mRNA_L-elsbetiae_contig1298.2355.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1298.2355.1
Unique NamemRNA_L-elsbetiae_contig1298.2355.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1298.2355.1 vs. uniprot
Match: A0A6H5JCE6_9PHAE (2OG-FeII_Oxy_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCE6_9PHAE)

HSP 1 Score: 617 bits (1590), Expect = 4.660e-220
Identity = 291/332 (87.65%), Postives = 305/332 (91.87%), Query Frame = 3
Query:   84 YDALDAKAEQPAPA-RVSDSTADHVLVTDSFLEDETASGLRGTFHDRFSKPREGNPERFVWDWWHVPDQYTLMRTPAENYFGPEGFEQLLEALTKFGQEKLGCTAISPPWLSVYVDGCEQRYHTDSWHGPWAFVLSLTDWENRGFTGGETMILKPHVLDYWRSFQPGVGLEEKHFIDTVEPRFNRLTVFDPRFPHGVRPVEGTRDPLKGRLVIHGWFTDPQPFFTGGLSAEEATEPLNDALAEVYPALEGVGRVTGVLTVRLHVSGETGGVVSVVALTDTLIPDPNDVGVDEEGVEEDARADVLGVVEGGCQGARFPKAGEDTFITVPFVFE 1076
            ++A+DA   QPAP+     S+ +HVLV DSFL  ETAS LRG FHDRFSKPREG+PERFVWDWWHVPDQYTLMRTPAENYFGPEGF +LL+ALT FGQE+LGCTAISPPWLSVYVDGCEQRYHTDSWHGPWAFVLSLTDWENRGFTGGETMILKPHVLDYWRSFQPG+GLEEKHFIDTVEP FNRLTVFDPRFPHGVRPV GT+DPLKGRLVIHGWFTDPQPFFTGGLSAEEATEPLNDAL  VYPALEGVGRVTGVLTVRLHVSGETG VVSVVALTDTLIPDPNDVGVDEEGVEEDARADVL  V+ GC+ ARFP AGEDT ITVPFVFE
Sbjct:  115 FEAVDASQAQPAPSVDTQGSSPEHVLVMDSFLAGETASRLRGVFHDRFSKPREGSPERFVWDWWHVPDQYTLMRTPAENYFGPEGFTELLKALTNFGQERLGCTAISPPWLSVYVDGCEQRYHTDSWHGPWAFVLSLTDWENRGFTGGETMILKPHVLDYWRSFQPGIGLEEKHFIDTVEPHFNRLTVFDPRFPHGVRPVGGTKDPLKGRLVIHGWFTDPQPFFTGGLSAEEATEPLNDALETVYPALEGVGRVTGVLTVRLHVSGETGAVVSVVALTDTLIPDPNDVGVDEEGVEEDARADVLEAVDRGCREARFPAAGEDTHITVPFVFE 446          
BLAST of mRNA_L-elsbetiae_contig1298.2355.1 vs. uniprot
Match: D8LG16_ECTSI (2OG-FeII_Oxy_3 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG16_ECTSI)

HSP 1 Score: 600 bits (1547), Expect = 9.180e-216
Identity = 280/304 (92.11%), Postives = 288/304 (94.74%), Query Frame = 3
Query:  165 DSFLEDETASGLRGTFHDRFSKPREGNPERFVWDWWHVPDQYTLMRTPAENYFGPEGFEQLLEALTKFGQEKLGCTAISPPWLSVYVDGCEQRYHTDSWHGPWAFVLSLTDWENRGFTGGETMILKPHVLDYWRSFQPGVGLEEKHFIDTVEPRFNRLTVFDPRFPHGVRPVEGTRDPLKGRLVIHGWFTDPQPFFTGGLSAEEATEPLNDALAEVYPALEGVGRVTGVLTVRLHVSGETGGVVSVVALTDTLIPDPNDVGVDEEGVEEDARADVLGVVEGGCQGARFPKAGEDTFITVPFVFE 1076
            DSFLE ETAS LRG FHDRFSKPREG+PERFVWDWWHVPDQYTLMRTPAENYFG EGF +LL+ LTKFGQE+LGCTAISPPWLSVYVDGCEQRYHTDSWHGPWAFVLSLTDWENRGFTGGETMILKPHVLDYWRSFQPGVGLEEKHFIDTVEP FNRLTVFDPRFPHGVRPV GT+DPLKGRLVIHGWFTDPQPFFTGGLSAEEATEPLNDAL  VYPALEGVGRVTGVLTVRLHVSGETGGVVSVVALTDTLIPDPNDVG+DEEGVEEDARADVL  V+ GC+ ARFP AGEDT ITVPFVFE
Sbjct:    2 DSFLEGETASRLRGVFHDRFSKPREGSPERFVWDWWHVPDQYTLMRTPAENYFGREGFTELLDTLTKFGQERLGCTAISPPWLSVYVDGCEQRYHTDSWHGPWAFVLSLTDWENRGFTGGETMILKPHVLDYWRSFQPGVGLEEKHFIDTVEPHFNRLTVFDPRFPHGVRPVGGTKDPLKGRLVIHGWFTDPQPFFTGGLSAEEATEPLNDALEAVYPALEGVGRVTGVLTVRLHVSGETGGVVSVVALTDTLIPDPNDVGIDEEGVEEDARADVLDAVDRGCREARFPAAGEDTHITVPFVFE 305          
BLAST of mRNA_L-elsbetiae_contig1298.2355.1 vs. uniprot
Match: A0A835Z5I9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5I9_9STRA)

HSP 1 Score: 459 bits (1180), Expect = 2.310e-158
Identity = 224/369 (60.70%), Postives = 256/369 (69.38%), Query Frame = 3
