mRNA_L-elsbetiae_contig1019.238.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1019.238.1 vs. uniprot
Match: D7FKJ3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKJ3_ECTSI) HSP 1 Score: 425 bits (1092), Expect = 3.840e-139 Identity = 220/272 (80.88%), Postives = 249/272 (91.54%), Query Frame = 1 Query: 181 RRTVVMNG--SLSRQELLKQAGAGLAALMAGAAVGAAPANAQTGTAVEVMRLRFGDKLRRASKMLDELQQDIANDDWDLVSTYPNAFRSLVPVFTKYTDAAFPTDDPVDTTSRVALRYEVGRFFGAVERLKRAAEEQNNREAQTAFAAMSVAYDRYLKAGNLYDGYDTVTSTEGFYAGVSNTNLKFVPPSKDPPKIQDNVLLLAGPDKGKTGYVIGMEGGSMASTKAIVKLETSSALGMREIKVVPLEYVAKTIEQQGMTN-KNNKRMRSVS 987 R TVVM+G S+SR + KQAG LAA+ G A GAAPA AQ G+AVEVMRLRFGDKLRRA+KMLDELQ DI+N DWDLV+TYPNAFR+LVPVFTKYTDAAFPTDDPVDTTSRVALRYEVGRF+GAVERLKRAAE+QN+REAQ+AFAAMSVAYDRYLKAGNLYDGYD+VTSTEGFYA VSN++LK+VPPSKDPPKI+DNVLL+AGPDKGKTG++IG+EGGS+++TKAIVKLETSSALGMREIKVVPL+YVAKT++QQGM N K K+MR S Sbjct: 77 RTTVVMDGGGSVSRLDFFKQAGLSLAAVAMGGATGAAPAKAQAGSAVEVMRLRFGDKLRRAAKMLDELQDDISNSDWDLVTTYPNAFRTLVPVFTKYTDAAFPTDDPVDTTSRVALRYEVGRFYGAVERLKRAAEQQNSREAQSAFAAMSVAYDRYLKAGNLYDGYDSVTSTEGFYADVSNSSLKYVPPSKDPPKIKDNVLLVAGPDKGKTGFMIGVEGGSLSATKAIVKLETSSALGMREIKVVPLDYVAKTVDQQGMFNSKTTKKMRPSS 348
BLAST of mRNA_L-elsbetiae_contig1019.238.1 vs. uniprot
Match: A0A7S3Y3I2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3I2_HETAK) HSP 1 Score: 246 bits (627), Expect = 3.510e-71 Identity = 142/243 (58.44%), Postives = 172/243 (70.78%), Query Frame = 1 Query: 241 AGLAALMAGAAV-GAAPANAQTGTAVEVMRLRFGDKLRRASKMLDELQQDIANDDWDLVSTYPNAFRSLVPVFTKYTDAAFPTDDPVDTTSRVALRYEVGRFFGAVERLKRAAEEQNNREAQTAFAAMSVAYDRYLKAGNLYDGYDTVTSTEGFYAGVSNTNLKFVPPSKDPPKIQDNVLLLAGPDKGKTGYVIGMEG--GSMASTK--AIVKLETS--SALGMREIKVVPLEYVAKTIEQQG 948 AG AAL GA + A PA A A E +GD+LRR ++ LDELQ+DI N+DW+ V+TYP FR+ VPVFT+YTDA F + D SRVALRYEVGR FGAVERLKRAAE+++ REAQ AFA +SVAYDRYLKAG LYD YD VTSTE F+A V ++ L+F PP+ DPPKI+D VLL AGPDKGKTG +IG+E GS K IVKL+ + +REIKVVP VAK ++ +G Sbjct: 55 AGAAALGLGAGLMDALPAAAAPAPAKEAALKGYGDRLRRIARTLDELQRDIFNEDWEFVATYPATFRAFVPVFTRYTDARFEGEGEADRQSRVALRYEVGRLFGAVERLKRAAEKKDPREAQAAFAQISVAYDRYLKAGYLYDAYDPVTSTEKFFADVPDSALRFAPPAADPPKIKDLVLLTAGPDKGKTGTLIGLEETLGSKGEKKKSGIVKLDNTIGRVSKIREIKVVPYAIVAKRLDTEG 297
BLAST of mRNA_L-elsbetiae_contig1019.238.1 vs. uniprot
