mRNA_L-elsbetiae_contig13.2372.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig13.2372.1
Unique NamemRNA_L-elsbetiae_contig13.2372.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig13.2372.1 vs. uniprot
Match: D7FPT2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPT2_ECTSI)

HSP 1 Score: 364 bits (934), Expect = 7.400e-123
Identity = 181/228 (79.39%), Postives = 199/228 (87.28%), Query Frame = 1
Query:  205 SMSTASEMGASPRWEGHWSAGLNKGDMWDAGVVSPALQELLDEAGVLPKGRSLVPGCGRGYDAIAFGKSGYDSTGLDLSPTGVEQAKALLAEQKEEEISGK-----------VQFRSGDFFKFSPEEEGKFDVVLDYTFLCALDPAARENWATHMVSLLSPEGELVTLIFPIVEKEGGPPFAVSESIVSSLLEPRGLKAVHLENLPPSLCHEGREGKTALGRWRFSSS 855
            SM+  SE+ ASP WEG+WS G++KGD WD GVVSPALQ+LLDE GVLP GR+LVPGCGRGYD+IAFGKS YDS GLDLSPTGVEQAKALLAE+KEE+ISGK           V+FRSGDFFKFSPE+EGKFDV+LDYTFLCALDPAAR++WA HMVSLL PEGELVT+IFPIVEKEGGPPFAVSESIVS LLEPRGLKA+HLE L PSLCH+ REGKTALGRWRFS S
Sbjct:    2 SMTDPSEVRASPAWEGYWSGGISKGDQWDTGVVSPALQKLLDE-GVLPTGRALVPGCGRGYDSIAFGKSSYDSIGLDLSPTGVEQAKALLAEEKEEDISGKARQELGKPLSVVEFRSGDFFKFSPEQEGKFDVILDYTFLCALDPAARDDWADHMVSLLRPEGELVTIIFPIVEKEGGPPFAVSESIVSDLLEPRGLKAIHLEKLEPSLCHKTREGKTALGRWRFSGS 228          
BLAST of mRNA_L-elsbetiae_contig13.2372.1 vs. uniprot
Match: A0A836CD04_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD04_9STRA)

HSP 1 Score: 246 bits (627), Expect = 1.580e-76
Identity = 131/222 (59.01%), Postives = 161/222 (72.52%), Query Frame = 1
Query:  199 KSSMSTASEMGASPRWEGHWSAGLNKGDMWDAGVVSPALQELLDEAGVLPKGRSLVPGCGRGYDAIAFGKSGYDSTGLDLSPTGVEQAKALLAEQKEEEISGKVQFRSGDFFKFSPEEEG-KFDVVLDYTFLCALDPAARENWATHMVSLLSPEGELVTLIFPIVE--KEGGPPFAVSESIVSSLLEPRGLKAVH-LENLPPSLCHEGREGKTALGRWRFSS 852
            +   ST  +    PRWE  W+AGL KGD +D G VSPALQ+LLD A  LPKGR+LVPGCGRGYDAIAFG +GYD+TGLDLS TG++ A ALLAE  E + +G VQF  G+FF+F  +  G +FDV+LDYTFLCALDP+ R+ WA  M +LL+P GELVTLIFPI +   EGGPPF V+  +++ LL P GL+AV  L+ LP  LCH  RE +T LGRWR  +
Sbjct:    4 EQDQSTPQQEQGHPRWENIWAAGLKKGDAFDTGRVSPALQQLLD-AQALPKGRALVPGCGRGYDAIAFGAAGYDATGLDLSKTGIQAATALLAET-EPKPAGPVQFVVGNFFEFGGDGSGGRFDVILDYTFLCALDPSIRQQWAQRMAALLAPGGELVTLIFPIGKPLSEGGPPFGVTLDLLTELLTPVGLEAVEELKMLPDELCHPTREKRTGLGRWRLKA 223          
BLAST of mRNA_L-elsbetiae_contig13.2372.1 vs. uniprot
Match: F2TX11_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2TX11_SALR5)

HSP 1 Score: 212 bits (540), Expect = 2.710e-63
Identity = 108/204 (52.94%), Postives = 137/204 (67.16%), Query Frame = 1
Query:  229 GASPRWEGHWSAGLNKGDMWDAGVVSPALQELLDEAGVLPKGRSLVPGCGRGYDAIAFGKSGYDSTGLDLSPTGVEQAKALLAEQKEEEISGKVQFRSGDFFKFSPEEEGKFDVVLDYTFLCALDPAARENWATHMVSLLSPEGELVTLIFPIVEKEGGPPFAVSESIVSSLLEPRGLKAVHLENLPPSLCHEGREGKTALGRW 840
