prot_L-elsbetiae_contig1304.2408.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1304.2408.1
Unique Nameprot_L-elsbetiae_contig1304.2408.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length193
Homology
BLAST of mRNA_L-elsbetiae_contig1304.2408.1 vs. uniprot
Match: A0A6H5L5P5_9PHAE (PDDEXK_1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L5P5_9PHAE)

HSP 1 Score: 238 bits (607), Expect = 3.670e-74
Identity = 123/179 (68.72%), Postives = 141/179 (78.77%), Query Frame = 0
Query:   11 GPPRHKLHPARHTFGDGEASAEGERLQGVAAGTSPTGAGVAGGEGSGAMSVTGIVDRLDRCADGTLRVVDYKTGKVPDLKYPEATNKRIMDDKFFQLQIYALLVDRVLGEVPGEMRLVYLKGAKSVTRKIDHAALPSVESELQSIWNDIFLSVRADSFPPRTSRLCDWCSFQDRCPAFQ 189
            G P H      H FG GE +A G  ++         G GVA    + +M+VTGIVDRLDRC DGTLRVVDYKTGK+P+L+Y +ATN+RIMD+KFFQLQIYALLV+RVLGEVPGEMRLVYLKG  SVTRKI+ AALPSVE EL+SIW++I  SVR DSFPPRTSRLCDWCSFQDRCPAF+
Sbjct:  242 GDPEHVELRMTHEFGGGETAA-GRHIEEEDGAGGQAGDGVAASNTASSMNVTGIVDRLDRCPDGTLRVVDYKTGKIPNLRYSKATNQRIMDEKFFQLQIYALLVERVLGEVPGEMRLVYLKGPASVTRKIEPAALPSVEGELRSIWDEIAGSVRRDSFPPRTSRLCDWCSFQDRCPAFE 419          
BLAST of mRNA_L-elsbetiae_contig1304.2408.1 vs. uniprot
Match: A0A835YV45_9STRA (RecB family exonuclease n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV45_9STRA)

HSP 1 Score: 157 bits (398), Expect = 3.600e-44
Identity = 80/142 (56.34%), Postives = 100/142 (70.42%), Query Frame = 0
Query:   49 GVAGGEGSGAMSVTGIVDRLDRCADGTLRVVDYKTGKVPDLKYPEATNKRIMDDKFFQLQIYALLVDRVLGEVPGEMRLVYLKGAKSVTRKIDHAALPSVESELQSIWNDIFLSVRADSFPPRTSRLCDWCSFQDRCPAFQA 190
            G AGG  S AM+VTGI+DRLDR ADG L VVDYKTGK P LKY  A N+RI+ +KF QL+IYALL  RV GE+P  + L+YL G   +T +++ + L   E EL   W+DI  ++    FPPRTSRLCDWCSF+  CPAF++
Sbjct:  161 GDAGGAPSVAMNVTGILDRLDRGADGQLAVVDYKTGKAPTLKYSPAVNERIIREKFQQLKIYALLAQRVHGEMPRRLVLLYLDGPARLTMEVEPSILDETERELWQTWHDIQRALATQHFPPRTSRLCDWCSFKPICPAFKS 302          
BLAST of mRNA_L-elsbetiae_contig1304.2408.1 vs. uniprot
Match: A0A6U1PX76_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1PX76_9STRA)

HSP 1 Score: 127 bits (319), Expect = 5.980e-32
Identity = 56/133 (42.11%), Postives = 91/133 (68.42%), Query Frame = 0
Query:   56 SGAMSVTGIVDRLDRCADGTLRVVDYKTGKVPDLKYPEATNKRIMDDKFFQLQIYALLVDRVLGEVPGEMRLVYLKGAKSVTRKIDHAALPSVESELQSIWNDIFLSVRADSFPPRTSRLCDWCSFQDRCPAF 188
            +G  +VTG++DRLDR ++G LRVVDYKTGK PDLKY    NKRI++DKFFQL++YA+++ +   ++P E++L+YL+    +T  +  A + +   EL+ +W+ +    +   F  + S+ C +CSF+ +CPA+
Sbjct:  216 TGTFNVTGVLDRLDRTSEGGLRVVDYKTGKGPDLKYSHEMNKRILEDKFFQLKMYAVMIAQDRQQIPVELKLMYLEDLTVLTMPLTAADVGATYIELKEVWDQMTAQCQTGDFKTKKSKFCHYCSFKSQCPAW 348          
BLAST of mRNA_L-elsbetiae_contig1304.2408.1 vs. uniprot
Match: W7U9E4_9STRA (PDDEXK_1 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U9E4_9STRA)