Query:  117 APARVSDSTADHVLVTDSFLEDETASGLRGTFHDRFSKPREGNPERFVWDWWHVPDQYTLMRTPAENYFGPE---------------------------------------------GFEQLLEALTKFGQEKLGCTAISPPWLSVYVDGCEQRYHTDSWHGPWAFVLSLTDWENRGFTGGETMILKPHVLDYWRSFQPGVGLEEKHFIDTVEPRFNRLTVFDPRFPHGVRPVEGTRDPLKGRLVIHGWFTDPQPFFTGGLSAEEATEPLNDALAEVYPALEGV--GRVTGVLTVRLHVSGETGGVVSVVALTDTLIPDPNDVGVDEEGVEEDARADVLGVVEGGCQGARFP--KAGEDTFITVPFVFE 1076
            A A + +S   H+ V D FL+   A+ LRG F +RFSKPREG  ERFVWDWWHVP+QYTLMRTPAE YFGPE                                             GFE L  AL KFGQE+LGC AISPPWLSVY+DGCEQR+HTD+WHGPWAFVLSLTDW+ + FTGGET ILKPHVL+YW SF PG+GLEEKHF+DT+EP FNRLT+FDPRFPHGV+PV GTRDP KGRLV+HGWFTDPQP+F+GGLS EEATE LN A+    PAL     GRVTG LTVRLHVSG  G V +V ALTDTL+ DP D+  DEEG   DARA+ + ++     GA FP   +GEDTFITVP+ FE
Sbjct:   36 ATATLLESNPRHIHVLDGFLQQPQAAQLRGVFDERFSKPREGTAERFVWDWWHVPEQYTLMRTPAEEYFGPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFEALTAALCKFGQEQLGCRAISPPWLSVYIDGCEQRFHTDAWHGPWAFVLSLTDWDGKDFTGGETQILKPHVLNYWNSFAPGIGLEEKHFLDTIEPHFNRLTLFDPRFPHGVKPVRGTRDPRKGRLVLHGWFTDPQPYFSGGLSEEEATEALNRAMEASGPALAAAEGGRVTGTLTVRLHVSGADGSVRAVSALTDTLVADPTDLAYDEEGDPIDARAEAMLIIHEALGGADFPCSASGEDTFITVPYAFE 404          
BLAST of mRNA_L-elsbetiae_contig1298.2355.1 vs. uniprot
Match: L1IYM7_GUITC (Fe2OG dioxygenase domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IYM7_GUITC)

HSP 1 Score: 361 bits (926), Expect = 8.040e-121
Identity = 177/328 (53.96%), Postives = 225/328 (68.60%), Query Frame = 3
Query:  102 KAEQPAPARVSDSTADHVLVTDSFLEDETASGLRGTFHDRFSKPREGNPERFVWDWWHVPDQYTLMRTPAENYFGPEGFEQLLEALTKFGQEKLGCTAISPPWLSVYVDGCEQRYHTDSWHGPWAFVLSLTDWENRGFTGGETMILKPHVLDYWRSFQPGVGLEEKHFIDTVEPRFNRLTVFDPRFPHGVRPVEGTRDPLKGRLVIHGWFTD-PQPFF-TGGLSAEEATEPLNDALAEVYPALEG-VGRVTGVLTVRLHVSGETGGVVSVVALTDTLIPDPNDVGVDEEGVEEDARADVLGVVEGGCQGARFPKAGEDTFITVPFVFE 1076
            K    A   ++ S   H+++ D+FL  + A  LRGTF + F +PR  N +RFVWD+WHVP QYTL+RT AE+YF    +E+L  ALT FGQ+ LGC +I+ PWLS YVDGCEQR HTDSWHGP+A+VLSLT+WE R FTGGET +++   LDYWR+F P VGLEE   + TVEP FNRLT+FDPR PHGVR V GT+DP K RLV+HGWFTD   PF+  GG+S E ATE LN+AL  +Y +L     RV GVL VRL V G TG V  + ++ DT++ DP D+   E    E+ RA VL  +E   +  +F   G+D+ IT+PF+FE
Sbjct:   12 KGGSKATPALTKSLPRHLVIQDNFLAPDLAESLRGTFDENFLEPRSTNIKRFVWDYWHVPSQYTLIRTSAEDYFDAAQYERLTSALTDFGQKHLGCNSITKPWLSYYVDGCEQRMHTDSWHGPFAYVLSLTNWEEREFTGGETFLMESLALDYWRNFDPKVGLEEDKLMSTVEPHFNRLTLFDPRIPHGVRAVRGTKDPRKSRLVLHGWFTDLGTPFYEAGGISEESATEVLNEALQPLYDSLANKCSRVIGVLNVRLDVDGATGRVTKLSSVADTMVADPLDLI--EGNTPEEVRASVLKEIERHLKDLQFDSKGQDSSITLPFIFE 337          
BLAST of mRNA_L-elsbetiae_contig1298.2355.1 vs. uniprot
Match: A0A1Y1I053_KLENI (Fe2OG dioxygenase domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I053_KLENI)

HSP 1 Score: 342 bits (876), Expect = 4.370e-113
Identity = 168/311 (54.02%), Postives = 211/311 (67.85%), Query Frame = 3
Query:  147 DHVLVTDSFLEDETASGLRGTFHDRFSKPREGNPERFVWDWWHVPDQYTLMRTPAENYFGPEGFEQLLEALTKFGQEKLGCTAISPPWLSVYVDGCEQRYHTDSWHGPWAFVLSLTDWENRGFTGGETMILKPHVLDYWRSFQPGVGLEEKHFIDTVEPRFNRLTVFDPRFPHGVRPVEGTRDPLKGRLVIHGWFTDPQPFFTGGLSAEEATEPLNDALAEVYPALEGVGRVTGVLTVRLHVSGETGGVVSVVALTDTLIPDPNDVGVDEEGVEEDARADVLGVVEGGCQGARFPKAGE-DTFITVPFVFE 1076
