mRNA_L-elsbetiae_contig1019.236.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1019.236.1
Unique NamemRNA_L-elsbetiae_contig1019.236.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig1019.236.1 vs. uniprot
Match: D7FKJ5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKJ5_ECTSI)

HSP 1 Score: 693 bits (1788), Expect = 2.310e-242
Identity = 364/404 (90.10%), Postives = 376/404 (93.07%), Query Frame = 3 
Query:  816 MLGRRHSGLGEAFSRGLRRRAPAPCGTAPSSTQAAALAKASAHYDLVVVGSGPAAQKCAIESAKYGKSVCIVDKSSQIGGVCVHTGTIPSKTFREAVLHLTGWRHQGFYGRSSQRARAAVAIPDVLARVHKVEMRETGVVRDQLQREGIELISGTARFLPGAEGEPHRVMVLRTSEKTEAKTSVYRHIEASLPSVTLSADRFLVACGTRPLRRPDVPFDGSRVFDSDQLLWGGVKVVPRDLIVVGAGVIGMEYASMINVIPGTTVTVIDPRDEVLGFADREVTQALCYSMRKNGARLWCLLACRLVKSVEKRDDGKVV-AHLLSGKRVCGDALLYAMGRLGNTDSLNLQAIGVDPDERGLLNVDDFYRTAQSGVYACGDVIGYPALASTSMEQGVRAAHHMWNE 2024
            MLGRRH  LGEA SRGL+R AP+ CG A SSTQAAALAK+SAHYDLV+VGSGPAAQKCAIESAKYGKSVCIVDKSSQ+GGVCVHTGTIPSKTFREAVLHLTGWRHQGFYGRSSQRARAAVAIPDVLARV   E +ET VVRDQLQREGIELISGTARFLPG+EGEPHRVMVLRTSEKTEAKTSVYRHIEASLPSVTLSADRFLVACGTRPLRRPDVPFDGSRVFDSDQLLWGGV  VPRDLIVVGAGVIGMEYASMINVIPGTTVTVIDPRDEVLGFADREVTQALCYSMRKNGAR    L    VKSVEK  DG VV AHLLSGKRV GDALLYAMGRLGNTDSLNL+AIGVDPDERGLLNVDD Y+TAQ+GVYACGDVIGYPALASTSMEQGVRAAHHMW++
Sbjct:    1 MLGRRHLRLGEALSRGLQRHAPSLCGRA-SSTQAAALAKSSAHYDLVIVGSGPAAQKCAIESAKYGKSVCIVDKSSQLGGVCVHTGTIPSKTFREAVLHLTGWRHQGFYGRSSQRARAAVAIPDVLARV---EAKETEVVRDQLQREGIELISGTARFLPGSEGEPHRVMVLRTSEKTEAKTSVYRHIEASLPSVTLSADRFLVACGTRPLRRPDVPFDGSRVFDSDQLLWGGVDRVPRDLIVVGAGVIGMEYASMINVIPGTTVTVIDPRDEVLGFADREVTQALCYSMRKNGARF---LLGEKVKSVEKMADGTVVVAHLLSGKRVKGDALLYAMGRLGNTDSLNLEAIGVDPDERGLLNVDDSYQTAQAGVYACGDVIGYPALASTSMEQGVRAAHHMWSD 397
[Close]
BLAST of mRNA_L-elsbetiae_contig1019.236.1 vs. uniprot
Match: A0A835ZER9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZER9_9STRA)

HSP 1 Score: 477 bits (1227), Expect = 5.510e-158
Identity = 240/375 (64.00%), Postives = 291/375 (77.60%), Query Frame = 3 
Query:  942 HYDLVVVGSGPAAQKCAIESAKYGKSVCIVDKSSQIGGVCVHTGTIPSKTFREAVLHLTGWRHQGFYGRSSQRARAAVAIPDVLARVHKVEMRETGVVRDQLQREGIELISGTARFLPGAEGEPH---------RVMVLRTSEKTEAKTSVYRHIEASLPSVTLSADRFLVACGTRPLRRPDVPFDGSRVFDSDQLLWGGVKVVPRDLIVVGAGVIGMEYASMINVIPGTTVTVIDPRDEVLGFADREVTQALCYSMRKNGARLWCLLACRLVKSVEKRDDG------KVVAHLLSGKRVCGDALLYAMGRLGNTDSLNLQAIGVDPDERGLLNVDDFYRTAQSGVYACGDVIGYPALASTSMEQGVRAAHHMWN 2021
            HYDL+++GSGPAAQKCA++SAK G+ V +VDK   IGGVCVHTGTIPSKTFREAVLHLTG+RHQGFYGR+ Q  R  +++PD+L RV KVE  ET +V DQ++REG+E+I+GTARF    E +           RVMVL+T    E++ S YRH++A++  + LSA+  L+ACGTRPLR   +PFDG RVFDSDQLLWGGV+ VPR+L+VVGAGVIGMEYASM+N+IPGT VTVIDPRD++LGFAD EV QAL YSMR  GAR    L    V+ VEK D G      +VVAHL SGK+V GDA+LYAMGR GNTDSL+L ++G++ D RGLL V+DFY+T+   VYACGDVIGYPALASTSMEQG RAA HMW+
Sbjct:   55 HYDLIIIGSGPAAQKCAVDSAKLGRRVAVVDKLGMIGGVCVHTGTIPSKTFREAVLHLTGFRHQGFYGRAYQPWRERISVPDLLLRVQKVEKTETDIVVDQMRREGVEVITGTARFAEADEDDAFTDATSEGAVRVMVLKTDASHESEASAYRHLDANMAKMALSAENVLIACGTRPLRPAHIPFDGVRVFDSDQLLWGGVRDVPRELMVVGAGVIGMEYASMMNIIPGTNVTVIDPRDKMLGFADTEVVQALMYSMRTKGARF---LLNEKVERVEKTDAGGSGGRGRVVAHLSSGKKVVGDAMLYAMGRQGNTDSLSLGSVGLETDNRGLLEVNDFYQTSNPRVYACGDVIGYPALASTSMEQGRRAALHMWH 426
[Close]
BLAST of mRNA_L-elsbetiae_contig1019.236.1 vs. uniprot
Match: D7FHH4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH4_ECTSI)

HSP 1 Score: 419 bits (1077), Expect = 1.740e-136
Identity = 214/341 (62.76%), Postives = 260/341 (76.25%), Query Frame = 3 
Query: 1011 GKSVCIVDKSSQIGGVCVHTGTIPSKTFREAVLHLTGWRHQGFYGRSSQRARAAVAIPDVLARVHKVEMRETGVVRDQLQREGIELISGTARFLPGAEGEPH-RVMVLRT-SEKTEAKTSVYRHIEASLPSVTLSADRFLVACGTRPLRRPDVPFDGSRVFDSDQLLWGGVKVVPRDLIVVGAGVIGMEYASMINVIPGTTVTVIDPRDEVLGFADREVTQALCYSMRKNGARLWCLLACRLVKSVEKRDDG---KVVAHLLSGKRVCGDALLYAMGRLGNTDSLNLQAIGVDPDERGLLNVDDFYRTAQSGVYACGDVIGYPALASTSMEQGVRAAHHMW 2018
            GK V +VDK   +GGVCVHTGTIP    REAVLHLTG+RHQGFYGRS ++    +++PD+L+RV KVE  ET VV DQL REG+E+I+GTARF+    G+     MVLR+  ++ EA +S YRH+ A  P   +SA+RFLVACGTRP+R PD+PFDG+ +FDSDQLLWGG+  +PRDLIVVGAGVIGMEYA MINV+PGTTVTVIDPR  VL FAD +V + L Y+MR+NGAR         ++ +EK+D     KV+AHL SGKRV GDALLY MGR GNTDS++L   G++ D+RGLL V+DFY+T+   VYACGDVIGYPALASTSMEQG RAA HMW
