mRNA_L-elsbetiae_contig12994.2363.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig12994.2363.1
Unique NamemRNA_L-elsbetiae_contig12994.2363.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig12994.2363.1 vs. uniprot
Match: D7FZE6_ECTSI (Eukaryotic translation initiation factor 3 subunit L n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZE6_ECTSI)

HSP 1 Score: 464 bits (1193), Expect = 2.320e-160
Identity = 239/253 (94.47%), Postives = 246/253 (97.23%), Query Frame = 1 
Query:    1 MMRCAQAKKRPAANDAAVPAAPSQLHQMAGYFAIVGMSRLQCLLGDYYECIKVLEAIDITDKNEVFAGNMLAFVTVHQHAGLAFLMLKRYKDAARILNEALVHVGRANRSGQLQRSGYQDEVPKTADKMMALMAIATSLAPGAKIDEQMQSKMQDTHRDKLAKMAAGDDQAFRDLFSWASPKFVCSVGSREFYDLQTQLFMEEVKQQILFPQIRSYLKLYTTIGLEKIARFNDLDVEQFSAQLVSMKHKLTQV 759
            +M   +AKKRPAAN  AVPAAPSQLHQMAGYFAIVGMSRLQCLLGDYYECIKVLEAIDITDKNE+FAGNMLAFVTVHQHAGLAFLMLKRYKDAARIL+EALVHVGRANRSGQLQRSGYQDEVPKTADKMMALMAIATSLAPGAKIDEQMQSKMQDTHRDKLAKMA GDDQAFRDLFSWASPKFVCSVGSREFY++QTQLFMEEVKQQILFPQIRSYLKLYTTIGLEKIARFNDLD EQFSAQLVSMKHKLTQ+
Sbjct:  208 IMPILEAKKRPAAN-VAVPAAPSQLHQMAGYFAIVGMSRLQCLLGDYYECIKVLEAIDITDKNELFAGNMLAFVTVHQHAGLAFLMLKRYKDAARILSEALVHVGRANRSGQLQRSGYQDEVPKTADKMMALMAIATSLAPGAKIDEQMQSKMQDTHRDKLAKMAKGDDQAFRDLFSWASPKFVCSVGSREFYEMQTQLFMEEVKQQILFPQIRSYLKLYTTIGLEKIARFNDLDEEQFSAQLVSMKHKLTQM 459
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BLAST of mRNA_L-elsbetiae_contig12994.2363.1 vs. uniprot
Match: A0A835YSE4_9STRA (Eukaryotic translation initiation factor 3 subunit L n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSE4_9STRA)

HSP 1 Score: 251 bits (642), Expect = 9.460e-78
Identity = 128/252 (50.79%), Postives = 175/252 (69.44%), Query Frame = 1 
Query:   46 AAVPAAPSQLHQMAGYFAIVGMSRLQCLLGDYYECIKVLEAIDITDKNEVFAGNMLAFVTVHQHAGLAFLMLKRYKDAARILNEALVHVGRANRSGQLQRSGYQDEVPKTADKMMALMAIATSLAPGAKIDEQMQSKMQDTHRDKLAKMAAGDDQA---FRDLFSWASPKFVCSVGSREFYDL-----------QTQLFMEEVKQQILFPQIRSYLKLYTTIGLEKIARFNDLDVEQFSAQLVSMKHKLTQV 759
            A  P +PSQLHQM GY+ ++GMSRL CL+GDY++C+  L  +D+TD++++F  NM A+V+++ H GL+FLMLKRY+DAAR+L+E LVH+ RA ++GQLQ+ G + ++PK +DKMM L+AIA+ LAPG   DE +    QD+HRD+L +MA G D A    RDLF    PKF+  V S   Y +           Q QLF  E+ QQ+ FP++RSYLKLY TI + K+ARFN +    + A LVSMKHKLTQ+
Sbjct:  168 ATAPKSPSQLHQMMGYYGLIGMSRLHCLMGDYHQCLSTLAPLDVTDRSDLFGSNMHAYVSLYMHMGLSFLMLKRYRDAARVLSEILVHISRAAKTGQLQKPGME-QIPKQSDKMMCLLAIASFLAPGPAADETILQTAQDSHRDRLLRMADGGDNAENAVRDLFQMGCPKFI--VASVPDYSVVQNTSGACIQQQVQLFCHEMSQQLAFPKVRSYLKLYATISIAKMARFNGMSEADYLATLVSMKHKLTQL 416
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BLAST of mRNA_L-elsbetiae_contig12994.2363.1 vs. uniprot
Match: G3G5N9_9PHAE (Eukaryotic translation initiation factor 3 subunit 6 interacting protein (Fragment) n=93 Tax=Fucaceae TaxID=3010 RepID=G3G5N9_9PHAE)

HSP 1 Score: 218 bits (555), Expect = 2.090e-68
Identity = 107/122 (87.70%), Postives = 117/122 (95.90%), Query Frame = 1 