            +H+++ D FL+  +A  LR  F  RF++PR+   +RFVWD+WHVP+QYTL+RTPAE++F    +E L +AL  +G+ KLGC +ISP WLS YVDGC Q  H D+ HGPWAFVLSLTDWE R F+GGETMIL+PHVLDYWR F+   G+E +  +  VEP FNRLTVFDPR PHGVRPV GT+DP + RLV+HGWFT+P PFFTG L   EA   LN AL  ++  +      TG  TVRL +SG TG V  +  LTDTLI  P   G DE G   D    V   +     GA FP + + DT++T+PFVF+
Sbjct:   46 EHLIIEDEFLD--SAEELREHFDSRFAEPRQIRMDRFVWDYWHVPNQYTLIRTPAEDFFPRTLYESLEDALLSYGENKLGCRSISPVWLSYYVDGCSQELHADNPHGPWAFVLSLTDWERRRFSGGETMILQPHVLDYWRGFEARRGMELEDLVTQVEPDFNRLTVFDPRLPHGVRPVRGTQDPREARLVLHGWFTEPTPFFTGALEEHEAVASLNAALEPLFEEVATFSPSTGTTTVRLTISGSTGAVTDLEWLTDTLIEVP---GGDEPGAVRDQ---VQRTIVRHLGGATFPTSDKGDTYLTMPFVFD 348          
BLAST of mRNA_L-elsbetiae_contig1298.2355.1 vs. uniprot
Match: A0A835YAF1_9CHLO (Fe2OG dioxygenase domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835YAF1_9CHLO)

HSP 1 Score: 344 bits (883), Expect = 1.550e-112
Identity = 178/321 (55.45%), Postives = 213/321 (66.36%), Query Frame = 3
Query:  141 TADHVLVTDSFLEDETASGLRGTFHDRFSKPREGNPERFVWDWWHVPDQYTLMRTPAENYFGPEGFEQLLEALTKFGQEKLGCTAISPPWLSVYVDGCEQRYHTDSWHGPWAFVLSLT-DWENRGFTGGETMILKPHVLDYWRSFQPGVGLEEKHFIDTVEPRFNRLTVFDPRFPHGVRPVEGTRDPLKGRLVIHGWFTDPQPFFTGGLSAEEATEPLNDALAEVYPALEGV-GRVTGVLTVRLHVSGETGGVVSVVALTDTLIPDPNDVGVDEEGVEEDA-----RADVLGVVEGGCQGARFPKA--GEDTFITVPFVFE 1076
            TA HV+V D FL  + A  LRG F  RF+ PR  +PERFVWD+WHVPDQYTL+RT A  YF  E + QL +AL  +G+ +LGC AISP W+S YVDGC Q  H D+ HGP+AFVLSLT DW+ R F GGETMILKP VL+YWRSF P  GLE +H +  V   FNRLTVFDPRFPHGVR V GTRDP KGRLV+HGWFT+P PFF+G L   EA   L++ L  ++ ALE V G V+G L  R+ +SG TG V  +  L DTL+  PN      E + E       RA V G V+    G  FP A  GED+ +T+P VFE
Sbjct:  143 TAQHVIVRDGFLTPQLAGALRGVFDGRFADPRATHPERFVWDYWHVPDQYTLIRTQAAVYFPDELYAQLEDALLSYGETQLGCRAISPIWMSYYVDGCGQELHCDNPHGPFAFVLSLTMDWDKREFVGGETMILKPEVLNYWRSFDPRKGLELQHLVTRVPSPFNRLTVFDPRFPHGVRQVHGTRDPRKGRLVLHGWFTEPAPFFSGPLDPAEAAAALSEGLEPLWAALEAVSGLVSGTLISRVTISGATGAVTDLTWLADTLVEVPNHDRAAAEALLEGRVLPRLRALVQGEVKECLMGLTFPAAESGEDSHLTLPLVFE 463          
BLAST of mRNA_L-elsbetiae_contig1298.2355.1 vs. uniprot
Match: A0A8J9WMG0_9CHLO (Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WMG0_9CHLO)

HSP 1 Score: 340 bits (872), Expect = 3.090e-112
Identity = 174/350 (49.71%), Postives = 228/350 (65.14%), Query Frame = 3
Query:   57 TRKFRGATRYDALDAKA---EQPAPARVSDSTA-----DHVLVTDSFLEDETASGLRGTFHDRFSKPREGNPERFVWDWWHVPDQYTLMRTPAENYFGPEGFEQLLEALTKFGQEKLGCTAISPPWLSVYVDGCEQRYHTDSWHGPWAFVLSLTDWENRGFTGGETMILKPHVLDYWRSFQPGVGLEEKHFIDTVEPRFNRLTVFDPRFPHGVRPVEGTRDPLKGRLVIHGWFTDPQPFFTGGLSAEEATEPLNDALAEVYPALEGVGRVTGVLTVRLHVSGETGGVVSVVALTDTLIPDPNDVGVDEEGVEEDARADVLG-VVEGGCQGARFPKAGE-DTFITVPFVFE 1076
            TR  +GA+   ++ A A   +Q +P+ V++  A       ++V D FL   +A+ LR  +  RF  P +   +RFVWD+WHVP+QYTL+RTPA+ +F  + + +L +AL +FG++ LGC  ISP WLS YVDGC Q  H DS HGPWAFVLSLT+W+ R F GGETM+ +PH+LD+W SF P  G E K  +  VEPRFNRLTVFD R+PHGVRPVEGTRDPL+ RLV+HGWFT+P PFF G L  E AT+ L+  L+E+Y  L  + +  G + VR  VSGETG   ++  LTDTL+  P+D   D E V    R  V G +V    Q A FP     DT IT+PF+F+