Sbjct:   15 GKRVAVVDKKDLLGGVCVHTGTIP----REAVLHLTGYRHQGFYGRSYKKT---ISMPDLLSRVKKVEAAETDVVTDQLSREGVEIITGTARFVESDSGDSRVSAMVLRSLGDEHEAASSPYRHVGADTPKSVISAERFLVACGTRPVRPPDIPFDGTHIFDSDQLLWGGITHIPRDLIVVGAGVIGMEYACMINVVPGTTVTVIDPRPTVLSFADNDVIENLQYTMRQNGARFLLNEHITRIEKIEKKDSNGGVKVIAHLASGKRVVGDALLYTMGRQGNTDSMDLARAGLEADKRGLLEVNDFYQTSNPRVYACGDVIGYPALASTSMEQGRRAALHMW 348
[Close]
BLAST of mRNA_L-elsbetiae_contig1019.236.1 vs. uniprot
Match: K3WL68_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WL68_GLOUD)

HSP 1 Score: 420 bits (1080), Expect = 1.950e-136
Identity = 221/366 (60.38%), Postives = 269/366 (73.50%), Query Frame = 3 
Query:  930 KASAHYDLVVVGSGPAAQKCAIESAKYGKSVCIVDKSSQIGGVCVHTGTIPSKTFREAVLHLTGWRHQGFY-GRSSQRARAAVAIPDVLARVHKVEMRETGVVRDQLQREGIELISGTARFLPGAEGEPHRVMVLRTSEKTEAKTSVYRHIEASLPSVTLSADRFLVACGTRPLRRPDVPFDGSRVFDSDQLLWGGVKVVPRDLIVVGAGVIGMEYASMINVIPGTTVTVIDPRDEVLGFADREVTQALCYSMRKNGARLWCLLACRLVKSVEKRDDGKVVAHLLSGKRVCGDALLYAMGRLGNTDSLNLQAIGVDPDERGLLNVDDFYRTAQSGVYACGDVIGYPALASTSMEQGVRAAHHMWNE 2024
            KAS H+DL+V+GSGPA QKCAI+SAK+GKSV I+DK    GGVCVHTGT+PSKTFREA LHLT +RH+ FY G+SS   R    I D+L RV KVE  ET + R QL R G+ELI+GTARFLP A    + + VL     T A T   RH  A +    L+AD+FL+A GTRP RRPD+PFDG  VFDSDQLLWGGVK VP+ LIVVGAGVIGMEYASM+++IPG  VT+ID R E+L  ADREV++ALCYSMR+ GAR +       +KSVEK  +G+V+ HL SGK + GD LLY +GR GNTD LNL A+G++ D+RGL+ VD+ ++TA   +YA GD IG+PALASTSMEQG  A+ HM  E
Sbjct:   45 KASEHFDLIVIGSGPAGQKCAIDSAKHGKSVAIIDKRDMHGGVCVHTGTVPSKTFREATLHLTAYRHRSFYDGQSSPTKR--FGIEDILQRVKKVEHAETDITRHQLLRNGVELINGTARFLPDA--NKNMIAVLSNDSYTTA-TDAKRHASADICKRVLTADKFLIAVGTRPARRPDIPFDGQAVFDSDQLLWGGVKTVPKRLIVVGAGVIGMEYASMMSIIPGMEVTIIDGRKEILDMADREVSEALCYSMRQTGARFFVE---ETIKSVEKV-NGEVIVHLNSGKTLVGDGLLYTLGRQGNTDGLNLPAVGLEADKRGLIQVDENFQTAVPHIYAAGDCIGFPALASTSMEQGRLASVHMRTE 401
[Close]
BLAST of mRNA_L-elsbetiae_contig1019.236.1 vs. uniprot
Match: A0A5D6XJI3_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJI3_9STRA)

HSP 1 Score: 420 bits (1079), Expect = 2.430e-136
Identity = 215/363 (59.23%), Postives = 267/363 (73.55%), Query Frame = 3 
Query:  930 KASAHYDLVVVGSGPAAQKCAIESAKYGKSVCIVDKSSQIGGVCVHTGTIPSKTFREAVLHLTGWRHQGFY-GRSSQRARAAVAIPDVLARVHKVEMRETGVVRDQLQREGIELISGTARFLPGAEGEPHRVMVLRTSEKTEAKTSVYRHIEASLPSVTLSADRFLVACGTRPLRRPDVPFDGSRVFDSDQLLWGGVKVVPRDLIVVGAGVIGMEYASMINVIPGTTVTVIDPRDEVLGFADREVTQALCYSMRKNGARLWCLLACRLVKSVEKRDDGKVVAHLLSGKRVCGDALLYAMGRLGNTDSLNLQAIGVDPDERGLLNVDDFYRTAQSGVYACGDVIGYPALASTSMEQGVRAAHHM 2015
            KAS H+DLVV+GSGPA QKCAI+ AK+GKSV ++DK   +GGVC+HTGT+PSKTFREA LHLT +RH+ FY G SS   R    I D+L RV KVE  ET + R QL R G+ELI+GTARFLP    + + V VL       A T   RH  AS+    L+AD+FL+A GTRP RRPD+PFDG  +FDSDQLLWGGVK VP+ LIVVGAGVIGMEYASM+N+IPG  VT+ID R E+L  ADREV++ALCYSMR++GAR +       +K VEK ++G+V+ HL SGK + GD LLY +GR GNT+ L+L A+G++ D+RGL+ VDD ++T    +YA GD IG+PALASTSMEQG  A+ HM
Sbjct:   41 KASEHFDLVVIGSGPAGQKCAIDHAKHGKSVAVIDKRDMLGGVCIHTGTVPSKTFREATLHLTAYRHRSFYDGHSSPGKR--FGIEDILQRVKKVEHAETDITRHQLLRNGVELINGTARFLPSP--DKNMVAVLSNDSYMTA-TDAKRHSSASICKRVLTADKFLIAVGTRPARRPDIPFDGETIFDSDQLLWGGVKTVPKRLIVVGAGVIGMEYASMMNIIPGMEVTIIDGRKEILDMADREVSEALCYSMRQSGARFFVE---ETIKRVEKAENGEVIVHLNSGKSLVGDGLLYTLGRQGNTEGLDLSAVGLEADKRGLIQVDDDFQTVVPHIYAAGDCIGFPALASTSMEQGRLASVHM 395
[Close]
BLAST of mRNA_L-elsbetiae_contig1019.236.1 vs. uniprot
Match: A0A8K1C723_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C723_PYTOL)

HSP 1 Score: 420 bits (1080), Expect = 2.750e-136
Identity = 215/363 (59.23%), Postives = 267/363 (73.55%), Query Frame = 3 
Query:  930 KASAHYDLVVVGSGPAAQKCAIESAKYGKSVCIVDKSSQIGGVCVHTGTIPSKTFREAVLHLTGWRHQGFYGRSSQRARAAVAIPDVLARVHKVEMRETGVVRDQLQREGIELISGTARFLPGAEGEPHRVMVLRTSEKT-EAKTSVYRHIEASLPSVTLSADRFLVACGTRPLRRPDVPFDGSRVFDSDQLLWGGVKVVPRDLIVVGAGVIGMEYASMINVIPGTTVTVIDPRDEVLGFADREVTQALCYSMRKNGARLWCLLACRLVKSVEKRDDGKVVAHLLSGKRVCGDALLYAMGRLGNTDSLNLQAIGVDPDERGLLNVDDFYRTAQSGVYACGDVIGYPALASTSMEQGVRAAHHM 2015
            KAS H+DL+V+GSGPA QKCAI+ AK+GK+V I+DK    GGVCVHTGT+PSKTFREA+LHLT  RH+ FY  +S + +    I D+L RV KVE  ET + R QL R GIELI+GTARFLP    +P + MV   S  T E  T   RH  A +    L+AD+FL+A GTRP RR D+PFDG  +FDSDQ+LWGG++ VP+ LIVVGAGVIGMEYASM+++IPGT VTVID R E+L  AD+EVT+AL Y+MR+ G R +       +K+VEK D+G+V+  L SGK + GD LLY +GR GNTDSLNL+A+G+ PD+RGL+ VDD +RTA   +YA GD IGYPALASTSMEQG  A+ HM