Match: A0A0G4GSY0_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GSY0_VITBC) HSP 1 Score: 232 bits (591), Expect = 1.630e-65 Identity = 113/207 (54.59%), Postives = 157/207 (75.85%), Query Frame = 1 Query: 331 RFGDKLRRASKMLDELQQDIANDDWDLVSTYPNAFRSLVPVFTKYTDAAFPTDDPVDTTSRVALRYEVGRFFGAVERLKRAAEEQNNREAQTAFAAMSVAYDRYLKAGNLYDGYDTVTSTEGFYAGVSNTNLKFVPPSKDPPKIQDNVLLLAGPDKGKTGYVIGMEGGSMASTK--AIVKLETSSALGMREIKVVPLEYVAKTIEQQ 945 + ++R+ + +LDELQ DI ++DWD++++YP R+ VP+FTKYTD+AFP DPVD +R ALRYEVGR FG+VERLKRA ++++ RE + AFAAMSV++DRYLKAG+LY+ YD + STE F+ GV ++ L +VPP +DPPKI+D VLLL GPDKGKTG ++G+EG +A K +VKL+T +RE+KVVP ++AK +Q Sbjct: 107 KIAPRIRQIATVLDELQADIYDEDWDILASYPQQLRAYVPIFTKYTDSAFPGKDPVDENTRFALRYEVGRLFGSVERLKRAVDKKDVRETEEAFAAMSVSFDRYLKAGDLYEVYDPIISTEKFFEGVEDSQLVYVPPLRDPPKIRDQVLLLRGPDKGKTGILLGVEGDEVAKVKRKGVVKLDTKVG-SIRELKVVPYAFIAKRKGEQ 312
BLAST of mRNA_L-elsbetiae_contig1019.238.1 vs. uniprot
Match: A0A7S3Y3T3_HETAK (Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3T3_HETAK) HSP 1 Score: 241 bits (614), Expect = 2.700e-64 Identity = 129/211 (61.14%), Postives = 158/211 (74.88%), Query Frame = 1 Query: 334 FGDKLRRASKMLDELQQDIANDDWDLVSTYPNAFRSLVPVFTKYTDAAFPTDDPVDTTSRVALRYEVGRFFGAVERLKRAAEEQNNREAQTAFAAMSVAYDRYLKAGNLYDGYDTVTSTEGFYAGVSNTNLKFVPPSKDPPKIQDNVLLLAGPDKGKTGYVIGMEG--GSMASTK--AIVKLETS--SALGMREIKVVPLEYVAKTIEQQG 948 +GD+LRR ++ LDELQ+DI N+DW+ V+TYP FR+ VPVFT+YTDA F + D SRVALRYEVGR FGAVERLKRAAE+++ REAQ AFA +SVAYDRYLKAG LYD YD VTSTE F+A V ++ L+F PP+ DPPKI+D VLL AGPDKGKTG +IG+E GS K IVKL+ + +REIKVVP VAK ++ +G Sbjct: 596 YGDRLRRIARTLDELQRDIFNEDWEFVATYPATFRAFVPVFTRYTDARFEGEGEADRQSRVALRYEVGRLFGAVERLKRAAEKKDPREAQAAFAQISVAYDRYLKAGYLYDAYDPVTSTEKFFADVPDSALRFAPPAADPPKIKDLVLLTAGPDKGKTGTLIGLEETLGSKGEKKKSGIVKLDNTIGRVSKIREIKVVPYAIVAKRLDTEG 806
BLAST of mRNA_L-elsbetiae_contig1019.238.1 vs. uniprot
Match: A0A7R9UEJ4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UEJ4_9STRA) HSP 1 Score: 213 bits (543), Expect = 1.800e-60 Identity = 99/166 (59.64%), Postives = 132/166 (79.52%), Query Frame = 1 Query: 331 RFGDKLRRASKMLDELQQDIANDDWDLVSTYPNAFRSLVPVFTKYTDAAFPTDDPVDTTSRVALRYEVGRFFGAVERLKRAAEEQNNREAQTAFAAMSVAYDRYLKAGNLYDGYDTVTSTEGFYAGVSNTNLKFVPPSKDPPKIQDNVLLLAGPDKGKTGYVIGME 828 R G+K+RR +++LD+LQ+DI +DW +STYP RS VP+FTKYTD AFP++ +DT +R ALRYEVGRFFGAVERLKRA + ++ EA+ +FA +S+++DRYLKAGNLY+ YD + STE FY G+ + +L FVPPS + PK +D VLL+AGPDKGKTG +IG+E Sbjct: 39 RAGEKIRRIARILDDLQRDIFEEDWTFISTYPVELRSFVPIFTKYTDTAFPSESAIDTQTRFALRYEVGRFFGAVERLKRAVDSRDIGEAEASFAQISISFDRYLKAGNLYEQYDPIVSTEKFYEGIPDKDLVFVPPSAETPKTRDPVLLIAGPDKGKTGLLIGIE 204
BLAST of mRNA_L-elsbetiae_contig1019.238.1 vs. uniprot
