mRNA_L-elsbetiae_contig10.22.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10.22.1 vs. uniprot
Match: D1J796_ECTSI (ATP synthase subunit delta, chloroplastic n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D1J796_ECTSI) HSP 1 Score: 356 bits (914), Expect = 1.620e-123 Identity = 184/204 (90.20%), Postives = 196/204 (96.08%), Query Frame = 1 Query: 1 MANTMFGSKIANPYSEALLQLGLDLYLKEENADTQVFFQIIFDMENLLNILKITPTLEKYLANPLVADKDKKNVLIKCLTTKTSSTTISFLMLLVKNKRIGFLQIITQTFLNKAYDFVCLKFVEVYSASVLSKDQKNQLVEKLKILLGPEFTTSKTYYSKINVTFRIDKEILGGFIIKVDSKIIDLSLRGELEGLARKMEINLL 612 MANTMFG+KIANPYSEALLQLGLDLYLKE+NADTQVFFQIIFDMENLL ILKITPTLEKYLANPL+ DKDKKNVL KCLTTKTS+TT +FLMLLV KRIGF+QIITQTFLNKAY+FVCLKFVEVYSAS+LSKDQK QLVEKLKILLGPEFTTSK YYSKINVTF+IDKE+LGGFIIKVDSKIIDLSLRGE+EGLAR+MEINLL Sbjct: 1 MANTMFGAKIANPYSEALLQLGLDLYLKEDNADTQVFFQIIFDMENLLTILKITPTLEKYLANPLIKDKDKKNVLNKCLTTKTSATTKNFLMLLVDKKRIGFIQIITQTFLNKAYNFVCLKFVEVYSASLLSKDQKAQLVEKLKILLGPEFTTSKVYYSKINVTFKIDKELLGGFIIKVDSKIIDLSLRGEIEGLARQMEINLL 204
BLAST of mRNA_L-elsbetiae_contig10.22.1 vs. uniprot
Match: A0A7T8G496_SCYLO (ATP synthase subunit delta, chloroplastic n=11 Tax=Phaeophyceae TaxID=2870 RepID=A0A7T8G496_SCYLO) HSP 1 Score: 348 bits (893), Expect = 2.570e-120 Identity = 179/204 (87.75%), Postives = 193/204 (94.61%), Query Frame = 1 Query: 1 MANTMFGSKIANPYSEALLQLGLDLYLKEENADTQVFFQIIFDMENLLNILKITPTLEKYLANPLVADKDKKNVLIKCLTTKTSSTTISFLMLLVKNKRIGFLQIITQTFLNKAYDFVCLKFVEVYSASVLSKDQKNQLVEKLKILLGPEFTTSKTYYSKINVTFRIDKEILGGFIIKVDSKIIDLSLRGELEGLARKMEINLL 612 MANTMFGSKIANPYSEALLQLGLDLYLKEENADTQVFFQIIFDMENLL +LK+TPTLEKYLANPL+ DK+KK+VL KCLT KTS TT FLMLLV KRIGFL+IITQTFLNKAY+FVCLKFVEVYSAS+LSKDQK QL+EKLKILLGPEFTTSK YYSKINVTF+IDKEILGGFIIKVDSKIIDLSLRGELEGLA++ME++LL Sbjct: 1 MANTMFGSKIANPYSEALLQLGLDLYLKEENADTQVFFQIIFDMENLLTLLKLTPTLEKYLANPLIKDKEKKDVLNKCLTAKTSPTTKHFLMLLVDKKRIGFLEIITQTFLNKAYNFVCLKFVEVYSASLLSKDQKTQLIEKLKILLGPEFTTSKVYYSKINVTFKIDKEILGGFIIKVDSKIIDLSLRGELEGLAKQMEVSLL 204
BLAST of mRNA_L-elsbetiae_contig10.22.1 vs. uniprot
