein 16 homolog n=1 Tax=Gigaspora margarita TaxID=4874 RepID=A0A8H4AR35_GIGMA)

HSP 1 Score: 142 bits (358), Expect = 1.310e-35
Identity = 81/203 (39.90%), Postives = 127/203 (62.56%), Query Frame = 1
Query:    7 LVDRLAVRHLHFLAIRVCDHLRLRRDRVVVHWACTKIAKACADGAAGKAGAPTDAELTREVVRKLQPCGQISYADVARAAERAGRRRLATMLLDLEPLASDQVPLLLSMGENELGLKKAILSGEDDLVYLSVMHIEQEAGSSEKGREAFCELMVNHPEALRLLKVYYREKGGYMERRKLHNLCVFSKQYLEAGDLAVRKAYTQ 615
            L+DRL  RH H LA+R+C++L++R DRV++HWAC KI K+  D          +  + R +V KL     +SYA++AR A + G+ +LAT LLD EP A+DQVPLL+SM E+EL L KAI SG+ DLVYL ++H++++    E     F  ++ N P A  LL+VY +++    + + L +      + +E+ ++A+ ++Y Q
Sbjct:  441 LIDRLINRHHHLLALRICEYLKMRTDRVLIHWACAKIKKSTDD----------EETICRMIVEKLANKPGLSYAEIARTAHKVGQPKLATRLLDYEPRAADQVPLLMSMQEDELALIKAIESGDTDLVYLVMLHLKRKLPLGE-----FFRIINNKPMACNLLEVYCKQQ----DLKLLTDFYYQDDRRVESANIAILESYNQ 624          
BLAST of mRNA_L-elsbetiae_contig13061.2420.1 vs. uniprot
Match: A0A2D4C1F8_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C1F8_PYTIN)

HSP 1 Score: 142 bits (358), Expect = 1.370e-35
Identity = 77/170 (45.29%), Postives = 110/170 (64.71%), Query Frame = 1
Query:    1 QVLVDRLAVRHLHFLAIRVCDHLRLRRDRVVVHWACTKIAKACADGAAGKAGAPTDAELTREVVRKLQPCGQISYADVARAAERAGRRRLATMLLDLEPLASDQVPLLLSMGENELGLKKAILSGEDDLVYLSVMHIEQEAGSSEKGREAFCELMVNHPEALRLLKVYYR 510
            +V++ RL     HFLA+++C++L +  DRV+VHWAC K+       AA + G  TD EL   + ++L+    +SYAD+A  AE AGRRRLATM LDLEP A+DQVPLLLSMGE EL L+K++ S   DL+++++ H+E+   S ++ R       V + EA  L+  YYR
Sbjct:  477 EVVIGRLVAMRHHFLALKICEYLSIPTDRVLVHWACEKVR-----AAAKEPGXITDEELVALIRKRLKHATLVSYADIASCAEHAGRRRLATMFLDLEPNATDQVPLLLSMGEFELALRKSLESNNTDLIFMTLFHLERSLPSMDEFRYVLQREPVLYGEATNLMLSYYR 641          
BLAST of mRNA_L-elsbetiae_contig13061.2420.1 vs. uniprot
Match: W4H5Y0_9STRA (Uncharacterized protein n=9 Tax=Aphanomyces TaxID=100860 RepID=W4H5Y0_9STRA)

HSP 1 Score: 140 bits (352), Expect = 8.800e-35
Identity = 78/184 (42.39%), Postives = 113/184 (61.41%), Query Frame = 1
Query:    1 QVLVDRLAVRHLHFLAIRVCDHLRLRRDRVVVHWACTKIAKACADGAAGKAGAPTDAELTREVVRKLQPCGQISYADVARAAERAGRRRLATMLLDLEPLASDQVPLLLSMGENELGLKKAILSGEDDLVYLSVMHIEQEAGSSEKGREAFCELMVNHPEALRLLKVYYREKGGYMERRKLHNL 552
            +V+V RL     HFLA+++CD++++  DRV+VHWAC K+  +      G     TD  +   V +KL+    +SY+++A  AERAGR RLATMLLDLE  ASDQVPLLLSMGE EL L+K++ S   DL+YL++ H+E+     +  R    E    + EA+ LL ++Y     + +  KL N+
