prot_L-elsbetiae_contig13056.2418.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig13056.2418.1
Unique Nameprot_L-elsbetiae_contig13056.2418.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length202
Homology
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BLAST of mRNA_L-elsbetiae_contig13056.2418.1 vs. uniprot
Match: A0A6H5KMV8_9PHAE (Asp_Arg_Hydrox domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KMV8_9PHAE)

HSP 1 Score: 168 bits (425), Expect = 2.380e-47
Identity = 92/156 (58.97%), Postives = 115/156 (73.72%), Query Frame = 0 
Query:    7 RACMAMVILAGFSDRTSAFLVHPPPSTSKSSTYCCSTLIDNRVRGVKQQHHQKQRQVVRQLDWRDRTERNLRHVLFLQTEDRDRAFELLEDYIERESGSGEEREDFDRIRGLVPHMRKRLWKAPSKEQEDATEELGMDDFQFATKEYIPNLTSQPW 162
            +A + + +L   SD +SAF+   P + + SS  C ST   +    ++Q    +Q  V+  LDWR R  R+ +HV+FL+  DRD+AFELLE YIERES +GE RED+DRIRGLVPHMRKRLWKA S+EQEDATE+LGMDDFQFATKEYIPNLTS+PW
Sbjct:    7 QAAVPVAVLLCSSDWSSAFIAQAPAAAASSSG-CSSTSTCSGA--IRQPQQGRQATVLHHLDWRHRPGRSAQHVVFLERADRDKAFELLETYIERESDAGE-REDYDRIRGLVPHMRKRLWKASSREQEDATEQLGMDDFQFATKEYIPNLTSRPW 158
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13056.2418.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KMV8_9PHAE2.380e-4758.97Asp_Arg_Hydrox domain-containing protein n=2 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..201
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13056contigL-elsbetiae_contig13056:1650..3801 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13056.2418.1mRNA_L-elsbetiae_contig13056.2418.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig13056 1602..5089 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig13056.2418.1 ID=prot_L-elsbetiae_contig13056.2418.1|Name=mRNA_L-elsbetiae_contig13056.2418.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=202bp
MVIDIGRACMAMVILAGFSDRTSAFLVHPPPSTSKSSTYCCSTLIDNRVR
GVKQQHHQKQRQVVRQLDWRDRTERNLRHVLFLQTEDRDRAFELLEDYIE
RESGSGEEREDFDRIRGLVPHMRKRLWKAPSKEQEDATEELGMDDFQFAT
KEYIPNLTSQPWCVLLQPTDFDFDFKPRPNSPRVSTPMVEMLQFLCGVRP
P*
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