            G S  WE  W+ GL  G  +DA   +P L+ LLD    LPKGR+LVPGCGR Y  + F + GY + G+DL+ T V+ A+  +   +++   G ++ R+ +FF    E EG+FDV+ DYTFLCAL P ARE WA  M  LL+P+GELVTLIFPIVEKEGGPP+A+S  +V SLLEP G  A  LE LP  +CH GRE +TALGRW
Sbjct:   35 GVSETWEQIWADGLEPGQRFDARGPAPILKHLLD-TNALPKGRALVPGCGRAYAPLEFARHGYQTLGVDLAHTAVKAAQEFVDSVEDKPKEGLLELRAANFF----ELEGQFDVIYDYTFLCALHPNAREKWAAQMHKLLAPQGELVTLIFPIVEKEGGPPYAMSMDLVKSLLEPLGFTATTLEMLPDDMCHRGREERTALGRW 233          
BLAST of mRNA_L-elsbetiae_contig13.2372.1 vs. uniprot
Match: A0A6S9GED5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9GED5_HETAK)

HSP 1 Score: 195 bits (496), Expect = 2.280e-56
Identity = 108/220 (49.09%), Postives = 135/220 (61.36%), Query Frame = 1
Query:  241 RWEGHWSAGLNKGDMWDAGVVSPALQELLDEAGVLPKGRS-----LVPGCGRGYDAIAFGKSGYDSTGLDLSPTGVEQAKALLAEQKE-EEISGKVQFRSGDFFKFSPEEEGKFDVVLDYTFLCALDPAARENWATHMVSLLSPEGELVTLIFPIVEKEGGPPFAVSESIVSSLLEPRGLKAVH-LENLPPSLCHEGREG--------KTALGRWRFSSS 855
            +WEG W+ G+ KGD +D G   PAL EL+ +  +LPK  +      VPGCGRGYDA+A  ++GY   GLDL+PT VE A   L E    +   G   F  GDFF  S     +FDV+ DYTFLCAL P  R+ WA  M S L P GEL+TLIFPI EKEGGPP+A+S  +V  L E  GL+AV  +  LPP LC+ GR+G         +ALGRWR ++S
Sbjct:   46 KWEGMWANGIGKGDAFDCGTGCPALAELIQQQ-ILPKSENGLSTAFVPGCGRGYDAVALAEAGYTVLGLDLAPTAVEAANRYLEEMNGIQNPEGACSFEEGDFFGVSQ----RFDVIFDYTFLCALPPELRKPWAEKMKSSLKPGGELITLIFPICEKEGGPPYAMSVELVRDLCEGAGLEAVGPVGLLPPELCNRGRDGGPGSMFGASSALGRWRLAAS 260          
BLAST of mRNA_L-elsbetiae_contig13.2372.1 vs. uniprot
Match: A9V7J4_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V7J4_MONBE)

HSP 1 Score: 188 bits (478), Expect = 6.880e-55
Identity = 96/171 (56.14%), Postives = 115/171 (67.25%), Query Frame = 1
Query:  337 GVLPKGRSLVPGCGRGYDAIAFGKSGYDSTGLDLSPTGVEQAKALLAEQKEEEISGKVQFRSGDFFKFSPEEEGKFDVVLDYTFLCALDPAARENWATHMVSLLSPEGELVTLIFPIVEKEGGPPFAVSESIVSSLLEPRGLKAVHLENLPPSLCHEGREGKTALGRWRFS 849
            GVLPKGR+LVPGCGR Y  +AF + GY +TGLDLS T VE+A+ +L E +   + G+     G+FF    E  G FDV+ DYTFLCAL P AR  WA     LL+P G L T+I+PI EK GGPPF +S  +V SLLEP G KA  LE LP  LCH GREGKTA+G W+ S
Sbjct:    7 GVLPKGRALVPGCGRAYAVVAFAQHGYTATGLDLSETAVEEAQQVLEENRAS-LQGEATVALGNFF----ETTGTFDVIYDYTFLCALHPDARAAWAQQHKKLLAPGGTLFTMIYPITEKTGGPPFQMSIELVQSLLEPLGFKASRLEMLPDELCHPGREGKTAIGLWQLS 172          
BLAST of mRNA_L-elsbetiae_contig13.2372.1 vs. uniprot
Match: L1IP07_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IP07_GUITC)

HSP 1 Score: 177 bits (449), Expect = 2.130e-49
Identity = 100/213 (46.95%), Postives = 129/213 (60.56%), Query Frame = 1
