prot_L-elsbetiae_contig13053.2416.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig13053.2416.1
Unique Nameprot_L-elsbetiae_contig13053.2416.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length256
Homology
BLAST of mRNA_L-elsbetiae_contig13053.2416.1 vs. uniprot
Match: A0A6H5JPH3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH3_9PHAE)

HSP 1 Score: 118 bits (296), Expect = 2.400e-27
Identity = 116/254 (45.67%), Postives = 138/254 (54.33%), Query Frame = 0
Query:   24 PLLRERGNREGSA-----DTAADGATFDAASFCAVPREQAEADAHPLALPRVKQRARRXXXXXXXXXXXXXXXASTASRSFS--------APAVSGAGIVDADLFGAAFGGSGSNTAGLRADS---RTDGDDPLSQLWLPPPAVVAPGPH---GGGGGDGGLADSGTASLPKVQASEPLFDDDERDVKVAAAGLSDDPLSIMMQERAVARNISRHGGALHDD--VDD--IAPGSPASADAMSVL---GGGRSSL 251
            PL   RG   G +      TAA  A   AA+F  +PREQA AD HPLA+PRVKQR RR  XXXXXXXXXXXXX                  P  + A I     F    G S +   G    S    +   DPL +LW+ PP      P    G G G+GG+A S TA  P+ Q +         DVKVA AGLSDDPLS+MMQERA+ARN+SRHGG++ D+  +DD  + PGSP SA   SV+   GGG SSL
Sbjct:   16 PLAACRGGNNGDSCGPPGTTAAYAAGAGAAAFRPLPREQALADKHPLAVPRVKQRPRRTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPTAAAATIAGNGKFATVLGDSKAGNIGGTDSSGXXXSKNKDPLLELWMTPPXXXXSAPESIPGEGEGEGGVAGSTTAHAPETQLA---------DVKVAVAGLSDDPLSMMMQERAMARNMSRHGGSVPDNDMLDDAIMTPGSPGSAGTASVVLGNGGGGSSL 260          
BLAST of mRNA_L-elsbetiae_contig13053.2416.1 vs. uniprot
Match: D8LLV5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLV5_ECTSI)

HSP 1 Score: 103 bits (256), Expect = 2.940e-21
Identity = 113/251 (45.02%), Postives = 129/251 (51.39%), Query Frame = 0
Query:   19 AIRWTPLLRER-GNREGSADT-AADGATFDAASFCAVPREQAEADAHPLALPRVKQRARRXXXXXXXXXXXXXXXASTASRSFSAPAVSGAGIVDADL---------FGAAFGGS----------GSNTAGLRADSRTDGDDPLSQLWLPPPAVVAPGPHGGGGGDGGLADSGTASLPKVQASEPLFDDDERDVKVAAAGLSDDPLSIMMQERAVARNISRHGGA-LHDDVDD---IAPGSPASADAMSVL 244
            AI WTP+LR   G+  G A T AA  A   AA+F  +PREQA AD HPLA+PRVKQR RR  XXXXXXXXXXXXX                                F A FG S                                    P  V     G G G+GG+ADS TA  P+ Q +  +F+D ERDVKVA AGLSDDPLS+MMQERAVARN+SRHGG  L DD+ D   + PGSP SA   SV+
Sbjct:    8 AITWTPILRNNDGDSCGPAGTTAACVAGAGAAAFRTLPREQALADKHPLAVPRVKQRPRRTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGNFAAVFGDSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAPESVP----GDGKGEGGVADSTTAHAPETQLA--VFNDVERDVKVAVAGLSDDPLSMMMQERAVARNMSRHGGGVLDDDMLDGAIMTPGSPGSAGTASVV 252          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13053.2416.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JPH3_9PHAE2.400e-2745.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLV5_ECTSI2.940e-2145.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13053contigL-elsbetiae_contig13053:2266..4174 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13053.2416.1mRNA_L-elsbetiae_contig13053.2416.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig13053 2264..4174 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig13053.2416.1 ID=prot_L-elsbetiae_contig13053.2416.1|Name=mRNA_L-elsbetiae_contig13053.2416.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=256bp
SIEQAQASEQRTAFDMKGAIRWTPLLRERGNREGSADTAADGATFDAASF
CAVPREQAEADAHPLALPRVKQRARRSTSTTTTTTTGARRRASTASRSFS
APAVSGAGIVDADLFGAAFGGSGSNTAGLRADSRTDGDDPLSQLWLPPPA
VVAPGPHGGGGGDGGLADSGTASLPKVQASEPLFDDDERDVKVAAAGLSD
DPLSIMMQERAVARNISRHGGALHDDVDDIAPGSPASADAMSVLGGGRSS
LGGSEA
back to top