prot_L-elsbetiae_contig13002.2386.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig13002.2386.1
Unique Nameprot_L-elsbetiae_contig13002.2386.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length138
Homology
BLAST of mRNA_L-elsbetiae_contig13002.2386.1 vs. uniprot
Match: A0A6H5KZC8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZC8_9PHAE)

HSP 1 Score: 201 bits (510), Expect = 1.340e-63
Identity = 100/137 (72.99%), Postives = 113/137 (82.48%), Query Frame = 0
Query:    1 MDSDFASKATDRRSVYSALVMCAGGWVSFLFRTQRSVALSSTEAEYVAMADGLKEAIFLRGLWSLIFPGRHIGTTLVHEDNVGALHLANNPRITPNSTHIDIRHHYFRESVARGEFKIVHVPSNHQHEDFLTKPLPR 137
            +DSDFA+KATDRRSV  ALVM AG  V +L RTQ+SV LSSTEAEYVAM+DG+KEAIFLR LW  IFPGR +G T V EDNVGA+HLA+NP  TPNS HIDIRHH+ RE VARGEFK+VHV S+ Q  DFLTKPLP+
Sbjct:   27 VDSDFANKATDRRSVSGALVMFAGACVMYLCRTQKSVTLSSTEAEYVAMSDGMKEAIFLRYLWKFIFPGRDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIRERVARGEFKVVHVRSDLQRADFLTKPLPK 163          
BLAST of mRNA_L-elsbetiae_contig13002.2386.1 vs. uniprot
Match: A0A6H5L5Q2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5Q2_9PHAE)

HSP 1 Score: 205 bits (522), Expect = 3.300e-63
Identity = 99/137 (72.26%), Postives = 113/137 (82.48%), Query Frame = 0
Query:    1 MDSDFASKATDRRSVYSALVMCAGGWVSFLFRTQRSVALSSTEAEYVAMADGLKEAIFLRGLWSLIFPGRHIGTTLVHEDNVGALHLANNPRITPNSTHIDIRHHYFRESVARGEFKIVHVPSNHQHEDFLTKPLPR 137
            +DSD+ASKATDRRSV   +VMCAG  VSF  RTQ+SV LSSTEAEY AMADG+KEAIFLR LWS IFP   +G T++ EDNVGALHLANNP  TPNS HID+RHH+ RE V RGEFK+V+VPS+ QH DFLTKPLP+
Sbjct:  196 VDSDYASKATDRRSVSGGVVMCAGSCVSFFSRTQKSVTLSSTEAEYAAMADGMKEAIFLRYLWSFIFPDGDVGCTVIKEDNVGALHLANNPATTPNSKHIDVRHHFIRERVDRGEFKVVYVPSHLQHADFLTKPLPK 332          
BLAST of mRNA_L-elsbetiae_contig13002.2386.1 vs. uniprot
Match: A0A6H5KPR3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPR3_9PHAE)

HSP 1 Score: 192 bits (487), Expect = 2.690e-59
Identity = 96/133 (72.18%), Postives = 108/133 (81.20%), Query Frame = 0
Query:    1 MDSDFASKATDRRSVYSALVMCAGGWVSFLFRTQRSVALSSTEAEYVAMADGLKEAIFLRGLWSLIFPGRHIGTTLVHEDNVGALHLANNPRITPNSTHIDIRHHYFRESVARGEFKIVHVPSNHQHEDFLTK 133
            +DSDFA+KATDRRSV  ALVM AG  V +L R Q+SV LSSTEAEY+AM DG+KEAIFLR LW  IFPGR +G T V EDNVGA+HLA+NP  TPNS HIDIRHH+ RE VARGEFK+VHVPS+ Q  DFLTK
Sbjct:   92 VDSDFANKATDRRSVSGALVMIAGACVMYLCRMQKSVTLSSTEAEYMAMFDGMKEAIFLRYLWKFIFPGRDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIRERVARGEFKVVHVPSDLQRADFLTK 224          
BLAST of mRNA_L-elsbetiae_contig13002.2386.1 vs. uniprot
Match: A0A6H5JWG1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWG1_9PHAE)