Query:  244 WEGHWS--AGLNKGDMWDAGVVSPALQELLDEAGVL------PKGRSLVPGCGRGYDAIAFGKSGYDSTGLDLSPTGVEQAKALL-AEQKEEEIS---GKVQFRSGDFFKFSPEEEGKFDVVLDYTFLCALDPAARENWATHMVSLLSPEGELVTLIFPIVEKEGGPPFAVSESIVSSLLEPRGLKAVHLENLPPSLCHEGREGKTALGRWRF 846
            W+  W    GL  G  +DA   SP L EL+ E  V        K  +LVPGCGRGYD   F K G++  GLD+SPT V+ A+    +E K   +S   G  +F + DFF     E  KFDV+ DYTFLCA++P  R++WA  M  LL P GELVTLIFP+  +EGGPP+A+S  +V++LLEP G    +LE++P    H+GR GK ALGRWR 
Sbjct:   52 WDDMWKRDGGLKPGQYFDACKSSPVLLELIQEWKVKYADYSNGKPDALVPGCGRGYDVCEFAKIGFNGLGLDISPTAVKAAEEFNESELKSAGVSAWKGDAKFSTDDFFTL---EGRKFDVIYDYTFLCAIEPNMRKSWAEKMKQLLKPGGELVTLIFPLETREGGPPYAMSIDLVTNLLEPEGFVCDYLESVPEGKSHKGRGGKEALGRWRL 261          
BLAST of mRNA_L-elsbetiae_contig13.2372.1 vs. uniprot
Match: A0A7S1HEK2_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HEK2_HEMAN)

HSP 1 Score: 177 bits (448), Expect = 2.590e-49
Identity = 102/259 (39.38%), Postives = 143/259 (55.21%), Query Frame = 1
Query:   79 PSLSKACLLILSLPHQPVRSLLVGLNAIAPPHSHGIPFFHKSSMSTASEMGASPRWEGHWSAGLNKGDMWDAGVVSPALQELL---DEAGVLPKGRSLVPGCGRGYDAIAFGKSGYDSTGLDLSPTGVEQAKALLAEQKEEEISGKVQFRSGDFFKFSPEEEGKFDVVLDYTFLCALDPAARENWATHMVSLLSPEGELVTLIFPIVEKE-GGPPFAVSESIVSSLLEPRGLKAVHLENLPPSLCHEGREGKTALGRWR 843
            P+  +  +L + L HQ  R+LLV      P  +H       ++ +T S       WEG W+AGL  GD +D    S +  ++L    +     K R+L+PGCGRGYD +   +  +D+ GLD+SPT V+ A+A    Q E  + G+ +F + DFF     E G FD+V DYTFLCA+DP+ R  WA     L+ P GELVTLI+PI  K+  GPP+A+   +V  LLEP+G     +  +P +  H GREG   L RWR
Sbjct:    2 PAAHRLIVLTVLLSHQTARALLVSWGP--PIKAHTRCASSSAATATMSSKEEQSMWEGMWAAGLKPGDRFDKSKSSQSFLDVLASWQDTAKAKKVRALIPGCGRGYDVVEAARFNFDALGLDISPTAVQAAQAYRDSQGE--LGGRAEFSTTDFFTLP--EPGAFDLVFDYTFLCAIDPSTRSAWAETHKRLIKPGGELVTLIYPIRPKDDNGPPYAMDTELVRGLLEPQGFVCESMVPVPHAKSHPGREGMEVLARWR 254          
BLAST of mRNA_L-elsbetiae_contig13.2372.1 vs. uniprot
Match: A9V8N0_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V8N0_MONBE)

HSP 1 Score: 171 bits (433), Expect = 3.010e-47
Identity = 94/215 (43.72%), Postives = 130/215 (60.47%), Query Frame = 1
Query:  217 ASEMGASPRWEGHWSAGLNKGDMWDAGVVSPALQELL--DEAGVLPKGRSLVPGCGRGYDAIAFGKSGYDSTGLDLSPTGVEQAKALLAEQK----EEEISGKVQFRSGDFFKFSPEEEGKFDVVLDYTFLCALDPAARENWATHMVSLLSPEGELVTLIFPIVEKEGGPPFAVSESIVSSLLEPRGLKAVHLENLPPSLCHEGREGKTALGRWR 843
            A+  G S  WE  W  G+     +DAG   PAL+ LL  D+    P+ R+LVPGCGRGYD     + G+   G +LS T  + A+  +  Q+    +  ++G +     DFF+  P  + ++D++ DYTFLCAL P + + WA  M +LL P G LVT+IFPIV+KEGGPPFA+S  +VS LL+ +  +  HL  LP S C++GREG TALG WR