Sbjct:   22 TRYCKGASFIRSVRASASGVQQQSPSAVNEEFAWTEEPQQLIVLDDFLP--SAASLRSHYDSRFRDPLKTTGDRFVWDYWHVPNQYTLLRTPADQFFPEDTYRELEDALLEFGEQHLGCRGISPIWLSYYVDGCRQELHADSPHGPWAFVLSLTNWDERSFRGGETMVFQPHMLDFWSSFDPTKGFEMKDMVTLVEPRFNRLTVFDGRYPHGVRPVEGTRDPLRARLVLHGWFTEPSPFFDGPLDEEAATQALDSVLSELYEELGNLPQCLGTVVVRFTVSGETGQTSNLRCLTDTLVHVPSDPDPDGENV----RDQVFGAIVHYLSQRAAFPPCQHGDTVITLPFIFQ 365          
BLAST of mRNA_L-elsbetiae_contig1298.2355.1 vs. uniprot
Match: I0YZR4_COCSC (Fe2OG dioxygenase domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YZR4_COCSC)

HSP 1 Score: 340 bits (872), Expect = 3.090e-112
Identity = 164/309 (53.07%), Postives = 209/309 (67.64%), Query Frame = 3
Query:  153 VLVTDSFLEDETASGLRGTFHDRFSKPREGNPERFVWDWWHVPDQYTLMRTPAENYFGPEGFEQLLEALTKFGQEKLGCTAISPPWLSVYVDGCEQRYHTDSWHGPWAFVLSLTDWENRGFTGGETMILKPHVLDYWRSFQPGVGLEEKHFIDTVEPRFNRLTVFDPRFPHGVRPVEGTRDPLKGRLVIHGWFTDPQPFFTGGLSAEEATEPLNDALAEVYPALEGVGRVTGVLTVRLHVSGETGGVVSVVALTDTLIPDPNDVGVDEEGVEEDARADVLGVVEGGCQGARFPKAGE-DTFITVPFVFE 1076
            +L+TD+FL   TA+ LR  F  RF  P +   +RFVWD+WHVPDQYTL+RTPA+++F  + + +L +AL ++G+++LGC  ISP WLS YV GC Q  H DS HGPWAFVLSLT WE R F+GGETMI +PH+LD+W SF P  G E K  +  VEP FNRLTVFD R+PHGVRPVEGTRDPL+ RLV+HGWFT+P PFF G L  E ATE L+  L+E+Y  L  + +  G + +R  VSGETG V ++  LTDTL+  P D   D   V +     +   +    Q A FP   + DT IT+PFVF+
Sbjct:   62 LLLTDNFLP--TATALREHFESRFENPLKTTSDRFVWDYWHVPDQYTLLRTPADHFFPEDTYRELEDALLEYGEQQLGCRGISPIWLSYYVHGCRQELHADSPHGPWAFVLSLTQWEGRSFSGGETMIFQPHMLDFWSSFDPARGFEVKDMVTLVEPHFNRLTVFDGRYPHGVRPVEGTRDPLRARLVLHGWFTEPSPFFDGPLDEEAATETLDSVLSELYEELGSLPQCLGTIVIRFTVSGETGQVSNLRCLTDTLVHVPTDPDPDGLSVRDQVFDAIHHHIS---QRAEFPPCQQGDTSITLPFVFQ 365          
BLAST of mRNA_L-elsbetiae_contig1298.2355.1 vs. uniprot
Match: A0A8J4AM92_9CHLO (Fe2OG dioxygenase domain-containing protein n=3 Tax=Volvox TaxID=3066 RepID=A0A8J4AM92_9CHLO)

HSP 1 Score: 339 bits (870), Expect = 2.690e-110
Identity = 172/337 (51.04%), Postives = 222/337 (65.88%), Query Frame = 3
Query:   93 LDAKAEQPAPARVSDSTADHVLVTDSFLEDETASGLRGTFHDRFSKPREGNPERFVWDWWHVPDQYTLMRTPAENYFGPEGFEQLLEALTKFGQEKLGCTAISPPWLSVYVDGCEQRYHTDSWHGPWAFVLSLT-DWENRGFTGGETMILKPHVLDYWRSFQPGVGLEEKHFIDTVEPRFNRLTVFDPRFPHGVRPVEGTRDPLKGRLVIHGWFTDPQPFFTGGLSAEEATEPLNDALAEVYPALEGV-GRVTGVLTVRLHVSGETGGVVSVVALTDTLIPDPNDVGVDEEGVEEDA-----RADVLGVVEGGCQGARFPK--AGEDTFITVPFVFE 1076
            ++A  +Q  P     +++ H++V D FL +  A  LRG F +RF+ PR  +PERF+WD+WHVPDQYTL+RT A+ YF  E +++L +AL  +G+ +LGC AISP W+S YVDGC Q  H D+ HGP+AFVLSLT DW+ R FTGGETMIL+P VL+YWRS++P  GLE +  +  V   FNRLTVFDPRFPHGVR V GTRDP K RLV+HGWFT+P PFF G L   +A E LN  LA ++ ALEG+ G +TG L VR+H+SG +G V  +  L DTL+  PN      E + E       RA V   V        FP   +GED+ +T P +FE
Sbjct:  148 VEALRQQEIPVLEELTSSTHIIVNDGFLSEADARALRGVFDERFADPRVIHPERFLWDYWHVPDQYTLVRTQAQVYFPEELYQRLEDALLTYGESQLGCRAISPIWMSYYVDGCVQELHCDNPHGPFAFVLSLTQDWDQREFTGGETMILQPGVLNYWRSYEPRKGLEMQQLVTRVPAPFNRLTVFDPRFPHGVRQVHGTRDPRKSRLVLHGWFTEPAPFFQGPLDPADAEEALNGGLAPLWDALEGISGLITGTLIVRVHISGRSGSVTDLQWLADTLVEVPNHDRAAAEALLEGRVLPRLRALVHNEVHDCLTAIIFPTVPSGEDSVLTYPIIFE 484          