Sbjct:  476 EVVVSRLVAMRHHFLALKICDYMKITSDRVLVHWACEKVKSSFESATPGGGPPMTDEAIVSMVRKKLKDATLVSYSEIASCAERAGRHRLATMLLDLEENASDQVPLLLSMGEFELALRKSLESSHTDLIYLTLFHMERTMPPDDVRRVLHSE--PQYAEAIHLLAMFYI--ATHADSSKLDNI 655          
BLAST of mRNA_L-elsbetiae_contig13061.2420.1 vs. uniprot
Match: M4BQT0_HYAAE (Uncharacterized protein n=2 Tax=Peronosporaceae TaxID=4777 RepID=M4BQT0_HYAAE)

HSP 1 Score: 138 bits (347), Expect = 8.910e-35
Identity = 76/170 (44.71%), Postives = 108/170 (63.53%), Query Frame = 1
Query:    1 QVLVDRLAVRHLHFLAIRVCDHLRLRRDRVVVHWACTKIAKACADGAAGKAGAPTDAELTREVVRKLQPCGQISYADVARAAERAGRRRLATMLLDLEPLASDQVPLLLSMGENELGLKKAILSGEDDLVYLSVMHIEQEAGSSEKGREAFCELMVNHPEALRLLKVYYR 510
            +V+V RL     HFLA+++C++L +  DRV+VHWAC K+  A +          +D EL   V +KL+    +SYAD+A  AER  RRRLATM LDLE  ASDQVPLLLSMGE EL L+K++ S   DL+Y+++ H+E+   S ++ R       + + EA+ L+ +YYR
Sbjct:  124 EVVVSRLVAMRHHFLALKICEYLNITTDRVLVHWACEKVKAATSSNV-------SDEELVALVRKKLKKATLVSYADIANCAERVNRRRLATMFLDLEENASDQVPLLLSMGEFELALRKSLESNNTDLIYMTLFHLERTLPSMDEFRYVLNREPI-YAEAVNLMLLYYR 285          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13061.2420.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FS70_ECTSI2.210e-12189.27Vacuolar protein sorting vps16 n=1 Tax=Ectocarpus ... [more]
A0A6H5KVY1_9PHAE4.330e-11889.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
F0WQI0_9STRA6.250e-3746.55Vacuolar protein sortingassociated protein putativ... [more]
A0A484EFV2_BRELC1.560e-3647.37Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A836CCV0_9STRA3.160e-3642.41Vps16, N-terminal region-domain-containing protein... [more]
A0A433PJK2_9FUNG3.470e-3645.45Vps16, N-terminal region-domain-containing protein... [more]
A0A8H4AR35_GIGMA1.310e-3539.90Probable vacuolar protein sorting-associated prote... [more]
A0A2D4C1F8_PYTIN1.370e-3545.29Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
W4H5Y0_9STRA8.800e-3542.39Uncharacterized protein n=9 Tax=Aphanomyces TaxID=... [more]
M4BQT0_HYAAE8.910e-3544.71Uncharacterized protein n=2 Tax=Peronosporaceae Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13061contigL-elsbetiae_contig13061:540..4241 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score366.3
Seed ortholog evalue9.3e-99
Seed eggNOG ortholog2880.D7FS70
KEGG koko:K20180
