mRNA_L-elsbetiae_contig13061.2420.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig13061.2420.1 vs. uniprot
Match: D7FS70_ECTSI (Vacuolar protein sorting vps16 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS70_ECTSI) HSP 1 Score: 365 bits (936), Expect = 2.210e-121 Identity = 183/205 (89.27%), Postives = 194/205 (94.63%), Query Frame = 1 Query: 1 QVLVDRLAVRHLHFLAIRVCDHLRLRRDRVVVHWACTKIAKACADGAAGKAGAPTDAELTREVVRKLQPCGQISYADVARAAERAGRRRLATMLLDLEPLASDQVPLLLSMGENELGLKKAILSGEDDLVYLSVMHIEQEAGSSEKGREAFCELMVNHPEALRLLKVYYREKGGYMERRKLHNLCVFSKQYLEAGDLAVRKAYTQ 615 +VLVDRLA+RHLH LA+RVCDHLRLRRDRV VHWAC KIAKAC + +AG+ GAPTD +LTREVV KL+PCGQISYADVARAAER+GRRRLATMLLDLEPLASDQVPLLLSMGENELGLKKAILSGEDDLVYLSVMHIEQEAGSSEKGREAFCELM HPEALRLLKVYYREKGGYMER+KLHNLCVFSKQYLEAG LA+RKAYTQ Sbjct: 164 EVLVDRLAMRHLHLLAVRVCDHLRLRRDRVAVHWACKKIAKACNEASAGEPGAPTDDDLTREVVEKLRPCGQISYADVARAAERSGRRRLATMLLDLEPLASDQVPLLLSMGENELGLKKAILSGEDDLVYLSVMHIEQEAGSSEKGREAFCELMHAHPEALRLLKVYYREKGGYMERKKLHNLCVFSKQYLEAGTLAIRKAYTQ 368
BLAST of mRNA_L-elsbetiae_contig13061.2420.1 vs. uniprot
Match: A0A6H5KVY1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVY1_9PHAE) HSP 1 Score: 364 bits (934), Expect = 4.330e-118 Identity = 183/205 (89.27%), Postives = 193/205 (94.15%), Query Frame = 1 Query: 1 QVLVDRLAVRHLHFLAIRVCDHLRLRRDRVVVHWACTKIAKACADGAAGKAGAPTDAELTREVVRKLQPCGQISYADVARAAERAGRRRLATMLLDLEPLASDQVPLLLSMGENELGLKKAILSGEDDLVYLSVMHIEQEAGSSEKGREAFCELMVNHPEALRLLKVYYREKGGYMERRKLHNLCVFSKQYLEAGDLAVRKAYTQ 615 +VLVDRLA+RHLH LA+RVCDHLRLRRDRV VHWAC KI KAC + +AG+ GAPTD +LTREVV KL+PCGQISYADVARAAER+GRRRLATMLLDLEPLASDQVPLLLSMGENELGLKKAILSGEDDLVYLSVMHIEQEAGSSEKGREAFCELM HPEALRLLKVYYREKGGYMER+KLHNLCVFSKQYLEAG LAVRKAYTQ Sbjct: 429 EVLVDRLAMRHLHLLAVRVCDHLRLRRDRVAVHWACKKITKACNEASAGEPGAPTDEDLTREVVEKLRPCGQISYADVARAAERSGRRRLATMLLDLEPLASDQVPLLLSMGENELGLKKAILSGEDDLVYLSVMHIEQEAGSSEKGREAFCELMHAHPEALRLLKVYYREKGGYMERKKLHNLCVFSKQYLEAGTLAVRKAYTQ 633
BLAST of mRNA_L-elsbetiae_contig13061.2420.1 vs. uniprot
Match: F0WQI0_9STRA (Vacuolar protein sortingassociated protein putative n=2 Tax=Albugo TaxID=65356 RepID=F0WQI0_9STRA) HSP 1 Score: 146 bits (368), Expect = 6.250e-37 Identity = 81/174 (46.55%), Postives = 113/174 (64.94%), Query Frame = 1 Query: 1 QVLVDRLAVRHLHFLAIRVCDHLRLRRDRVVVHWACTKIAKACA----DGAAGKAGAPTDAELTREVVRKLQPCGQISYADVARAAERAGRRRLATMLLDLEPLASDQVPLLLSMGENELGLKKAILSGEDDLVYLSVMHIEQEAGSSEKGREAFCELMVNHPEALRLLKVYYR 510 +V + RL HFLA+++C +L++ DRV+VHWAC K+ A GA+ ++ A +D EL V RKL+ +SYAD+A AER RRRLATM LDLE ASDQVPLLLSMGE EL ++K+I S DLV++++ H+E+ S E+ R V + EA++LL +YY+ Sbjct: 483 EVAISRLVAFRQHFLALKICSYLKVSTDRVLVHWACEKVKSVAAAQEASGASSESQAQSDDELVSLVCRKLKTATSVSYADIASCAERVNRRRLATMFLDLEQNASDQVPLLLSMGEFELAIRKSIESNVTDLVFMTLFHLERTLPSLEELRYVLYRDPVMYKEAIQLLCLYYQ 656