Match: A0A0R6MDT5_UNDPI (ATP synthase subunit delta, chloroplastic n=23 Tax=Phaeophyceae TaxID=2870 RepID=A0A0R6MDT5_UNDPI) HSP 1 Score: 342 bits (876), Expect = 1.000e-117 Identity = 178/204 (87.25%), Postives = 189/204 (92.65%), Query Frame = 1 Query: 1 MANTMFGSKIANPYSEALLQLGLDLYLKEENADTQVFFQIIFDMENLLNILKITPTLEKYLANPLVADKDKKNVLIKCLTTKTSSTTISFLMLLVKNKRIGFLQIITQTFLNKAYDFVCLKFVEVYSASVLSKDQKNQLVEKLKILLGPEFTTSKTYYSKINVTFRIDKEILGGFIIKVDSKIIDLSLRGELEGLARKMEINLL 612 MANTMFGSKIANPYSEALLQLGL+LYLKEENADTQVFFQIIFDMENLL ILK+TP LEKYLANPL+ DKDKKNVL KCL KTSSTT +FLMLLV KRIGFLQII QTFLNKAYDFVCLKFVEVYSAS LSK+Q+ QL EKLKILLGPEFTTSK YYSKIN+TFRIDKEILGGFIIKVDSKIIDLSLRGELE LA++ME++LL Sbjct: 1 MANTMFGSKIANPYSEALLQLGLNLYLKEENADTQVFFQIIFDMENLLTILKLTPVLEKYLANPLIQDKDKKNVLEKCLPKKTSSTTKNFLMLLVDKKRIGFLQIIIQTFLNKAYDFVCLKFVEVYSASPLSKEQQTQLKEKLKILLGPEFTTSKVYYSKINITFRIDKEILGGFIIKVDSKIIDLSLRGELESLAKQMEVSLL 204
BLAST of mRNA_L-elsbetiae_contig10.22.1 vs. uniprot
Match: A0A8F0FAK1_9PHAE (CF1 subunit delta n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FAK1_9PHAE) HSP 1 Score: 331 bits (848), Expect = 1.850e-113 Identity = 171/204 (83.82%), Postives = 187/204 (91.67%), Query Frame = 1 Query: 1 MANTMFGSKIANPYSEALLQLGLDLYLKEENADTQVFFQIIFDMENLLNILKITPTLEKYLANPLVADKDKKNVLIKCLTTKTSSTTISFLMLLVKNKRIGFLQIITQTFLNKAYDFVCLKFVEVYSASVLSKDQKNQLVEKLKILLGPEFTTSKTYYSKINVTFRIDKEILGGFIIKVDSKIIDLSLRGELEGLARKMEINLL 612 MANTMFG+KIANPYSEALLQLGL+LYLKEENADTQ+FFQIIFDMENLL ILK+TP LEKYL+NPL+ +KDKK+VL KCLT KTSSTT +FLMLLV KRIGF+ IITQTFLNKAYDFVCLKFVEV SA L K+QK +L+EKLKILLGPEFTTSK YYSKINVTF+IDKEILGGFIIKVDSKIIDLSLRGELE LA++ME NLL Sbjct: 1 MANTMFGAKIANPYSEALLQLGLNLYLKEENADTQIFFQIIFDMENLLAILKLTPVLEKYLSNPLIPNKDKKDVLEKCLTKKTSSTTKNFLMLLVDKKRIGFISIITQTFLNKAYDFVCLKFVEVCSAHSLDKEQKTKLIEKLKILLGPEFTTSKVYYSKINVTFKIDKEILGGFIIKVDSKIIDLSLRGELESLAKQMETNLL 204
BLAST of mRNA_L-elsbetiae_contig10.22.1 vs. uniprot
Match: D1GJI1_FUCVE (ATP synthase subunit delta, chloroplastic n=3 Tax=Fucaceae TaxID=3010 RepID=D1GJI1_FUCVE) HSP 1 Score: 326 bits (836), Expect = 1.240e-111 Identity = 168/204 (82.35%), Postives = 184/204 (90.20%), Query Frame = 1 Query: 1 