Sbjct:   29 ATRHGRSSHWETVWQEGVRPLGKFDAGGPCPALEILLAQDDVPRHPEARALVPGCGRGYDLPVLARHGFHVEGWELSETAAQVARDYINSQEHATPDAPLTGTMSVARMDFFE--PTSDQQYDLIYDYTFLCALHPDSHQAWARQMRALLRPGGLLVTVIFPIVDKEGGPPFAMSMELVSGLLQGQNFECQHLAMLPDSSCNKGREGITALGLWR 241          
BLAST of mRNA_L-elsbetiae_contig13.2372.1 vs. uniprot
Match: A0A812Q7L8_9DINO (HOL3 protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812Q7L8_9DINO)

HSP 1 Score: 171 bits (432), Expect = 4.110e-47
Identity = 100/211 (47.39%), Postives = 125/211 (59.24%), Query Frame = 1
Query:  223 EMGASPRWEGHWSAGLNKGDMWDAGVVSPALQELL--DEAGVLPKGRSLVPGCGRGYDAIAFGKSGYDST-GLDLSPTGVEQAKALLAEQKEEEISGKVQFRSGDFFKFSPEEEGKFDVVLDYTFLCALDPAARENWATHMVSLLSPEGELVTLIFPIVEKEGGPPFAVSESIVSSLLEPRGLKAVHL-ENLPPSLCHEGR-EGKTALGRW 840
            + GASP WE  W+ GL   + +D G  SP L E+L     G     R+LVPGCGR YDAIA  + G+DS   +DL+PT V+ A+  L        S K++    DFFKF  E E K DV+ D TFLCALDP+ R +WA  M +LL+P G L+T IFPI EKEGGPPFA+S  +V  LLEP G +A  + E+        G     TALGRW
Sbjct:   34 DAGASPMWESMWARGLRPKEAFDCGEASPTLTEVLRLKSLGDCTGKRALVPGCGRAYDAIALAEYGFDSVVAIDLAPTAVDAARDFLKASSSPAAS-KIEVACADFFKF--ELEPKVDVIWDCTFLCALDPSVRTDWAKKMKALLNPGGTLLTCIFPICEKEGGPPFAMSVPLVRGLLEPEGFEAAEVREDAQKHTAGGGAFSANTALGRW 241          
BLAST of mRNA_L-elsbetiae_contig13.2372.1 vs. uniprot
Match: A0A7S0HD03_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HD03_9CRYP)

HSP 1 Score: 170 bits (430), Expect = 1.900e-46
Identity = 96/215 (44.65%), Postives = 127/215 (59.07%), Query Frame = 1
Query:  244 WEGHWS--AGLNKGDMWDAGVVSPALQELLDEAGV--------LPKGRSLVPGCGRGYDAIAFGKSGYDSTGLDLSPTGVEQAKALL-AEQKEEEIS---GKVQFRSGDFFKFSPEEEGKFDVVLDYTFLCALDPAARENWATHMVSLLSPEGELVTLIFPIVEKEGGPPFAVSESIVSSLLEPRGLKAVHLENLPPSLCHEGREGKTALGRWRF 846
            WE  W    GL  G  +DA   S  L +L+ E  V        +P   +LVPGCGRGYD   F K G+++ GLD+S T V+ A+    +E K   +S   G  +F + DFF     E  KFD++ DYTFLCA++P+ R+ W T M  LL P GEL+TLIFPI  +EGGPP+A+S  +V +LLEP G    +LE +P    H+GR GK ALGRW+ 
Sbjct:   64 WEDMWKRDGGLKPGQYFDACKSSRVLLDLIQEWKVKYGDQNEGMPD--ALVPGCGRGYDVSEFAKIGFNALGLDISQTAVKAAEEYNESEMKRSGVSAWKGSAKFSTDDFFTL---EGRKFDIIYDYTFLCAIEPSMRKPWVTRMKKLLKPGGELITLIFPIESREGGPPYAMSIDLVKNLLEPEGFVCEYLEPVPEEKSHKGRGGKEALGRWKL 273          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13.2372.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPT2_ECTSI7.400e-12379.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CD04_9STRA1.580e-7659.01S-adenosyl-L-methionine-dependent methyltransferas... [more]
F2TX11_SALR52.710e-6352.94Uncharacterized protein n=1 Tax=Salpingoeca rosett... [more]
A0A6S9GED5_HETAK2.280e-5649.09Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A9V7J4_MONBE6.880e-5556.14Predicted protein n=1 Tax=Monosiga brevicollis Tax... [more]