KEGG Pathwayko04138,map04138
Hectar predicted targeting categoryother localisation
GOsGO:0000323,GO:0003674,GO:0003779,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005765,GO:0005768,GO:0005773,GO:0005774,GO:0006810,GO:0006886,GO:0007275,GO:0008092,GO:0008104,GO:0008150,GO:0009790,GO:0009792,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016192,GO:0016197,GO:0030897,GO:0031090,GO:0031338,GO:0031410,GO:0031982,GO:0032501,GO:0032502,GO:0032879,GO:0032889,GO:0032991,GO:0033036,GO:0033043,GO:0034613,GO:0035295,GO:0035542,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043254,GO:0044087,GO:0044088,GO:0044422,GO:0044424,GO:0044425,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046907,GO:0048565,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0051049,GO:0051128,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055123,GO:0060627,GO:0065007,GO:0070727,GO:0071702,GO:0071705,GO:0097708,GO:0098588,GO:0098796,GO:0098805,GO:0098852,GO:0099023
EggNOG free text desc.regulation of vacuole fusion, non-autophagic
EggNOG OGsKOG2280@1,KOG2280@2759
Ec32 ortholog descriptionvacuolar protein sorting vps16
Ec32 orthologEc-01_000780.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131
Exons4
Model size615
Cds size615
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13061.2420.1prot_L-elsbetiae_contig13061.2420.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig13061 540..4241 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815488.5903223-CDS-L-elsbetiae_contig13061:539..6561622815488.5903223-CDS-L-elsbetiae_contig13061:539..656Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13061 540..656 -
1691682922.6414297-CDS-L-elsbetiae_contig13061:539..6561691682922.6414297-CDS-L-elsbetiae_contig13061:539..656Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13061 540..656 -
1622815488.6005077-CDS-L-elsbetiae_contig13061:2068..22541622815488.6005077-CDS-L-elsbetiae_contig13061:2068..2254Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13061 2069..2254 -
1691682922.659793-CDS-L-elsbetiae_contig13061:2068..22541691682922.659793-CDS-L-elsbetiae_contig13061:2068..2254Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13061 2069..2254 -
1622815488.60982-CDS-L-elsbetiae_contig13061:3633..37621622815488.60982-CDS-L-elsbetiae_contig13061:3633..3762Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13061 3634..3762 -
