mRNA_L-elsbetiae_contig1300.2383.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1300.2383.1 vs. uniprot
Match: D7FXY2_ECTSI (Ketoacyl_synth_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY2_ECTSI) HSP 1 Score: 454 bits (1167), Expect = 2.070e-156 Identity = 239/287 (83.28%), Postives = 252/287 (87.80%), Query Frame = 1 Query: 1 QDMIQIGRCERMVVIAGDDASGEALLPWIGNGFRALGAASIAADPADAALPFDVRRNGMLLGAGGIGMVLETEGAAARRHCEAVGIRASLPPPANGDANGTAAGGGAMKARLLETQISNSAYHGASMDKHHIALELERFLGAIQRNWGISRDAIAEEGVYFSHETCTHATPTASCAFNEVSALRQCFGEDLLSRLVIINTKACYLPAELRPGFTGHPMGVSFEDVAAVEALFRGVIPPTANSPSVDPALGKLRLSTGGVYPAKYAMRFAAGFGSQVAFALYASVDAV 861 QDMIQIGRCERMVVIAGDDASGE LLPWIGNGFRALGA+SIAADP+DAALPFD RRNGMLLGAGGIGMVLETEGAAARRHCEAVGIRAS P + G MKARLLETQISNSAYHGASMDKHHIA+ELERFL A++RNWGISRDAIAE GVYFSHETCTHATPTASCAFNEV ALRQCFGE+LLSRLVIINTK GFTGHPMGVSFEDVAAVE L RG+IPPTAN+P+VDP+LGKLRLS GG Y AKYAMRFAAGFGSQVAFALYA+VD+V Sbjct: 190 QDMIQIGRCERMVVIAGDDASGEVLLPWIGNGFRALGASSIAADPSDAALPFDARRNGMLLGAGGIGMVLETEGAAARRHCEAVGIRASQPXXXXXXSTN-----GVMKARLLETQISNSAYHGASMDKHHIAIELERFLVAMERNWGISRDAIAESGVYFSHETCTHATPTASCAFNEVWALRQCFGEELLSRLVIINTK----------GFTGHPMGVSFEDVAAVEVLHRGIIPPTANNPAVDPSLGKLRLSQGGAYAAKYAMRFAAGFGSQVAFALYAAVDSV 461
BLAST of mRNA_L-elsbetiae_contig1300.2383.1 vs. uniprot
Match: A0A6H5JDP7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDP7_9PHAE) HSP 1 Score: 456 bits (1173), Expect = 9.360e-152 Identity = 241/289 (83.39%), Postives = 254/289 (87.89%), Query Frame = 1 Query: 1 QDMIQIGRCERMVVIAGDDASGEALLPWIGNGFRALGAASIAADPADAALPFDVRRNGMLLGAGGIGMVLETEGAAARRHCEAVGIRAS--LPPPANGDANGTAAGGGAMKARLLETQISNSAYHGASMDKHHIALELERFLGAIQRNWGISRDAIAEEGVYFSHETCTHATPTASCAFNEVSALRQCFGEDLLSRLVIINTKACYLPAELRPGFTGHPMGVSFEDVAAVEALFRGVIPPTANSPSVDPALGKLRLSTGGVYPAKYAMRFAAGFGSQVAFALYASVDAV 861 QDMIQIGRCERMVVIAGDDASGE LLPWIGNGFRALGA+SIAADP+DAALPFD RRNGMLLGAGGIGMVLETEGAAARRHCEAVGIRAS PPP+ G MKARLLETQISNSAYHGASMDKHHIA+ELERFL A++RNWGISRDAIAE GVYFSHETCTHATPTASCAFNEV ALRQCFGE+LLSRLVIINTK GFTGHPMGVSFEDVAAVE L RG+IPPTAN+P+VDP+LGKLRLS GG Y AKYAMRFAAGFGSQVAFALYA+VD+V Sbjct: 617 QDMIQIGRCERMVVIAGDDASGEVLLPWIGNGFRALGASSIAADPSDAALPFDARRNGMLLGAGGIGMVLETEGAAARRHCEAVGIRASQPTPPPSTN---------GVMKARLLETQISNSAYHGASMDKHHIAIELERFLVAMERNWGISRDAIAESGVYFSHETCTHATPTASCAFNEVWALRQCFGEELLSRLVIINTK----------GFTGHPMGVSFEDVAAVEVLHRGIIPPTANNPAVDPSLGKLRLSQGGAYAAKYAMRFAAGFGSQVAFALYAAVDSV 886
BLAST of mRNA_L-elsbetiae_contig1300.2383.1 vs. uniprot
