prot_L-elsbetiae_contig1294.2329.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig1294.2329.1
Unique Name	prot_L-elsbetiae_contig1294.2329.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	101

Homology

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BLAST of mRNA_L-elsbetiae_contig1294.2329.1 vs. uniprot
Match: D7FNU5_ECTSI (Elongin-C n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNU5_ECTSI)

HSP 1 Score: 198 bits (504), Expect = 2.020e-64
Identity = 99/100 (99.00%), Postives = 99/100 (99.00%), Query Frame = 0

Query:    1 MAMEDQEFVKLVSAEGAEFWVDRKCAMVSGTIKAMLSGGFGEAASGQVHFAEISTPILEKVIQFVYYKVRYTNSATRIPEFHIEPELALELLMAANFLDC 100
            MA EDQEFVKLVSAEGAEFWVDRKCAMVSGTIKAMLSGGFGEAASGQVHFAEISTPILEKVIQFVYYKVRYTNSATRIPEFHIEPELALELLMAANFLDC
Sbjct:    1 MATEDQEFVKLVSAEGAEFWVDRKCAMVSGTIKAMLSGGFGEAASGQVHFAEISTPILEKVIQFVYYKVRYTNSATRIPEFHIEPELALELLMAANFLDC 100

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BLAST of mRNA_L-elsbetiae_contig1294.2329.1 vs. uniprot
Match: A0A6U1KLA4_9STRA (Elongin-C n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6U1KLA4_9STRA)

HSP 1 Score: 138 bits (347), Expect = 3.050e-40
Identity = 69/94 (73.40%), Postives = 79/94 (84.04%), Query Frame = 0

Query:    7 EFVKLVSAEGAEFWVDRKCAMVSGTIKAMLSGGFGEAASGQVHFAEISTPILEKVIQFVYYKVRYTNSATRIPEFHIEPELALELLMAANFLDC 100
            ++VKL+SAEG EF+VDR+CA  SGTIKAMLSG F E+ SG++ F EISTPILEKVIQ+ YYK  Y NS  RIPEF IEPE+ALELLMAANFLDC
Sbjct:   26 QYVKLISAEGHEFFVDRQCAQTSGTIKAMLSGSFTES-SGEIKFPEISTPILEKVIQYFYYKASYKNSQVRIPEFAIEPEVALELLMAANFLDC 118

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BLAST of mRNA_L-elsbetiae_contig1294.2329.1 vs. uniprot
Match: A0A1V9Z8H2_9STRA (Elongin-C n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9Z8H2_9STRA)

HSP 1 Score: 137 bits (344), Expect = 5.220e-40
Identity = 68/94 (72.34%), Postives = 81/94 (86.17%), Query Frame = 0

Query:    7 EFVKLVSAEGAEFWVDRKCAMVSGTIKAMLSGGFGEAASGQVHFAEISTPILEKVIQFVYYKVRYTNSATRIPEFHIEPELALELLMAANFLDC 100
            E+VKL+SAEG EF+V RKCA+VSGTIKAMLSG F E+  G+V F +IS PILEKVIQ++YYK RY+NS  RIP+F IEPE+ALELLMAAN+LDC
Sbjct:    9 EYVKLISAEGHEFFVARKCALVSGTIKAMLSGHFSES-KGEVRFPDISAPILEKVIQYMYYKKRYSNSNARIPDFGIEPEMALELLMAANYLDC 101

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BLAST of mRNA_L-elsbetiae_contig1294.2329.1 vs. uniprot
Match: A0A1W0A8X8_9STRA (Elongin-C n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A8X8_9STRA)

HSP 1 Score: 137 bits (344), Expect = 5.890e-40
Identity = 68/100 (68.00%), Postives = 84/100 (84.00%), Query Frame = 0

Query:    1 MAMEDQEFVKLVSAEGAEFWVDRKCAMVSGTIKAMLSGGFGEAASGQVHFAEISTPILEKVIQFVYYKVRYTNSATRIPEFHIEPELALELLMAANFLDC 100
            MA  + E+VKLVSAEG EF+V RKCA+VSGTIKAML G F E+  G++ F +IS PILEKVIQ++YYK RY+NS  RIPEF+IEPE++LELLMAAN+L+C
Sbjct:    7 MADTESEYVKLVSAEGHEFYVARKCALVSGTIKAMLLGQFSES-KGEIRFPDISAPILEKVIQYLYYKKRYSNSNARIPEFNIEPEMSLELLMAANYLEC 105

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BLAST of mRNA_L-elsbetiae_contig1294.2329.1 vs. uniprot
Match: A0A7S2XYA0_9STRA (Elongin-C n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYA0_9STRA)