1691682922.6687539-CDS-L-elsbetiae_contig13061:3633..37621691682922.6687539-CDS-L-elsbetiae_contig13061:3633..3762Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13061 3634..3762 -
1622815488.6190014-CDS-L-elsbetiae_contig13061:4058..42411622815488.6190014-CDS-L-elsbetiae_contig13061:4058..4241Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13061 4059..4241 -
1691682922.6771207-CDS-L-elsbetiae_contig13061:4058..42411691682922.6771207-CDS-L-elsbetiae_contig13061:4058..4241Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13061 4059..4241 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig13061.2420.1

>prot_L-elsbetiae_contig13061.2420.1 ID=prot_L-elsbetiae_contig13061.2420.1|Name=mRNA_L-elsbetiae_contig13061.2420.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=205bp
QVLVDRLAVRHLHFLAIRVCDHLRLRRDRVVVHWACTKIAKACADGAAGK
AGAPTDAELTREVVRKLQPCGQISYADVARAAERAGRRRLATMLLDLEPL
ASDQVPLLLSMGENELGLKKAILSGEDDLVYLSVMHIEQEAGSSEKGREA
FCELMVNHPEALRLLKVYYREKGGYMERRKLHNLCVFSKQYLEAGDLAVR
KAYTQ
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mRNA from alignment at L-elsbetiae_contig13061:540..4241-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig13061.2420.1 ID=mRNA_L-elsbetiae_contig13061.2420.1|Name=mRNA_L-elsbetiae_contig13061.2420.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3702bp|location=Sequence derived from alignment at L-elsbetiae_contig13061:540..4241- (Laminarionema elsbetiae ELsaHSoW15)
CAGGTCTTGGTGGACAGGCTAGCGGTGCGGCACCTCCACTTTCTGGCGAT CCGGGTGTGCGACCACCTCCGCTTGAGGCGAGATCGCGTGGTCGTGCACT GGGCCTGCACGAAGATCGCCAAGGCTTGCGCGGACGGCGCAGCCGGCAAG GCTGGCGCGCCCACGGACGCGGAGCTGACGAGGGTAAGAGGCGTGTGCGT GTGTGTGTGTGTTGTGTGTATTAGCAGCCTGTAGTGTGTACGTAGTTGTA GTGTGTGGGGACAACGGGGGAGATTATGTCTTTGGAGAAAATGCTCTCTG TTCGTAGTATGTACAGCTCTTCGGACTGCTACTGCTGCTGCTGCTGCTGC TGCTGCTGTGTTGCGCGTGCGCTCCTTGTAGTCAGGAGTAGGTGGTGGTG AGGATGCGGCGGCAAGCCCGGACGATCAACCCATCGTGTTAAACTCACGC GTGGCTGGAATCTTGCTTGTCTTCCGCAGGAGGTGGTGAGGAAGCTGCAG CCTTGCGGGCAGATCTCGTACGCCGATGTGGCTCGGGCGGCTGAGCGTGC GGGACGGCGGCGGCTGGCGACGATGCTCTTGGACCTCGAGCCACTGGCCT CGGACCAGGTGAGGTCACAAATAAGATGAACGCCCAGTCGACATCAAGGC AGACAAAACAGAGCATCGCCAGATTTATCCATATACTTCGTATACAGCTG TAAGCATGTATTGATTATTATGTACGTTGAAACAATAGTGTGCTTGGAGG TTAATAATGTCTTCCGCACAGAGTTTTCGGTTGAGTACGAGCTGACGAAC