Match: A0A7S2XTA8_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XTA8_9STRA) HSP 1 Score: 293 bits (749), Expect = 4.550e-95 Identity = 165/286 (57.69%), Postives = 202/286 (70.63%), Query Frame = 1 Query: 1 QDMIQIGRCERMVVIAGDDASGEALLPWIGNGFRALGAASIAADPADAALPFDVRRNGMLLGAGGIGMVLETEGAAARRHCEA-VGIRASLPPPANGDANGTAAGGGAMKARLLETQISNSAYHGASMDKHHIALELERFLGAIQRNWGISRDAIAEEGVYFSHETCTHATPTASCAFNEVSALRQCFGEDLLSRLVIINTKACYLPAELRPGFTGHPMGVSFEDVAAVEALFRGVIPPTANSPSVDPALGKLRLSTGGVYPAKYAMRFAAGFGSQVAFALYASVD 855 QDM+ GR ER+VV+AGD+ASGE L+PW+G+GFRALGAA+I A DAALPFD RR+GM+LGAGGIGMVLETE ++ R A GI S+ KARLL TQ SNSAYHGA++D+ HIA EL+RFL ++ GIS+ IA GVYFSHET THA+ +SC+ NEV+ALR+ G+ LLS+L+I+NTK GFTGHPMGVSFEDVAAVE L + V+PP N D LG+L +S GG Y +YA+RFAAGFGSQVAFALYA+ + Sbjct: 67 QDMLISGRAERVVVVAGDNASGETLMPWLGSGFRALGAATIEASVEDAALPFDKRRSGMILGAGGIGMVLETETSSMERIKNAGPGISCSV------------------KARLLATQYSNSAYHGAALDRKHIASELKRFLTDVELIHGISKAEIATHGVYFSHETSTHASSASSCSGNEVAALREALGDHLLSKLLILNTK----------GFTGHPMGVSFEDVAAVEVLMKQVVPPVVNFKEKDDYLGELNISKGGPYACRYALRFAAGFGSQVAFALYATAE 324
BLAST of mRNA_L-elsbetiae_contig1300.2383.1 vs. uniprot
Match: A0A836C9U2_9STRA (Hydroxymethylglutaryl-coenzyme A synthase N terminal-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9U2_9STRA) HSP 1 Score: 307 bits (787), Expect = 2.700e-93 Identity = 176/296 (59.46%), Postives = 202/296 (68.24%), Query Frame = 1 Query: 1 QDMIQIGRCERMVVIAGDDASGEALLPWIGNGFRALGAASIAADPADAALPFDVRRNGMLLGAGGIGMVLETEGAAA--------RRHCEAVGIRASLPPPANGDANGTAAGGGAMKARLLETQISNSAYHGASMDKHHIALELERFLGAIQRNWGISRDAIAEEGVYFSHETCTHATPTASCAFNEVSALRQCFGEDLLSRLVIINTKACYLPAELRPGFTGHPMGVSFEDVAAVEALFRGVIPPTANSPSVDPALGKLRLSTGGVYPAKYAMRFAAGFGSQVAFALYASVDAVA 864 QDM+ +GR RM+VIAGDDASG+ALLPW+GNGFRALGAASIAA A+ PFD RNGM+LG+G IGMVLET AAA RR C ARLLETQISNSA+HGASMD+ HIA E+ERFL +++ G++R IA GVYFSHET THA+PTASCA+NE+ ALR CFG LL L +INTK GFTGHPMGVSFEDVAAV+ L GV+PPTAN+ VDP LG L+LS GG KYA+RFAAGFGSQVA ALYA+ D A Sbjct: 813 QDMLTVGRAARMIVIAGDDASGDALLPWVGNGFRALGAASIAATAEAASRPFDAARNGMILGSGAIGMVLETRAAAAAAARPLAARRRC----------------------------ARLLETQISNSAHHGASMDRVHIAREMERFLASVEARHGVTRADIAARGVYFSHETGTHASPTASCAYNEIWALRACFGA-LLPSLTVINTK----------GFTGHPMGVSFEDVAAVQVLRSGVLPPTANTVDVDPTLGDLKLSRGGRSDVKYALRFAAGFGSQVALALYAASDEAA 1069
BLAST of mRNA_L-elsbetiae_contig1300.2383.1 vs. uniprot