L1IP07_GUITC2.130e-4946.95Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A7S1HEK2_HEMAN2.590e-4939.38Hypothetical protein n=2 Tax=Hemiselmis andersenii... [more]
A9V8N0_MONBE3.010e-4743.72Predicted protein n=1 Tax=Monosiga brevicollis Tax... [more]
A0A812Q7L8_9DINO4.110e-4747.39HOL3 protein n=2 Tax=Symbiodinium TaxID=2949 RepID... [more]
A0A7S0HD03_9CRYP1.900e-4644.65Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13contigL-elsbetiae_contig13:24672..27536 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score365.9
Seed ortholog evalue1.6e-98
Seed eggNOG ortholog2880.D7FPT2
KEGG koko:K21552
Hectar predicted targeting categorysignal peptide
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006082,GO:0006790,GO:0006807,GO:0006950,GO:0006952,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008757,GO:0009056,GO:0009507,GO:0009526,GO:0009536,GO:0009941,GO:0009987,GO:0016020,GO:0016143,GO:0016145,GO:0016740,GO:0016741,GO:0018708,GO:0019748,GO:0019757,GO:0019759,GO:0019760,GO:0019762,GO:0031967,GO:0031975,GO:0032259,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044248,GO:0044273,GO:0044281,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0050896,GO:0071704,GO:0071944,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575,GO:1901657,GO:1901658
EggNOG free text desc.Thiol methyltransferase
EggNOG OGs28JNP@1,2QS1V@2759
EC2.1.1.165
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Ec32 ortholog descriptionS-adenosyl-L-methionine-dependent methyltransferase
Ec32 orthologEc-18_001620.1
Exons5
Model size1233
Cds size795
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815480.5900006-UTR-L-elsbetiae_contig13:24671..250431622815480.5900006-UTR-L-elsbetiae_contig13:24671..25043Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig13 24672..25043 -
1691682918.7558386-UTR-L-elsbetiae_contig13:24671..250431691682918.7558386-UTR-L-elsbetiae_contig13:24671..25043Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig13 24672..25043 -
1622815480.8663604-UTR-L-elsbetiae_contig13:27470..275361622815480.8663604-UTR-L-elsbetiae_contig13:27470..27536Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig13 27471..27536 -
1691682918.8105166-UTR-L-elsbetiae_contig13:27470..275361691682918.8105166-UTR-L-elsbetiae_contig13:27470..27536Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig13 27471..27536 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815480.6030817-CDS-L-elsbetiae_contig13:25043..252081622815480.6030817-CDS-L-elsbetiae_contig13:25043..25208Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13 25044..25208 -
