mRNA_L-elsbetiae_contig10186.234.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10186.234.1 vs. uniprot
Match: A0A6H5KC39_9PHAE (Aa_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC39_9PHAE) HSP 1 Score: 253 bits (645), Expect = 4.270e-79 Identity = 127/147 (86.39%), Postives = 141/147 (95.92%), Query Frame = 1 Query: 1 RAWRSVATWSIGGGSCLCYAMGLAGYLSFRDSVDGDILLNFSGAVASVFKLAVVVHLVLYIPSEVIVMRHSLYALRGEDVMAAEFEQVAWVTFALLALVVGAVIGLNTVGIAQGDLFGYILDVTGGVSASVTSFILPGLIYLGATGD 441 RAWRSVATW++ G+CLCY+MGLAGYLSFRDSVDGDILLNFSGA+ASVFK AVVVHL+LYIPSEVIVMRHSLYALRG+DVM AEF QVAWVTFALLALVVGA++GLNTVG+AQGD+FGYILD+TGGV+AS TSF+LPGLIYLGATGD Sbjct: 351 RAWRSVATWALVVGACLCYSMGLAGYLSFRDSVDGDILLNFSGAIASVFKTAVVVHLILYIPSEVIVMRHSLYALRGKDVMVAEFGQVAWVTFALLALVVGAMVGLNTVGVAQGDMFGYILDITGGVAASATSFVLPGLIYLGATGD 497
BLAST of mRNA_L-elsbetiae_contig10186.234.1 vs. uniprot
Match: D7FZR9_ECTSI (Transmembrane amino acid transporter protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR9_ECTSI) HSP 1 Score: 196 bits (497), Expect = 1.070e-57 Identity = 99/116 (85.34%), Postives = 109/116 (93.97%), Query Frame = 1 Query: 1 RAWRSVATWSIGGGSCLCYAMGLAGYLSFRDSVDGDILLNFSGAVASVFKLAVVVHLVLYIPSEVIVMRHSLYALRGEDVMAAEFEQVAWVTFALLALVVGAVIGLNTVGIAQGDL 348 RAWRSV+TW++G G CLCY+MGLAGYLSFRDSVDGDILLNFSGA+ASVFK AVVVHL+LYIPSEVIVMRHSLYALRG+DVM AEF QVAWVTFALLAL VGA++GLNTVG+AQG L Sbjct: 351 RAWRSVSTWALGVGVCLCYSMGLAGYLSFRDSVDGDILLNFSGAIASVFKAAVVVHLILYIPSEVIVMRHSLYALRGKDVMVAEFGQVAWVTFALLALAVGAMVGLNTVGVAQGPL 466
BLAST of mRNA_L-elsbetiae_contig10186.234.1 vs. uniprot
Match: A0A6V1XUJ0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1XUJ0_HETAK) HSP 1 Score: 123 bits (308), Expect = 2.330e-30 Identity = 67/141 (47.52%), Postives = 91/141 (64.54%), Query Frame = 1 Query: 4 AWRSVATWSIGGGSCLCYAMGLAGYLSFRDSVDGDILLNFSGAVASVFKLAVVVHLVLYIPSEVIVMRHSLYALRGEDVMAAEFEQVAWVTFALLALVVGAVIGLNTVGIAQGDLFGYILDVTGGVSASVTSFILPGLIYL 426 AW T ++ G+ +C +MGLAGYLSFRD +GDIL NFSG+ K+ +++HL+LYIP + +VMRHS+ + G +V +T LLA G V+ L VG+A+GD FGYILD TGG++A + SFI PG YL Sbjct: 280 AWAGATTPAVVIGAGMCTSMGLAGYLSFRDYTEGDILDNFSGSGWDFMKILLIIHLLLYIPIDFVVMRHSVCKIFGWNVDTMHIAPYLVLTAILLAFTAGCVMALYAVGVAEGDAFGYILDFTGGLTAPILSFICPGAFYL 420
BLAST of mRNA_L-elsbetiae_contig10186.234.1 vs. uniprot
Match: A0A835Z9L5_9STRA (Transmembrane amino acid transporter protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9L5_9STRA) HSP 1 Score: 119 bits (297), Expect = 4.210e-29 Identity = 62/142 (43.66%), Postives = 89/142 (62.68%), Query Frame = 1 Query: 1 RAWRSVATWSIGGGSCLCYAMGLAGYLSFRDSVDGDILLNFSGAVASVFKLAVVVHLVLYIPSEVIVMRHSLYALRGEDVMAAEFEQVAWVTFALLALVVGAVIGLNTVGIAQGDLFGYILDVTGGVSASVTSFILPGLIYL 426 +AW+ V T ++ G+ +C MGLAGYLSFR+ VDG+IL NF G V K+ +V HLV Y P E +V+RHS+ L ++ +A TFA++ +V I L+ G++ G FG ILD+ GGV+ S +FILP +I+L Sbjct: 247 KAWKIVVTGAMSAGAFMCLCMGLAGYLSFREEVDGNILTNFVGWVGDALKILLVAHLVWYTPQEFVVLRHSILRLAKQEPLAMSTALRVGSTFAIIGCLVAICIALDATGVSSGTAFGIILDIGGGVAGSFAAFILPAIIFL 388