HSP 1 Score: 128 bits (321), Expect = 1.140e-31
Identity = 61/130 (46.92%), Postives = 87/130 (66.92%), Query Frame = 0
Query:   60 SVTGIVDRLD-RCADGTLRVVDYKTGKVPDLKYPEATNKRIMDDKFFQLQIYALLVDRVLGEVPGEMRLVYLKGAKSVTRKIDHAALPSVESELQSIWNDIFLSVRADSFPPRTSRLCDWCSFQDRCPAF 188
            SVTGI+DR+D     G   VVDYKTGK P LKY +A N+RIM+DKFFQL++YALL+++V    P  ++L+YL G   ++ ++    L   ++EL  +W  I  + +ADSFP    +LC+WCSF+  CPA+
Sbjct:  271 SVTGILDRVDVEPGSGEWVVVDYKTGKAPALKYSDAVNERIMNDKFFQLKVYALLLEQVKQRTPTRLKLIYLDGPTVMSMRLRREDLAETKTELLGLWERIVGAWKADSFPATPGKLCEWCSFKSICPAW 400          
BLAST of mRNA_L-elsbetiae_contig1304.2408.1 vs. uniprot
Match: A0A7V0IUC0_9ACTN (PD-(D/E)XK nuclease family protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7V0IUC0_9ACTN)

HSP 1 Score: 121 bits (303), Expect = 5.840e-30
Identity = 59/136 (43.38%), Postives = 82/136 (60.29%), Query Frame = 0
Query:   57 GAMSVTGIVDRLDRCADGTLRVVDYKTGKVPDLKYPEATNKRIMDDKFFQLQIYALLVDRVLGEVPGEMRLVYLKGAKSVTRKIDHAALPSVESELQSIWNDIFLSVRADSFPPRTSRLCDWCSFQDRCPAFQAES 192
            G M++ GI+DR+D   DG L + DYKTGK P  +Y  +         FF L+IYALL+   LG  P E+RL+YL  A      +D A L ++  +LQ++W  I  ++    FPP+   LC+WCSFQDRCPAF +E+
Sbjct:  169 GDMTIRGILDRVDETTDGDLIITDYKTGKAPPERYALSA--------FFALKIYALLIRTRLGRTPTELRLLYLGNATMYRVNVDDAQLDAMRRQLQALWKAINRALERQHFPPKPGPLCNWCSFQDRCPAFVSEA 296          
BLAST of mRNA_L-elsbetiae_contig1304.2408.1 vs. uniprot
Match: A0A7Y1X9B2_9ACTN (PD-(D/E)XK nuclease family protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7Y1X9B2_9ACTN)

HSP 1 Score: 120 bits (300), Expect = 6.060e-30
Identity = 57/135 (42.22%), Postives = 82/135 (60.74%), Query Frame = 0
Query:   57 GAMSVTGIVDRLDRCADGTLRVVDYKTGKVPDLKYPEATNKRIMDDKFFQLQIYALLVDRVLGEVPGEMRLVYLKGAKSVTRKIDHAALPSVESELQSIWNDIFLSVRADSFPPRTSRLCDWCSFQDRCPAFQAE 191
            G +++ GI+DR+D   +G L + DYKTGK P  ++  A         FF L+IYALL+   LG  P E+RL+YL G       I+   L  +E +L+++W  I  ++  ++FPPR  RLCDWCSF+DRCPAF  +
Sbjct:  127 GGITIRGILDRIDELPEGELVITDYKTGKAPPERFALAA--------FFALKIYALLIRHKLGRTPVEIRLLYLNGPTLYRLPINDGQLNGMEKQLRALWAAIDKAIDTNNFPPRPGRLCDWCSFKDRCPAFSTD 253          
BLAST of mRNA_L-elsbetiae_contig1304.2408.1 vs. uniprot
Match: A0A523F2B9_9BACT (PD-(D/E)XK nuclease family protein n=2 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A523F2B9_9BACT)