Match: B8BUB6_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BUB6_THAPS) HSP 1 Score: 196 bits (498), Expect = 1.860e-52 Identity = 101/204 (49.51%), Postives = 135/204 (66.18%), Query Frame = 1 Query: 334 FGDKLRRASKMLDELQQDIANDDWDLVSTYPNAFRSLVPVFTKYTDAAFPTDDPVDTTSRVALRYEVGRFFGAVERLKRAAEEQNNREAQTAFAAMSVAYDRYLKAGNLYDGYDTVTSTEGFYAGVSNTNLKFVPPSKDPPKIQDNVLLLAGPDKGKTGYVIGMEGGSMASTKAIVKLETSSALGMREIKVVPLEYVAKTIEQQ 945 +K+R SK++DELQ+D+ + WDLV YPN RS VPVFT YTD+AFPTD P D RVALRYEVGRFF ++ERLK A ++ EA A++ MS+ +DRYL+ G LY YD S E ++ G TNL +V P KDP ++D ++L GPDKG+TG VIG+ S +VKL+ + G+REI+VVP + AK + +Q Sbjct: 132 LSNKIRGVSKVMDELQRDLMQERWDLVENYPNQLRSYVPVFTSYTDSAFPTDIPTDQGLRVALRYEVGRFFASLERLKTATSRRSINEAYVAYSDMSLHFDRYLRVGGLYTFYDDTVSLETYFQGTPETNLVYVDPKKDPALVRDLIVLREGPDKGRTGIVIGIY--PDGSNTCVVKLDRTR--GIREIRVVPCMWAAKRLGEQ 331
BLAST of mRNA_L-elsbetiae_contig1019.238.1 vs. uniprot
Match: B7FPD1_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FPD1_PHATC) HSP 1 Score: 191 bits (485), Expect = 6.470e-51 Identity = 104/223 (46.64%), Postives = 146/223 (65.47%), Query Frame = 1 Query: 286 PANAQTGTAVEVMRLRFG---DKLRRASKMLDELQQDIANDDWDLVSTYPNAFRSLVPVFTKYTDAAFPTDDPVDTTSRVALRYEVGRFFGAVERLKRAAEEQNNREAQTAFAAMSVAYDRYLKAGNLYDGYDTVTSTEGFYAGVSNTNLKFVPPSKDPPKIQDNVLLLAGPDKGKTGYVIGMEGGSMASTKAIVKLETSSALGMREIKVVPLEYVAKTIEQQ 945 P ++T TA + R G K+R ++DELQ+D+ + WDLV +YP RS VPVFT YTD+AFP+D P D RVALRYEVGRFF +VER K+AA Q EA A++ M++ +DRYL+ G LY YD STE ++ G+++ L + P DPP ++D V+L+ GP+KGKTG +IGM S + K+++KL+ GMREI+VV ++VAK + +Q Sbjct: 91 PDLSKTMTAQGPVNRRVGGLASKIRNIGSVMDELQRDLMQERWDLVESYPAQLRSFVPVFTTYTDSAFPSDAPTDKGLRVALRYEVGRFFASVERFKQAASRQALDEAYLAYSEMALHFDRYLRVGGLYTYYDDSISTEPYFQGIADDALVYSDPKTDPPFVRDLVILVRGPEKGKTGIIIGMY--SDGTNKSVIKLDRYK--GMREIRVVANDWVAKRLGEQ 309
BLAST of mRNA_L-elsbetiae_contig1019.238.1 vs. uniprot
Match: A0A7S3L2H9_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L2H9_9STRA) HSP 1 Score: 189 bits (479), Expect = 8.340e-51 Identity = 100/201 (49.75%), Postives = 131/201 (65.17%), Query Frame = 1 Query: 343 KLRRASKMLDELQQDIANDDWDLVSTYPNAFRSLVPVFTKYTDAAFPTDDPVDTTSRVALRYEVGRFFGAVERLKRAAEEQNNREAQTAFAAMSVAYDRYLKAGNLYDGYDTVTSTEGFYAGVSNTNLKFVPPSKDPPKIQDNVLLLAGPDKGKTGYVIGMEGGSMASTKAIVKLETSSALGMREIKVVPLEYVAKTIEQQ 945 K+R ++DELQ+D+ + WDLV YP RS VPVFT YTD AFP+D P D RVALRYEVGR F +VER A+ Q+ EA A+A M++ +DRYL+ G LY YD S E ++ GVS+T L F P KDPP ++D ++L++GPDKGKTG V+ S K +VKL+ GMREI+VVP +VAK + +Q Sbjct: 54 KIRTVGNIMDELQRDLMQERWDLVGGYPAQLRSYVPVFTTYTDTAFPSDAPTDKGLRVALRYEVGRLFASVERFNLASSRQSLDEAYLAYADMALHFDRYLRVGGLYSYYDDTISNEPYFKGVSDTALVFADPIKDPPLVRDLIVLVSGPDKGKTGIVLAQY--RDGSNKTVVKLDRFK--GMREIEVVPNAWVAKRLGEQ 250
BLAST of mRNA_L-elsbetiae_contig1019.238.1 vs. uniprot