Sbjct:   45 KASEHFDLIVIGSGPAGQKCAIDHAKHGKTVAIIDKKDMHGGVCVHTGTVPSKTFREAILHLTAHRHRSFYDGAS-KPQKRFGIEDILQRVRKVENAETDITRHQLMRNGIELINGTARFLP----DPSQKMVAVLSNDTYETPTDTKRHKSADICKRVLTADKFLLAVGTRPARREDIPFDGKTIFDSDQILWGGIQSVPKRLIVVGAGVIGMEYASMMSIIPGTEVTVIDGRKEILDMADKEVTEALSYAMRQTGTRFYTE---ETIKTVEKADNGEVIVKLNSGKTIIGDGLLYTLGRQGNTDSLNLEAVGLTPDKRGLIQVDDNFRTAVPHIYAAGDCIGYPALASTSMEQGRLASVHM 399
[Close]
BLAST of mRNA_L-elsbetiae_contig1019.236.1 vs. uniprot
Match: A0A6A3FH22_9STRA (Putative soluble pyridine nucleotide transhydrogenase n=16 Tax=Phytophthora TaxID=4783 RepID=A0A6A3FH22_9STRA)

HSP 1 Score: 419 bits (1078), Expect = 5.000e-136
Identity = 216/363 (59.50%), Postives = 264/363 (72.73%), Query Frame = 3 
Query:  930 KASAHYDLVVVGSGPAAQKCAIESAKYGKSVCIVDKSSQIGGVCVHTGTIPSKTFREAVLHLTGWRHQGFY-GRSSQRARAAVAIPDVLARVHKVEMRETGVVRDQLQREGIELISGTARFLPGAEGEPHRVMVLRTSEKTEAKTSVYRHIEASLPSVTLSADRFLVACGTRPLRRPDVPFDGSRVFDSDQLLWGGVKVVPRDLIVVGAGVIGMEYASMINVIPGTTVTVIDPRDEVLGFADREVTQALCYSMRKNGARLWCLLACRLVKSVEKRDDGKVVAHLLSGKRVCGDALLYAMGRLGNTDSLNLQAIGVDPDERGLLNVDDFYRTAQSGVYACGDVIGYPALASTSMEQGVRAAHHM 2015
            +AS H+DL+V+GSGPA QKCAI+SAK+GKSV I+DK   +GGVCVHTGT+PSKTFREA LHLTG+RH+ FY G++    R  V   D+L RV KVE  ET + R QL R G++LI+GTARFLPG     H V VL ++E  E  T   RH  A +    L+AD+FLV  GTRP RRPD+PFDG  +FDSDQLLWG VK VPR LIVVGAGVIGMEYASM+ +IPGT VTVID R E+L  AD+EV++ALCYSM + G R    L    +KSVEK   G+V  HL SGK V GD LLY +GR GN + LNL+A+G+ PD+RG + VD+ ++TA   +YA GD+IG+P LASTSMEQG  A+ HM
Sbjct:   51 RASEHFDLIVIGSGPAGQKCAIDSAKHGKSVAIIDKRDMMGGVCVHTGTVPSKTFREAALHLTGYRHKAFYNGQAGPSKRFGVE--DILQRVKKVEDAETDITRHQLMRNGVQLINGTARFLPG---NNHMVAVL-SNESYETATDAKRHTSADICKRVLTADKFLVCVGTRPARRPDIPFDGETIFDSDQLLWGKVKTVPRRLIVVGAGVIGMEYASMMTIIPGTDVTVIDGRQEILNMADKEVSEALCYSMAQTGTRF---LVGETIKSVEKTPKGEVFVHLESGKTVVGDGLLYTVGRQGNVEGLNLEAVGLAPDKRGRIKVDNNFQTAVPHIYAAGDIIGFPGLASTSMEQGRLASVHM 404
[Close]
BLAST of mRNA_L-elsbetiae_contig1019.236.1 vs. uniprot
Match: A0A0P1AKW9_PLAHL (Soluble pyridine nucleotide n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AKW9_PLAHL)

HSP 1 Score: 413 bits (1062), Expect = 2.380e-133
Identity = 213/363 (58.68%), Postives = 264/363 (72.73%), Query Frame = 3 
Query:  930 KASAHYDLVVVGSGPAAQKCAIESAKYGKSVCIVDKSSQIGGVCVHTGTIPSKTFREAVLHLTGWRHQGFY-GRSSQRARAAVAIPDVLARVHKVEMRETGVVRDQLQREGIELISGTARFLPGAEGEPHRVMVLRTSEKTEAKTSVYRHIEASLPSVTLSADRFLVACGTRPLRRPDVPFDGSRVFDSDQLLWGGVKVVPRDLIVVGAGVIGMEYASMINVIPGTTVTVIDPRDEVLGFADREVTQALCYSMRKNGARLWCLLACRLVKSVEKRDDGKVVAHLLSGKRVCGDALLYAMGRLGNTDSLNLQAIGVDPDERGLLNVDDFYRTAQSGVYACGDVIGYPALASTSMEQGVRAAHHM 2015
            +AS H+DL+V+GSGPA QKCAI+SAK+GKSV I+DK   +GGVCVHTGTIPSKTFREA LHLTG+RH+ FY G+     R  V   D+L RV KVE  ET + R QL R G++LI+GTARFLPG++   H + VL ++E  E  T   RH  A +    L+AD+FL+  GTRP RR D+PFDG  +FDSDQLLWG VK VPR LIVVGAGVIGMEYASM+ +IPGT VTVID R E+L  AD EV++ALC+SM + G R    L   ++KSVEK   G+V  HL SGK V GD LLY +GR GN + LNL+A+G+ PD+RG + VD+ ++TA   +YA GD+IG+P LASTSMEQG  A+ HM
Sbjct:   31 RASEHFDLIVIGSGPAGQKCAIDSAKHGKSVAIIDKRDMLGGVCVHTGTIPSKTFREAALHLTGYRHKAFYNGQGGPSKRFGVE--DILQRVKKVESAETDITRHQLLRNGVQLINGTARFLPGSK---HMIAVL-SNESYETATDAQRHSSADICKRVLTADKFLLCVGTRPARRADIPFDGETIFDSDQLLWGKVKSVPRRLIVVGAGVIGMEYASMMTIIPGTDVTVIDARKEILNMADNEVSEALCFSMAQTGTRF---LTGEVIKSVEKSAMGEVFVHLESGKTVVGDGLLYTVGRQGNVEGLNLEAVGIVPDKRGQIKVDNNFQTAVPHIYAAGDIIGFPGLASTSMEQGRLASVHM 384
[Close]
BLAST of mRNA_L-elsbetiae_contig1019.236.1 vs. uniprot
Match: A0A3R7H1X6_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7H1X6_9STRA)

HSP 1 Score: 407 bits (1045), Expect = 5.070e-131
Identity = 208/367 (56.68%), Postives = 265/367 (72.21%), Query Frame = 3 
Query:  930 KASAHYDLVVVGSGPAAQKCAIESAKYGKSVCIVDKSSQIGGVCVHTGTIPSK--TFREAVLHLTGWRHQGFY---GRSSQRARAAVAIPDVLARVHKVEMRETGVVRDQLQREGIELISGTARFLPGAEGEPHRVMVLRTSEKTEAKTSVYRHIEASLPSVTLSADRFLVACGTRPLRRPDVPFDGSRVFDSDQLLWGGVKVVPRDLIVVGAGVIGMEYASMINVIPGTTVTVIDPRDEVLGFADREVTQALCYSMRKNGARLWCLLACRLVKSVEKRDDGKVVAHLLSGKRVCGDALLYAMGRLGNTDSLNLQAIGVDPDERGLLNVDDFYRTAQSGVYACGDVIGYPALASTSMEQGVRAAHHM 2015
            +AS H+DL+V+GSGPA QKCAI+SAK+GKSV IVDK   +GGVCVHTGT+PSK  TFREA +HLTG+RH+ FY   G  S+R    + + D+L RV KVE  ET + R QLQR G++LISGTARFL G   + H + VL ++E+ E  T   RH EA +    L+AD+FLV  GTRP R PD+PFDG  +FDSDQLLWG VK+VPR LI+VG GV+GMEYASM+ +IPGT VTVID R E+L  AD+EV++ALCYSM + G R    L    +K VEK   G+V+  L SGK V GD LLY +GR GN + L+L+++G+ PD+RG + VD+ ++T    +YA GD+IG+P LASTSMEQG  A+ HM