Match: A0A7S2RGL0_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RGL0_9STRA) HSP 1 Score: 292 bits (748), Expect = 1.470e-92 Identity = 159/285 (55.79%), Postives = 201/285 (70.53%), Query Frame = 1 Query: 1 QDMIQIGRCERMVVIAGDDASGEALLPWIGNGFRALGAASIAADPADAALPFDVRRNGMLLGAGGIGMVLETEGAAARRHCEAVGIRASLPPPANGDANGTAAGGGAMKARLLETQISNSAYHGASMDKHHIALELERFLGAIQRNWGISRDAIAEEGVYFSHETCTHATPTASCAFNEVSALRQCFGEDLLSRLVIINTKACYLPAELRPGFTGHPMGVSFEDVAAVEALFRGVIPPTANSPSVDPALGKLRLSTGGVYPAKYAMRFAAGFGSQVAFALYASVD 855 QDM+ GR ER+VVIAGD+ASG+ LLPW+G+GFRALGAA+ A DAALPFD RR+GM+LGAGGIG+VLETE ++ R N D+ + + +++ARLL TQ SNSA+HGA++D+ HIA ELERFL ++ G+S+ +A GVYFSHETCTHA ++SCA NEV+ALR+ FG +LLS+++I+NTK GFTGHPMGVSFEDVAAV+ L +PP N D LG L +S GG YP +YA+RFAAGFGSQV FALYA+ Sbjct: 241 QDMLISGRAERVVVIAGDNASGKTLLPWLGSGFRALGAATTEAAVEDAALPFDKRRSGMILGAGGIGLVLETESSSQNRSSTI-----------NSDSIDSDSSQFSVRARLLATQYSNSAFHGAALDRKHIASELERFLSEVEIVHGVSKAEVATHGVYFSHETCTHANSSSSCAGNEVAALREAFGNELLSKMLILNTK----------GFTGHPMGVSFEDVAAVQVLMTQTVPPVVNYKEKDDYLGDLNISKGGPYPCRYALRFAAGFGSQVVFALYATAQ 504
BLAST of mRNA_L-elsbetiae_contig1300.2383.1 vs. uniprot
Match: A0A4D9DA31_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DA31_9STRA) HSP 1 Score: 308 bits (788), Expect = 3.270e-92 Identity = 172/304 (56.58%), Postives = 213/304 (70.07%), Query Frame = 1 Query: 1 QDMIQIGRCERMVVIAGDDASGEALLPWIGNGFRALGAASIAADPADAALPFDVRRNGMLLGAGGIGMVLETEGAAARRHCEAVGI------RASLPPPANGDANGTAAGGG---------------AMKARLLETQISNSAYHGASMDKHHIALELERFLGAIQRNWGISRDAIAEEGVYFSHETCTHATPTASCAFNEVSALRQCFGEDLLSRLVIINTKACYLPAELRPGFTGHPMGVSFEDVAAVEALFRGVIPPTAN--SPSVDPALGKLRLSTGGVYPAKYAMRFAAGFGSQVAFALY 843 QD+IQ GRCER+VVIA D+ASG+ L+PW+G+GFRALGAASIAA A+AA+PFD RR G++LGAG IGMVLETE A ARR+ E G+ R S A+ A+ G A++ RL++TQ SNSAYHGA++D+HHIA ELERFL A+++ +GI+R AIA EGVY SHET THA+ +SCA NE+ ALR CFGE+ + LVI+NTK G+TGHPMGVSFED+AAV+ L G+IP AN S DP LG + L GG Y A+YA+RF+AGFGSQVAFALY Sbjct: 1037 QDIIQQGRCERLVVIASDNASGDVLIPWLGSGFRALGAASIAATVAEAAIPFDKRRTGLVLGAGAIGMVLETEAAVARRYAEKTGLLPLSLTRNSSSASTTSTASSLASRSGPTATISEQHIKDFGLALRIRLIDTQYSNSAYHGAALDQHHIAGELERFLVALEKKFGITRQAIAREGVYLSHETSTHASDASSCAANEIFALRTCFGEEGMKNLVILNTK----------GYTGHPMGVSFEDIAAVQILRSGIIPRVANLDEASTDPYLGSINLGKGGKYAARYALRFSAGFGSQVAFALY 1330
BLAST of mRNA_L-elsbetiae_contig1300.2383.1 vs. uniprot
Match: A0A812PXM5_SYMMI (Sch1 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812PXM5_SYMMI) HSP 1 Score: 288 bits (737), Expect = 1.600e-91 Identity = 163/287 (56.79%), Postives = 199/287 (69.34%), Query Frame = 1 Query: 4 DMIQIGRCERMVVIAGDDASGEALLPWIGNGFRALGAASIAADPADAALPFDVRRNGMLLGAGGIGMVLETEGAAARRHCEAV--GIRASLPPPANGDANGTAAGGGAMKARLLETQISNSAYHGASMDKHHIALELERFLGAIQRNWGISRDAIAEEGVYFSHETCTHATPTASCAFNEVSALRQCFGEDLLSRLVIINTKACYLPAELRPGFTGHPMGVSFEDVAAVEALFRGVIPPTANSPSVDPALGK-LRLSTGGVYPAKYAMRFAAGFGSQVAFALYASVD 