Query:  394 LMAIATSLAPGAKIDEQMQSKMQDTHRDKLAKMAAGDDQAFRDLFSWASPKFVCSVGSREFYDLQTQLFMEEVKQQILFPQIRSYLKLYTTIGLEKIARFNDLDVEQFSAQLVSMKHKLTQV 759
            LM IATSLAPGAKID+QMQ+KMQDTHRDKLAKMA GD+ AFRDLFSWASPKFVCSVGSREF D+QTQLFMEEV+QQ+LFPQIRSYLKLYTTIGL+KI+RFND+D EQFSAQLVSMKHKLTQ+
Sbjct:    1 LMTIATSLAPGAKIDDQMQAKMQDTHRDKLAKMATGDESAFRDLFSWASPKFVCSVGSREFCDMQTQLFMEEVRQQLLFPQIRSYLKLYTTIGLDKISRFNDMDEEQFSAQLVSMKHKLTQM 122
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BLAST of mRNA_L-elsbetiae_contig12994.2363.1 vs. uniprot
Match: A0A7S3XNM3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNM3_HETAK)

HSP 1 Score: 189 bits (479), Expect = 3.270e-53
Identity = 102/245 (41.63%), Postives = 152/245 (62.04%), Query Frame = 1 
Query:   55 PAAPSQLHQMAGYFAIVGMSRLQCLLGDYYECIKVLEAIDITDKNEVFAGNMLAFVTVHQHAGLAFLMLKRYKDAARILNEALVHVGRANRSGQLQRSGYQDEVPKTADKMMALMAIATSLAPGAKIDEQMQSKMQDTHRDKLAKMAAGDD-QAFRDLFSWASPKFVC-SVG--------SREFYDLQTQLFMEEVKQQILFPQIRSYLKLYTTIGLEKIARFNDLDVEQFSAQLVSMKHKLTQV 759
            P   S +H M GYF++VG+SRL+CLLGDY+  ++VL  ID  DK+E+F  ++   + +  H G A LML+RY+D      + L+H+ R  ++GQL  +   D+  K  +KM+AL AIA    PGA +DE ++ ++Q+ H ++   + AG D Q F DLF  A+PKF+  SV         +++    Q +LF+E+V  Q+  P+IRSYLKLY+T+ LEK+ARF  L   +  A LVS+KH+  QV
Sbjct:  247 PPGVSNVHLMLGYFSLVGLSRLECLLGDYHAALEVLGPIDTADKSELFTSSLACHLNLFYHTGFAQLMLRRYRDCLATFQDVLLHLHRLAKAGQLHSNPLGDQAGKLKEKMLALCAIAAHFCPGAPLDELVRRQIQEKHGERARALEAGGDAQPFEDLFVPAAPKFIVPSVPDYGQPVNFAQDAVKQQLRLFLEDVTSQLHLPKIRSYLKLYSTLSLEKLARFTGLGEAELEAALVSLKHRNRQV 491
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BLAST of mRNA_L-elsbetiae_contig12994.2363.1 vs. uniprot
Match: F0XXG4_AURAN (Eukaryotic translation initiation factor 3 subunit L n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XXG4_AURAN)

HSP 1 Score: 186 bits (471), Expect = 4.960e-52
Identity = 105/239 (43.93%), Postives = 142/239 (59.41%), Query Frame = 1 
Query:   61 APSQLHQMAGYFAIVGMSRLQCLLGDYYECIKVLEAIDITDKNEVFAGNMLAFVTVHQHAGLAFLMLKRYKDAARILNEALVHVGRANRSGQLQRSGYQDEVPKTADKMMALMAIATSLAPGAKIDEQMQSKMQDTHRDKLAKMAAGDDQAFRDLFSWASPKFVCSV---------GSREFYDLQTQLFMEEVKQQILFPQIRSYLKLYTTIGLEKIARFNDLDVEQFSAQLVSMKHKL 750
            APS LH   GYFA +  SR++CLLGDY   +  L A+D  D+   FA      + V  H G + +MLKRY+DA    +  L H+ R  + G LQR    D+V K  D+M+AL AIA +LAPG  +D+ + + ++D + DK+A M  GD   F ++ ++ASPKFV             S + Y  Q +LF +EV QQ    +IRSYLKLYT+IGL+K+ARFND  V  F AQLV +K KL
Sbjct:  196 APSPLHYQMGYFATISRSRVECLLGDYEASVAALGAVDPFDEGAEFAKIFSCRLNVLYHLGYSLMMLKRYRDALATFDGVLAHLARLAKHGGLQRFPAADQVQKMNDRMLALFAIALALAPGFPVDDGVAAAIKDKYGDKMALMERGDAATFDNMLTYASPKFVVPSIPDYGAPVNSSHDAYKQQIRLFNDEVLQQQKLSKIRSYLKLYTSIGLDKLARFNDESVAAFRAQLVGIKAKL 434
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BLAST of mRNA_L-elsbetiae_contig12994.2363.1 vs. uniprot
Match: R7QLU4_CHOCR (Eukaryotic translation initiation factor 3 subunit L n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLU4_CHOCR)

