prot_L-elsbetiae_contig1287.2286.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig1287.2286.1
Unique Name	prot_L-elsbetiae_contig1287.2286.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	211

Homology

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BLAST of mRNA_L-elsbetiae_contig1287.2286.1 vs. uniprot
Match: A0A6H5J7K3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7K3_9PHAE)

HSP 1 Score: 255 bits (652), Expect = 8.350e-76
Identity = 154/201 (76.62%), Postives = 175/201 (87.06%), Query Frame = 0

Query:    1 RRARSLAEGSLQQLEMTYNQLEDSEREKRAAGILKMKHDMQALARAQFAEANKQHAALKAKLERSEAQTRLLGEAAKDKDSQIKAAARKADELQGQVEALQKAQAESAADASRMESLLXXXXXXXXXXEAESRLDELEAMARERDSANNGRDVSQDALARMAIRNTQMKESVADLEGKVKELEGFCTEALDELDAEKAKNA 201
            RRARSLAE  LQQLE  YN+LEDSEREKRAAGILKMK+DM+ALA+ QFA ANKQHAAL+A+LERSEAQ RLL EAAKD +++++ A +K+ EL+GQVEALQK +AE+AA+ASR E +L          EAESRLDE+EAMARERD+ANNGRDVSQDALARMAIRNTQ+KESVADLEGKVKELEGFCTEALDELD EKAKNA
Sbjct:  810 RRARSLAESKLQQLEAAYNKLEDSEREKRAAGILKMKNDMKALAQQQFAGANKQHAALRARLERSEAQIRLLEEAAKDLNAKLETAGQKSTELRGQVEALQKEKAEAAANASRREHVLQQEATALRN-EAESRLDEMEAMARERDAANNGRDVSQDALARMAIRNTQLKESVADLEGKVKELEGFCTEALDELDREKAKNA 1009

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BLAST of mRNA_L-elsbetiae_contig1287.2286.1 vs. uniprot
Match: D7FRV0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV0_ECTSI)

HSP 1 Score: 254 bits (648), Expect = 3.830e-75
Identity = 152/209 (72.73%), Postives = 177/209 (84.69%), Query Frame = 0

Query:    1 RRARSLAEGSLQQLEMTYNQLEDSEREKRAAGILKMKHDMQALARAQFAEANKQHAALKAKLERSEAQTRLLGEAAKDKDSQIKAAARKADELQGQVEALQKAQAESAADASRMESLLXXXXXXXXXXEAESRLDELEAMARERDSANNGRDVSQDALARMAIRNTQMKESVADLEGKVKELEGFCTEALDELDAEKAKNARLLLAAGG 209
            RRARSLAE  LQQLE+ YN+LEDSEREKRAAGILKMK+DM+ALA+ QFA ANKQHAAL+A+LERSEAQTRLL EAAK+ +++++ A +K+ EL GQVEALQ  + E+AA ASR E +L          +AESRLDE+EAMARERD+AN+GRDVSQDALARMAIRNTQ+KESVADLEGKVKELEGFCTEALDELD EK KNA+ + A GG
Sbjct:  825 RRARSLAESRLQQLEVAYNKLEDSEREKRAAGILKMKNDMKALAQQQFAGANKQHAALRARLERSEAQTRLLEEAAKEFNAKLETAGQKSTELSGQVEALQNEKVEAAASASRREHVLQQEATALRN-DAESRLDEMEAMARERDAANSGRDVSQDALARMAIRNTQLKESVADLEGKVKELEGFCTEALDELDREKVKNAKRIFAEGG 1032

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig1287.2286.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig1287.2286.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5J7K3_9PHAE	8.350e-76	76.62	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FRV0_ECTSI	3.830e-75	72.73	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 48..68
None	No IPR available	COILS	Coil	Coil	coord: 127..147
None	No IPR available	COILS	Coil	Coil	coord: 76..110
None	No IPR available	COILS	Coil	Coil	coord: 4..31

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig1287	contig	L-elsbetiae_contig1287:226..6490 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig1287.2286.1	mRNA_L-elsbetiae_contig1287.2286.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig1287 226..6490 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig1287.2286.1 ID=prot_L-elsbetiae_contig1287.2286.1|Name=mRNA_L-elsbetiae_contig1287.2286.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=211bp
RRARSLAEGSLQQLEMTYNQLEDSEREKRAAGILKMKHDMQALARAQFAE
ANKQHAALKAKLERSEAQTRLLGEAAKDKDSQIKAAARKADELQGQVEAL
QKAQAESAADASRMESLLREEASALSREEAESRLDELEAMARERDSANNG
RDVSQDALARMAIRNTQMKESVADLEGKVKELEGFCTEALDELDAEKAKN
ARLLLAAGGN*