prot_L-elsbetiae_contig13045.2412.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig13045.2412.1
Unique Nameprot_L-elsbetiae_contig13045.2412.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length127
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13045.2412.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 19..51
e-value: 900.0
score: 4.3
coord: 56..88
e-value: 3.3E-4
score: 30.0
coord: 93..125
e-value: 0.0044
score: 26.2
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 37..120
e-value: 9.3E-10
score: 37.9
IPR038538MTERF superfamily, mitochondrial/chloroplasticGENE3D1.25.70.10coord: 6..127
e-value: 9.8E-22
score: 79.4
NoneNo IPR availablePANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 31..86
NoneNo IPR availablePANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 68..123
NoneNo IPR availablePANTHERPTHR13068:SF147coord: 31..86
NoneNo IPR availablePANTHERPTHR13068:SF147coord: 68..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13045contigL-elsbetiae_contig13045:3707..5236 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13045.2412.1mRNA_L-elsbetiae_contig13045.2412.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig13045 3707..5236 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig13045.2412.1 ID=prot_L-elsbetiae_contig13045.2412.1|Name=mRNA_L-elsbetiae_contig13045.2412.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=127bp
LWSSASLIHVINSISPSQVKDIDISSTPHSCSVEENLEPKLAWLRERLGL
EGPDIGTMARRCPSIFIYSVEENLEPKLVWLRERLGLEEPNVASMVRHAP
GIFGCSVEENLEPKLAWLQNRMHLTKM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003690MTERF
IPR038538MTERF_sf