BLAST of mRNA_L-elsbetiae_contig1298.2355.1 vs. uniprot
Match: A0A2V0NRD4_9CHLO (Oxoglutarate iron-dependent dioxygenase n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NRD4_9CHLO)

HSP 1 Score: 335 bits (860), Expect = 1.080e-109
Identity = 173/331 (52.27%), Postives = 210/331 (63.44%), Query Frame = 3
Query:   96 DAKAEQPAPARVSDSTADHVLVTDSFLEDETASGLRGTFHDRFSKPREGNPERFVWDWWHVPDQYTLMRTPAENYFGPEGFEQLLEALTKFGQEKLGCTAISPPWLSVYVDGCEQRYHTDSWHGPWAFVLSLTDWENRGFTGGETMILKPHVLDYWRSFQPGVGLEEKHFIDTVEPRFNRLTVFDPRFPHGVRPVEGTRDPLKGRLVIHGWFTDPQPFFTGGLSAEEATEPLNDALAEVYPALEGVGRVTGVLTVRLHVSGETGGVVSVVALTDTLIPDPNDVGVDEEGV---EEDARADVLGVVEGGCQGARFPK-AGEDTFITVPFVFE 1076
            +A+ E P P     S A H++V   F +   AS LR  F +RF  PR+   E F+W +W+V +QYTL RT A  YF    +++L   L  +G+  LGC AI+P W+S YVDGC Q  H DS+HGP+AFVLSLT WE R FTGGETMILKP  LD+W  FQPG GLE    ++ V PRFN+LT+FDPR PHGVRPV GTRDP+K RLV+HGWFT+P PF  GGL  E A E LN+AL  ++   E +  V G LTVR+ V G  GGV  V  L DTL+  P  V  D+EG    +  ARA V   V  G   ARFP  AG DT +T PFVFE
Sbjct:   92 EAEFEGPLPEL---SEARHIIVQPGFSD--AASDLRAVFDERFGDPRKPLREHFLWHYWYVENQYTLHRTQAAAYFPKALYKRLESDLIAYGERVLGCRAITPVWMSYYVDGCAQELHCDSFHGPFAFVLSLTHWEERAFTGGETMILKPATLDFWSGFQPGRGLELGDLVELVPPRFNQLTLFDPRLPHGVRPVHGTRDPMKSRLVLHGWFTEPSPFIEGGLEPEAAVEALNEALDAIFEEFEALPAVLGTLTVRIDVRGADGGVDGVAFLADTLVVRPGQVITDDEGEPLPDSAARAAVQHAVRDGLAAARFPACAGGDTRVTYPFVFE 417          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1298.2355.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JCE6_9PHAE4.660e-22087.652OG-FeII_Oxy_3 domain-containing protein n=1 Tax=E... [more]
D8LG16_ECTSI9.180e-21692.112OG-FeII_Oxy_3 domain-containing protein n=1 Tax=E... [more]
A0A835Z5I9_9STRA2.310e-15860.70Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
L1IYM7_GUITC8.040e-12153.96Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A1Y1I053_KLENI4.370e-11354.02Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A835YAF1_9CHLO1.550e-11255.45Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A8J9WMG0_9CHLO3.090e-11249.71Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi ... [more]
I0YZR4_COCSC3.090e-11253.07Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A8J4AM92_9CHLO2.690e-11051.04Fe2OG dioxygenase domain-containing protein n=3 Ta... [more]
A0A2V0NRD4_9CHLO1.080e-10952.27Oxoglutarate iron-dependent dioxygenase n=1 Tax=Ra... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1298contigL-elsbetiae_contig1298:24194..27317 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score601.3
Seed ortholog evalue3e-169
Seed eggNOG ortholog2880.D8LG16
Hectar predicted targeting categoryother localisation
EggNOG OGs28MKF@1,2QU44@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionOxoglutarate/iron-dependent dioxygenase
Ec32 orthologEc-21_004960.1
Exons5
Model size1079
Cds size1071