HSP 1 Score: 201 bits (510), Expect = 4.120e-59
Identity = 100/137 (72.99%), Postives = 113/137 (82.48%), Query Frame = 0
Query:    1 MDSDFASKATDRRSVYSALVMCAGGWVSFLFRTQRSVALSSTEAEYVAMADGLKEAIFLRGLWSLIFPGRHIGTTLVHEDNVGALHLANNPRITPNSTHIDIRHHYFRESVARGEFKIVHVPSNHQHEDFLTKPLPR 137
            +DSDFA+KATDRRSV  ALVM AG  V +L RTQ+SV LSSTEAEYVAM+DG+KEAIFLR LW  IFPGR +G T V EDNVGA+HLA+NP  TPNS HIDIRHH+ RE VARGEFK+VHV S+ Q  DFLTKPLP+
Sbjct:  426 VDSDFANKATDRRSVSGALVMFAGACVMYLCRTQKSVTLSSTEAEYVAMSDGMKEAIFLRYLWKFIFPGRDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIRERVARGEFKVVHVRSDLQRADFLTKPLPK 562          
BLAST of mRNA_L-elsbetiae_contig13002.2386.1 vs. uniprot
Match: A0A6H5KGK7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGK7_9PHAE)

HSP 1 Score: 201 bits (510), Expect = 8.930e-58
Identity = 100/137 (72.99%), Postives = 113/137 (82.48%), Query Frame = 0
Query:    1 MDSDFASKATDRRSVYSALVMCAGGWVSFLFRTQRSVALSSTEAEYVAMADGLKEAIFLRGLWSLIFPGRHIGTTLVHEDNVGALHLANNPRITPNSTHIDIRHHYFRESVARGEFKIVHVPSNHQHEDFLTKPLPR 137
            +DSDFA+KATDRRSV  ALVM AG  V +L RTQ+SV LSSTEAEYVAM+DG+KEAIFLR LW  IFPGR +G T V EDNVGA+HLA+NP  TPNS HIDIRHH+ RE VARGEFK+VHV S+ Q  DFLTKPLP+
Sbjct:  650 VDSDFANKATDRRSVSGALVMFAGACVMYLCRTQKSVTLSSTEAEYVAMSDGMKEAIFLRYLWKFIFPGRDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIRERVARGEFKVVHVRSDLQRADFLTKPLPK 786          
BLAST of mRNA_L-elsbetiae_contig13002.2386.1 vs. uniprot
Match: A0A6H5JCD8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCD8_9PHAE)

HSP 1 Score: 202 bits (514), Expect = 1.130e-57
Identity = 98/137 (71.53%), Postives = 112/137 (81.75%), Query Frame = 0
Query:    1 MDSDFASKATDRRSVYSALVMCAGGWVSFLFRTQRSVALSSTEAEYVAMADGLKEAIFLRGLWSLIFPGRHIGTTLVHEDNVGALHLANNPRITPNSTHIDIRHHYFRESVARGEFKIVHVPSNHQHEDFLTKPLPR 137
            +DSD+ASKATDRRSV   +VMCAG  VSF  RTQ+SV LSSTEAEY AMADG+KEAIFLR LWS I P   +G T++ EDNVGALHLANNP  TPNS HID+RHH+ RE V RGEFK+V+VPS+ QH DFLTKPLP+
Sbjct:  964 VDSDYASKATDRRSVSGGVVMCAGSCVSFFSRTQKSVTLSSTEAEYAAMADGMKEAIFLRYLWSFISPDGDVGCTVIKEDNVGALHLANNPATTPNSKHIDVRHHFIRERVDRGEFKVVYVPSHLQHADFLTKPLPK 1100          
BLAST of mRNA_L-elsbetiae_contig13002.2386.1 vs. uniprot
Match: A0A6H5KAC2_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAC2_9PHAE)

HSP 1 Score: 201 bits (510), Expect = 4.480e-57
Identity = 100/137 (72.99%), Postives = 113/137 (82.48%), Query Frame = 0
Query:    1 MDSDFASKATDRRSVYSALVMCAGGWVSFLFRTQRSVALSSTEAEYVAMADGLKEAIFLRGLWSLIFPGRHIGTTLVHEDNVGALHLANNPRITPNSTHIDIRHHYFRESVARGEFKIVHVPSNHQHEDFLTKPLPR 137
            +DSDFA+KATDRRSV  ALVM AG  V +L RTQ+SV LSSTEAEYVAM+DG+KEAIFLR LW  IFPGR +G T V EDNVGA+HLA+NP  TPNS HIDIRHH+ RE VARGEFK+VHV S+ Q  DFLTKPLP+
Sbjct: 1726 VDSDFANKATDRRSVSGALVMFAGACVMYLCRTQKSVTLSSTEAEYVAMSDGMKEAIFLRYLWKFIFPGRDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIRERVARGEFKVVHVRSDLQRADFLTKPLPK 1862          
BLAST of mRNA_L-elsbetiae_contig13002.2386.1 vs. uniprot
Match: A0A6H5K5L3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5L3_9PHAE)