HSP 1 Score: 175 bits (443), Expect = 9.590e-48
Identity = 93/234 (39.74%), Postives = 145/234 (61.97%), Query Frame = 1 
Query:   73 LHQMAGYFAIVGMSRLQCLLGDYYECIKVLEAIDITDKNEVFAGNMLAFVTVHQHAGLAFLMLKRYKDAARILNEALVHVGRANRSGQLQRSGYQDEVPKTADKMMALMAIATSLAPGAKIDEQMQSKMQDTHRDKLAKMAAGDDQAFRDLFSWASPKFVCSVG---------SREFYDLQTQLFMEEVKQQILFPQIRSYLKLYTTIGLEKIARFNDLDVEQFSAQLVSMKHK 747
            +++  GYFAI+G+ R+  LLGDY   + VL+ +D    + +F       V+++ + G  ++ML+RY+DAARI +  ++H+GR   +    RS   +++ K  D+MMAL+A+  +L P  ++DE M S +++   D+LA++  G+  AF DLF +ASPKF+C            + E   LQT+LFMEEVK Q+L P+IRSYLKLYT I +EK+A   D+D     + L ++KHK
Sbjct:  232 VYRYIGYFAIIGLLRVNTLLGDYRLALMVLQPLDFDVSSALFTHVTACHVSIYYYMGFCYIMLRRYEDAARIFSSTVLHIGRIKHNHT--RSYQYEQINKRNDQMMALLALCLTLQP-LQVDESMMSMVREKAGDRLARLRQGEPHAFEDLFIYASPKFICPAAPDYDVIDDTNMEAPRLQTKLFMEEVKSQLLLPEIRSYLKLYTKIEIEKLAALMDVDESTLRSHLHALKHK 462
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BLAST of mRNA_L-elsbetiae_contig12994.2363.1 vs. uniprot
Match: A0A2B4RG74_STYPI (Eukaryotic translation initiation factor 3 subunit L n=3 Tax=Scleractinia TaxID=6125 RepID=A0A2B4RG74_STYPI)

HSP 1 Score: 173 bits (438), Expect = 4.470e-47
Identity = 94/236 (39.83%), Postives = 148/236 (62.71%), Query Frame = 1 
Query:   73 LHQMAGYFAIVGMSRLQCLLGDYYECIKVLEAIDITDKNEVFAGNMLAFVTVHQHAGLAFLMLKRYKDAARILNEALVHVGRANRSGQLQRSGYQ-DEVPKTADKMMALMAIATSLAPGAKIDEQMQSKMQDTHRDKLAKMAAGDDQAFRDLFSWASPKFVCSVG----------SREFYDLQTQLFMEEVKQQILFPQIRSYLKLYTTIGLEKIARFNDLDVEQFSAQLVSMKHK 747
            L++M GYF+++G+ RL  LLGDY++ IKVLE +++ +K  +++      +T + + G A+LM+KRY+DA R  +  L+++ R       Q   YQ +++ K  D+M  L+AI  +L P  +IDE + S++++ + D+L ++  GD Q F + FS+A PKF+  V           +RE ++LQ ++FM EV QQ L P IRSYLKLYTT+ + K+A F D+D  QF  QL+  KHK
Sbjct:  239 LYKMLGYFSLIGLLRLHSLLGDYFQAIKVLENVEL-NKKSLYSRVPACQITTYYYVGFAYLMMKRYQDAIRSFSNILLYIQRTK--NMFQTKSYQYEQIMKKNDQMYVLLAICLTLCP-QRIDENVHSQLREKNADRLQRLQRGDLQTFEESFSYACPKFISPVPPNFDAPPANFNREPFNLQLKVFMNEVSQQSLIPVIRSYLKLYTTMPIAKLAAFLDMDKSQFRTQLLCFKHK 470
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BLAST of mRNA_L-elsbetiae_contig12994.2363.1 vs. uniprot
Match: A0A6J8D4W6_MYTCO (Eukaryotic translation initiation factor 3 subunit L n=3 Tax=Mytilus TaxID=6548 RepID=A0A6J8D4W6_MYTCO)

HSP 1 Score: 171 bits (433), Expect = 2.010e-46
Identity = 94/239 (39.33%), Postives = 147/239 (61.51%), Query Frame = 1 
Query:   73 LHQMAGYFAIVGMSRLQCLLGDYYECIKVLEAIDITDKNEVFAGNMLAFVTVHQHAGLAFLMLKRYKDAARILNEALVHVGRANRSGQLQRSGYQDEVPKTADKMMALMAIATSLAPGAKIDEQMQSKMQDTHRDKLAKMAAGDDQAFRDLFSWASPKFVCSV----------GSREFYDLQTQLFMEEVKQQILFPQIRSYLKLYTTIGLEKIARFNDLDVEQFSAQLVSMKHKLTQV 759
            L++M GYF+++G+ RL  LLGDYY+ +KVLE+ID   KN +++      +T   + G  ++M++RY+DA R L+  L+++ R  +  Q  R+   D++ K  DKM  L+AI   L P  +IDE + S++++   DK+ +M  GD + F   FS+A PKF+  V            +E + LQ ++F++EV+QQIL P IRSYLKLYTT+ L K+A F ++ VE+    L+  KHK+  V