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1298.2355.1prot_L-elsbetiae_contig1298.2355.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1298 24194..27309 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815478.2818632-CDS-L-elsbetiae_contig1298:24193..245591622815478.2818632-CDS-L-elsbetiae_contig1298:24193..24559Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1298 24194..24559 -
1691682917.5702999-CDS-L-elsbetiae_contig1298:24193..245591691682917.5702999-CDS-L-elsbetiae_contig1298:24193..24559Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1298 24194..24559 -
1622815478.3313868-CDS-L-elsbetiae_contig1298:25086..253041622815478.3313868-CDS-L-elsbetiae_contig1298:25086..25304Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1298 25087..25304 -
1691682917.582137-CDS-L-elsbetiae_contig1298:25086..253041691682917.582137-CDS-L-elsbetiae_contig1298:25086..25304Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1298 25087..25304 -
1622815478.3461273-CDS-L-elsbetiae_contig1298:26207..264061622815478.3461273-CDS-L-elsbetiae_contig1298:26207..26406Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1298 26208..26406 -
1691682917.5915132-CDS-L-elsbetiae_contig1298:26207..264061691682917.5915132-CDS-L-elsbetiae_contig1298:26207..26406Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1298 26208..26406 -
1622815478.3556144-CDS-L-elsbetiae_contig1298:26788..270021622815478.3556144-CDS-L-elsbetiae_contig1298:26788..27002Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1298 26789..27002 -
1691682917.6047332-CDS-L-elsbetiae_contig1298:26788..270021691682917.6047332-CDS-L-elsbetiae_contig1298:26788..27002Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1298 26789..27002 -
1622815478.365022-CDS-L-elsbetiae_contig1298:27235..273091622815478.365022-CDS-L-elsbetiae_contig1298:27235..27309Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1298 27236..27309 -
1691682917.61393-CDS-L-elsbetiae_contig1298:27235..273091691682917.61393-CDS-L-elsbetiae_contig1298:27235..27309Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1298 27236..27309 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815478.3743033-UTR-L-elsbetiae_contig1298:27309..273171622815478.3743033-UTR-L-elsbetiae_contig1298:27309..27317Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1298 27310..27317 -
1691682917.6249654-UTR-L-elsbetiae_contig1298:27309..273171691682917.6249654-UTR-L-elsbetiae_contig1298:27309..27317Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1298 27310..27317 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1298.2355.1

>prot_L-elsbetiae_contig1298.2355.1 ID=prot_L-elsbetiae_contig1298.2355.1|Name=mRNA_L-elsbetiae_contig1298.2355.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=357bp
MAKRTRACPSGLQATDTRKFRGATRYDALDAKAEQPAPARVSDSTADHVL
VTDSFLEDETASGLRGTFHDRFSKPREGNPERFVWDWWHVPDQYTLMRTP
AENYFGPEGFEQLLEALTKFGQEKLGCTAISPPWLSVYVDGCEQRYHTDS
WHGPWAFVLSLTDWENRGFTGGETMILKPHVLDYWRSFQPGVGLEEKHFI
DTVEPRFNRLTVFDPRFPHGVRPVEGTRDPLKGRLVIHGWFTDPQPFFTG
GLSAEEATEPLNDALAEVYPALEGVGRVTGVLTVRLHVSGETGGVVSVVA
LTDTLIPDPNDVGVDEEGVEEDARADVLGVVEGGCQGARFPKAGEDTFIT
VPFVFE*
back to top