Sbjct:   51 RASEHFDLIVIGSGPAGQKCAIDSAKHGKSVAIVDKRDMLGGVCVHTGTVPSKASTFREAAMHLTGYRHRAFYNGHGGISKR----IGVEDILQRVKKVEAAETDITRHQLQRNGVQLISGTARFLAG---DSHMLAVL-SNEEYETATDAKRHTEADICKRVLTADKFLVCVGTRPARHPDIPFDGETIFDSDQLLWGKVKMVPRRLIIVGGGVVGMEYASMMTIIPGTDVTVIDGRKEILNMADKEVSEALCYSMAQTGTRF---LVGETIKKVEKNSKGEVLVRLDSGKTVVGDGLLYTVGRQGNVEGLHLESVGIHPDKRGRIKVDNNFQTEVPHIYAAGDIIGFPGLASTSMEQGRLASVHM 406
[Close]
BLAST of mRNA_L-elsbetiae_contig1019.236.1 vs. uniprot
Match: M4BCY3_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BCY3_HYAAE)

HSP 1 Score: 407 bits (1045), Expect = 5.230e-131
Identity = 211/371 (56.87%), Postives = 266/371 (71.70%), Query Frame = 3 
Query:  930 KASAHYDLVVVGSGPAAQKCAIESAKYGKSVCIVDKSSQIGGVCVHTGTIPSKTFREAVLHLTGWRHQGFYGRSSQRARAAVAIPDVLARVHKVEMRETGVVRDQLQREGIELISGTARFLPGAEGEPHRVMVLRTSEKTEAKTSVYRHIEASLPSVTLSADRFLVACGTRPLRRPDVPFDGSRVFDSDQLLWGGVKVVPRDLIVVGAGVIGMEYASMINVIPGTTVTVIDPRDEVLGFADREVTQALCYSMRKNGARLWCLLACRLVKSVEKRDDGKVVAHLLSGKRVCGDALLYAMGRLGNTDSLNLQAIGVDPDERGLLNVDDFYRTAQSGVYA---------CGDVIGYPALASTSMEQGVRAAHHM 2015
            +AS H+DL+V+GSGPA QKCAI+SAK+G SV IVDK   +GGVCVHTGT+PSKTFREA LHLTG+RH+ FY   +  ++  V + D+L RV+KVE  ET + R QL R G++LI+GTARF+PG     H + VL ++E  E  T   RH  A++    L+AD FLV  GTRP RR D+PFDG  +FDSDQLLWG VK VPR LIVVGAGV+GMEYASM+++IPGT VTVID R E+L  AD+EV++ALCYSM + G R    L   ++KSVEK   G+V  HL SGK V GD LLY +GR GN + LNL+A+G+ PD+RG + VD+ ++TA   +YA          GD+IG+PALASTSMEQG  A+ HM
Sbjct:   48 RASEHFDLIVIGSGPAGQKCAIDSAKHGYSVAIVDKRDMLGGVCVHTGTVPSKTFREAALHLTGYRHRAFYNGQAGPSKR-VGVEDILQRVNKVEKAETDITRHQLMRNGVQLITGTARFMPG---NSHMIAVL-SNESYETATDAKRHSSANICKRVLTADNFLVCVGTRPARRADIPFDGETIFDSDQLLWGKVKAVPRRLIVVGAGVVGMEYASMMSIIPGTDVTVIDGRKEILEMADKEVSEALCYSMAQTGTRF---LVDEVIKSVEKSAKGEVGVHLESGKTVVGDGLLYTVGRQGNVEGLNLEAVGLAPDKRGRIIVDNNFQTAVPHMYAQSRLIADQNAGDIIGFPALASTSMEQGRLASVHM 410
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1019.236.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKJ5_ECTSI2.310e-24290.10Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZER9_9STRA5.510e-15864.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FHH4_ECTSI1.740e-13662.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
K3WL68_GLOUD1.950e-13660.38Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A5D6XJI3_9STRA2.430e-13659.23Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A8K1C723_PYTOL2.750e-13659.23Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6A3FH22_9STRA5.000e-13659.50Putative soluble pyridine nucleotide transhydrogen... [more]
A0A0P1AKW9_PLAHL2.380e-13358.68Soluble pyridine nucleotide n=1 Tax=Plasmopara hal... [more]
A0A3R7H1X6_9STRA5.070e-13156.68Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
M4BCY3_HYAAE5.230e-13156.87Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1019contigL-elsbetiae_contig1019:578..10243 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score694.5
Seed ortholog evalue2.9e-197
Seed eggNOG ortholog2880.D7FKJ5
Hectar predicted targeting categorymitochondrion
EggNOG free text desc.dihydrolipoyl dehydrogenase activity
EggNOG OGsCOG1249@1,KOG1335@2759
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons10
Model size2024
Cds size1209
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815249.3331203-CDS-L-elsbetiae_contig1019:577..7421622815249.3331203-CDS-L-elsbetiae_contig1019:577..742Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1019 578..742 -
1691682795.2231255-CDS-L-elsbetiae_contig1019:577..7421691682795.2231255-CDS-L-elsbetiae_contig1019:577..742Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1019 578..742 -
1622815249.3446674-CDS-L-elsbetiae_contig1019:2578..27071622815249.3446674-CDS-L-elsbetiae_contig1019:2578..2707Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1019 2579..2707 -
1691682795.2354841-CDS-L-elsbetiae_contig1019:2578..27071691682795.2354841-CDS-L-elsbetiae_contig1019:2578..2707Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1019 2579..2707 -
1622815249.354794-CDS-L-elsbetiae_contig1019:3156..31841622815249.354794-CDS-L-elsbetiae_contig1019:3156..3184Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1019 3157..3184 -
1691682795.2446513-CDS-L-elsbetiae_contig1019:3156..31841691682795.2446513-CDS-L-elsbetiae_contig1019:3156..3184Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1019 3157..3184 -
