prot_L-elsbetiae_contig12990.2362.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12990.2362.1
Unique Nameprot_L-elsbetiae_contig12990.2362.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length85
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig12990.2362.1 vs. uniprot
Match: D8LG52_ECTSI (Flagellar associated protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG52_ECTSI)

HSP 1 Score: 114 bits (285), Expect = 1.890e-28
Identity = 57/69 (82.61%), Postives = 62/69 (89.86%), Query Frame = 0 
Query:    2 QAVEVRPANGKSGPVSRSGPKKLEDLEAEGKLAMDRLEDIANYMGDYRDIVDEHAEIQRAQKRLESALP 70
            +AVEVR  NGKSGPVS+SGPKKLEDLEAEGKLAMDRLEDIANYMGDYRDIVDE+A++ R  KRLE A P
Sbjct:  293 KAVEVRAPNGKSGPVSKSGPKKLEDLEAEGKLAMDRLEDIANYMGDYRDIVDEYADLHRVHKRLEGATP 361
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12990.2362.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LG52_ECTSI1.890e-2882.61Flagellar associated protein n=1 Tax=Ectocarpus si... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12990contigL-elsbetiae_contig12990:501..1514 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12990.2362.1mRNA_L-elsbetiae_contig12990.2362.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12990 501..1514 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12990.2362.1 ID=prot_L-elsbetiae_contig12990.2362.1|Name=mRNA_L-elsbetiae_contig12990.2362.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=85bp
MQAVEVRPANGKSGPVSRSGPKKLEDLEAEGKLAMDRLEDIANYMGDYRD
IVDEHAEIQRAQKRLESALPPTTTTTTTAVAAAPP
back to top