855 DMIQIGR ERM+VIAGD+AS +AL+PW+GNGFRALGAA+I DAA PFD R+GM+LG+GGIGMVLE+E A RRH A+ G ++ PA K RLL + +NSAYHGA++D+ HIA E+ERF+ + +R I R IA+ GVYFSHET T+A+PTASCA NE+ LR+ FGED L+I+NTK GFTGHPMGVSFEDV AVE L G +P AN +DP LG +RLS GG+YP +YA+RFAAGFGSQ+A ALY VD Sbjct: 193 DMIQIGRAERMIVIAGDNASSDALMPWLGNGFRALGAATICPRIKDAARPFDAMRSGMILGSGGIGMVLESEEGARRRHVTALKYGQAHAIKRPA-------------FKCRLLGSLYTNSAYHGAALDREHIAEEMERFIASAEREHSIHRSEIAKYGVYFSHETSTNASPTASCASNELYGLRKVFGEDF-KNLLILNTK----------GFTGHPMGVSFEDVVAVEVLSTGRVPAIANLEHIDPHLGNNVRLSPGGMYPCRYALRFAAGFGSQIAMALYGGVD 455
BLAST of mRNA_L-elsbetiae_contig1300.2383.1 vs. uniprot
Match: A0A1E7FF62_9STRA (Ketoacyl_synth_N domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FF62_9STRA) HSP 1 Score: 287 bits (735), Expect = 4.750e-90 Identity = 163/283 (57.60%), Postives = 197/283 (69.61%), Query Frame = 1 Query: 1 QDMIQIGRCERMVVIAGDDASGEALLPWIGNGFRALGAASIAADPADAALPFDVRRNGMLLGAGGIGMVLETEGAAARRHCEAVGIRASLPPPANGDANGTAAGGGAMKARLLETQISNSAYHGASMDKHHIALELERFLGAIQRNWGISRDAIAEEGVYFSHETCTHATPTASCAFNEVSALRQCFGEDLLSRLVIINTKACYLPAELRPGFTGHPMGVSFEDVAAVEALFRGVIPPTANSPSVDPALGKLRLSTGGVYPAKYAMRFAAGFGSQVAFALYAS 849 QDM+ GR ER+VV+AGD+ASGE L PW+G+GFRALGAA+ DAALPFD RR+GM+LGAGGIG+VLETE ++ R + SL P +KARLL TQ SNSAYHGA++D+ HIA EL+RFL I+ GIS+ IA GVYFSHETCTHA+ +SC+ NEV+ALR FG++LLS+L+I+NTK GFTGHPMGVSFEDV AVE L R +PP N D LG L+LS GG Y +YA+RFAAGFGSQV FALYA+ Sbjct: 297 QDMLISGRAERVVVVAGDNASGETLFPWLGSGFRALGAATTKGVAKDAALPFDKRRSGMILGAGGIGIVLETELSSLERQ------KNSLNPFE-------------IKARLLATQYSNSAYHGAALDRKHIASELKRFLSDIELIHGISKAEIATHGVYFSHETCTHASSASSCSGNEVAALRVAFGDELLSKLLILNTK----------GFTGHPMGVSFEDVCAVEVLLRQTVPPIPNYAERDDYLGDLKLSKGGPYACRYALRFAAGFGSQVVFALYAT 550
BLAST of mRNA_L-elsbetiae_contig1300.2383.1 vs. uniprot
Match: B8BSY1_THAPS (Ketoacyl_synth_N domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BSY1_THAPS) HSP 1 Score: 287 bits (735), Expect = 6.320e-90 Identity = 164/284 (57.75%), Postives = 197/284 (69.37%), Query Frame = 1 Query: 1 QDMIQIGRCERMVVIAGDDASGEALLPWIGNGFRALGAASIAADPADAALPFDVRRNGMLLGAGGIGMVLETEGAAARRHCEAVGIRASLPP-PANGDANGTAAGGGAMKARLLETQISNSAYHGASMDKHHIALELERFLGAIQRNWGISRDAIAEEGVYFSHETCTHATPTASCAFNEVSALRQCFGEDLLSRLVIINTKACYLPAELRPGFTGHPMGVSFEDVAAVEALFRGVIPPTANSPSVDPALGKLRLSTGGVYPAKYAMRFAAGFGSQVAFALYAS 849 QDM+ GR ER+VV+AGD+ SG LLPW+G+GFRALGAA+ DAA PFD RR+GM++GAGGIGMVLETE C+ R LPP P N ++ARLL TQ SNSA+HGA++D+ HIA EL+RFL ++ GIS+ IA GVYFSHET THA+ ASCA NEV+ALR FG +LLS+L+I+NTK GFTGHPMGVSFEDVAAVE L R V+PP N D LG +++S GG Y +YA+RFAAGFGSQVAFALYAS Sbjct: 304 QDMLISGRAERVVVVAGDNGSGGTLLPWLGSGFRALGAATTKEAVEDAACPFDKRRSGMIIGAGGIGMVLETE-----TSCQQ---RMKLPPVPGCQPCN--------IRARLLATQYSNSAFHGAALDRKHIASELQRFLNDVELIHGISKAEIATHGVYFSHETSTHASAAASCAGNEVAALRSAFGNELLSKLLILNTK----------GFTGHPMGVSFEDVAAVEVLLRQVVPPMPNYKEKDDYLGDIKISKGGAYACRYALRFAAGFGSQVAFALYAS 561