1622815249.365731-CDS-L-elsbetiae_contig1019:3298..34181622815249.365731-CDS-L-elsbetiae_contig1019:3298..3418Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1019 3299..3418 -
1691682795.2548282-CDS-L-elsbetiae_contig1019:3298..34181691682795.2548282-CDS-L-elsbetiae_contig1019:3298..3418Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1019 3299..3418 -
1622815249.3775573-CDS-L-elsbetiae_contig1019:4426..44851622815249.3775573-CDS-L-elsbetiae_contig1019:4426..4485Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1019 4427..4485 -
1691682795.2673714-CDS-L-elsbetiae_contig1019:4426..44851691682795.2673714-CDS-L-elsbetiae_contig1019:4426..4485Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1019 4427..4485 -
1622815249.3887694-CDS-L-elsbetiae_contig1019:5420..55801622815249.3887694-CDS-L-elsbetiae_contig1019:5420..5580Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1019 5421..5580 -
1691682795.275349-CDS-L-elsbetiae_contig1019:5420..55801691682795.275349-CDS-L-elsbetiae_contig1019:5420..5580Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1019 5421..5580 -
1622815249.4012299-CDS-L-elsbetiae_contig1019:6196..63511622815249.4012299-CDS-L-elsbetiae_contig1019:6196..6351Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1019 6197..6351 -
1691682795.2831316-CDS-L-elsbetiae_contig1019:6196..63511691682795.2831316-CDS-L-elsbetiae_contig1019:6196..6351Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1019 6197..6351 -
1622815249.4202108-CDS-L-elsbetiae_contig1019:7057..71691622815249.4202108-CDS-L-elsbetiae_contig1019:7057..7169Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1019 7058..7169 -
1691682795.290692-CDS-L-elsbetiae_contig1019:7057..71691691682795.290692-CDS-L-elsbetiae_contig1019:7057..7169Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1019 7058..7169 -
1622815249.4323993-CDS-L-elsbetiae_contig1019:7702..78151622815249.4323993-CDS-L-elsbetiae_contig1019:7702..7815Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1019 7703..7815 -
1691682795.298325-CDS-L-elsbetiae_contig1019:7702..78151691682795.298325-CDS-L-elsbetiae_contig1019:7702..7815Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1019 7703..7815 -
1622815249.4447207-CDS-L-elsbetiae_contig1019:9260..94281622815249.4447207-CDS-L-elsbetiae_contig1019:9260..9428Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1019 9261..9428 -
1691682795.3113053-CDS-L-elsbetiae_contig1019:9260..94281691682795.3113053-CDS-L-elsbetiae_contig1019:9260..9428Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1019 9261..9428 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815249.4587994-UTR-L-elsbetiae_contig1019:9428..102431622815249.4587994-UTR-L-elsbetiae_contig1019:9428..10243Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1019 9429..10243 -
1691682795.3193395-UTR-L-elsbetiae_contig1019:9428..102431691682795.3193395-UTR-L-elsbetiae_contig1019:9428..10243Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1019 9429..10243 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1019.236.1prot_L-elsbetiae_contig1019.236.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1019 578..9428 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1019.236.1

>prot_L-elsbetiae_contig1019.236.1 ID=prot_L-elsbetiae_contig1019.236.1|Name=mRNA_L-elsbetiae_contig1019.236.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=403bp
MLGRRHSGLGEAFSRGLRRRAPAPCGTAPSSTQAAALAKASAHYDLVVVG
SGPAAQKCAIESAKYGKSVCIVDKSSQIGGVCVHTGTIPSKTFREAVLHL
TGWRHQGFYGRSSQRARAAVAIPDVLARVHKVEMRETGVVRDQLQREGIE
LISGTARFLPGAEGEPHRVMVLRTSEKTEAKTSVYRHIEASLPSVTLSAD
RFLVACGTRPLRRPDVPFDGSRVFDSDQLLWGGVKVVPRDLIVVGAGVIG
MEYASMINVIPGTTVTVIDPRDEVLGFADREVTQALCYSMRKNGARLWCL
LACRLVKSVEKRDDGKVVAHLLSGKRVCGDALLYAMGRLGNTDSLNLQAI
GVDPDERGLLNVDDFYRTAQSGVYACGDVIGYPALASTSMEQGVRAAHHM
WNE
back to top

mRNA from alignment at L-elsbetiae_contig1019:578..10243-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1019.236.1 ID=mRNA_L-elsbetiae_contig1019.236.1|Name=mRNA_L-elsbetiae_contig1019.236.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=9666bp|location=Sequence derived from alignment at L-elsbetiae_contig1019:578..10243- (Laminarionema elsbetiae ELsaHSoW15)
CATCCCCAGAGAGTTATTCTCGTGGTGAGTGAGAGCGAGGTTTCTTTGAA
