prot_L-elsbetiae_contig12931.2325.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig12931.2325.1
Unique Nameprot_L-elsbetiae_contig12931.2325.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length380
Homology
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BLAST of mRNA_L-elsbetiae_contig12931.2325.1 vs. uniprot
Match: D8LKF5_ECTSI (PHD-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKF5_ECTSI)

HSP 1 Score: 403 bits (1036), Expect = 9.840e-132
Identity = 290/371 (78.17%), Postives = 309/371 (83.29%), Query Frame = 0 
Query:    1 MQIQQWVKEVKVLAATDTXXXXXXXXXXXXXXXXXQDRYASLKELLARREELEAPLEEDXXXXXXXXXXXXXXXXXXXXXRGXXXXXXXXXXXXXXXXXXXXEEEESKVVHGMGGVYAEASAVLEAVAEESDRAEAAVDAWFDEHPEAYYKKSDGGARLGYWKTSRAPLEAEVGRLEALVASARAARAGPXXXXXXXXXXXXXXXXXLRAGXXXXXXXXXXXXXXXARLPAFGEVSALLDNAEEGMATSADRRGRANTAWQHVNDIRSMARQWIRRAKTCLRADGAAAGVTLAVMRRHLSSGDAVPVDMPEYHELERVASEWEAWESRALSCASKLEAIPLEDLAETVTACTPSTPGEP-QGQEDASALLR 370
            MQIQQWVKEVKVLAAT+T XXXXXXXXXXXXXXXX  RYAS+K+LLARREELEAPLE  XXXXXXXXXXXXXXXXXXXXX  XXXXXXXXXXXXXXXXXX  +EE+ KVVHGMGGVYAEASA+LE+VAEESDRAE AVD WFDEHPE YYKKSDGGARLGYWKTS +PLEAEVG+LE LVASAR+ARAGP                 L+A            X   A LPAF EVSALLDNA E MATSADRRGRANTAWQHVNDIRSMA QWIRRAKTCLRADGAAAGVTLAVMRRHLSSGDAVPVDMPEYHELERVA+EWEAWESRAL CA+ LEA+PLEDLA T+T C+P+ PGE  +  EDAS LL+
Sbjct:  238 MQIQQWVKEVKVLAATNTAXXXXXXXXXXXXXXXXXARYASVKDLLARREELEAPLEXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXAGDEEDGKVVHGMGGVYAEASALLESVAEESDRAEGAVDEWFDEHPEPYYKKSDGGARLGYWKTSVSPLEAEVGQLEQLVASARSARAGPPAAVAAAEDALAAARWVLKA---VVLLTGGAGXAGAAGLPAFSEVSALLDNAGEAMATSADRRGRANTAWQHVNDIRSMATQWIRRAKTCLRADGAAAGVTLAVMRRHLSSGDAVPVDMPEYHELERVATEWEAWESRALRCAATLEAVPLEDLAGTLTVCSPTPPGENGKADEDASGLLQ 604
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BLAST of mRNA_L-elsbetiae_contig12931.2325.1 vs. uniprot
Match: A0A6H5KV96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV96_9PHAE)

HSP 1 Score: 233 bits (595), Expect = 1.860e-71
Identity = 209/273 (76.56%), Postives = 218/273 (79.85%), Query Frame = 0 
Query:    1 MQIQQWVKEVKVLAATDTXXXXXXXXXXXXXXXXXQDRYASLKELLARREELEAPLEEDXXXXXXXXXXXXXXXXXXXXXRGXXXXXXXXXXXXXXXXXXXXEEEESKVVHGMGGVYAEASAVLEAVAEESDRAEAAVDAWFDEHPEAYYKKSDGGARLGYWKTSRAPLEAEVGRLEALVASARAARAGPXXXXXXXXXXXXXXXXXLRA------GXXXXXXXXXXXXXXXARLPAFGEVSALLDNAEEGMATSADRRGRANTAWQHVNDIR 267
            MQIQQWVKEVKVLAAT+T   XXXXXXXXXXXXXX   YASLKELLARREELEAPL   XXXXXXXXXXXXXXXXXXXXX  XXXXXXXXXXXXXXXXXX  +EE+ KVVHGMGGVYAEASA+LE+VAEESDRAE AVD WFDEHPE YYKKSDGGARLGYWKTS   LEAEVG+LE LVA+AR+ARAGP                 L+A      G      XXXXXXXXX  LPAF EVSALLDNA E MATSADRRGRANTAWQHVNDIR
Sbjct:    1 MQIQQWVKEVKVLAATNTAGAXXXXXXXXXXXXXXXXXYASLKELLARREELEAPL--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGDEEDGKVVHGMGGVYAEASALLESVAEESDRAEGAVDEWFDEHPEPYYKKSDGGARLGYWKTSVGTLEAEVGQLEKLVATARSARAGPPAAVAAAEDALAAARWVLKAVVLLTGGAGGGAPXXXXXXXXXXGLPAFSEVSALLDNAGEAMATSADRRGRANTAWQHVNDIR 271
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12931.2325.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LKF5_ECTSI9.840e-13278.17PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KV96_9PHAE1.860e-7176.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 32..62
NoneNo IPR availableCOILSCoilCoilcoord: 117..137
IPR013637Lysine-specific demethylase-like domainPFAMPF08429PLU-1coord: 244..364
e-value: 1.7E-7
score: 30.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12931contigL-elsbetiae_contig12931:822..5202 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12931.2325.1mRNA_L-elsbetiae_contig12931.2325.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig12931 822..5217 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig12931.2325.1 ID=prot_L-elsbetiae_contig12931.2325.1|Name=mRNA_L-elsbetiae_contig12931.2325.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=380bp
MQIQQWVKEVKVLAATDTTAAAAAAVFDTAAAAAAQDRYASLKELLARRE
ELEAPLEEDEEEDGDGGGAGAAKGSKGKSGRGGGKGGGSGGTSSGGSDAG
DDEEEESKVVHGMGGVYAEASAVLEAVAEESDRAEAAVDAWFDEHPEAYY
KKSDGGARLGYWKTSRAPLEAEVGRLEALVASARAARAGPPAAVAAAEDA
LAAARWALRAGGGGGGGGGGGGGGGGARLPAFGEVSALLDNAEEGMATSA
DRRGRANTAWQHVNDIRSMARQWIRRAKTCLRADGAAAGVTLAVMRRHLS
SGDAVPVDMPEYHELERVASEWEAWESRALSCASKLEAIPLEDLAETVTA
CTPSTPGEPQGQEDASALLRGMGVCTLHT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013637Lys_sp_deMease-like_dom