BLAST of mRNA_L-elsbetiae_contig13061.2420.1 vs. uniprot
Match: A0A484EFV2_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EFV2_BRELC) HSP 1 Score: 145 bits (365), Expect = 1.560e-36 Identity = 81/171 (47.37%), Postives = 112/171 (65.50%), Query Frame = 1 Query: 1 QVLVDRLAVRHLHFLAIRVCDHLRLRRDRVVVHWACTKIAKACADGAAGKAGAPTDAELTREVVRKLQPCGQISYADVARAAERAGRRRLATMLLDLEPLASDQVPLLLSMGENELGLKKAILSGEDDLVYLSVMHIEQEAGSSEKGREAFCELMVNHPEALRLLKVYYRE 513 +V+V RL H HFLA+++C++L++ DRV+VHWAC K+ A + A D EL V +KL+ +SYAD+A AERA RRRLATM LDLE ASDQVPLLLSMGE EL L+K++ S DLVY+++ H+E+ S ++ R + + EA+ L+ +YYRE Sbjct: 476 EVVVSRLVAMHHHFLALKICEYLKIPTDRVLVHWACEKVKAATSSDVA-------DEELVALVRKKLKKATLVSYADIANCAERANRRRLATMFLDLEENASDQVPLLLSMGEFELALRKSLESNNTDLVYMTLFHLERTLPSMDEFRYVLNREPM-YAEAVNLMLLYYRE 638
BLAST of mRNA_L-elsbetiae_contig13061.2420.1 vs. uniprot
Match: A0A836CCV0_9STRA (Vps16, N-terminal region-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCV0_9STRA) HSP 1 Score: 144 bits (363), Expect = 3.160e-36 Identity = 95/224 (42.41%), Postives = 123/224 (54.91%), Query Frame = 1 Query: 52 RVCDHLRLRRDRVVVHWACTKIAKACADGAAGKAGAPTDAELTREVVRKLQPCG---------------QISYADVARAAERAGRRRLATMLLDLEPLASDQVPLLLSMGENELGLKKAILSGEDDLVYLSVMHIEQEA--------GS-------------SEKGREAFCELMVNHPEALRLLKVYYREKGGYMERRKLHNLCVFSKQYLEAGDLAVRKAYTQ 615 R C HL+L D V + WAC ++A C D A A +D E+ R+++R G + +YADVARAA GRRRLAT+LLDLEPLA+DQV LLL+M E+EL L++A+ SG+ DL+ L ++ E GS SE R A HPEAL +LK YY + G ERR+LH LC F Q+L+AG LAV+ AY Q Sbjct: 772 RACQHLKLPSDAVAISWACERLA--CQD-----ATAMSD-EVLRDLIRDRLSRGNSGXXXXXXXXRAQAKTTYADVARAATLLGRRRLATLLLDLEPLAADQVQLLLAMNEDELALRRAVASGDYDLIALVLLQAEDGRRAAALSLDGSXXXXXXXXXXXXRSEGARSALFRAAQAHPEALSILKAYYSSRSGLAERRQLHALCTFCGQFLDAGTLAVQAAYEQ 987
BLAST of mRNA_L-elsbetiae_contig13061.2420.1 vs. uniprot