HSP 1 Score: 118 bits (296), Expect = 2.770e-29
Identity = 58/128 (45.31%), Postives = 80/128 (62.50%), Query Frame = 0
Query:   61 VTGIVDRLDRCADGTLRVVDYKTGKVPDLKYPEATNKRIMDDKFFQLQIYALLVDRVLGEVPGEMRLVYLKGAKSVTRKIDHAALPSVESELQSIWNDIFLSVRADSFPPRTSRLCDWCSFQDRCPAF 188
            + GI+DR+DR ADG L + DYKTGK P  KY  ++        FF L+IYALL+ +  GE P E+RL+YL G       ID   L +++ +L+++W  I  ++  D FP R  RLCDWCSFQ+ CPA+
Sbjct:  142 IRGILDRIDRDADGQLIITDYKTGKAPPEKYALSS--------FFALKIYALLIRKRTGETPKELRLLYLNGPTLYRLPIDDQQLDAMDVQLRALWKAIERALATDRFPTRRGRLCDWCSFQEICPAW 261          
BLAST of mRNA_L-elsbetiae_contig1304.2408.1 vs. uniprot
Match: A0A1F2XDZ6_9ACTN (PDDEXK_1 domain-containing protein n=1 Tax=Actinobacteria bacterium RBG_16_68_21 TaxID=1797204 RepID=A0A1F2XDZ6_9ACTN)

HSP 1 Score: 118 bits (295), Expect = 3.120e-29
Identity = 55/128 (42.97%), Postives = 80/128 (62.50%), Query Frame = 0
Query:   61 VTGIVDRLDRCADGTLRVVDYKTGKVPDLKYPEATNKRIMDDKFFQLQIYALLVDRVLGEVPGEMRLVYLKGAKSVTRKIDHAALPSVESELQSIWNDIFLSVRADSFPPRTSRLCDWCSFQDRCPAF 188
            + GI+DR++   DG+L + DYKTGK P  +Y            FF L+IYALL+ R  G  P E++L+YL G       ++ A L +++ +L+++W+ I  ++  D FPPR SRLCDWCSFQ+ CPAF
Sbjct:  130 IRGILDRMEEAPDGSLVITDYKTGKAPPERYALPA--------FFALKIYALLIRRRTGRTPAEIKLMYLNGPTVYRIAVNDAQLDAMDRQLRALWDAIDRAIGEDRFPPRVSRLCDWCSFQEICPAF 249          
BLAST of mRNA_L-elsbetiae_contig1304.2408.1 vs. uniprot
Match: A0A3E0PYA9_9ACTN (PD-(D/E)XK nuclease family protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A3E0PYA9_9ACTN)

HSP 1 Score: 118 bits (296), Expect = 5.430e-29
Identity = 55/128 (42.97%), Postives = 80/128 (62.50%), Query Frame = 0
Query:   61 VTGIVDRLDRCADGTLRVVDYKTGKVPDLKYPEATNKRIMDDKFFQLQIYALLVDRVLGEVPGEMRLVYLKGAKSVTRKIDHAALPSVESELQSIWNDIFLSVRADSFPPRTSRLCDWCSFQDRCPAF 188
            + GI+DR+DR +DG L + DYKTGK P  +Y            FF L+IYALL+ +  GE P E+RL+YL G      ++D   L  ++S+L+++W  I  ++  + +PP+  RLCDWCSFQ+ CPAF
Sbjct:  179 IRGILDRIDRDSDGRLVITDYKTGKAPPERYALPA--------FFALKIYALLIRKRTGETPKEVRLLYLNGPTLYRLEVDDKQLDGIDSQLRALWTAIERAMSTNRYPPKPGRLCDWCSFQEICPAF 298          
BLAST of mRNA_L-elsbetiae_contig1304.2408.1 vs. uniprot
Match: A0A5A9ZS36_9ACTN (RecB family exonuclease n=1 Tax=Dietzia sp. ANT_WB102 TaxID=2597345 RepID=A0A5A9ZS36_9ACTN)