MANTMFGSKIANPYSEALLQLGLDLYLKEENADTQVFFQIIFDMENLLNILKITPTLEKYLANPLVADKDKKNVLIKCLTTKTSSTTISFLMLLVKNKRIGFLQIITQTFLNKAYDFVCLKFVEVYSASVLSKDQKNQLVEKLKILLGPEFTTSKTYYSKINVTFRIDKEILGGFIIKVDSKIIDLSLRGELEGLARKMEINLL 612 MANTMFGSKIANPYSEALLQLGL+LYLKE+N DTQVFFQIIFDMENLL +LK+TP LEKYL+NPL+ D DKKNVL KC T KTS+TT FLMLLV KRIGFLQ I QTFLNKAYDFVCLKFVEVYSA L+K+QK QLVE+LKILLGPEFTTSK YYSKINVTFR+DKEILGGFIIKVDSKIIDLSLRGELE LA+++E +L+ Sbjct: 1 MANTMFGSKIANPYSEALLQLGLNLYLKEKNTDTQVFFQIIFDMENLLTLLKLTPVLEKYLSNPLIPDNDKKNVLEKCFTKKTSNTTKKFLMLLVDKKRIGFLQTIIQTFLNKAYDFVCLKFVEVYSAYPLNKEQKEQLVERLKILLGPEFTTSKVYYSKINVTFRVDKEILGGFIIKVDSKIIDLSLRGELECLAKQLETSLV 204
BLAST of mRNA_L-elsbetiae_contig10.22.1 vs. uniprot
Match: A0A1I9LVE7_9PHAE (ATP synthase subunit delta, chloroplastic n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVE7_9PHAE) HSP 1 Score: 317 bits (811), Expect = 8.260e-108 Identity = 165/205 (80.49%), Postives = 184/205 (89.76%), Query Frame = 1 Query: 1 MANTMFGSKIANPYSEALLQLGLDLYLKEENAD-TQVFFQIIFDMENLLNILKITPTLEKYLANPLVADKDKKNVLIKCLTTKTSSTTISFLMLLVKNKRIGFLQIITQTFLNKAYDFVCLKFVEVYSASVLSKDQKNQLVEKLKILLGPEFTTSKTYYSKINVTFRIDKEILGGFIIKVDSKIIDLSLRGELEGLARKMEINLL 612 MAN MFGSKIANPYS+ALLQLGLDLYLKE+NAD T+V F+IIFDMENLL ILKITP LEKYLANPL+ D +KKN+L KCL K S T +FLMLLV KRIGFLQIIT+TFLNKAY FVCLKF EVYSAS+L+K+QK +L++KLKILLGPEFTTSK YYSKINVTF+ID E+LGGFIIKVDSKIIDLSLRGE+EGLAR+MEINLL Sbjct: 1 MANMMFGSKIANPYSDALLQLGLDLYLKEKNADDTEVIFRIIFDMENLLIILKITPILEKYLANPLITDNEKKNILNKCLPVKGSPTVKNFLMLLVDKKRIGFLQIITETFLNKAYSFVCLKFAEVYSASLLNKEQKLELIKKLKILLGPEFTTSKVYYSKINVTFKIDPELLGGFIIKVDSKIIDLSLRGEIEGLARQMEINLL 205
BLAST of mRNA_L-elsbetiae_contig10.22.1 vs. uniprot
Match: A0A141BSE0_9PHAE (ATP synthase subunit delta, chloroplastic n=14 Tax=Sargassaceae TaxID=3014 RepID=A0A141BSE0_9PHAE) HSP 1 Score: 315 bits (806), Expect = 4.610e-107 Identity = 161/204 (78.92%), Postives = 185/204 (90.69%), Query Frame = 1 Query: 1 MANTMFGSKIANPYSEALLQLGLDLYLKEENADTQVFFQIIFDMENLLNILKITPTLEKYLANPLVADKDKKNVLIKCLTTKTSSTTISFLMLLVKNKRIGFLQIITQTFLNKAYDFVCLKFVEVYSASVLSKDQKNQLVEKLKILLGPEFTTSKTYYSKINVTFRIDKEILGGFIIKVDSKIIDLSLRGELEGLARKMEINLL 612 MANT+ G KIANPYSEALLQLGL+LYLKE+ ADTQVFFQIIFDMENLL +LK+TP