mRNA_L-elsbetiae_contig10164.216.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10164.216.1 vs. uniprot
Match: D7G462_ECTSI (Nicolin 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G462_ECTSI) HSP 1 Score: 230 bits (587), Expect = 3.860e-72 Identity = 114/162 (70.37%), Postives = 128/162 (79.01%), Query Frame = 1 Query: 202 RKRIQRLDAIVFRNFYCSHITIKRRRQHFDPVPTATSTAAAGGVDGDPWVTILRDRPLMENPHHEDDAQYWHVVTADEFDREEYDAESTAPLRIYLYQPSPMWKAIELHHVKVISWSSAGSNGAKEDDNSLRSSGQRETDGHLEDLCRGISEQVEIFGDKRR 687 RK +RLDAIVF+NFYCSHITIK+RRQ FD T+TAA G DGDPW+TILRDRPLME+PHHEDDAQYWHVV ++EFD EEYDAESTAP+RIYLYQ SPMWK LHHVK + WS AGS+ DD +RE DG+L DLCRGISEQV+IFGDK R Sbjct: 48 RKPARRLDAIVFKNFYCSHITIKQRRQRFD-----TATAADCGKDGDPWLTILRDRPLMEDPHHEDDAQYWHVVRSEEFDPEEYDAESTAPIRIYLYQSSPMWKTFGLHHVKAVGWSRAGSSNGGRDD-------EREADGNLGDLCRGISEQVKIFGDKHR 197
BLAST of mRNA_L-elsbetiae_contig10164.216.1 vs. uniprot
Match: A0A0H5QY21_9EUKA (Uncharacterized protein (Fragment) n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5QY21_9EUKA) HSP 1 Score: 83.2 bits (204), Expect = 1.950e-15 Identity = 47/103 (45.63%), Postives = 57/103 (55.34%), Query Frame = 1 Query: 220 LDAIVFRNFYCSHITIKRRRQHFDPVPTATSTAAAGGVDGDP-WVTILRDRPLMENPHHEDDAQYWHVVTADEFDREEYDAESTAPLRIYLYQPSPMWKAIEL 525 +D IVFRNFYC +TI T + A G DG P W TILR LM +PH+EDDAQY H +++DEF+ LR YL QPSP WK+ L Sbjct: 41 IDHIVFRNFYCFALTI-------------TQSTANGSSDGAPYWTTILRSYKLMTDPHYEDDAQYSHRISSDEFEEPFSREVPVYALRFYLEQPSPNWKSFGL 130
BLAST of mRNA_L-elsbetiae_contig10164.216.1 vs. uniprot
Match: A0A6G0XAT5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XAT5_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 4.990e-8 Identity = 40/113 (35.40%), Postives = 54/113 (47.79%), Query Frame = 1 Query: 220 LDAIVFRNFYCSHITIKRRRQHFDPVPTATSTAAAGGVDGDPWVTILRDRPLMENPHHEDDAQYWHVVTADEFDREEYDAESTAPLRIYLYQPSPMWKAIELHHVKVISWSSA 558 L I F+N+Y + + I D V S IL R LM++ HHEDDAQ WH++ +E +D+ S L YL QPSP+W+ EL +KV S A Sbjct: 47 LSHITFQNYYVASLRI-------DQVINGRSDV------------ILEKRSLMDDAHHEDDAQNWHIIKREELGSH-FDSTSVEKLIFYLTQPSPLWEKWELRTLKVFETSEA 139
BLAST of mRNA_L-elsbetiae_contig10164.216.1 vs. uniprot
Match: W4GYG4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GYG4_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 6.150e-7 Identity = 37/99 (37.37%), Postives = 46/99 (46.46%), Query Frame = 1 Query: 250 CSHITIKRRRQHFDPVPTATSTAAAGGVDG---DPWVTILRDRPLMENPHHEDDAQYWHVVTADEFDREEYDAESTAPLRIYLYQPSPMWKAIELHHVK 537 C +T K +F V AA +D VTIL PLM++ HHE DAQ WH++ DEF D YL QPSP+W EL +K Sbjct: 40 CIEVTFKAPPANFSHVTFQNYYAATLRIDQVVQGKCVTILNRFPLMQDAHHEGDAQNWHIIKRDEFGAM-LDVARAERFIFYLLQPSPLWDKWELRSIK 137
BLAST of mRNA_L-elsbetiae_contig10164.216.1 vs. uniprot
Match: A0A024UMP9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UMP9_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 1.630e-6 Identity = 29/64 (45.31%), Postives = 37/64 (57.81%), Query Frame = 1 Query: 349 VTILRDRPLMENPHHEDDAQYWHVVTADEFDREEYDAESTAPLRIYLYQPSPMWKAIELHHVKV 540 VTIL LM+N HHEDDAQ WH++ +EF D YL QPSP+W+ EL +K+ Sbjct: 76 VTILDRFRLMQNAHHEDDAQNWHIIKREEFGAP-LDVAKAEHFIFYLLQPSPLWEKWELRSIKL 138
BLAST of mRNA_L-elsbetiae_contig10164.216.1 vs. uniprot