1691682918.7668636-CDS-L-elsbetiae_contig13:25043..252081691682918.7668636-CDS-L-elsbetiae_contig13:25043..25208Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13 25044..25208 -
1622815480.7481065-CDS-L-elsbetiae_contig13:25537..256401622815480.7481065-CDS-L-elsbetiae_contig13:25537..25640Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13 25538..25640 -
1691682918.774894-CDS-L-elsbetiae_contig13:25537..256401691682918.774894-CDS-L-elsbetiae_contig13:25537..25640Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13 25538..25640 -
1622815480.826244-CDS-L-elsbetiae_contig13:26051..261371622815480.826244-CDS-L-elsbetiae_contig13:26051..26137Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13 26052..26137 -
1691682918.7833173-CDS-L-elsbetiae_contig13:26051..261371691682918.7833173-CDS-L-elsbetiae_contig13:26051..26137Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13 26052..26137 -
1622815480.8438299-CDS-L-elsbetiae_contig13:26607..267801622815480.8438299-CDS-L-elsbetiae_contig13:26607..26780Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13 26608..26780 -
1691682918.7940943-CDS-L-elsbetiae_contig13:26607..267801691682918.7940943-CDS-L-elsbetiae_contig13:26607..26780Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13 26608..26780 -
1622815480.8560212-CDS-L-elsbetiae_contig13:27202..274701622815480.8560212-CDS-L-elsbetiae_contig13:27202..27470Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13 27203..27470 -
1691682918.8022702-CDS-L-elsbetiae_contig13:27202..274701691682918.8022702-CDS-L-elsbetiae_contig13:27202..27470Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13 27203..27470 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13.2372.1prot_L-elsbetiae_contig13.2372.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig13 25044..27470 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig13.2372.1

>prot_L-elsbetiae_contig13.2372.1 ID=prot_L-elsbetiae_contig13.2372.1|Name=mRNA_L-elsbetiae_contig13.2372.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=265bp
MCPSPSLSKACLLILSLPHQPVRSLLVGLNAIAPPHSHGIPFFHKSSMST
ASEMGASPRWEGHWSAGLNKGDMWDAGVVSPALQELLDEAGVLPKGRSLV
PGCGRGYDAIAFGKSGYDSTGLDLSPTGVEQAKALLAEQKEEEISGKVQF
RSGDFFKFSPEEEGKFDVVLDYTFLCALDPAARENWATHMVSLLSPEGEL
VTLIFPIVEKEGGPPFAVSESIVSSLLEPRGLKAVHLENLPPSLCHEGRE
GKTALGRWRFSSSA*
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mRNA from alignment at L-elsbetiae_contig13:24672..27536-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig13.2372.1 ID=mRNA_L-elsbetiae_contig13.2372.1|Name=mRNA_L-elsbetiae_contig13.2372.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2865bp|location=Sequence derived from alignment at L-elsbetiae_contig13:24672..27536- (Laminarionema elsbetiae ELsaHSoW15)