LEKYL+NPL+ +DKKNVL KCLT KTS TT +FLMLLV KRIGF++ I Q FLNKAY+FVCLKFVEVYSASVL+++QK+QL+EKLKILLGP+F TSK YYSKINVTFRIDKEILGGFIIKVDSKIIDLSLRGEL+GLA+++E +L+ Sbjct: 1 MANTIVGFKIANPYSEALLQLGLNLYLKEDRADTQVFFQIIFDMENLLTLLKLTPVLEKYLSNPLIPGEDKKNVLEKCLTKKTSITTRNFLMLLVDKKRIGFIEPIIQIFLNKAYEFVCLKFVEVYSASVLTQNQKDQLIEKLKILLGPQFITSKVYYSKINVTFRIDKEILGGFIIKVDSKIIDLSLRGELDGLAKQLETSLI 204
BLAST of mRNA_L-elsbetiae_contig10.22.1 vs. uniprot
Match: A0A8F0F717_9PHAE (CF1 subunit delta n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F717_9PHAE) HSP 1 Score: 304 bits (778), Expect = 8.170e-103 Identity = 158/203 (77.83%), Postives = 178/203 (87.68%), Query Frame = 1 Query: 1 MANTMFGSKIANPYSEALLQLGLDLYLKEENADTQVFFQIIFDMENLLNILKITPTLEKYLANPLVADKDKKNVLIKCLTTKTSSTTISFLMLLVKNKRIGFLQIITQTFLNKAYDFVCLKFVEVYSASVLSKDQKNQLVEKLKILLGPEFTTSKTYYSKINVTFRIDKEILGGFIIKVDSKIIDLSLRGELEGLARKMEINL 609 M+N + GSKIANPY+EALLQLGL+LY++EEN DTQVFFQIIFDMENLL +LK+TP LE YL NPLV DK+KKNVL KCLT K SSTT +FLMLLV KRIGFL+ I QTFLNKAYDFVCLKFVEVYSA +L+K+QK QLVEKLKILLGPEFTTS YY KI V F +DKE+LGGFIIKVDSKIIDLSLRGEL+ LA++MEIN+ Sbjct: 1 MSNAIVGSKIANPYAEALLQLGLNLYIQEEN-DTQVFFQIIFDMENLLTLLKLTPVLEDYLGNPLVPDKNKKNVLEKCLTQKVSSTTRNFLMLLVDKKRIGFLEPIIQTFLNKAYDFVCLKFVEVYSAFLLTKEQKKQLVEKLKILLGPEFTTSTVYYPKITVVFNLDKEVLGGFIIKVDSKIIDLSLRGELQALAKQMEINI 202
BLAST of mRNA_L-elsbetiae_contig10.22.1 vs. uniprot
Match: A0A8E5XRC3_9PHAE (ATP synthase subunit delta, chloroplastic n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRC3_9PHAE) HSP 1 Score: 215 bits (548), Expect = 7.670e-68 Identity = 111/203 (54.68%), Postives = 154/203 (75.86%), Query Frame = 1 Query: 1 MANTMFGSKIANPYSEALLQLGLDLYLKEENADTQVFFQIIFDMENLLNILKITPTLEKYLANPLVADKDKKNVLIKCLTTKTSSTTISFLMLLVKNKRIGFLQIITQTFLNKAYDFVCLKFVEVYSASVLSKDQKNQLVEKLKILLGPEFTTSKT--YYSKINVTFRIDKEILGGFIIKVDSKIIDLSLRGELEGLARKMEI 603 M NT+ +KIA+PYSEAL QLGL LYLKE N + +FFQIIFD+++LL +L+ TP L++YL NPL++ K+KK +L KCL +TS T +FL LLV KRI F++II QTF++KAY+FVCLKFVE+ S LSK Q+ L+ KL+++LGPE T Y I ++ R+DK++LGGF+IK+ SKIIDLSL+GEL+ L++++ + Sbjct: 2 MTNTIINAKIASPYSEALFQLGLGLYLKENNPN--LFFQIIFDIQDLLTLLRATPVLQEYLVNPLISSKNKKVILEKCLREETSLHTKNFLNLLVDQKRIEFVEIIAQTFMDKAYEFVCLKFVEICSTYELSKAQQKALIRKLRVILGPEVTGPDVDVQYPNIALSLRVDKDLLGGFVIKIGSKIIDLSLKGELQELSKQLNV 202