TAATATCTTTCCTCGAAGAGCAACATAAACGGCACGCGCGGAAATTTTGC
CAATCTTCAAAGTCCACATCCATCCGAGACAGACATAATGTGCTGTCACG
CTCTCTCCTTTTCCATCCAGTGCATGCCTCTCTTGATGTGCAGGTTCTGC
GTGGTGGCTGAATTTTTCGACACGGCTGTCGCACTGCCGTTAACCTTGCT
TGGTTTAAGGACTATCGTGGCGATATTCGTAATATTCCCTCTCACCTCGT
TGCGCAGTTGTTGTATAGTCTAGGAGTAGATACGCCGGTAAAGATGCGGC
TCCCTTGTCGTTGCGTACGACGCGCACACTAGCTCCTGATAGTGTGGCGC
CCGGATTCCCTTCCGTCTCTATGTGCGTGTATTATGTGTGTGTTTGCTTG
AAACCTCAAACGTCTGCATAGTTAATTTTGCCCTCATACTTCAACTTGTC
CCGCACATCCGCGCCTCATGAGCTTCCCATGTACTACGTAGCCGACACCG
AACGTGCCTGCCTGGGTGCTAACTAAACGTTCCACTTCACACACCAAAAT
AAAGTCTGTCTGAGGTGGCCCAGGGGCCTTGCGGGTCGATAATTTCTCGC
AGCAACAGGTTGCAGGCTTCTATATGAGGCAAATGAGGGTCCGATGCGCG
CGCAAAAAAAAAAAAACACTATTGTAAACTTTCAGGGAGCAACTGGCGAC
GGGACCGACTCGGCCTTGCACAGGTTACCGCACTCTCTCTACTTTTAAAT
AGTCCGCCTCGAGGCATGTTGGGCAGGAGGCACTCGGGGCTGGGTGAGGC
CTTCAGCCGGGGACTGCGGAGACGCGCGCCTGCGCCGTGCGGGACGGCAC
CATCTAGCACCCAGGCGGCAGCTCTGGCGAAAGCTTCAGCGCACTACGAC
CTGGTCGTGGTCGGATCCGGGCCGGCTGCGCAGGTACCTATTGTATCATG
CAGGCGGTGCGTCTGCAGATGCACTACGACTGAGCAAGCAGCGTGGCTCT
CGCAGCAGCTTGTTTGGTCGTGATGATTCGAGCAGCAGCAGCAGCAGCAG
CTTCTGCGAAAAAAGGACCCCAACGCCCATGCTATTTAATGAAGCTGTTG
CAGGTGTCTGTACGGTATGTGACTGGCGGAATTCCGGACATTTTCAAGTT
TCAAGCATTGCATCACCACATGTGTAGTAAGCCTTTGAACACACGCGAAC
CACTCCGTCACCTCAAATCGATAGAAAATCCAACTGTGAGCCGCCCCCCC
CAACCCCGCCCTTTTTTCCAGTGTTATTGGAACTACCTATATTTTAAGGG
GGCGCATTCTGTCACGGTCAAAGGCACAGGGCCTCAGTATACCCACGCAT
GAAGAAGCCGAGATCTCAGCTTGCAGGAAGTGATCCAAAACGCGACTTGA
GGCTGTGTAGTAGAGGTGTGTGGCTACAGAGCGGACCAAAAATCTAGGTG
GTAGCTTCTGCTTGGCATGTAGAGGTGCCATCGCAAAAAAATGATATAGG
GAAGAGAGACGTAGAGTCGAAAAAAGAGAGCCAGCTGCGAGACAGACGAG
CACGATTCCTATACGAAACGCAGCTTCTTGATCCCTGAAGAGATCCATCG
CAAGACCACGCACGTCGGCAAGAAAAGGGTCTCAGATATGCAGAGCACCC
ACTAAAATGAGCTAACCCCGTTGCGTGGCAATTAGACGAGCTGCTGCCGT
CTGCTGCTGCTGGCCTGGCCGAGGGCACCAACGCGTGCGGGAGGGCAGTT
CTGATTCGACACTCACAGAGCGATTCTGAGTTTAAACTCTTCACCAGCAC
TAGCTATGAGCAACATATCGCACCACCTCTAGTTTGTTTGGTCTGGGAGG
GGTTATGTGAGCTCCTAGGGCTGGCGCAGTGGTCTCAGCTGGGCCACGAG
AGGGCGGGGGCTTTTGGTGGGGGGGTCTCTAATGCGCGTGCTTTTTGTCT
GCGAGTCCCCGACGAACTTGTGATCGGTGTAAATCATCCTCACGCCGCGG
CTTGAGCATCGATTCGCTTCGTTCTTTTTCGTACACCCTCGACAAGTACA
CGAGCTACAGACCTGTTCTTTCCTCACCACCAACACGACACTCTGCGGCG
AGAACTCGAAGTAAAGGAGCGCAACAAGTGCCCCCTCAAAATCTAGTTGT
TTCCTGAGGGACTGACTGGCCTGTTAGCACCCACACGTGGATCGGGAGCA
TCCGACACCACGATCTTTAGCGCTTCTTGGCGAAGCCAAACAATGCTTTG
CGCTCGACTGGCTCAACAAAACAAACGCCTCTTTGCTCGTTGTATATACC
CGCCGAGACGGACGTACCCTCTGACCGCGGATAGGTTCTACGCTGCCCCG
CATTTCCGCTCGCCCATTCCTTGACCAGAAATGTGCCATCGAAAGCGCAA
AATACGGCAAGAGCGTCTGTATCGTCGACAAGTCGAGCCAAATCGGAGGA
GTGTGTGTCCACACGGGTACGATTCCGAGCAAGACGTTCAGGTGAGACTT
GCTGCCCTCGGTTGTTGCTTGGTTTTGCCAGAATTCCCCGTCGTCACAGC
AGTGATGAAGATTTGTGTGTGTGTCGTTTTTTGGAGTCCGCGCGTTGCTG
ACAGCCTCTCTACTTTTTGTGATGGTGTTTCATGGGCAACAAGAAGCCCA
AGCTTGTTTTGGGGCGAAATCGTTCTTCCGAAAAATGTGTGTGTTGTTTA
TATATGTATGTATAGCTATCTACATACCGTCACGAAATGGCTTCCGGCAA
TAGACGACAGCAGCTGGATAGCTCGTGTCTTACTCGTGGATGCCCTCCAG
TGCCCGCGAACTTCGCTCCCGCTCGGTTTTTGCATGAGCTGTATGAGCCC
GAACGTCGACACCTTGCGCCAACCGATATCCGGACTTCCGCCGTGTTTCG
CTCTCTCAAACCTCGTCGACGCTGATACTGCTGTCTGTCTTTCTGGTGGT
GGGTGGTGGCGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTG
CTGCTGGCGGTGGTGATGATTCAGGGAGGCCGTCCTGCATCTAACGGGGT
GGCGGCATCAGGGCTTTTACGGCCGGTCTAGCCAGAGAGCGAGGGCCGCC
GTGGCCATTCCCGATGTCCTTGCCAGGGTGCACAAGGTATGTGCGATGAA
GATGTAAACAAATGTAAATAGTGACGGCATACCCCTGCCTATAGTTTTCA
CAATAACGGCATGCTTTTTTTTTGGTTTCACCAGCGTCAAATCAGGCGTG
TTTTTTTCTCGTATGCATGCAGCAGCAGCAGCAGCAGCAGCAAACAGCAG
TAGCAAACGGCAGTAGGTTTGCCGAAACGACGATAACCCCTAATCGACGC
TTTCGTGCCGCTGTTCGTCGCTGGTTTTCTCAGGCGTGTTAGACGAACTA
CCCGGCTTTTGTTTCCGCCTGTGTATGTAGACTGAGTTAACGAGGAACAT
ATTGAGATCGACAGGGTTTTTGTGTGGGTAGGGCATTCGGTTTTGGTGGA
TGATATGTATACTGAATCAACCAGGAACATGTTGGGGATCGACGGGGTTT
TTCTGTGGGTGGGGCGTTCGATTTTGGTGGATGATGCCGGTGGCGGTTTT
GATTCGTGCGATGCTTCTCCCGGTGATACTTCTAAACTGGATAAACAAAC
AGTGGGAGCTGTATTTGTCCGATCGTGGGGCCGGTTCATGGTTATCTCGC
TCTTCTGTCTGGATGACTGGGAGACGCGTAGTCGACACTACCACACACAA
CACACACACACACACACCACACATGTATCAACGAACGGTACCGACTCGGA
AACGAACAGCTGCGCTGAATTCTGAAGGTGGGGTCGTCGCAGGTGGAGAT
GAGGGAGACGGGGGTGGTGCGAGACCAGCTGCAGCGCGAGGGGATCGAGC
TGATCAGCGGGACGGCTAGGTTCTTGCCGGGGGCGGAGGGGGAGCCCCAC
CGGGTGATGGTTCTGCGGACGAGCGAGAAGACCGAGGCGAAGACAAGGTC
AGTGAGCTATTCAGCTGAATAGAACAGGTCCGCAGATACCTACAGCATAC
TAACCCTCATGGTATGTACCGAGCTTGACACCGCGCCAAAATCCAAGTGG