Match: A0A433PJK2_9FUNG (Vps16, N-terminal region-domain-containing protein (Fragment) n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PJK2_9FUNG) HSP 1 Score: 143 bits (361), Expect = 3.470e-36 Identity = 80/176 (45.45%), Postives = 114/176 (64.77%), Query Frame = 1 Query: 7 LVDRLAVRHLHFLAIRVCDHLRLRRDRVVVHWACTKIAKACADGAAGKAGAPTDAELTREVVRKLQPCGQISYADVARAAERAGRRRLATMLLDLEPLASDQVPLLLSMGENELGLKKAILSGEDDLVYLSVMHIEQEAGSSEKGREAFCELMVNHPEALRLLKVYYREKGGYMER 534 LVDRL +RH H LA+RV D+LR+R DR+++HWAC+KI K+ D + + R +V KL +SYA++A+ A +AG+ +LAT LLD EP A+DQVPLL+SM ++EL L KAI SG+ DLVYL + H++++ E F ++ N P A LL+VY +E+ M R Sbjct: 471 LVDRLIIRHQHLLAVRVADYLRMRTDRILIHWACSKITKSTED----------EDTICRTIVEKLANKPGLSYAEIAKTAYKAGQPKLATKLLDYEPRAADQVPLLISMEQDELALIKAIESGDTDLVYLVIFHLKRKLQLGE-----FFRIINNKPLACNLLEVYCKEQDKQMLR 631
BLAST of mRNA_L-elsbetiae_contig13061.2420.1 vs. uniprot
Match: A0A8H4AR35_GIGMA (Probable vacuolar protein sorting-associated protein 16 homolog n=1 Tax=Gigaspora margarita TaxID=4874 RepID=A0A8H4AR35_GIGMA) HSP 1 Score: 142 bits (358), Expect = 1.310e-35 Identity = 81/203 (39.90%), Postives = 127/203 (62.56%), Query Frame = 1 Query: 7 LVDRLAVRHLHFLAIRVCDHLRLRRDRVVVHWACTKIAKACADGAAGKAGAPTDAELTREVVRKLQPCGQISYADVARAAERAGRRRLATMLLDLEPLASDQVPLLLSMGENELGLKKAILSGEDDLVYLSVMHIEQEAGSSEKGREAFCELMVNHPEALRLLKVYYREKGGYMERRKLHNLCVFSKQYLEAGDLAVRKAYTQ 615 L+DRL RH H LA+R+C++L++R DRV++HWAC KI K+ D + + R +V KL +SYA++AR A + G+ +LAT LLD EP A+DQVPLL+SM E+EL L KAI SG+ DLVYL ++H++++ E F ++ N P A LL+VY +++ + + L + + +E+ ++A+ ++Y Q Sbjct: 441 LIDRLINRHHHLLALRICEYLKMRTDRVLIHWACAKIKKSTDD----------EETICRMIVEKLANKPGLSYAEIARTAHKVGQPKLATRLLDYEPRAADQVPLLMSMQEDELALIKAIESGDTDLVYLVMLHLKRKLPLGE-----FFRIINNKPMACNLLEVYCKQQ----DLKLLTDFYYQDDRRVESANIAILESYNQ 624
BLAST of mRNA_L-elsbetiae_contig13061.2420.1 vs. uniprot
Match: A0A2D4C1F8_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C1F8_PYTIN) HSP 1 Score: 142 bits (358), Expect = 1.370e-35 Identity = 77/170 (45.29%), Postives = 110/170 (64.71%), Query Frame = 1 Query: 1 QVLVDRLAVRHLHFLAIRVCDHLRLRRDRVVVHWACTKIAKACADGAAGKAGAPTDAELTREVVRKLQPCGQISYADVARAAERAGRRRLATMLLDLEPLASDQVPLLLSMGENELGLKKAILSGEDDLVYLSVMHIEQEAGSSEKGREAFCELMVNHPEALRLLKVYYR 510 +V++ RL HFLA+++C++L + DRV+VHWAC K+ AA + G TD EL + ++L+ +SYAD+A AE AGRRRLATM LDLEP A+DQVPLLLSMGE EL L+K++ S DL+++++ H+E+ S ++ R V + EA L+ YYR Sbjct: 477 EVVIGRLVAMRHHFLALKICEYLSIPTDRVLVHWACEKVR-----AAAKEPGXITDEELVALIRKRLKHATLVSYADIASCAEHAGRRRLATMFLDLEPNATDQVPLLLSMGEFELALRKSLESNNTDLIFMTLFHLERSLPSMDEFRYVLQREPVLYGEATNLMLSYYR 641
BLAST of mRNA_L-elsbetiae_contig13061.2420.1 vs. uniprot