BLAST of mRNA_L-elsbetiae_contig10186.234.1 vs. uniprot
Match: A0A6V1M2K4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1M2K4_HETAK) HSP 1 Score: 113 bits (282), Expect = 2.170e-27 Identity = 62/139 (44.60%), Postives = 85/139 (61.15%), Query Frame = 1 Query: 7 WRSVATWSIGGGSCLCYAMGLAGYLSFRDSVDGDILLNFSGAVASVFKLAVVVHLVLYIPSEVIVMRHSLYALRGEDVMAAEFEQVAWVTFALLALVVGAVIGLNTVGIAQGDLFGYILDVTGGVSASVTSFILPGLIY 423 W V++ +I G+ +C GLAGYL FR S GDIL NF G FK+ +V HL+LYIP + +VMRHS + G D + + VT LL +G V+ L G+++GD FGYILD+TGGV ++ F+LPG+ Y Sbjct: 149 WDRVSSLAIVVGTLMCAVTGLAGYLCFRSSTSGDILDNFQGPNFYFFKVLLVTHLILYIPLDFVVMRHSFCKVLGTDAIELPTGRYVVVTVGLLTFSLGVVMVLYYAGVSEGDAFGYILDLTGGVGNAMLGFVLPGIFY 287
BLAST of mRNA_L-elsbetiae_contig10186.234.1 vs. uniprot
Match: A0A6V2Y555_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2Y555_HETAK) HSP 1 Score: 113 bits (282), Expect = 1.220e-26 Identity = 62/139 (44.60%), Postives = 85/139 (61.15%), Query Frame = 1 Query: 7 WRSVATWSIGGGSCLCYAMGLAGYLSFRDSVDGDILLNFSGAVASVFKLAVVVHLVLYIPSEVIVMRHSLYALRGEDVMAAEFEQVAWVTFALLALVVGAVIGLNTVGIAQGDLFGYILDVTGGVSASVTSFILPGLIY 423 W V++ +I G+ +C GLAGYL FR S GDIL NF G FK+ +V HL+LYIP + +VMRHS + G D + + VT LL +G V+ L G+++GD FGYILD+TGGV ++ F+LPG+ Y Sbjct: 285 WDRVSSLAIVVGTLMCAVTGLAGYLCFRSSTSGDILDNFQGPNFYFFKVLLVTHLILYIPLDFVVMRHSFCKVLGTDAIELPTGRYVVVTVGLLTFSLGVVMVLYYAGVSEGDAFGYILDLTGGVGNAMLGFVLPGIFY 423
BLAST of mRNA_L-elsbetiae_contig10186.234.1 vs. uniprot
Match: A0A7S2V5U5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5U5_9STRA) HSP 1 Score: 102 bits (254), Expect = 9.740e-23 Identity = 54/129 (41.86%), Postives = 83/129 (64.34%), Query Frame = 1 Query: 40 GSCLCYAMGLAGYLSFRDSVDGDILLNFSGAVASVFKLAVVVHLVLYIPSEVIVMRHSLYALRGEDVMAAEFEQVAWVTFALLALVVGAVIGLNTVGIAQGDLFGYILDVTGGVSASVTSFILPGLIYL 426 G+ +C+ GL+GYLSFR + +G+ILLNFSG A K +V HL+LYIP + +VMRHSL L ++ ++ LLA+ V+ L + G+A+G+LF ++ +TGGV+ + SF+LPG ++L Sbjct: 292 GTFMCFITGLSGYLSFRSATNGEILLNFSGGWAYFTKTLLVAHLLLYIPIDFVVMRHSLVKLFNKEAEKLHTAPFIVLSVMLLAVTTALVVFLYSKGLAEGELFSSVISLTGGVALAFVSFVLPGAVFL 420
BLAST of mRNA_L-elsbetiae_contig10186.234.1 vs. uniprot
Match: A0A7S3M027_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M027_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 1.380e-13 Identity = 37/79 (46.84%), Postives = 54/79 (68.35%), Query Frame = 1 Query: 4 AWRSVATWSIGGGSCLCYAMGLAGYLSFRDSVDGDILLNFSGAVASVFKLAVVVHLVLYIPSEVIVMRHSLYALRGEDV 240 ++ +VA ++G G+ +C+ GLAGYLSF D +IL NFSG + VFK A+V+HL+LYIP + ++MR S+ L DV Sbjct: 26 SFNTVAKTTMGLGAMMCFFTGLAGYLSFGDDTKSNILENFSGPLGGVFKTALVIHLLLYIPGDFVIMRDSILKLAHVDV 104