Sbjct:  229 LYKMLGYFSLIGLLRLHSLLGDYYQALKVLESIDFNKKN-MYSRVPACQITTFYYVGFCYMMMRRYQDAIRTLSNVLLYIQRTKQMFQ-SRAQLYDQITKMNDKMYTLLAICLVLHP-MRIDESVHSQLREKFADKMLRMQKGDIEEFTSNFSFACPKFLSPVPPNYDTPSVVNHKEPFMLQHKVFIDEVQQQILLPTIRSYLKLYTTLPLSKLAGFMEMPVEELKTHLMCFKHKMKNV 464
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BLAST of mRNA_L-elsbetiae_contig12994.2363.1 vs. uniprot
Match: A0A2C9KUU3_BIOGL (Eukaryotic translation initiation factor 3 subunit L n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9KUU3_BIOGL)

HSP 1 Score: 171 bits (432), Expect = 3.750e-46
Identity = 96/239 (40.17%), Postives = 150/239 (62.76%), Query Frame = 1 
Query:   67 SQLHQMAGYFAIVGMSRLQCLLGDYYECIKVLEAIDITDKNEVFAGNMLAFVTVHQHAGLAFLMLKRYKDAARILNEALVHVGRANRSGQLQRSGYQDEVPKTADKMMALMAIATSLAPGAKIDEQMQSKMQDTHRDKLAKMAAGDDQAFRDLFSWASPKFVCSV-------GS----REFYDLQTQLFMEEVKQQILFPQIRSYLKLYTTIGLEKIARFNDLDVEQFSAQLVSMKHKL 750
            + L++M GY+++VG+ RL  LLGDYY+ +KVLE ID  +KN +++      +T + + G A++M++RY+DA R L+  L+++ R     Q +   Y D++ K  DKM  L++I   L P  +IDE + S +++ ++DK+ +M  G+ Q F   FS+A PKF+  V       GS    +E Y LQ  +F EEV+QQIL P IRSYLKLYTT+ + K+A F +++ E+   QL+  KHK+
Sbjct:  245 NSLYKMLGYYSLVGLLRLHSLLGDYYQALKVLENIDF-NKNSLYSKVPACQITKYYYVGFAYMMMRRYEDAIRTLSTILLYIQRTKTMFQNKTQLY-DQISKMNDKMYTLLSICLVLYP-MRIDESVHSHLREKYQDKMNRMQKGEKQEFETSFSFACPKFLSPVPPNYDSDGSVTMFKEPYQLQLLVFKEEVEQQILIPTIRSYLKLYTTMPISKLAAFMEMNEEELCTQLMCFKHKM 480
[Close]
BLAST of mRNA_L-elsbetiae_contig12994.2363.1 vs. uniprot
Match: A0A210QGE9_MIZYE (Eukaryotic translation initiation factor 3 subunit L n=4 Tax=Pectinidae TaxID=6566 RepID=A0A210QGE9_MIZYE)

HSP 1 Score: 171 bits (432), Expect = 5.710e-46
Identity = 90/236 (38.14%), Postives = 145/236 (61.44%), Query Frame = 1 
Query:   73 LHQMAGYFAIVGMSRLQCLLGDYYECIKVLEAIDITDKNEVFAGNMLAFVTVHQHAGLAFLMLKRYKDAARILNEALVHVGRANRSGQLQRSGYQDEVPKTADKMMALMAIATSLAPGAKIDEQMQSKMQDTHRDKLAKMAAGDDQAFRDLFSWASPKF----------VCSVGSREFYDLQTQLFMEEVKQQILFPQIRSYLKLYTTIGLEKIARFNDLDVEQFSAQLVSMKHKL 750
            L++M GYF+++G+ RL  LLGDYY+ +K LE ID   KN +++      +T   + G A+LM++RY+DA R  +  L+++ R  +  Q +   Y D++ K  DKM  L++I+  L P  +IDE + S++++   DK+ +M  GD + F+  FS+A PKF          +  +  +E + LQ ++F+EEV+QQI+ P IRSYLKLYTT+ L K+A F D+  ++    L+  KHK+
Sbjct:  240 LYKMLGYFSLIGLLRLHSLLGDYYQALKCLECIDFNKKN-MYSRVPACQITTFYYVGFAYLMMRRYQDAIRTFSNILLYIQRTKQMFQTRAQLY-DQISKMNDKMYTLLSISLVLHP-MRIDESVHSQLREKFADKMLRMQKGDQEEFQQNFSFACPKFLSPVPPNYDTIAGINHKEPFSLQLKVFLEEVRQQIVLPTIRSYLKLYTTLPLSKLAIFMDMSEDELRTHLMCFKHKM 472
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12994.2363.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZE6_ECTSI2.320e-16094.47Eukaryotic translation initiation factor 3 subunit... [more]
A0A835YSE4_9STRA9.460e-7850.79Eukaryotic translation initiation factor 3 subunit... [more]