HSP 1 Score: 135 bits (341), Expect = 1.690e-39
Identity = 69/98 (70.41%), Postives = 80/98 (81.63%), Query Frame = 0

Query:    3 MEDQEFVKLVSAEGAEFWVDRKCAMVSGTIKAMLSGGFGEAASGQVHFAEISTPILEKVIQFVYYKVRYTNSATRIPEFHIEPELALELLMAANFLDC 100
            M     VKLVS+EG EF+ DR+CAMVSGTI AMLSG F E+  G+V F EIS+ ILEK+IQ+ YYKVRYTNS +RIP+F IEPE+ALELLMAANFLDC
Sbjct:    9 MPKSRMVKLVSSEGHEFYCDRRCAMVSGTINAMLSGQFAESR-GEVTFPEISSAILEKIIQYCYYKVRYTNSTSRIPDFPIEPEIALELLMAANFLDC 105

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BLAST of mRNA_L-elsbetiae_contig1294.2329.1 vs. uniprot
Match: A0A6G0WB49_9STRA (Elongin-C n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WB49_9STRA)

HSP 1 Score: 135 bits (340), Expect = 2.260e-39
Identity = 65/94 (69.15%), Postives = 81/94 (86.17%), Query Frame = 0

Query:    7 EFVKLVSAEGAEFWVDRKCAMVSGTIKAMLSGGFGEAASGQVHFAEISTPILEKVIQFVYYKVRYTNSATRIPEFHIEPELALELLMAANFLDC 100
            ++VKL+SAEG EF+V RKCAMVSGTIKAML+G F E+  G+V F +IS PILEK+IQ+ Y+KVRY+NS  R+P+F IEPE+ALELLMAAN+LDC
Sbjct:   11 DYVKLISAEGQEFYVARKCAMVSGTIKAMLTGHFSES-KGEVRFPDISAPILEKIIQYFYFKVRYSNSNARLPDFTIEPEIALELLMAANYLDC 103

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BLAST of mRNA_L-elsbetiae_contig1294.2329.1 vs. uniprot
Match: L8GYQ9_ACACA (Elongin-C n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GYQ9_ACACA)

HSP 1 Score: 134 bits (337), Expect = 6.460e-39
Identity = 70/93 (75.27%), Postives = 79/93 (84.95%), Query Frame = 0

Query:    9 VKLVSAEGAEFWVDRKCAMVSGTIKAMLSGG--FGEAASGQVHFAEISTPILEKVIQFVYYKVRYTNSATRIPEFHIEPELALELLMAANFLD 99
            VKL+SA+G EF VDRK AMVSGTIK+MLSG   F E A G+++F EISTPILEKVIQ+ YYK+RYTNS T IPEF IEPE+ALELLMAANFLD
Sbjct:   10 VKLISADGHEFVVDRKAAMVSGTIKSMLSGPGTFTEQAMGEINFREISTPILEKVIQYFYYKLRYTNSTTEIPEFPIEPEVALELLMAANFLD 102

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BLAST of mRNA_L-elsbetiae_contig1294.2329.1 vs. uniprot
Match: K8Z122_NANGC (Elongin-C n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z122_NANGC)

HSP 1 Score: 134 bits (336), Expect = 8.140e-39
Identity = 68/100 (68.00%), Postives = 84/100 (84.00%), Query Frame = 0

Query:    3 MEDQ--EFVKLVSAEGAEFWVDRKCAMVSGTIKAMLSGGFGEAASGQVHFAEISTPILEKVIQFVYYKVRYTNSATRIPEFHIEPELALELLMAANFLDC 100
            MED   ++VKL+SAEG EF VDRKCA VS TI+AML+G F E+  G+++F EIST ILEKVIQ++YYKVRYTNS  ++P+F +EPE+ALELLMAANFLDC
Sbjct:    1 MEDDASKYVKLISAEGHEFIVDRKCACVSKTIEAMLAGNFAES-KGEINFPEISTNILEKVIQYLYYKVRYTNSPQKVPDFKMEPEIALELLMAANFLDC 99

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BLAST of mRNA_L-elsbetiae_contig1294.2329.1 vs. uniprot
Match: F0YER3_AURAN (Elongin-C (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YER3_AURAN)

HSP 1 Score: 133 bits (335), Expect = 9.380e-39
Identity = 67/92 (72.83%), Postives = 75/92 (81.52%), Query Frame = 0