GAGATACACGGCAGTACCCGACTGAAAAAGAAGGGCCGAAGGCTTTAGGA ACGCTGTTCCGCCGGAGTTATTGAGGTCTTCACACGTAAATCCTGCCTTC TGTTTTTTTGAGTGGCAGCGAGACGCAAGACTCCTCCGGGAGTCAGTTTA GTGTCGCCTGGCGCGTATGTGTCATAGTTTTGGTTCACTTTTCTTCAGCG GCGTCGAGGGTGCCCCCTTTAGTGTTTTTGTGACCACGCGCCGGCCCCCG TAAACATGTTTTTGGACTATTTGGAGAGCTGATGTGAGAAACAACATATT TATGCATATACATACCTCGAATTGTCTACAAATCACCTCCTCTCCGGGCC GATTTTCAACGCTCGCTTGCTTTTTTTTCAACACAAGCTGGGGTGCTAAA CTGCCGAACCGGTGTCATTGACATACAACTATCTGGTTGAGGTACCATAC GGTACCCCCCTCGCTATTGTGGAGCAACCACGGAACCCCCTTTTAAAACC GTGTTTCTACGTGTGATACCTGTGATCTCTTGTACCACAATCATGAACAC ATTACTCGCGGTTTTTCTCCAGAGGGAGCTCCAGGCCCACTCGAGACAGC CCCGCGGTGCGTAAGCGAAGAGGGGCCCGGTCTGGCCACCGATTGCCCGG GACCCGCGGAGCCCCTTCTTGGTCGTCCCTCTCAAACTAATTAGCTTTAA TCGCCTTTTTAGAATTAATATTCTGAGTGTTACCCCGGTAAAATTACGGT GGTCAGTTCTTGCGTGTGGTGACGGAGTGTTGTAGCGTTTCCGCTCTGCG TTCCCCCTTCCTTCCTTCCCGCGTGCATTGCATCTGCATTACCATACATT GCATTGTGTGTGTGTGTATTCTTCCCATTTATTTTGGCGACAGTCCCCCG AAGTGGAGACGTGTACTACACCTTGCGGTGTACTTACAGGTACTACACTT TGCAGTGCATTTGTCTGTACAACTAGAAACCAACCGGGGTCACACAGGAG GAGGTGAACACTGGGGCTTTTTCTTCTTTTTTTTTTCTTCTTTTTTTGCA TTGCACATGCATTAATTACACTGCATGGCAGATGCATTGCATTGCATGGC ATATGCATATGCTTTGATTTTTTTTTTTTTTTTTTTGCTTATTGTCAGGT GTAAACATGCTTTTCTTGTTTTGTTTTTTTTTGTCAGGTGCCCCTGTTGC TCTCGATGGGGGAGAACGAGCTGGGGCTGAAGAAGGCCATCCTGTCCGGG GAGGATGACCTCGTATACTTATCGGTCATGCACATCGAGCAGGAGGCCGG CTCCTCCGAGAAAGGCAGAGAGGCGTTTTGCGAGCTCATGGTCAACCACC CGGAGGCTCTCCGCTTGCTCAAGGTACCTACCTACCTACCTATATGGCAG ATTTTATTTTCTTCTTCTTCTAACCATTTATTTCCAGTGCTCGATGGGCT CCTTGTCACGAGGACGTTTTGCCAGAGTACTGAACCGTGGTCACACGGAA AGGGTACATGGGATTGATTGATGGAAAAAAAGACAAACTAAAAGAAGGAG AACTTTGGTGTACCCGGCAAGTCACAAAATAAAGGACCTTTGAGTGTGAC GTGCGAGGAGGAGGTTTGCGTGTGAGGTGTGATGTGCGCACCGTTTGTCA CTGCTGCTGTTGGTGGGTATTTTCCGGCTGCCACTTACTTGCATAGCCCC CCCCTGCGTGCTTGCGCGTGAGGTGGTGGGACCCCTTTTTCAGATCTCGG CTTTTTGGGCGCGTCTTTTGAGAAGGAAACGTACACAGGTACCCCTGTTT GTTGGTTTGTACTTCGCGGCACCCCGCCCCCTCACGGCCATATTAAAATA TGAAACCGGCGAACCCGAAAGTCACCTGCGAGGTGGTGGTGGCGGTGTAG TGCGGTCGGGTGTTGTTTTCGCGATGTGTTGTCGATGCGATGTTGTTGAT GTCGTGCGTCAAGCGAATCAGGCTCTTCTCTGTGCGGTACCGGGAGGCGC GAAAGGAAGGCTGGTCGGTACAAACGGCTAGCTAGCCCACGGAGGGGCGA AAAGACGCCGCGAAACCTCAGCCTGACGGCGTTAATCGGCCGATGCAATC GTAATCGTTCATTCATGCGTGACAACAAAACATTAACTGAAGTTTGATTT CTGAAGTTTGATTTATGAAGTTTGTCAAGGGGCCAACTAATCGATTTCGT CATCAGCACTACGCATCATGTATGCACCGGACTGAACCGTTCCTTCGTGG