G3G5N9_9PHAE2.090e-6887.70Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S3XNM3_HETAK3.270e-5341.63Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
F0XXG4_AURAN4.960e-5243.93Eukaryotic translation initiation factor 3 subunit... [more]
R7QLU4_CHOCR9.590e-4839.74Eukaryotic translation initiation factor 3 subunit... [more]
A0A2B4RG74_STYPI4.470e-4739.83Eukaryotic translation initiation factor 3 subunit... [more]
A0A6J8D4W6_MYTCO2.010e-4639.33Eukaryotic translation initiation factor 3 subunit... [more]
A0A2C9KUU3_BIOGL3.750e-4640.17Eukaryotic translation initiation factor 3 subunit... [more]
A0A210QGE9_MIZYE5.710e-4638.14Eukaryotic translation initiation factor 3 subunit... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12994contigL-elsbetiae_contig12994:174..4811 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score467.2
Seed ortholog evalue4.8e-129
Seed eggNOG ortholog2880.D7FZE6
Preferred nameEIF3L
KEGG koko:K15029
Hectar predicted targeting categoryother localisation
GOsGO:0001650,GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005829,GO:0005852,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016032,GO:0019080,GO:0019081,GO:0019538,GO:0031974,GO:0031981,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044452,GO:0044464,GO:0051704,GO:0070013,GO:0071704,GO:0075525,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.translation initiation factor activity
EggNOG OGsKOG3677@1,KOG3677@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03012
Ec32 ortholog descriptionEukaryotic translation initiation factor 3 subunit l eukaryotic translation initiation factor eIF3 s
Ec32 orthologEc-27_001530.1
Exons5
Model size759
Cds size759
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12994.2363.1prot_L-elsbetiae_contig12994.2363.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig12994 174..4811 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815479.4111953-CDS-L-elsbetiae_contig12994:173..3211622815479.4111953-CDS-L-elsbetiae_contig12994:173..321Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12994 174..321 +
1691682918.11401-CDS-L-elsbetiae_contig12994:173..3211691682918.11401-CDS-L-elsbetiae_contig12994:173..321Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12994 174..321 +
1622815479.4233012-CDS-L-elsbetiae_contig12994:1394..15431622815479.4233012-CDS-L-elsbetiae_contig12994:1394..1543Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12994 1395..1543 +
1691682918.1269426-CDS-L-elsbetiae_contig12994:1394..15431691682918.1269426-CDS-L-elsbetiae_contig12994:1394..1543Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12994 1395..1543 +
1622815479.4341042-CDS-L-elsbetiae_contig12994:2184..23311622815479.4341042-CDS-L-elsbetiae_contig12994:2184..2331Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12994 2185..2331 +