mRNA from alignment at L-elsbetiae_contig1298:24194..27317-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1298.2355.1 ID=mRNA_L-elsbetiae_contig1298.2355.1|Name=mRNA_L-elsbetiae_contig1298.2355.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3124bp|location=Sequence derived from alignment at L-elsbetiae_contig1298:24194..27317- (Laminarionema elsbetiae ELsaHSoW15)
CCATACGGATGGCGAAGCGCACACGGGCATGCCCCTCGGGACTCCAGGCT ACCGACACGCGCAAGTTTCGTGGCGCAACGAGGTCTGCAGGCGGAGAAAT CCCAAAAAAACGGGTCTAAAACAGCTCTCGAGCGCTGAGAGAGCAGGAAG CACGAATGCTGCACGCTCGTTGCTCGAGTATGAAGGTCTATATGTTTATT ATGGAGTAGTAGTTTGTAGTGGTAGCTCAATAAACAAGGCACGCGCCACT GTTGTCACCATCGTGGCACTGCTGCTGTACGCCTCCCCTCGTGGGCCCTC AACGCTATTTTGCAGGTACGACGCCTTGGATGCGAAGGCGGAGCAGCCCG CCCCTGCCCGCGTGTCGGACAGCACTGCCGACCACGTTCTCGTGACGGAC TCGTTTCTTGAGGATGAAACGGCGTCCGGCCTCCGCGGGACCTTCCACGA CCGCTTCTCCAAGCCGAGAGAGGGGAACCCGGAGCGGTTTGTGTGGGACT GGTGGCACGTGCCAGACCAGTACACGCTGGTGAGGCAGGCCAGAACTGAC AAGTAGTCGGAACCAGCTGTGCGTATCTCTATGTACTGCTTCAAGTGTCT GTCTTTCCGTGGTCTTGGAAGCCGGTAAGCAGCTACCAAATAGGTGATCA CTGTTGACTTTTTGCTGTCCCTTCCGCAGCCTACCACTTCGCCCTGTTTT ATACAGTTCAAATACCGGGTGTCTACTTGTCACCGGGCGTAAGGATATAT ATGTATCTGTCTCCGAGCATACTCCAGGTCAACACAGGAGATTCTTTCTT CCCAGACTACTACTACTGCTGTTGCCGCCTTTCCCTTGCAAAGCGTGTCC ACCTCCCCTGACTGTTGTCGTTTTCCCGGGTTTCCTCGCCCCCCCTTTTC CCTGCGTGAAGATGCGAACGCCGGCCGAAAACTACTTCGGCCCCGAGGGT TTTGAGCAGCTGCTCGAGGCGCTCACCAAGTTCGGGCAAGAGAAGCTGGG GTGCACGGCGATCTCCCCTCCCTGGCTCAGCGTGTACGTGGACGGGTGCG AGCAGAGGTACCACACGGACTCCTGGCACGGGCCCTGGGCGTTTGTGCTC TCTCTCACCGGTGATTGTGACGTCAGTTTTTTTGTTTTCCGTGCTCTTGT TGTCAGTGAGTGCCCTTGCAAGCCAGGGATGGCTCCCACGATGTGGTAGA TTCGCGCATCGGTCTTGACACGTGTCGATCGCCTGAAAGGGCCGAAGGCA GGGAATCAACAGTCAAAGCAGCGCTGGTATGTAACGCAAGACAGGATGCG CGTGTTTCCACCCAGTGGGGTGTACGGTACTTACAAAGTGTTCTCGGAAG ACTACAGACGCGTGTGGCAAGCAGGGTAAGCGTCATGGAAGCTCCGCATC TGCGTTGGACACGAAAATGGTTTACTCGGGACAGTTTGTCCGAGAAGAAA ACAAATTTTCTATGTATTCATGGGCGCAAATTAAGCACGATCATTGGTGG GGAACTATAAAGCTCTTAGTTTCTAAGAAGGCGCACGTTGGATAATTTGC TGCCCTTGTCACTGCTTTCCTCTATATTTTCGACGAGCAACACGGCCGAA ACTCTTCTCATGTTCAAAATTAAAAAGCTGAAGGCAAGCACCGCAGAGGG GGGGGGGGCTCAGGGAAAGGAACCTTTCTGTGCGACCACGGTTCGGAGCC CAGGCAAGATGCCCCGTCGTCGCAAGGAGCCCTTCGAGCGCTGGAAATAA TTGTGAAGAAAAACAAAGCATCAACATCAACATCAACATGCCACACACCT CTTTCGTGCTTGGGCACCTCCTTCTTTTTACGGCAGCCTTGTTCGTTTGG ATGATGTAGCGCCGGAGTGCTTGCGCCACCACCCTTGGTCGCCTGGCCTC TCCCTCGCTTCTGCTGCTTGTGAACCTCGTTGCCCCATACATAGGACCAT GCGTCTAGAACAGATAGATGCCCAAGCGCTTTTTGACCTCGTTGAGACTT TCTTCGTGTCCAGACTGGGAAAACCGCGGGTTTACCGGAGGCGAGACTAT GATCCTGAAGCCTCACGTGCTGGACTACTGGAGGAGTTTCCAGCCGGGCG TCGGCCTCGAGGAGAAGCACTTCATCGACACAGTGGAGCCGCGGTTCAAC CGGCTCACCGTGTTCGATCCGCGCTTCCCGCACGGCGTTCGTCCTGTTGA GGGCACTCGGGACCCCCTCAAGGGCCGTTTGGTGAGTCTGCCGCACGCAC ATACATGCGCCAGTCCGCCTCGAAGGTTGTGTTGGGGCTGTGTCTTTTTC TGTTATTTTTCTTGTTTCCCATGAAGGTACGCGCGCGGTCAGTTGCTTGG TTTTTTTAGGGTGCCCGCCTGCAAGAGAGCAAGTGCTAGAAACGATGCAG CACACGCATCGTGGGCAGGGGTTGGTGTTTTTTACCTGTAGTTACCCGTG GCCTCTCTGAAAACAGGTAGTGGCTTGCGCCCGCTGCTCCGCGTCCGACG GAATGATCTCGGGTTTGTGAACACACTCCGCACCGCAACTCGCCCTTTCC GTATCCTCGACTTGCACAGCAGTACCGTAGGGTTGGGAGGTACATCGTGG CGACCGCCCTCATCGTCATTGATCCCCATCAATTTGCGAAATCTGGCCTG