BLAST of mRNA_L-elsbetiae_contig1300.2383.1 vs. uniprot
Match: A0A7S2LNP4_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LNP4_9STRA) HSP 1 Score: 297 bits (761), Expect = 1.160e-89 Identity = 166/285 (58.25%), Postives = 202/285 (70.88%), Query Frame = 1 Query: 1 QDMIQIGRCERMVVIAGDDASGEALLPWIGNGFRALGAASIAADPADAALPFDVRRNGMLLGAGGIGMVLETEGAAARRHCEAVGIRASLPPPANGDANGTAAGGGAMKARLLETQISNSAYHGASMDKHHIALELERFLGAIQRNWGISRDAIAEEGVYFSHETCTHATPTASCAFNEVSALRQCFGEDLLSRLVIINTKACYLPAELRPGFTGHPMGVSFEDVAAVEALFRGVIPPTANSPSVDPALGKLRLSTGGVYPAKYAMRFAAGFGSQVAFALYASVD 855 QDM+ GR ER+VV+AGD+ASGE LLPW+G+GFRALGAA+ A DAALPFD RR+GM+LGAGGIGMVLETE +A +A TA ++KARL+ TQ SNSAYHGA++D+ HI EL+RFL ++ GIS+ IA GVYFSHET THA+ ASCA NEV+ALR FG++LLS+L+I+NTK GFTGHPMGVSFEDV AV+ L +PP AN D LG+L+LS+GG YP +YA+RFAAGFGSQVAFALYA+ D Sbjct: 798 QDMLISGRAERVVVVAGDNASGETLLPWLGSGFRALGAATTKAAVEDAALPFDKRRSGMILGAGGIGMVLETESSA--------------------NARLTATADFSIKARLVATQYSNSAYHGAALDRKHIGSELQRFLTEVEFVHGISKSDIAANGVYFSHETFTHASDAASCAGNEVAALRTAFGDELLSKLMILNTK----------GFTGHPMGVSFEDVTAVQVLLSQTVPPIANYKEKDDYLGELKLSSGGSYPCRYALRFAAGFGSQVAFALYATAD 1052 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1300.2383.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1300.2383.1 >prot_L-elsbetiae_contig1300.2383.1 ID=prot_L-elsbetiae_contig1300.2383.1|Name=mRNA_L-elsbetiae_contig1300.2383.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=291bp MIQIGRCERMVVIAGDDASGEALLPWIGNGFRALGAASIAADPADAALPFback to top mRNA from alignment at L-elsbetiae_contig1300:20821..25808- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1300.2383.1 ID=mRNA_L-elsbetiae_contig1300.2383.1|Name=mRNA_L-elsbetiae_contig1300.2383.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4988bp|location=Sequence derived from alignment at L-elsbetiae_contig1300:20821..25808- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1300:20821..25808- >mRNA_L-elsbetiae_contig1300.2383.1 ID=mRNA_L-elsbetiae_contig1300.2383.1|Name=mRNA_L-elsbetiae_contig1300.2383.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1746bp|location=Sequence derived from alignment at L-elsbetiae_contig1300:20821..25808- (Laminarionema elsbetiae ELsaHSoW15)back to top |