Match: A0A6A5AC89_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AC89_9STRA) HSP 1 Score: 56.6 bits (135), Expect = 1.940e-6 Identity = 28/63 (44.44%), Postives = 35/63 (55.56%), Query Frame = 1 Query: 349 VTILRDRPLMENPHHEDDAQYWHVVTADEFDREEYDAESTAPLRIYLYQPSPMWKAIELHHVK 537 +TIL PLM++ HHE DAQ WH++ DEF D YL QPSP+W EL +K Sbjct: 1 MTILNRFPLMQDAHHEGDAQNWHIIKRDEFGAM-LDVAGAERFIFYLLQPSPLWDKWELRSIK 62
BLAST of mRNA_L-elsbetiae_contig10164.216.1 vs. uniprot
Match: A0A665TWE0_ECHNA (Nicolin 1 n=3 Tax=Carangiformes TaxID=1489907 RepID=A0A665TWE0_ECHNA) HSP 1 Score: 56.2 bits (134), Expect = 1.150e-5 Identity = 30/107 (28.04%), Postives = 56/107 (52.34%), Query Frame = 1 Query: 220 LDAIVFRNFYCSHITIKRRRQHFDPVPTATSTAAAGGVDGDPWVTILRDRPLMENPHHEDDAQYWHVVTADEFDREEYDAESTAPLRIYLYQPSPMWKAIELHHVKV 540 ++ I F+N+Y +++T++ R+ P + A W T+LRD PLM+NPH E +Q ++ + + + + + A +R+ L QPS W L ++K+ Sbjct: 50 IEEITFKNYYTAYVTVRLLRRS----PGQDAPAK--------WCTVLRDLPLMDNPHTEGGSQDYYSIHRAQM---QVEPDHVASVRLILRQPSSAWLNFSLENIKI 141
BLAST of mRNA_L-elsbetiae_contig10164.216.1 vs. uniprot
Match: A0A3Q1JBV0_ANATE (Nicolin 1 n=1 Tax=Anabas testudineus TaxID=64144 RepID=A0A3Q1JBV0_ANATE) HSP 1 Score: 55.1 bits (131), Expect = 2.750e-5 Identity = 29/107 (27.10%), Postives = 55/107 (51.40%), Query Frame = 1 Query: 220 LDAIVFRNFYCSHITIKRRRQHFDPVPTATSTAAAGGVDGDPWVTILRDRPLMENPHHEDDAQYWHVVTADEFDREEYDAESTAPLRIYLYQPSPMWKAIELHHVKV 540 ++ I F+N+Y +++T++ R+ +P + A W T+LRD PLM+NPH E +Q ++ + + + + + +R+ L QPS W L +K+ Sbjct: 47 IEEITFKNYYTAYVTVRLLRR----LPGQDAPAK--------WCTVLRDLPLMDNPHTEQGSQDYYSLHRTQM---QVEPDHVVSVRLILRQPSSAWLTFSLEEIKM 138
BLAST of mRNA_L-elsbetiae_contig10164.216.1 vs. uniprot
Match: A0A6A5BXG1_NAEFO (Uncharacterized protein n=2 Tax=Naegleria TaxID=5761 RepID=A0A6A5BXG1_NAEFO) HSP 1 Score: 53.1 bits (126), Expect = 6.720e-5 Identity = 34/97 (35.05%), Postives = 49/97 (50.52%), Query Frame = 1 Query: 229 IVFRNFYCSHITIKRRRQHFDPVPTATSTAAAGGVDGDPWVTILRDRPLMENPHHEDDAQ-YWHVVTADEFDREEYDAESTAPLRIYLYQPSPMWKA 516 I+FRN+YCSHITIK + Q+ G ++T+L LMEN ++E+D+Q Y + +F+ LR Y YQ SP WK+ Sbjct: 40 IIFRNYYCSHITIKYKAQN--------------GT----FITLLSKYQLMENANYENDSQNYVRINCGKDFNSNYKKDMQFNNLRFYYYQTSPNWKS 118 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10164.216.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10164.216.1 >prot_L-elsbetiae_contig10164.216.1 ID=prot_L-elsbetiae_contig10164.216.1|Name=mRNA_L-elsbetiae_contig10164.216.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=110bp MENPHHEDDAQYWHVVTADEFDREEYDAESTAPLRIYLYQPSPMWKAIELback to top mRNA from alignment at L-elsbetiae_contig10164:2335..3399+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10164.216.1 ID=mRNA_L-elsbetiae_contig10164.216.1|Name=mRNA_L-elsbetiae_contig10164.216.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1065bp|location=Sequence derived from alignment at L-elsbetiae_contig10164:2335..3399+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10164:2335..3399+ >mRNA_L-elsbetiae_contig10164.216.1 ID=mRNA_L-elsbetiae_contig10164.216.1|Name=mRNA_L-elsbetiae_contig10164.216.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=660bp|location=Sequence derived from alignment at L-elsbetiae_contig10164:2335..3399+ (Laminarionema elsbetiae ELsaHSoW15)back to top |