1691682918.135439-CDS-L-elsbetiae_contig12994:2184..23311691682918.135439-CDS-L-elsbetiae_contig12994:2184..2331Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12994 2185..2331 +
1622815479.4465382-CDS-L-elsbetiae_contig12994:3232..33761622815479.4465382-CDS-L-elsbetiae_contig12994:3232..3376Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12994 3233..3376 +
1691682918.1438832-CDS-L-elsbetiae_contig12994:3232..33761691682918.1438832-CDS-L-elsbetiae_contig12994:3232..3376Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12994 3233..3376 +
1622815479.4607549-CDS-L-elsbetiae_contig12994:4640..48111622815479.4607549-CDS-L-elsbetiae_contig12994:4640..4811Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12994 4641..4811 +
1691682918.15267-CDS-L-elsbetiae_contig12994:4640..48111691682918.15267-CDS-L-elsbetiae_contig12994:4640..4811Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12994 4641..4811 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig12994.2363.1

>prot_L-elsbetiae_contig12994.2363.1 ID=prot_L-elsbetiae_contig12994.2363.1|Name=mRNA_L-elsbetiae_contig12994.2363.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=253bp
MMRCAQAKKRPAANDAAVPAAPSQLHQMAGYFAIVGMSRLQCLLGDYYEC
IKVLEAIDITDKNEVFAGNMLAFVTVHQHAGLAFLMLKRYKDAARILNEA
LVHVGRANRSGQLQRSGYQDEVPKTADKMMALMAIATSLAPGAKIDEQMQ
SKMQDTHRDKLAKMAAGDDQAFRDLFSWASPKFVCSVGSREFYDLQTQLF
MEEVKQQILFPQIRSYLKLYTTIGLEKIARFNDLDVEQFSAQLVSMKHKL
TQV
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mRNA from alignment at L-elsbetiae_contig12994:174..4811+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig12994.2363.1 ID=mRNA_L-elsbetiae_contig12994.2363.1|Name=mRNA_L-elsbetiae_contig12994.2363.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4638bp|location=Sequence derived from alignment at L-elsbetiae_contig12994:174..4811+ (Laminarionema elsbetiae ELsaHSoW15)
ATGATGCGATGCGCGCAGGCGAAGAAGAGGCCGGCGGCGAACGACGCGGC
CGTGCCCGCGGCCCCGTCGCAGCTCCACCAGATGGCGGGGTACTTCGCCA
TCGTCGGCATGTCGAGGCTGCAGTGCTTGCTCGGGGACTACTACGAGTGT
GAGTGCGGGCATGTATGTATAGACAGGAGAGAAAAAAAACGCCGCGAAGA
GCTTGCGTAAAAAACAAACACAGCATCTATCCATACATACCATGCGGTCT
GTCTGTCTTGTCTGTCTGTCTGTCTGTCTGTGGCACCTTTTGCTCCGAGC
ATTTCTTCATGTCGTAAGATCAAAGCAAATTCGTTTTCACGCCCACTCTT
ACAACATTCTCTAATAATTATCTTTTGCTTTCCGAGTGATGCAGGTTCAA
GATATTTTTCGAGCAGTATTACTCACGCAAGATAATCCTTGTACCTACAA
TACCTGCCTACCAGTCGGATCGGTCGTCATATTACAAGTACTGACATACA
GCTTAGAAGCTAGCTAGCTACAAATGGTGTGGTAACCCAGGTGTCTGGTC
TCGTTCTCGCAGGGGGGCTTGCTTGCTCCGGGCCATATGGTTTTCTTCTT
TTGTCGTGTTCACTCCTCTGCTGCCTGCGCACTTCTGGTCCCGTGTTGCT
CTGTAGTTATTACAAAGTTCACGGGAGAAAACGACATGAGGCGTTCTTCT
CGAAAGGAGCCAAGTTGGAAAATGCGTGGCTGGATTGCGAGGGTGATACA
TGTGGGAGCGCAGTTCTCTGTGCCAGCAGCAGCTATCTTGACTCGAGGCG
AAAACACCTGTGTTGCCATGGTTGGTTGGCATGGGAAGGAGTTGAAACAA
TAACAGGTCGTCGTGTCGTGTTCGATCGCACGCCTGCCCGCCCGCCTGGC
TGCTCTCTCTCTCTCTCCTCCCCATTGCACTCACTGCGTGACTCGGCGGC
CACAGGCCACACAGCAAGCAGCGCAACACTACCCGCGTGGTGGTGCTTTC