Match: A0A7S2IJZ6_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IJZ6_9STRA) HSP 1 Score: 189 bits (481), Expect = 2.130e-50 Identity = 98/202 (48.51%), Postives = 136/202 (67.33%), Query Frame = 1 Query: 340 DKLRRASKMLDELQQDIANDDWDLVSTYPNAFRSLVPVFTKYTDAAFPTDDPVDTTSRVALRYEVGRFFGAVERLKRAAEEQNNREAQTAFAAMSVAYDRYLKAGNLYDGYDTVTSTEGFYAGVSNTNLKFVPPSKDPPKIQDNVLLLAGPDKGKTGYVIGMEGGSMASTKAIVKLETSSALGMREIKVVPLEYVAKTIEQQ 945 +K+R ++++DELQ+D+ + WDLV YP RS VPVFT YTD+AFP+D+P D RVALRYEVGRFF ++ERL++A ++ EA TAFA MS+ +DRYL+ G LY YD+ +TE + +S+ L F P KDPP ++D ++L GPDKGKTG VIG+ + +VKL+ MREI+VVPL + K + +Q Sbjct: 109 NKIRGVARVMDELQRDLMQERWDLVEKYPPQIRSYVPVFTTYTDSAFPSDEPTDQGLRVALRYEVGRFFASLERLRQATSRRSLDEAYTAFADMSLHFDRYLRVGGLYTYYDSTITTEPLFKNISDDALVFSDPKKDPPAVRDLIVLTKGPDKGKTGIVIGIYPDGKGT--CVVKLDRYK--DMREIRVVPLLWAGKRLGEQ 306
BLAST of mRNA_L-elsbetiae_contig1019.238.1 vs. uniprot
Match: A0A7S4RLA6_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RLA6_9STRA) HSP 1 Score: 188 bits (478), Expect = 5.400e-50 Identity = 97/201 (48.26%), Postives = 136/201 (67.66%), Query Frame = 1 Query: 343 KLRRASKMLDELQQDIANDDWDLVSTYPNAFRSLVPVFTKYTDAAFPTDDPVDTTSRVALRYEVGRFFGAVERLKRAAEEQNNREAQTAFAAMSVAYDRYLKAGNLYDGYDTVTSTEGFYAGVSNTNLKFVPPSKDPPKIQDNVLLLAGPDKGKTGYVIGMEGGSMASTKAIVKLETSSALGMREIKVVPLEYVAKTIEQQ 945 K+R ++DELQ+D+ + WDLV YP FRS VPVFT YTD+AFP+D+P D RVALRYEVGRFF ++ERL++A ++ EA TA+A MS+ +DRYL+ G LY YD++ STE + + + L F P KDPP+++D V++ GPDKGK G VIG+ + +VKL+ G+REI+V+PL +V K + +Q Sbjct: 109 KIRGVVGIMDELQRDLMQERWDLVEKYPGQFRSYVPVFTTYTDSAFPSDEPTDQGLRVALRYEVGRFFASLERLRQATTRRSLNEAYTAYADMSLHFDRYLRVGGLYTYYDSLISTEPLFTNIPDNALIFSDPKKDPPEVRDLVVVTKGPDKGKIGIVIGIYPDGKGN--CVVKLDRYK--GLREIRVLPLLWVGKRLGEQ 305 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1019.238.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1019.238.1 >prot_L-elsbetiae_contig1019.238.1 ID=prot_L-elsbetiae_contig1019.238.1|Name=mRNA_L-elsbetiae_contig1019.238.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=265bp MNGSLSRQELLKQAGAGLAALMAGAAVGAAPANAQTGTAVEVMRLRFGDKback to top mRNA from alignment at L-elsbetiae_contig1019:20423..27968+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1019.238.1 ID=mRNA_L-elsbetiae_contig1019.238.1|Name=mRNA_L-elsbetiae_contig1019.238.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7546bp|location=Sequence derived from alignment at L-elsbetiae_contig1019:20423..27968+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1019:20423..27968+ >mRNA_L-elsbetiae_contig1019.238.1 ID=mRNA_L-elsbetiae_contig1019.238.1|Name=mRNA_L-elsbetiae_contig1019.238.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1590bp|location=Sequence derived from alignment at L-elsbetiae_contig1019:20423..27968+ (Laminarionema elsbetiae ELsaHSoW15)back to top |