CGCCCTTTCTTTCCAACACATACATACATACATACATACAACATACATAC ATACATGAGAAGAATGGCACACCAACGTAACAATCAAACAACAAAATGAC AATGACAGGTGATCCACGGGTGGTTCACGGACCCCCAGCCCTTCTTCACC GGCGGCCTCAGCGCGGAAGAAGCGACAGAGCCGCTGAACGACGCCCTGGC CGAGGTGTACCCCGCCCTAGAGGGCGTCGGCCGCGTCACCGGTGTCCTCA CCGTGCGCCTGCACGTGTCGGGAGAAACCGGAGGCGTAGTGAGCGTCGTT GCTCTGACGGACACCCTTATTCCCGACCCCAATGATGTCGGCGTCGATGA GGAGGGGGTCGAGGAAGACGCTAGGGCGGACGTGCTTGGGGTTGTGGAGG GGGGGTGCCAGGGGGCGAGGTTTCCCAAGGCCGGCGAGGACACGTTCATT ACCGTGCCCTTCGTGTTTGAGTAG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig1298:24194..27317-

>mRNA_L-elsbetiae_contig1298.2355.1 ID=mRNA_L-elsbetiae_contig1298.2355.1|Name=mRNA_L-elsbetiae_contig1298.2355.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2142bp|location=Sequence derived from alignment at L-elsbetiae_contig1298:24194..27317- (Laminarionema elsbetiae ELsaHSoW15)
ATGGCGAAGCGCACACGGGCATGCCCCTCGGGACTCCAGGCTACCGACAC
GCGCAAGTTTCGTGGCGCAACGAGATGGCGAAGCGCACACGGGCATGCCC
CTCGGGACTCCAGGCTACCGACACGCGCAAGTTTCGTGGCGCAACGAGGT
ACGACGCCTTGGATGCGAAGGCGGAGCAGCCCGCCCCTGCCCGCGTGTCG
GACAGCACTGCCGACCACGTTCTCGTGACGGACTCGTTTCTTGAGGATGA
AACGGCGTCCGGCCTCCGCGGGACCTTCCACGACCGCTTCTCCAAGCCGA
GAGAGGGGAACCCGGAGCGGTTTGTGTGGGACTGGTGGCACGTGCCAGAC
CAGTACACGCTGGTACGACGCCTTGGATGCGAAGGCGGAGCAGCCCGCCC
CTGCCCGCGTGTCGGACAGCACTGCCGACCACGTTCTCGTGACGGACTCG
TTTCTTGAGGATGAAACGGCGTCCGGCCTCCGCGGGACCTTCCACGACCG
CTTCTCCAAGCCGAGAGAGGGGAACCCGGAGCGGTTTGTGTGGGACTGGT
GGCACGTGCCAGACCAGTACACGCTGATGCGAACGCCGGCCGAAAACTAC
TTCGGCCCCGAGGGTTTTGAGCAGCTGCTCGAGGCGCTCACCAAGTTCGG
GCAAGAGAAGCTGGGGTGCACGGCGATCTCCCCTCCCTGGCTCAGCGTGT
ACGTGGACGGGTGCGAGCAGAGGTACCACACGGACTCCTGGCACGGGCCC
TGGGCGTTTGTGCTCTCTCTCACCGATGCGAACGCCGGCCGAAAACTACT
TCGGCCCCGAGGGTTTTGAGCAGCTGCTCGAGGCGCTCACCAAGTTCGGG
CAAGAGAAGCTGGGGTGCACGGCGATCTCCCCTCCCTGGCTCAGCGTGTA
CGTGGACGGGTGCGAGCAGAGGTACCACACGGACTCCTGGCACGGGCCCT
GGGCGTTTGTGCTCTCTCTCACCGACTGGGAAAACCGCGGGTTTACCGGA
GGCGAGACTATGATCCTGAAGCCTCACGTGCTGGACTACTGGAGGAGTTT
CCAGCCGGGCGTCGGCCTCGAGGAGAAGCACTTCATCGACACAGTGGAGC
CGCGGTTCAACCGGCTCACCGTGTTCGATCCGCGCTTCCCGCACGGCGTT
CGTCCTGTTGAGGGCACTCGGGACCCCCTCAAGGGCCGTTTGACTGGGAA
AACCGCGGGTTTACCGGAGGCGAGACTATGATCCTGAAGCCTCACGTGCT
GGACTACTGGAGGAGTTTCCAGCCGGGCGTCGGCCTCGAGGAGAAGCACT
TCATCGACACAGTGGAGCCGCGGTTCAACCGGCTCACCGTGTTCGATCCG
CGCTTCCCGCACGGCGTTCGTCCTGTTGAGGGCACTCGGGACCCCCTCAA
GGGCCGTTTGGTGATCCACGGGTGGTTCACGGACCCCCAGCCCTTCTTCA
CCGGCGGCCTCAGCGCGGAAGAAGCGACAGAGCCGCTGAACGACGCCCTG
GCCGAGGTGTACCCCGCCCTAGAGGGCGTCGGCCGCGTCACCGGTGTCCT
CACCGTGCGCCTGCACGTGTCGGGAGAAACCGGAGGCGTAGTGAGCGTCG
TTGCTCTGACGGACACCCTTATTCCCGACCCCAATGATGTCGGCGTCGAT
GAGGAGGGGGTCGAGGAAGACGCTAGGGCGGACGTGCTTGGGGTTGTGGA
GGGGGGGTGCCAGGGGGCGAGGTTTCCCAAGGCCGGCGAGGACACGTTCA
TTACCGTGCCCTTCGTGTTTGAGTAGGTGATCCACGGGTGGTTCACGGAC
CCCCAGCCCTTCTTCACCGGCGGCCTCAGCGCGGAAGAAGCGACAGAGCC
GCTGAACGACGCCCTGGCCGAGGTGTACCCCGCCCTAGAGGGCGTCGGCC
GCGTCACCGGTGTCCTCACCGTGCGCCTGCACGTGTCGGGAGAAACCGGA
GGCGTAGTGAGCGTCGTTGCTCTGACGGACACCCTTATTCCCGACCCCAA
TGATGTCGGCGTCGATGAGGAGGGGGTCGAGGAAGACGCTAGGGCGGACG
TGCTTGGGGTTGTGGAGGGGGGGTGCCAGGGGGCGAGGTTTCCCAAGGCC
GGCGAGGACACGTTCATTACCGTGCCCTTCGTGTTTGAGTAG
back to top