TTACTGATTCGTGTTGCTATTTTTTGGTGTTTTTGCAGCTGAACATACAA
GCGAGGGAGAAAGAGAGAGAAAGACAGAGAGAGAGAGAGAGAGAGAGAGA
GTTCTCTTGAGCTTTTTTTTCAATTTCTGGGTCGGTTTTTGCTGCTCGGC
TGGCTGCTGCGCGTTCTCTCTCTCTCTCTCTCTTGCGAAACGAAACCAAA
CGAATAAAAAATGCAATGCAGGCATCAAGGTGCTGGAAGCGATCGACATC
ACGGACAAGAACGAGGTGTTCGCCGGCAACATGCTCGCCTTTGTCACGGT
GCACCAGCACGCCGGCCTGGCCTTCCTCATGCTCAAGCGCTACAAGGACG
CGGCGCGGATCCTCAACGAGGTACGTAGGTGGCGGTGGCGGTGGTGGTGG
CGGTAAATATATTAAATATTTTTTTTTGAAAGGTTTTCTGTTGGATGTCT
ACATACCTTTGAAAATGGCCATTGCTTGTTTGTTTTCGTGGTGTAGTTGG
GTATCCGTAAGAAAAAAAAAAAAAAAAAGTTTTTTCAGTATACCCTTTTT
AGAATTAAGTCATCCATCCTGTGACCATGGGAATCGACCGCGTCAGTGTT
GGATTAGTACGGACTCATGGAGGTGGTACCGGATAGAGAGATCAGATTGG
TTTTTAATGATTGAAGACAGCATCGACTACACGCACCGGGTTGGGCTGTG
TGGCGGCTTTCAGTGTTGAATGTTCGCCGTGGAGATGGACTAGCTGTGAC
AGTCAGTAGTTGTTCTCCTGTTTTGTCCACCTCGTAGCAGTGTGAAGCTG
CTGTTGCTGGATGGTTGATGTCGAATGTAGACTTGTATTTTGTCACGTTG
TCGTCGTTGTTTTGTCTTTGCTCCTTAGTCTCCTTAGTCTCCTTCGACCT
ATGTATTTTTGTTTCACCTCTTCCCTCCCCTATTTGTGCCATGAATGAAC
GCAATGCGATGATGACGACAACAACAAACGAACAAACAAAAAATGGCAAA
TTGTTGCGCAGGCGTTGGTTCACGTGGGGCGAGCAAACCGCAGCGGGCAG
CTGCAGCGGTCGGGCTACCAGGACGAGGTGCCCAAGACCGCGGACAAGAT
GATGGCGCTCATGGCCATCGCCACCAGCCTGGCGCCGGGGGCTAAGATCG
ACGAGCAGGTAAGTGAAATCAGTCAGTCAACCGGCCAATCAAGTCGCCAA
TCAGTCAAAGAATCGATCGCCAAACATGAGTGGGTCAGTGAGTGTTGCTC
TCCTGGGCACATCGACCGACCTACCAGACGAGGGAAAGGGACGGCTGCTG
AACCCTTCTCGCGACAAAAAATAAATAGATGTGGGCAAGCACCGCAGACG
GCGGGGGGGGGGGGGGGGGGGGCCCCGGGGGAAAAAACCCCTTTTGTGTT
TGCCCCCGGGGTTACGCCCCGTGGAAAAAGGCACCCGGGCCAGCCCGCCC
CACGGACCAGGGAANNNNNNNNNNGGGGGGCGCCCACGCAAGCAACAAAA
GAAAAAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGGGGGGAGGCCCCGGGGGAAAGAGACCCTTCTGTGTATGTCACC
ACGGTTCAGCACTCTGGCAAGATGCACTCGTGACAGCCAGCCCATCGAGC
ACTGGAAATAAATGTGAAGAATAAAAAATAAATAAATAAGTAAAAGTAAA
TGTTTTGTAAGCAGTTCGCTCGTTCGTTCGTTCGTTCTCCTTGTTCTTGT
TTTTTTATTTTCCGGTGCAGTGCAAAGTATATAGTTTATTGTGTGTGTGT
GGGGGGGGCTGCTGCTGCTGCTGCTGCACCCCTGTGTTGCTTGCTGTCTT
CTCGTCGCCGCCCCCGCCCCCGCCCCCGCTCACGCTCGCTCCCGCGCGCC
TGCGCCGGGTAGGATTTCATCGCTGGATTCTTAGCCGCCTCGCCTCGCTG
CCGCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGGCTCTCGCTGCTGG
GGGTGCTGCTTGCTGCTCGGGGTTATCGCATATCGCATACCGCATATCGC
GTATCGCAGATGCAGTCCAAGATGCAGGACACGCACCGGGACAAGCTGGC
GAAGATGGCGGCGGGAGACGACCAGGCGTTCCGCGACCTTTTCTCGTGGG
CGTCGCCGAAGTTCGTGTGCTCCGTCGGCAGCCGAGAGTTCTACGATCTG
CAGGTGGGTGAGGGGGGTGCGCGGAAGAGGGGGAGGAGGAGGGGGGGGGG
GGGGGGAGCGGAGAAATGTCAGCGTTTGTTTCCTATGTAGAGAGGGTTTA
TTTTTTGGGGGGGGGTTGGAACTGGTGTCGTCGTCATCATGATACTATTT
AAAGTATGAGGGGGAGAGAGCCGAGGGAGGGGGGGGGGGGGGGGCACTCA
TGGTCCGCCTGTGGGTTGAGATTTCACACGTCTGTTTATTGTTGCTCACC
GCTGCCACCGTTGGTTTGGGTTTCGCTGCTGTGGCTGTTTCTCGCTCGAA
CAACCCAGCCGTCGTTTTTTGTGTGGTTTCGTCCGTTTGTGTGGTGTTTC
AGCGACTTTGTTGAGTCTTAGTCCTAGCGTCAGATCGAGAGAGAGAGAAG
TCAGCCCTTGTGTTTCAAGGAAGGCAGCCAGCCTAACCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGTTTTCTTTTTT
CTCTTCGCTCCTCCTTCCTTTCTTCCTGTTTTTCGTTCTCTGTTTCTCTG