GAAGCCAGTGGCGGAGTATGGAGTACGCGTCACCGCGTGCGCCCTACACT CGCCTCTAACAACCGCATGTGTCCGAGCCCCTCTCTCTCCAAAGCCTGTC TACTTATTTTGAGTCTCCCACATCAGCCAGTCCGATCGCTCCTCGTAGGC CTCAACGCCATCGCTCCTCCCCATTCTCACGGAATACCCTTCTTCCACAA AAGCAGCATGAGTACTGCCTCGGAAATGGGCGCGTCTCCTCGTTGGGAAG GCCACTGGTCCGCTGGGCTTAACAAGGGTGATATGTGGGACGCCGGTGTT GTGTCACCTGCCCTACAAGAACTTCTCGATGAAGGTGTGAAAGGACGGAC TTTTCTGGGTCTGTGATGGGTGTTGGATGTAAAGAGAGACTTTCTTTTTC GCCCCTGCATGGGGACTTCCCGAAGAAGACAGCATGTCAACGTAGACGTG CAACTGCGGGCTCCTATTGCCAAGACTGATGCTTGTGTGGAATGAGGTCC GAGGAAAACTATCGGCGGCGTTGGTTGCGTTGATGCCCGTGTACATACGC CCCCCGCGATTCCGCGCATGGCCCAGTCCACATCGGCAAGGGGTTGTGAG GCTGGTGGGTGACCGATAGGCCGTACACATACCGCATATACCATACCCCC GCGCTCTCTGGCTTTTGATATGTATTGAATGGACTATGAAGTGCCATGTC ATTCCCTTCACTACCACGATGCACCGCCTATTCGGACGCCATGGTGATCT TATAAGCAGGTGTGCTCCCAAAGGGTCGCTCCCTAGTTCCCGGTTGTGGT CGTGGGTACGATGCCATCGCCTTCGGCAAGAGCGGCTACGACTCGACAGG TCTTGACTTGTCACCGACCGGGGTGGAGCAAGCGAAAGCTCTGCTTGCAG AGCAAAAAGAAGAGGAAATTAGTGGAAAGGTGAAGCAGATGAAATGCTTG CATAGGTCGGAGGAAAGTTAGTGCCTACATACGTAGGACGAGGGGCCCTT CCGATAAGGCAGTATCGAGGATTTTCAAGTTGTACACGAAGATACGCATA CCGTCAGCAACACTCGCACGCGCGACGTCCATGATCTGGCAAGCACACGT TATATTTTGCTCGATCATCATTTTTGAGGTCAGAACACATCCGTCTAACC AACCGCCAGAGAGAGGATTCCGATATTTGTTATTGTAAATATACCAGCAC TATGCTGTTCACACAATGTGAGCGCACACGAATGGCATCGGTGCATCTAT AATGCTCAAGCTGTGTAGAGCGCAGGGGGCCTTGATTATCTTGGTACCGC TGCTGATGTGCTGGTGGAACTGACAAGCTTGCAGACGCTTCAAGAAAGAA CAGACGGAGCCCAAATCGCATGTTTCATTTTCTTGATCTGGGTCCTCAGG TGCAATTCCGGTCCGGCGACTTTTTCAAGTTTTCTCCAGAGGAAGAGGGA AAGTTCGACGTGGTCTTGGACTACACGTTTCTCTGGTAAGGGACTGAGTG GGTACCACCCTACCTGCCGCCTGCCGGCCTGCCGGGCACGTTAATCGCAT GCTAGGAAGAGGCTGTTCAACCAGCAGAACAAGCCCCGCATTGTAGCCGG CGACAGAATCGGCGCATCTGCTGCCGCCTACCTCTCCGGGTGATACCAAA TATGAAATGTAATGATTTTTTCGTCAGGCTACTCGCAGTTTACTGCACAA CTGCACCAGCCGGGAGGTATCGGTCGTCCATTCCCCTCAATAAACCGTCC ACCCTTCTGCAACAACCCTTCCTACCAGGCGGTACATATCATGTTCCCTG CTGTTTTTCGCTTTACATGTACATCACCGTTTTATCCCGCTCGTTGCGAG ATGTTTTGCCTCGATCCCTACTCCTGTTTCTTGCTGGTTTTGGCAGCGCG CTTGATCCGGCCGCACGCGAAAATTGGGCCACCCACATGGTGTCACTGCT GAGTCCCGAGGGGGAGCTAGTGACCCTCATATTCCCGATCGTGGAAAAGG TGCGACAAAATCGCGCCTAGGTTGCCGCCAACGTGCACGTCTTTTCCTGA GCCTATCAAAAGTCGTGCGTCCCCGTCTATACCCCAACAGGTTGGTGTCT GGCACTTAAAAATGCGTCTTGCTTGTTTTTCAGTCGTCCAGCACTGGTGC ACCGCGGGGGGTCTACTCGCACGTGGGTTATCATCCAGGACCACGAACCC AACCACAAGCAGACCGTACCGTCGTACGTTGTTCGTGTTTTCCTTTCGAA CACATGCACTCAATAATTTCGCCGACGACTAAACTCGTCCCTATACCTGC TTTCATGACTTCCTGATGGAACAAGCAGGAGGGGGGACCGCCATTCGCTG