CTGGTAGGAGCCGCAGCAGGCAGCACTGCTGTCAGCGGCGCCTACGCGCT GTACCGGCGGTGCGCACTACTTATCATTTAGCACAGCAGCAACCAAAAGA CGTTCGTGTTTACTAACAAAGGTTCTGCAACACGTCAGACCTCTTGAGCG TCCAACCCGCGAAAAATTAGTTCTAGGGAGGCTGTCGCAAACGCACCTAC AGTAGGTAACTAGCTAACGCTTAACCCTCTCGCCGCCCCTGACTTGCTGT TGTCTTCACATTAAAAACCGTTCCGATCTCTCTATCCGGTACACCTCCAT GAGTCCGTACTATTCCAAAACTGACGCGATGGATTCCCGTGGCCGCAGGG TAACTTACCCTCAAAGGGGGATTTATGCTGAGAAAATAAAAAGAAATAAA ATGGCTACATACAGCATTACGTAGCACAAAATCATAACTGTATTTTACTT TTCGTGTGGCTTTTTTTATCGGTGACCGACGGGGGTGTGGTCTTGATGAT TCGCTTTCGTTATTTTTTGTCGTCTGTCGAGCAAGGTCTACTACCGCGAG AAGGGCGGATACATGGAGCGCAGAAAGCTGCACAACCTCTGCGTTTTCAG CAAGCAGTACCTCGAGGCTGGCGACCTGGCCGTAAGAAAGGCTTACACGC AG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig13061:540..4241-

>mRNA_L-elsbetiae_contig13061.2420.1 ID=mRNA_L-elsbetiae_contig13061.2420.1|Name=mRNA_L-elsbetiae_contig13061.2420.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1230bp|location=Sequence derived from alignment at L-elsbetiae_contig13061:540..4241- (Laminarionema elsbetiae ELsaHSoW15)
CAGGTCTTGGTGGACAGGCTAGCGGTGCGGCACCTCCACTTTCTGGCGAT
CCGGGTGTGCGACCACCTCCGCTTGAGGCGAGATCGCGTGGTCGTGCACT
GGGCCTGCACGAAGATCGCCAAGGCTTGCGCGGACGGCGCAGCCGGCAAG
GCTGGCGCGCCCACGGACGCGGAGCTGACGAGGCAGGTCTTGGTGGACAG
GCTAGCGGTGCGGCACCTCCACTTTCTGGCGATCCGGGTGTGCGACCACC
TCCGCTTGAGGCGAGATCGCGTGGTCGTGCACTGGGCCTGCACGAAGATC
GCCAAGGCTTGCGCGGACGGCGCAGCCGGCAAGGCTGGCGCGCCCACGGA
CGCGGAGCTGACGAGGGAGGTGGTGAGGAAGCTGCAGCCTTGCGGGCAGA
TCTCGTACGCCGATGTGGCTCGGGCGGCTGAGCGTGCGGGACGGCGGCGG
CTGGCGACGATGCTCTTGGACCTCGAGCCACTGGCCTCGGACCAGGAGGT
GGTGAGGAAGCTGCAGCCTTGCGGGCAGATCTCGTACGCCGATGTGGCTC
GGGCGGCTGAGCGTGCGGGACGGCGGCGGCTGGCGACGATGCTCTTGGAC
CTCGAGCCACTGGCCTCGGACCAGGTGCCCCTGTTGCTCTCGATGGGGGA
GAACGAGCTGGGGCTGAAGAAGGCCATCCTGTCCGGGGAGGATGACCTCG
TATACTTATCGGTCATGCACATCGAGCAGGAGGCCGGCTCCTCCGAGAAA
GGCAGAGAGGCGTTTTGCGAGCTCATGGTCAACCACCCGGAGGCTCTCCG
CTTGCTCAAGGTGCCCCTGTTGCTCTCGATGGGGGAGAACGAGCTGGGGC
TGAAGAAGGCCATCCTGTCCGGGGAGGATGACCTCGTATACTTATCGGTC
ATGCACATCGAGCAGGAGGCCGGCTCCTCCGAGAAAGGCAGAGAGGCGTT
TTGCGAGCTCATGGTCAACCACCCGGAGGCTCTCCGCTTGCTCAAGGTCT
ACTACCGCGAGAAGGGCGGATACATGGAGCGCAGAAAGCTGCACAACCTC
TGCGTTTTCAGCAAGCAGTACCTCGAGGCTGGCGACCTGGCCGTAAGAAA
GGCTTACACGCAGGTCTACTACCGCGAGAAGGGCGGATACATGGAGCGCA
GAAAGCTGCACAACCTCTGCGTTTTCAGCAAGCAGTACCTCGAGGCTGGC
GACCTGGCCGTAAGAAAGGCTTACACGCAG
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