CACTTTNNNNNNNNNNGTTGGGTCTTAGTCCTAGCGGCAGATCGAGAGAG
AGAGAAGTCAGCCCTTGTGTTTCAAGGAAGGCAGCCAGCCTAACCCCCCC
CCCCCCCCCCATCCCCCGACTAGACTCGATGATAGTCCGAGGTGTTTGAT
TGGATTGCCGAGCAATAGCCAGAGTTTTGGATTATGGCCATATGCCACAC
GACGTCGCGTTCTCTCCTTTTGTTCCTGTGTTTGGACGGTTGATGGCGCG
TTCTCGGTCTTCGCCGCGGGACGTAAGGAAAGGAAATGGGATCAGGGAAG
CGGTGGGAAGGGAGGGGAGAACTTCTTTCGAAAGCGACGCCCTTTCATGC
TTGAAAATGAGCATTACACGCCCTGTGTGTATTTCTCGCGTCGTGTGAGA
AAACATTGGCGACCTGAGAACGCCTATTTAGTAGATACTGCTGCTGTTAG
ACTAATCTTGTAGAACAGAGGCGGTGACAGAACTTGGGGGTGGCACGTCG
ATGCAACTACATACCCCCAATGGAGATGCCAATTCTGTGGAGGTCCCCCC
CCCCCCCTCCCCTCCTCCCTTCCCCGCGCGCGCGCTCGTTTTGTTTTTTG
GTTGGACAATTGTTATTGTTTGTCCCTCCTCCGGGTGTAAAAAATCAATT
GGAAAAAATAACACGAAGAAACGAATTCGCCAAATTACATAATTTTGTGC
CAAAAAAAAACACGCAGACCCAGCTCTTCATGGAGGAGGTGAAGCAGCAG
ATCCTGTTCCCGCAGATCCGATCCTACCTGAAGCTGTACACCACCATCGG
GCTGGAGAAGATCGCGAGGTTCAACGACCTCGACGTGGAGCAGTTCAGCG
CGCAGCTGGTGTCCATGAAGCACAAGCTCACACAGGTA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig12994:174..4811+

>mRNA_L-elsbetiae_contig12994.2363.1 ID=mRNA_L-elsbetiae_contig12994.2363.1|Name=mRNA_L-elsbetiae_contig12994.2363.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1518bp|location=Sequence derived from alignment at L-elsbetiae_contig12994:174..4811+ (Laminarionema elsbetiae ELsaHSoW15)
ATGATGCGATGCGCGCAGGCGAAGAAGAGGCCGGCGGCGAACGACGCGGC
CGTGCCCGCGGCCCCGTCGCAGCTCCACCAGATGGCGGGGTACTTCGCCA
TCGTCGGCATGTCGAGGCTGCAGTGCTTGCTCGGGGACTACTACGAGTAT
GATGCGATGCGCGCAGGCGAAGAAGAGGCCGGCGGCGAACGACGCGGCCG
TGCCCGCGGCCCCGTCGCAGCTCCACCAGATGGCGGGGTACTTCGCCATC
GTCGGCATGTCGAGGCTGCAGTGCTTGCTCGGGGACTACTACGAGTGCAT
CAAGGTGCTGGAAGCGATCGACATCACGGACAAGAACGAGGTGTTCGCCG
GCAACATGCTCGCCTTTGTCACGGTGCACCAGCACGCCGGCCTGGCCTTC
CTCATGCTCAAGCGCTACAAGGACGCGGCGCGGATCCTCAACGAGGCATC
AAGGTGCTGGAAGCGATCGACATCACGGACAAGAACGAGGTGTTCGCCGG
CAACATGCTCGCCTTTGTCACGGTGCACCAGCACGCCGGCCTGGCCTTCC
TCATGCTCAAGCGCTACAAGGACGCGGCGCGGATCCTCAACGAGGCGTTG
GTTCACGTGGGGCGAGCAAACCGCAGCGGGCAGCTGCAGCGGTCGGGCTA
CCAGGACGAGGTGCCCAAGACCGCGGACAAGATGATGGCGCTCATGGCCA
TCGCCACCAGCCTGGCGCCGGGGGCTAAGATCGACGAGCAGGCGTTGGTT
CACGTGGGGCGAGCAAACCGCAGCGGGCAGCTGCAGCGGTCGGGCTACCA
GGACGAGGTGCCCAAGACCGCGGACAAGATGATGGCGCTCATGGCCATCG
CCACCAGCCTGGCGCCGGGGGCTAAGATCGACGAGCAGATGCAGTCCAAG
ATGCAGGACACGCACCGGGACAAGCTGGCGAAGATGGCGGCGGGAGACGA
CCAGGCGTTCCGCGACCTTTTCTCGTGGGCGTCGCCGAAGTTCGTGTGCT
CCGTCGGCAGCCGAGAGTTCTACGATCTGCAGATGCAGTCCAAGATGCAG
GACACGCACCGGGACAAGCTGGCGAAGATGGCGGCGGGAGACGACCAGGC
GTTCCGCGACCTTTTCTCGTGGGCGTCGCCGAAGTTCGTGTGCTCCGTCG
GCAGCCGAGAGTTCTACGATCTGCAGACCCAGCTCTTCATGGAGGAGGTG
AAGCAGCAGATCCTGTTCCCGCAGATCCGATCCTACCTGAAGCTGTACAC
CACCATCGGGCTGGAGAAGATCGCGAGGTTCAACGACCTCGACGTGGAGC
AGTTCAGCGCGCAGCTGGTGTCCATGAAGCACAAGCTCACACAGGTAACC
CAGCTCTTCATGGAGGAGGTGAAGCAGCAGATCCTGTTCCCGCAGATCCG
ATCCTACCTGAAGCTGTACACCACCATCGGGCTGGAGAAGATCGCGAGGT
TCAACGACCTCGACGTGGAGCAGTTCAGCGCGCAGCTGGTGTCCATGAAG
CACAAGCTCACACAGGTA
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