BLAST of mRNA_L-elsbetiae_contig10.22.1 vs. uniprot
Match: A0A7S6ZPB6_9STRA (ATP synthase subunit delta, chloroplastic n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6ZPB6_9STRA) HSP 1 Score: 189 bits (481), Expect = 1.000e-57 Identity = 92/203 (45.32%), Postives = 147/203 (72.41%), Query Frame = 1 Query: 1 MANTMFGSKIANPYSEALLQLGLDLYLKEENADTQVFFQIIFDMENLLNILKITPTLEKYLANPLVADKDKKNVLIKCLTTKTSSTTISFLMLLVKNKRIGFLQIITQTFLNKAYDFVCLKFVEVYSASVLSKDQKNQLVEKLKILLGPEFTTSKTYYSKINVTFRIDKEILGGFIIKVDSKIIDLSLRGELEGLARKMEINL 609 M +GS I PY+EAL QLGL ++++ N+ FF+I+FDM++L +LK TP + +YL+NPL+++ +KK +L++CL K S+ T +FL LLV KRI +++ ITQ FL K Y+FVC+KF+++++ +S+ Q+ +L+ KL + L P+F+ K+N+T +IDK +LGGFI+ +DS+IIDLSL+GEL+ LA+++E+ L Sbjct: 1 MTTRKYGSNIGRPYAEALYQLGLSFFIEKNNSTE--FFKIVFDMQDLSTLLKTTPIVSEYLSNPLISNDNKKVILMQCLGKKASTNTKNFLKLLVDKKRISYIEGITQVFLEKIYNFVCIKFIDLWATYDVSEPQQQRLINKLILFLEPDFSKCHGKLPKVNLTVKIDKNLLGGFILVMDSQIIDLSLKGELQRLAKQLEVTL 201 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10.22.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10.22.1 >prot_L-elsbetiae_contig10.22.1 ID=prot_L-elsbetiae_contig10.22.1|Name=mRNA_L-elsbetiae_contig10.22.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=207bp MANTMFGSKIANPYSEALLQLGLDLYLKEENADTQVFFQIIFDMENLLNIback to top mRNA from alignment at L-elsbetiae_contig10:42453..43073+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10.22.1 ID=mRNA_L-elsbetiae_contig10.22.1|Name=mRNA_L-elsbetiae_contig10.22.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=621bp|location=Sequence derived from alignment at L-elsbetiae_contig10:42453..43073+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10:42453..43073+ >mRNA_L-elsbetiae_contig10.22.1 ID=mRNA_L-elsbetiae_contig10.22.1|Name=mRNA_L-elsbetiae_contig10.22.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1242bp|location=Sequence derived from alignment at L-elsbetiae_contig10:42453..43073+ (Laminarionema elsbetiae ELsaHSoW15)back to top |