GCGATGATCGAAATGGCATACATACGTGTTGGGAGATGGAGGGGCGGGAG
AGAGAGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGGGGGGGGGGGGGTGTCGTGTTTGTCGTGTCGTCGTGCTAAAAA
TGCGCGCACGCACCGCGCGATCGGATGAGTGTCCGCCGTAAGGTCTGCAC
CCGTTCTTGCCTTGTCGTAGATACCAGAGATGCTCTTTTATAAGAGTGTA
TGTCTGTGTGTGTGTGTGGCGTGTGTGTGCGTGGGTGGACGGGCGTCTTG
ACGGCAGTGGTGGGAGGACGCCTGCTGGTGGATCTCGAACCGCCGCTTCC
CCTCCCCGCCCGCGCTGCCTCTCTCCGCCCCGACAAATGACAACCGACGG
CGACGGCGATGGCGATCACGACGGTTACGACGGTTACGACCATAACGAAC
GCAAACATAAAAGCGTGTACCGGCACATCGAGGCGTCTCTGCCCAGCGTT
ACCCTCTCGGCCGACCGGTTCTTGGTGGCCTGCGGGACGAGGCCGCTCCG
GCGGCCGGACGTGCCCTTCGACGGATCTCGCGTCTTCGACAGCGACCAGT
TGCTGTGGGGAGGGGTCAAGGTGGTGAGGCCGCCACCATGCCATACCGTC
GTACCGTGCCGTGCCGTGCACATGTGTGCACGCACACATCACACATAAAC
TTGTGGTGCAGTGTCTCTGGGGAGCCGCGATGTTGTGCTTCCGGTTGCGC
GTGCGTCGCCAGCACGCAACATTTCTTGTCCTATCCGTGTCCTATGTAGG
TTCCTTTGATCAAGGTGGAAATATCCCCCGGCGATACTCTCGCAAAAGCA
ATGTAAGCATGCGTCTAGAAAAAAAAACTAGGGGCGAATTTAATCAAGTA
TTGTGATGGTCTCTTATCATACTAAATAGCATGGCCCCGTCTGGCGGTGC
TGTCGTGGAATCCTTCTAAAGTACGTCCATCACGCCGGGTGATGTGCAGC
GCCATGTGTGGGCCGGTCGCCCCGGTGGTCTAGTTGTTAACTTCGAAAAC
AGGCAGGCAGGTCGTGAGTTCGAATCTCAGCGGAAGAGACTTTTTCTTGC
GAAGTGAGTTTTTTCTCTCGCTTCCGCCCCTGTCAGTGGATAGCGCTTAG
CGTGTGTACACAAACTTCGACCTCACCGTCGACGAGGGAAAGGGACGGCT
GAACCCTTCTCGCGACAAAAATCTTAGGCAAGCACCGTAGACGGGGGGAG
TGAGGGCCTTGGGGAAAAGAACCCTTCTGTGTGACCACGGTTCAGTACTC
TGGCAAGATGTCCTCGTGCCAGGGAGCCCATCGAGCACTGGAAATAAATG
TCAAGAAAAAAAAATACATATAAGTATATATCCGTAGAAAGAGTTTGCTA
CACCAAAAACTGTTGCAGTACTACAGGGCTCTCCTCTGACTCATACCGAG
CGGTCCCCTTCGGTTGGCTGTATATTCCATCTTTTTCAACGGCCCACAGA
CCACGATCCTTTTGGTTCCAAACGATACTCAGCGGCTGTTGCTTCTACCA
CGACTCAGGTGCCTCGGGATCTTATCGTTGTCGGAGCTGGGGTGATCGGA
ATGGAATACGCGAGCATGTGAGTGGCGCGAGAGACCGATAATATATATTT
TCATATATGTATAATACCATATATGCATATTTTGTCTTGGCGTGCACGAG
CGTTGGTGGGAAAATGCTTTCCTTTGCGTATATCTTTACTGTGTCTGATG
TTGCTGTTGTGGCTTCAGATGAAAATCGCTTCGACCTTTGACAGCCCAGT
ACGCCCTTTTTACCTGACTGACCAACCAGTTAATAGTTAAAATACGATCC
TTATTATTGTACGGTTACAGCAGTCTTAACATACTGAGTAAATACTACCT
CTCGACATTTTGTATGTGTCATACGAAAGTTATCATACCTACACTACTAT
TTCCCAACACATCATTTCCCAATTCTGACTATTGTCCTATCATACCACTA
ATATTGAATTTTCTCCTCTAAAGCAGTAACCCACATATATTAAACCAGCA
TTTTGATTTAGTTCAACAATGCGATGTGTTCCTATTTTGAAGTAGATGAA
AAATTATGGCATCACGGTGGGCTCTACCCGCTGGAAAATTGTTGGCCGAC
CTCGCAAATCTAAATCTTTGCAGGGGAGATGTTGAATTCTTCTAATATTT
AGGTTGTTTTTTCTGCTCGCTTCGCCAAATATTACGTCTCTGTATGGAAT
ACCGTTTGAACCCCATATCGGGTCTTTGCTCTAGTATGGGTTAGGTTCCA
TCTTTGATTCTTTGTTTTATTTTAATAAATAACCGCTGTCTCCTGCCTCC
TCTCCCGTATTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTC
TCCGTCTCTGACCTGCCTTCTCTCTCCTATTCCCTCTTGCCTCCGCGTGC
CAGGGATAACACATGAATGGCATTTACACGGTGCACACACCACGCCCTCC
TTCATCGGCGTATCCATGCATCAAGCACACCAAACACCTGACGCTCTCGT
GGGTGTCCCGTTCGTAGTTCGCTCGAACCTCAGCCCCCCCCCCCCTCCCC
CCCTCCTCCTCCTTCTTCTCGTCAGGATCAACGTCATCCCGGGTACGACG
GTTACAGTCATCGACCCCAGAGATGAGGTGCTCGGGTTCGCTGACCGGGA
GGTGACGCAAGCGTTGTGCTACTCCATGCGGAAGAACGGCGCTAGGTTTC
TCCTCGGAGAAAAGGCGAGGAACCCTCTTGCGCGGCTGAACTAACACTAT
CTCCAGAAAGTCGTCCGCCCCCCCCGGCACCCCGGACGGTGCTGTGTGCC
TTGCCAAAGGCTGTGGTGCCTGCTGGCTTGTCGGCTTGTGTGGTATGTGT
ATACTGCTCTGTTCGGCGTTTCTTTTGTGCCCCGACTCCAAGCAGCGTTT
TTTGTGCGTCCCACTTTCTCCCCCTCTCGTTGCTGTTCTCGCCGCTGAAG
AGAGGAGGGGGGCCCGTATTCTGACCCAACGAATGAGTGTACGTGTGTAC
GTTTTTATTGACTGAATTTTGCATTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCCTGCGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCTCTTTTCTTTCTCTCTTTTCTCCCCGTGCCGGCGTGGAGAGTGGNNN
NNNNNNNTTTGTGTTTTTTTTTTTCTTTTATTTGGCCTTCACTCTCCTTC
TCTCTTTCCCTCCCCCTCTCTCCCCCCCCCCCCCCCCCCCCCCCCCTTCT
CTCTCTCCCCCTCTGTTTTTTGTGCCTCTATTTCAGGTGAAGAGTGTGGA
AAAAAGGGATGACGGGAAGGTGGTGGCGCACCTACTGAGCGGCAAGCGGG
TTTGTGGCGATGCTCTCTTGTACGCCATGGGCCGTCTCGGCAACACCGAC
TCTCTAAACCTGCAGGTGAGGATAAGGGAGACGTTAATTCTTTGACCGCT
CCATGTATTCTCTACGCCGTAGTCTTCTCTCTCGCTCCCTCTCTCTCTCT
CTCTCTCTCTCTGGCTACGCTTGAGCCACTGCGATCGAGCCGCGATGAAA
GCCAATCGCATGAGTTCATCTCTCTGTGCACGCCCCCTCCTGCCTCTCTT
CTGCGGTACACCCGTACGTTACACTTGCCCTCCCGCCGCTTGACCCTTGG
AAAGTTTTTGCGGGGACGTGTTTACACCGCACGCAGTAGACTTAAGGGGG
TGCAGACAAGGAGCGAGGAGGGGACCCTCACACAAAATAATAGACAAACA
CGAAATCGAGCCCCCTTTTGCCTATTCAAAAACCAAGTTAAAACTGGCTG
AACCGCTTAGCTTCTAAACAACAAGGTTCGGGCTCAGAGTATCATTCGGC
TGGCAGGCTGTATGAGTAGAGGACGCCATGGGGAAGGGTGTGATGCGTGT
TGGCATGTGCAGATCTGCTGCTGGGGACTAGTTATCGAGCACCGCAGCAG
TAGCTGCAGAACTCCGCAATCCGGAACAGCGCTAGCAAACATCCACTGCT
GTGCTCGCCACCGCAGACTCCAACCTCCACAACCACGGGTCTCCGGCAAT