HSP 1 Score: 190 bits (482), Expect = 4.200e-55
Identity = 96/137 (70.07%), Postives = 110/137 (80.29%), Query Frame = 0
Query:    1 MDSDFASKATDRRSVYSALVMCAGGWVSFLFRTQRSVALSSTEAEYVAMADGLKEAIFLRGLWSLIFPGRHIGTTLVHEDNVGALHLANNPRITPNSTHIDIRHHYFRESVARGEFKIVHVPSNHQHEDFLTKPLPR 137
            +DSDFA+KATDRRSV  ALVM AG  V +L RTQ+SV LSSTEAEYVAM+DG+ EAIFLR LW +IF    +G T V EDNVGA+HLA+NP  TPNS HIDIRHH+ RE VARGEFK+VHV S+ Q  DFLTKPLP+
Sbjct:  413 VDSDFANKATDRRSVSGALVMFAGACVMYLCRTQKSVTLSSTEAEYVAMSDGMTEAIFLRYLWKIIFSVLDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIRERVARGEFKVVHVRSDLQRADFLTKPLPK 549          
BLAST of mRNA_L-elsbetiae_contig13002.2386.1 vs. uniprot
Match: A0A6H5K862_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K862_9PHAE)

HSP 1 Score: 193 bits (491), Expect = 1.630e-54
Identity = 98/137 (71.53%), Postives = 112/137 (81.75%), Query Frame = 0
Query:    1 MDSDFASKATDRRSVYSALVMCAGGWVSFLFRTQRSVALSSTEAEYVAMADGLKEAIFLRGLWSLIFPGRHIGTTLVHEDNVGALHLANNPRITPNSTHIDIRHHYFRESVARGEFKIVHVPSNHQHEDFLTKPLPR 137
            +DSDFA+KATDRRSV  ALVM AG  V +L RTQ+SV LSSTEAEYVAM+DG+K AIF+R LW  IFPGR +G T V EDNVGA+HLA+NP  TPNS HIDIRHH+ RE VARGEFK+VHV S+ Q  DFLTKPLP+
Sbjct: 2144 VDSDFANKATDRRSVSGALVMFAGACVMYLCRTQKSVTLSSTEAEYVAMSDGMK-AIFMRYLWKFIFPGRDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIRERVARGEFKVVHVRSDLQRADFLTKPLPK 2279          
BLAST of mRNA_L-elsbetiae_contig13002.2386.1 vs. uniprot
Match: A0A6H5KAQ1_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAQ1_9PHAE)

HSP 1 Score: 192 bits (489), Expect = 2.290e-54
Identity = 96/137 (70.07%), Postives = 109/137 (79.56%), Query Frame = 0
Query:    1 MDSDFASKATDRRSVYSALVMCAGGWVSFLFRTQRSVALSSTEAEYVAMADGLKEAIFLRGLWSLIFPGRHIGTTLVHEDNVGALHLANNPRITPNSTHIDIRHHYFRESVARGEFKIVHVPSNHQHEDFLTKPLPR 137
            +DSDFA+KATDRRSV  ALVM AG  V +L RTQ+SV LSSTEAEYVAM+DG+KEAIFLR LW  +FPGR +G T V EDNVGA HLA+    TPNS HIDIRHH+ RE VARGEFK+VH  S+ Q  DFLTKPLP+
Sbjct:  842 VDSDFANKATDRRSVSGALVMFAGACVMYLCRTQKSVTLSSTEAEYVAMSDGMKEAIFLRHLWKFVFPGRDVGCTPVWEDNVGAFHLASKSASTPNSKHIDIRHHFIRERVARGEFKVVHARSDLQRADFLTKPLPK 978          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13002.2386.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZC8_9PHAE1.340e-6372.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L5Q2_9PHAE3.300e-6372.26Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KPR3_9PHAE2.690e-5972.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWG1_9PHAE4.120e-5972.99Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KGK7_9PHAE8.930e-5872.99Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JCD8_9PHAE1.130e-5771.53Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KAC2_9PHAE4.480e-5772.99Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5K5L3_9PHAE4.200e-5570.07Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K862_9PHAE1.630e-5471.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KAQ1_9PHAE2.290e-5470.07Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 2..117
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 2..117
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..13
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 14..31
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 32..137
NoneNo IPR availableTMHMMTMhelixcoord: 15..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13002contigL-elsbetiae_contig13002:1970..2383 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13002.2386.1mRNA_L-elsbetiae_contig13002.2386.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig13002 1947..4422 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig13002.2386.1 ID=prot_L-elsbetiae_contig13002.2386.1|Name=mRNA_L-elsbetiae_contig13002.2386.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=138bp
MDSDFASKATDRRSVYSALVMCAGGWVSFLFRTQRSVALSSTEAEYVAMA
DGLKEAIFLRGLWSLIFPGRHIGTTLVHEDNVGALHLANNPRITPNSTHI
DIRHHYFRESVARGEFKIVHVPSNHQHEDFLTKPLPR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like