Match: W4H5Y0_9STRA (Uncharacterized protein n=9 Tax=Aphanomyces TaxID=100860 RepID=W4H5Y0_9STRA) HSP 1 Score: 140 bits (352), Expect = 8.800e-35 Identity = 78/184 (42.39%), Postives = 113/184 (61.41%), Query Frame = 1 Query: 1 QVLVDRLAVRHLHFLAIRVCDHLRLRRDRVVVHWACTKIAKACADGAAGKAGAPTDAELTREVVRKLQPCGQISYADVARAAERAGRRRLATMLLDLEPLASDQVPLLLSMGENELGLKKAILSGEDDLVYLSVMHIEQEAGSSEKGREAFCELMVNHPEALRLLKVYYREKGGYMERRKLHNL 552 +V+V RL HFLA+++CD++++ DRV+VHWAC K+ + G TD + V +KL+ +SY+++A AERAGR RLATMLLDLE ASDQVPLLLSMGE EL L+K++ S DL+YL++ H+E+ + R E + EA+ LL ++Y + + KL N+ Sbjct: 476 EVVVSRLVAMRHHFLALKICDYMKITSDRVLVHWACEKVKSSFESATPGGGPPMTDEAIVSMVRKKLKDATLVSYSEIASCAERAGRHRLATMLLDLEENASDQVPLLLSMGEFELALRKSLESSHTDLIYLTLFHMERTMPPDDVRRVLHSE--PQYAEAIHLLAMFYI--ATHADSSKLDNI 655
BLAST of mRNA_L-elsbetiae_contig13061.2420.1 vs. uniprot
Match: M4BQT0_HYAAE (Uncharacterized protein n=2 Tax=Peronosporaceae TaxID=4777 RepID=M4BQT0_HYAAE) HSP 1 Score: 138 bits (347), Expect = 8.910e-35 Identity = 76/170 (44.71%), Postives = 108/170 (63.53%), Query Frame = 1 Query: 1 QVLVDRLAVRHLHFLAIRVCDHLRLRRDRVVVHWACTKIAKACADGAAGKAGAPTDAELTREVVRKLQPCGQISYADVARAAERAGRRRLATMLLDLEPLASDQVPLLLSMGENELGLKKAILSGEDDLVYLSVMHIEQEAGSSEKGREAFCELMVNHPEALRLLKVYYR 510 +V+V RL HFLA+++C++L + DRV+VHWAC K+ A + +D EL V +KL+ +SYAD+A AER RRRLATM LDLE ASDQVPLLLSMGE EL L+K++ S DL+Y+++ H+E+ S ++ R + + EA+ L+ +YYR Sbjct: 124 EVVVSRLVAMRHHFLALKICEYLNITTDRVLVHWACEKVKAATSSNV-------SDEELVALVRKKLKKATLVSYADIANCAERVNRRRLATMFLDLEENASDQVPLLLSMGEFELALRKSLESNNTDLIYMTLFHLERTLPSMDEFRYVLNREPI-YAEAVNLMLLYYR 285 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13061.2420.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig13061.2420.1 >prot_L-elsbetiae_contig13061.2420.1 ID=prot_L-elsbetiae_contig13061.2420.1|Name=mRNA_L-elsbetiae_contig13061.2420.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=205bp QVLVDRLAVRHLHFLAIRVCDHLRLRRDRVVVHWACTKIAKACADGAAGKback to top mRNA from alignment at L-elsbetiae_contig13061:540..4241- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig13061.2420.1 ID=mRNA_L-elsbetiae_contig13061.2420.1|Name=mRNA_L-elsbetiae_contig13061.2420.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3702bp|location=Sequence derived from alignment at L-elsbetiae_contig13061:540..4241- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig13061:540..4241- >mRNA_L-elsbetiae_contig13061.2420.1 ID=mRNA_L-elsbetiae_contig13061.2420.1|Name=mRNA_L-elsbetiae_contig13061.2420.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1230bp|location=Sequence derived from alignment at L-elsbetiae_contig13061:540..4241- (Laminarionema elsbetiae ELsaHSoW15)back to top |