BLAST of mRNA_L-elsbetiae_contig10186.234.1 vs. uniprot
Match: A0A161HG67_9ASCO (Avt2p n=1 Tax=Sugiyamaella lignohabitans TaxID=796027 RepID=A0A161HG67_9ASCO) HSP 1 Score: 56.6 bits (135), Expect = 1.570e-6 Identity = 47/139 (33.81%), Postives = 75/139 (53.96%), Query Frame = 1 Query: 16 VATWSIGGGSCLCYAMGLAGYLSFRDSVDGDILLNF--SGAVASVFKLAVVVHLVLYIPSEVIVMRHSLYALRGEDVMAAEFEQVAWVTFALLALVVGAVIGLNTVGIAQGDLFGYILDVTGGVSASVTSFILPGLIYL 426 V WS G C AMGLAG+L F+D+ G++L NF + +A+V + ++++ +P E+ V R ++ D A +Q A +T L L+V A+ TV + +L G IL++ G SA ++ILP + YL Sbjct: 363 VTHWSTGVSMVACMAMGLAGFLVFKDNTKGNVLNNFPPNDTMANVARFCFGLNMLTTLPLEIFVCREVIWIYFFPDGPIATTKQHAILT---LTLIVSAM----TVSLFTCNL-GAILELVGASSACTMAYILPPMCYL 493
BLAST of mRNA_L-elsbetiae_contig10186.234.1 vs. uniprot
Match: D8LFS5_ECTSI (Aa_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFS5_ECTSI) HSP 1 Score: 53.1 bits (126), Expect = 2.430e-5 Identity = 43/153 (28.10%), Postives = 75/153 (49.02%), Query Frame = 1 Query: 7 WRSVATWSIGGGSCLCYAMGLAGYLSFRDSVDGDILLNFSGA--VASVFKLAVVVHLVLYIPSEVIVMRHSLYAL-------RGEDVMAAEFEQVAWVTFALLALVVGAVIGLNTVGIAQGDLFGYILDVTGGVSASVTSFILPGLIYLGATG 438 W +V W++ + +G+AGYLSF D +G+IL NF+ A+V + + + +VL P E+ V RH L A +G + W+T + L + T+ ++ +L G +L++ G AS ++LP L+Y+ + G Sbjct: 264 WATVTRWAVSIALVMSLTLGVAGYLSFADGTEGNILNNFTHEHRPATVARAFLALTMVLTYPLEMYVARHVLDASLFQTCLGKGPITTVRHY----WITVIIWVLTL-------TLALSTANL-GSVLEIFGAFGASAIGYVLPPLLYMKSCG 404 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10186.234.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10186.234.1 >prot_L-elsbetiae_contig10186.234.1 ID=prot_L-elsbetiae_contig10186.234.1|Name=mRNA_L-elsbetiae_contig10186.234.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=147bp RAWRSVATWSIGGGSCLCYAMGLAGYLSFRDSVDGDILLNFSGAVASVFKback to top mRNA from alignment at L-elsbetiae_contig10186:4173..6877- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10186.234.1 ID=mRNA_L-elsbetiae_contig10186.234.1|Name=mRNA_L-elsbetiae_contig10186.234.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2705bp|location=Sequence derived from alignment at L-elsbetiae_contig10186:4173..6877- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10186:4173..6877- >mRNA_L-elsbetiae_contig10186.234.1 ID=mRNA_L-elsbetiae_contig10186.234.1|Name=mRNA_L-elsbetiae_contig10186.234.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=882bp|location=Sequence derived from alignment at L-elsbetiae_contig10186:4173..6877- (Laminarionema elsbetiae ELsaHSoW15)back to top |