HSP 1 Score: 118 bits (295), Expect = 7.320e-29
Identity = 56/126 (44.44%), Postives = 76/126 (60.32%), Query Frame = 0
Query:   63 GIVDRLDRCADGTLRVVDYKTGKVPDLKYPEATNKRIMDDKFFQLQIYALLVDRVLGEVPGEMRLVYLKGAKSVTRKIDHAALPSVESELQSIWNDIFLSVRADSFPPRTSRLCDWCSFQDRCPAF 188
            G +DR+D    G +RVVDYKTGK P        N R      FQ++ YAL+  R+ G +P +++L+YLK    +T   DHA+L   E+ L  +W++I  +     F PRTSRLCDWC+ QDRCPAF
Sbjct:  153 GFLDRVDVAPTGEVRVVDYKTGKPP--------NPRYQQQAMFQMRFYALMYQRIHGVLPAQLKLIYLKNGSWLTFTPDHASLIETEASLDMLWSEIEQAGETGDFLPRTSRLCDWCNHQDRCPAF 270          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1304.2408.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L5P5_9PHAE3.670e-7468.72PDDEXK_1 domain-containing protein n=2 Tax=Ectocar... [more]
A0A835YV45_9STRA3.600e-4456.34RecB family exonuclease n=1 Tax=Tribonema minus Ta... [more]
A0A6U1PX76_9STRA5.980e-3242.11Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
W7U9E4_9STRA1.140e-3146.92PDDEXK_1 domain-containing protein n=2 Tax=Monodop... [more]
A0A7V0IUC0_9ACTN5.840e-3043.38PD-(D/E)XK nuclease family protein n=1 Tax=Actinom... [more]
A0A7Y1X9B2_9ACTN6.060e-3042.22PD-(D/E)XK nuclease family protein n=1 Tax=Acidimi... [more]
A0A523F2B9_9BACT2.770e-2945.31PD-(D/E)XK nuclease family protein n=2 Tax=Acidoba... [more]
A0A1F2XDZ6_9ACTN3.120e-2942.97PDDEXK_1 domain-containing protein n=1 Tax=Actinob... [more]
A0A3E0PYA9_9ACTN5.430e-2942.97PD-(D/E)XK nuclease family protein n=1 Tax=Actinom... [more]
A0A5A9ZS36_9ACTN7.320e-2944.44RecB family exonuclease n=1 Tax=Dietzia sp. ANT_WB... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038726PD-(D/E)XK endonuclease-like domain, AddAB-typePFAMPF12705PDDEXK_1coord: 44..186
e-value: 1.5E-18
score: 67.6
IPR011335Restriction endonuclease type II-likeSUPERFAMILY52980Restriction endonuclease-likecoord: 60..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1304contigL-elsbetiae_contig1304:3859..6195 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1304.2408.1mRNA_L-elsbetiae_contig1304.2408.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1304 3717..6268 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1304.2408.1 ID=prot_L-elsbetiae_contig1304.2408.1|Name=mRNA_L-elsbetiae_contig1304.2408.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=193bp
MLAYERHARAGPPRHKLHPARHTFGDGEASAEGERLQGVAAGTSPTGAGV
AGGEGSGAMSVTGIVDRLDRCADGTLRVVDYKTGKVPDLKYPEATNKRIM
DDKFFQLQIYALLVDRVLGEVPGEMRLVYLKGAKSVTRKIDHAALPSVES
ELQSIWNDIFLSVRADSFPPRTSRLCDWCSFQDRCPAFQAES*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038726PDDEXK_AddAB-type
IPR011335Restrct_endonuc-II-like