TGAGCGAGTCGATCGTCTCGAGCCTTCTGGAACCGCGGGGGCTCAAGGCC GTGCACCTCGAAAATCTCCCGCCAAGCCTTTGCCACGAGGGGAGGGAGGG GAAGACCGCTCTCGGGCGCTGGCGCTTTTCCAGCTCGGCGTGATGCTCGC CCGTTTGTTTTATGGTTGCCACTGCTGCCTGTTGTGATGAGTTCGTGCAA GGTATATGTAGGGCATCGTTGGGCACCTTGAAGACCCTCAGGGGGGATAA CAGTAGCCTTAAGGCTTGTAACGGAGGCGAAGCAGGGATTTGCCAAGCCA GGGGATATAGACTATATCCTCCCGAGAGAAGGGGCAGAATCAGGCTAGAC GCCCGGGAACTCATGGTGTAGGAGGGACGAACGGGAGGTGCAGACCTGTA TCTTGCACAACGTGCGCCTGTCGCCCGCCACTCAGTTTGTCTCAAGTGGT CTACGCCAAGAACCTTATCTCCAAACTGGGATGGAAAGATAAATAAAGCA CCGAAATCATGTCTG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig13:24672..27536-

>mRNA_L-elsbetiae_contig13.2372.1 ID=mRNA_L-elsbetiae_contig13.2372.1|Name=mRNA_L-elsbetiae_contig13.2372.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1590bp|location=Sequence derived from alignment at L-elsbetiae_contig13:24672..27536- (Laminarionema elsbetiae ELsaHSoW15)
ATGTGTCCGAGCCCCTCTCTCTCCAAAGCCTGTCTACTTATTTTGAGTCT
CCCACATCAGCCAGTCCGATCGCTCCTCGTAGGCCTCAACGCCATCGCTC
CTCCCCATTCTCACGGAATACCCTTCTTCCACAAAAGCAGCATGAGTACT
GCCTCGGAAATGGGCGCGTCTCCTCGTTGGGAAGGCCACTGGTCCGCTGG
GCTTAACAAGGGTGATATGTGGGACGCCGGTGTTGTGTCACCTGCCCTAC
AAGAACTTCTCGATGAAGATGTGTCCGAGCCCCTCTCTCTCCAAAGCCTG
TCTACTTATTTTGAGTCTCCCACATCAGCCAGTCCGATCGCTCCTCGTAG
GCCTCAACGCCATCGCTCCTCCCCATTCTCACGGAATACCCTTCTTCCAC
AAAAGCAGCATGAGTACTGCCTCGGAAATGGGCGCGTCTCCTCGTTGGGA
AGGCCACTGGTCCGCTGGGCTTAACAAGGGTGATATGTGGGACGCCGGTG
TTGTGTCACCTGCCCTACAAGAACTTCTCGATGAAGCAGGTGTGCTCCCA
AAGGGTCGCTCCCTAGTTCCCGGTTGTGGTCGTGGGTACGATGCCATCGC
CTTCGGCAAGAGCGGCTACGACTCGACAGGTCTTGACTTGTCACCGACCG
GGGTGGAGCAAGCGAAAGCTCTGCTTGCAGAGCAAAAAGAAGAGGAAATT
AGTGGAAAGCAGGTGTGCTCCCAAAGGGTCGCTCCCTAGTTCCCGGTTGT
GGTCGTGGGTACGATGCCATCGCCTTCGGCAAGAGCGGCTACGACTCGAC
AGGTCTTGACTTGTCACCGACCGGGGTGGAGCAAGCGAAAGCTCTGCTTG
CAGAGCAAAAAGAAGAGGAAATTAGTGGAAAGGTGCAATTCCGGTCCGGC
GACTTTTTCAAGTTTTCTCCAGAGGAAGAGGGAAAGTTCGACGTGGTCTT
GGACTACACGTTTCTCTGGTGCAATTCCGGTCCGGCGACTTTTTCAAGTT
TTCTCCAGAGGAAGAGGGAAAGTTCGACGTGGTCTTGGACTACACGTTTC
TCTGCGCGCTTGATCCGGCCGCACGCGAAAATTGGGCCACCCACATGGTG
TCACTGCTGAGTCCCGAGGGGGAGCTAGTGACCCTCATATTCCCGATCGT
GGAAAAGCGCGCTTGATCCGGCCGCACGCGAAAATTGGGCCACCCACATG
GTGTCACTGCTGAGTCCCGAGGGGGAGCTAGTGACCCTCATATTCCCGAT
CGTGGAAAAGGAGGGGGGACCGCCATTCGCTGTGAGCGAGTCGATCGTCT
CGAGCCTTCTGGAACCGCGGGGGCTCAAGGCCGTGCACCTCGAAAATCTC
CCGCCAAGCCTTTGCCACGAGGGGAGGGAGGGGAAGACCGCTCTCGGGCG
CTGGCGCTTTTCCAGCTCGGCGTGAGAGGGGGGACCGCCATTCGCTGTGA
GCGAGTCGATCGTCTCGAGCCTTCTGGAACCGCGGGGGCTCAAGGCCGTG
CACCTCGAAAATCTCCCGCCAAGCCTTTGCCACGAGGGGAGGGAGGGGAA
GACCGCTCTCGGGCGCTGGCGCTTTTCCAGCTCGGCGTGA
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