AGCTAGTGGTATGAGCTACTGTGGACCCGTAATTCATGAGGTTGGGATCT
GTAGCGGAGGGCACACCAGTGGAAGATGTTTGATTTCGGCCAAGATTTAC
AGGCTTTTGAGCTACTACCGCGACCCTCAATAACTAGCCCCCAGCAGCAG
ACCTGCACATGCCAACACGCATCACACCCTTCTCCATGGTGTCCTCTACT
CAAGCAGCCTGCCAGCCGAATGATACTCCAAACTCCTTGCCGTTTCAGAA
CGCTCATAGCATTGCCTGTGTTGTCTTGATTTTAATGGGTGCAGACATTT
TTAAGCTTGATTTTAGAGTTCGTGGTTGGAGGTAGACCATGTGATGTGTA
TGCGAAGAACAGCCCCGCTCCCGCTGGGTGAGCGAACCAACAGAGTTGTT
CTTGCGCAACGCTTCTCTACTGGTCTGGTGGATCTGCTCTTGTGTGGTTG
ATGTGTGCTTTCTCGGGGCATTTTCAAATATTGGACCAACTCCAAAAATC
GTTGGCACCCACCTCCCTAAACACGCTGCATTGAATCAACATGGGTGAAC
TATTATATACTTCGTTCATGTTTCAAATGGCTGGGTTGTGTGTGTGTGCG
TGTGTGTATTGGGCGAGGGGGGGGGGGGGGGGGGGGGCGGTGTCTCGTCG
GTAAACGGGGCGGGGCCACACCACAACTCTGGGGGTGCGGCGTAGACACA
CAGAGCAGTNNNNNNNNNNTGTGTTGTATGTTTTTTTTTGCGTGTGGTTG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGGGGGGGGGGGCGTGCAGATGCTTCGACAAGAGGCGCAGGCAGC
AGTATCCACCTTGTTCGGCGCGGGCAAATACAACACGTCACTTTCTTTGG
TTCTTGGTCGGTGCATCAATACCAATGCGCTATTGTATTTACACACGCAA
ATCCCTGCTGAAGGAGAGAGCTGCACGGATACATATATACATACATACAC
ACACAGGCAAAAATCTTAAAAATCTCGTCACAGTCACCTCTCTCCCTCCC
GGCCTCCCTGCCTCCGCAAGGCCGCGACCAGCGTTTCATCGAAAACCCTC
TGTTTTTTTTTTCGCTCCCCTTTTGCCCGCTCGGTGTCAACACTTACAAA
CGGTGTGCGCGCGCACGCACGCGCCACTGCTTTGTTTCGGTTCGGGATCA
GGCGATCGGGGTCGACCCGGACGAGCGCGGGTTGCTCAACGTGGATGACT
TCTACCGGACGGCGCAGTCAGGAGTGTACGCGTGCGGAGACGTGATTGGG
TACCCGGCGCTTGCGAGCACCTCCATGGAGCAGGGCGTGCGAGCAGCGCA
CCACATGTGGAACGAA
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig1019:578..10243-

>mRNA_L-elsbetiae_contig1019.236.1 ID=mRNA_L-elsbetiae_contig1019.236.1|Name=mRNA_L-elsbetiae_contig1019.236.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2418bp|location=Sequence derived from alignment at L-elsbetiae_contig1019:578..10243- (Laminarionema elsbetiae ELsaHSoW15)
ATGTTGGGCAGGAGGCACTCGGGGCTGGGTGAGGCCTTCAGCCGGGGACT
GCGGAGACGCGCGCCTGCGCCGTGCGGGACGGCACCATCTAGCACCCAGG
CGGCAGCTCTGGCGAAAGCTTCAGCGCACTACGACCTGGTCGTGGTCGGA
TCCGGGCCGGCTGCGCAGATGTTGGGCAGGAGGCACTCGGGGCTGGGTGA
GGCCTTCAGCCGGGGACTGCGGAGACGCGCGCCTGCGCCGTGCGGGACGG
CACCATCTAGCACCCAGGCGGCAGCTCTGGCGAAAGCTTCAGCGCACTAC
GACCTGGTCGTGGTCGGATCCGGGCCGGCTGCGCAGAAATGTGCCATCGA
AAGCGCAAAATACGGCAAGAGCGTCTGTATCGTCGACAAGTCGAGCCAAA
TCGGAGGAGTGTGTGTCCACACGGGTACGATTCCGAGCAAGACGTTCAGA
AATGTGCCATCGAAAGCGCAAAATACGGCAAGAGCGTCTGTATCGTCGAC
AAGTCGAGCCAAATCGGAGGAGTGTGTGTCCACACGGGTACGATTCCGAG
CAAGACGTTCAGGGAGGCCGTCCTGCATCTAACGGGGTGGCGGCATCAGG
GCTTTTACGGCCGGTCTAGCCAGAGAGCGAGGGCCGCCGTGGCCATTCCC
GATGTCCTTGCCAGGGTGCACAAGGGAGGCCGTCCTGCATCTAACGGGGT
GGCGGCATCAGGGCTTTTACGGCCGGTCTAGCCAGAGAGCGAGGGCCGCC
GTGGCCATTCCCGATGTCCTTGCCAGGGTGCACAAGGTGGAGATGAGGGA
GACGGGGGTGGTGCGAGACCAGCTGCAGCGCGAGGGGATCGAGCTGATCA
GCGGGACGGCTAGGTTCTTGCCGGGGGCGGAGGGGGAGCCCCACCGGGTG
ATGGTTCTGCGGACGAGCGAGAAGACCGAGGCGAAGACAAGGTGGAGATG
AGGGAGACGGGGGTGGTGCGAGACCAGCTGCAGCGCGAGGGGATCGAGCT
GATCAGCGGGACGGCTAGGTTCTTGCCGGGGGCGGAGGGGGAGCCCCACC
GGGTGATGGTTCTGCGGACGAGCGAGAAGACCGAGGCGAAGACAAGCGTG
TACCGGCACATCGAGGCGTCTCTGCCCAGCGTTACCCTCTCGGCCGACCG
GTTCTTGGTGGCCTGCGGGACGAGGCCGCTCCGGCGGCCGGACGTGCCCT
TCGACGGATCTCGCGTCTTCGACAGCGACCAGTTGCTGTGGGGAGGGGTC
AAGGTGCGTGTACCGGCACATCGAGGCGTCTCTGCCCAGCGTTACCCTCT
CGGCCGACCGGTTCTTGGTGGCCTGCGGGACGAGGCCGCTCCGGCGGCCG
GACGTGCCCTTCGACGGATCTCGCGTCTTCGACAGCGACCAGTTGCTGTG
GGGAGGGGTCAAGGTGGTGCCTCGGGATCTTATCGTTGTCGGAGCTGGGG
TGATCGGAATGGAATACGCGAGCATGTGCCTCGGGATCTTATCGTTGTCG
GAGCTGGGGTGATCGGAATGGAATACGCGAGCATGATCAACGTCATCCCG
GGTACGACGGTTACAGTCATCGACCCCAGAGATGAGGTGCTCGGGTTCGC
TGACCGGGAGGTGACGCAAGCGTTGTGCTACTCCATGCGGAAGAACGGCG
CTAGGATCAACGTCATCCCGGGTACGACGGTTACAGTCATCGACCCCAGA
GATGAGGTGCTCGGGTTCGCTGACCGGGAGGTGACGCAAGCGTTGTGCTA
CTCCATGCGGAAGAACGGCGCTAGGCTGTGGTGCCTGCTGGCTTGTCGGC
TTGCTGTGGTGCCTGCTGGCTTGTCGGCTTGTGAAGAGTGTGGAAAAAAG
GGATGACGGGAAGGTGGTGGCGCACCTACTGAGCGGCAAGCGGGTTTGTG
GCGATGCTCTCTTGTACGCCATGGGCCGTCTCGGCAACACCGACTCTCTA
AACCTGCAGGTGAAGAGTGTGGAAAAAAGGGATGACGGGAAGGTGGTGGC
GCACCTACTGAGCGGCAAGCGGGTTTGTGGCGATGCTCTCTTGTACGCCA
TGGGCCGTCTCGGCAACACCGACTCTCTAAACCTGCAGGCGATCGGGGTC
GACCCGGACGAGCGCGGGTTGCTCAACGTGGATGACTTCTACCGGACGGC
GCAGTCAGGAGTGTACGCGTGCGGAGACGTGATTGGGTACCCGGCGCTTG
CGAGCACCTCCATGGAGCAGGGCGTGCGAGCAGCGCACCACATGTGGAAC
GAAGCGATCGGGGTCGACCCGGACGAGCGCGGGTTGCTCAACGTGGATGA
CTTCTACCGGACGGCGCAGTCAGGAGTGTACGCGTGCGGAGACGTGATTG
GGTACCCGGCGCTTGCGAGCACCTCCATGGAGCAGGGCGTGCGAGCAGCG
CACCACATGTGGAACGAA
back to top