Query:   13 SAEGAEFWVDRKCAMVSGTIKAMLSGGFGEA----ASGQVHFAEISTPILEKVIQFVYYKVRYTNSATRIPEFHIEPELALELLMAANFLDC 100
            SAEG EFWVDRKCA  SGTIKAMLSG  G      +SG++ F EISTPILEKVIQ+ YYK+RYTNS  RIPEF I+PE+ALELLMA+NFLDC
Sbjct:    1 SAEGHEFWVDRKCANTSGTIKAMLSGPRGPRQFTESSGEIKFPEISTPILEKVIQYFYYKLRYTNSQVRIPEFQIDPEMALELLMASNFLDC 92

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BLAST of mRNA_L-elsbetiae_contig1294.2329.1 vs. uniprot
Match: A0A485K8T6_9STRA (Elongin-C n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K8T6_9STRA)

HSP 1 Score: 131 bits (330), Expect = 8.000e-38
Identity = 63/94 (67.02%), Postives = 79/94 (84.04%), Query Frame = 0

Query:    7 EFVKLVSAEGAEFWVDRKCAMVSGTIKAMLSGGFGEAASGQVHFAEISTPILEKVIQFVYYKVRYTNSATRIPEFHIEPELALELLMAANFLDC 100
            E+VKL+SAEG EF++ RKCAMVSGTIKAML+G F E+  G++ F +I   +LEKVIQ++YYK RY+NS  RIP+F IEPE+ALELLMAAN+LDC
Sbjct:   13 EYVKLISAEGHEFYIARKCAMVSGTIKAMLTGHFSES-KGEIRFPDIGASVLEKVIQYMYYKKRYSNSNARIPDFAIEPEIALELLMAANYLDC 105

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig1294.2329.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig1294.2329.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FNU5_ECTSI	2.020e-64	99.00	Elongin-C n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN...	[more]
A0A6U1KLA4_9STRA	3.050e-40	73.40	Elongin-C n=1 Tax=Pelagomonas calceolata TaxID=356...	[more]
A0A1V9Z8H2_9STRA	5.220e-40	72.34	Elongin-C n=3 Tax=Saprolegniaceae TaxID=4764 RepID...	[more]
A0A1W0A8X8_9STRA	5.890e-40	68.00	Elongin-C n=1 Tax=Thraustotheca clavata TaxID=7455...	[more]
A0A7S2XYA0_9STRA	1.690e-39	70.41	Elongin-C n=1 Tax=Fibrocapsa japonica TaxID=94617 ...	[more]
A0A6G0WB49_9STRA	2.260e-39	69.15	Elongin-C n=1 Tax=Aphanomyces euteiches TaxID=1008...	[more]
L8GYQ9_ACACA	6.460e-39	75.27	Elongin-C n=1 Tax=Acanthamoeba castellanii str. Ne...	[more]
K8Z122_NANGC	8.140e-39	68.00	Elongin-C n=2 Tax=Monodopsidaceae TaxID=425072 Rep...	[more]
F0YER3_AURAN	9.380e-39	72.83	Elongin-C (Fragment) n=1 Tax=Aureococcus anophagef...	[more]
A0A485K8T6_9STRA	8.000e-38	67.02	Elongin-C n=1 Tax=Aphanomyces stellatus TaxID=1203...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001232	S-phase kinase-associated protein 1-like	SMART	SM00512	skp1_3	coord: 6..100 e-value: 1.5E-13 score: 61.0
IPR016073	SKP1 component, POZ domain	PFAM	PF03931	Skp1_POZ	coord: 8..68 e-value: 3.1E-10 score: 40.1
None	No IPR available	GENE3D	3.30.710.10		coord: 6..100 e-value: 1.1E-29 score: 104.8
IPR039948	Elongin-C	PANTHER	PTHR20648	FAMILY NOT NAMED	coord: 2..100
IPR011333	SKP1/BTB/POZ domain superfamily	SUPERFAMILY	54695	POZ domain	coord: 5..100

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig1294	contig	L-elsbetiae_contig1294:1626..8972 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig1294.2329.1	mRNA_L-elsbetiae_contig1294.2329.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig1294 475..8994 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig1294.2329.1 ID=prot_L-elsbetiae_contig1294.2329.1|Name=mRNA_L-elsbetiae_contig1294.2329.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=101bp
MAMEDQEFVKLVSAEGAEFWVDRKCAMVSGTIKAMLSGGFGEAASGQVHF
AEISTPILEKVIQFVYYKVRYTNSATRIPEFHIEPELALELLMAANFLDC
*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001232	SKP1-like
IPR016073	Skp1_comp_POZ
IPR039948	ELC1
IPR011333	SKP1/BTB/POZ_sf